Skip to content

Latest commit

 

History

History
68 lines (55 loc) · 1.77 KB

README.md

File metadata and controls

68 lines (55 loc) · 1.77 KB
Raw

FunCode

This package provides various utilities for file manipulation and plotting simple statistics. It includes functions to handle encrypted Excel files, manipulate DataFrames, and generate plots.

Table of Contents

Installation

To install the package, you can clone the repository:

git clone https://github.com/Anacristina0914/FunCode.git
cd FunCode
pip install -e .

Usage

from FunCode import matching, plotting
matching.function_name(args*)
plotting.function_name(args*)

modules

Functions on each module.

plotting

  • plot_plate_positions
  • make_barplot_sample_dist
  • make_barplot_sample_dist_twogroups

matching

  • make_excel_combinations
  • convert_num_toexcel_col
  • find_non_identical_columns
  • hamming_distance
  • find_similar_identifiers
  • find_non_identical_columns
  • get_keypass_password
  • read_encrypted_excel
  • map_str_to_value
  • rename_columns
  • sex_from_pn
  • apply_sex_from_pn

Examples

from FunCode import matching, plotting

# See all arguments for a function
help(module.function_name)

# Read encrypted excel file using pw database and a key file
encrypted_excel = matching.read_encrypted_excel(pwd_db_path=pw_db, pw_file=pw_file, key_file_path=key_path,
                                                           file_path=database_dir, file_name=sle_fulldb_name)
# Plot sample dist using a column in a df
barplot_colname = plotting.make_barplot_sample_dist(db, group_col="col_name", plot_title="sample dist col_name", 
                                    y_axis_title="counts", x_axis_title="")