Include more progress bars

[teutoburg]

This simply adds some tqdm wrappers around some of our main loops. Doesn't speed things up, but at least we'll have a better idea about how far it is. Also has the nice benefit of providing a total elapsed time (per loop).

[codecov]

Codecov Report

Attention: 1 lines in your changes are missing coverage. Please review.

Comparison is base (8c4a18b) 80.32% compared to head (77fa8d6) 80.32%.

Files	Patch %	Lines
scopesim/effects/spectral_trace_list.py	50.00%	1 Missing ⚠️

Additional details and impacted files

@@             Coverage Diff             @@
##           dev_master     #311   +/-   ##
===========================================
  Coverage       80.32%   80.32%           
===========================================
  Files             148      148           
  Lines           14902    14904    +2     
===========================================
+ Hits            11970    11972    +2     
  Misses           2932     2932           

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[hugobuddel]

Great!

Looks like rectify_traces() is not covered by tests, which we should do at some point. But it is in one of the notebooks, which is good enough now.