v0.5.1
- bugfixes to AmpRepo table generation
- add hybrid viral classification ("Virus") for GRCh38_viral samples
- improve classification of hybrid-human viral ecDNA
- enforce a minimum size on total size focally amplified BFB regions (20kbp)
- renames classification "Linear amplification" to "Linear" and "Complex non-cyclic" to "Complex-non-cyclic" to remove spaces from class names.
- warn users if
--ref
arg appears swapped between GRCh37 and hg19.