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Update README
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jluebeck committed Feb 11, 2025
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![AmpliconSuite-pipeline logo](https://github.com/AmpliconSuite/AmpliconSuite-pipeline/blob/master/images/AmpliconSuite-pipeline.png)
![GitHub release (latest by date)](https://img.shields.io/github/v/release/AmpliconSuite/AmpliconSuite-pipeline)
[![Docker Image Version (latest by date)](https://img.shields.io/docker/v/jluebeck/prepareaa?logo=docker)](https://hub.docker.com/r/jluebeck/prepareaa)
[![Docker pulls](https://img.shields.io/docker/pulls/jluebeck/prepareaa?logo=docker)]((https://hub.docker.com/r/jluebeck/prepareaa))
[![Docker Image Version (latest by date)](https://img.shields.io/docker/v/jluebeck/ampliconsuite-pipeline?logo=docker)](https://hub.docker.com/r/jluebeck/ampliconsuite-pipeline)
[![Docker pulls](https://img.shields.io/docker/pulls/jluebeck/ampliconsuite-pipeline?logo=docker)]((https://hub.docker.com/r/jluebeck/ampliconsuite-pipeline))
[![Singularity](https://img.shields.io/badge/singularity-available-blue)](https://cloud.sylabs.io/library/jluebeck/ampliconsuite-pipeline/ampliconsuite-pipeline)
[![Conda](https://img.shields.io/conda/dn/bioconda/ampliconsuite?logo=Anaconda)](https://anaconda.org/bioconda/ampliconsuite)

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- **Docker**:
* Docker installation: https://docs.docker.com/install/
* Pull the docker image: `docker pull jluebeck/prepareaa`
* Pull the docker image: `docker pull jluebeck/ampliconsuite-pipeline`

* (Optional): Add user to the docker group:
`sudo usermod -a -G docker $USER` (log out and back in after performing).
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