Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Support 18048 integration test for complete full genome workflow #99

Open
wants to merge 12 commits into
base: dev
Choose a base branch
from

Conversation

PoffM
Copy link
Contributor

@PoffM PoffM commented Nov 28, 2019

No description provided.

PoffM added 12 commits October 29, 2019 17:25
-Updated dbi jars.
-Added Library Pool and Content repositories.
-Aded new field to StepResourceDto.
-Updated jars.
-Added name field to LibraryPrepBatchDto.
-Added ValidationExceptionMapper for javax ValidationExceptions.
-Added initial validation for unique index sets when adding a new
LibraryPoolContent.
-Updated dbi jars.
-Added tests for LibraryPoolContentRepository's error handling for
duplicate IndexSets and LibraryPrepBatchs.
-Added new fields to LibraryPoolDto and LibraryPrepBatchDto
workflow

https://redmine.biodiversity.agr.gc.ca/issues/18048

-Updated jars.
-Began writing WGS test. Currently fails when adding StepResources
because hibernate-types seems to be unable to deserialize enums
(StepResourceValue) from the database when using h2.
workflow

https://redmine.biodiversity.agr.gc.ca/issues/18048

-Added the rest of the workflow.
-Added delete methods to afterwards step backwards through the workflow
and delete all the created data.
-Renamed the test to ...IT.
-The test only works with postgres because of enum fields.
-Updated dbi jars.
-Fixed tests; let well row and column format validations be handled by
the entity validation.
-Removed unused import.
-Removed region field from StepResourceDto.
Support_18048_Integration_test_for_complete_Full_Genome_workflow

Conflicts:
	lib/seqdb.dbi-3.37-SNAPSHOT-test-support.jar
	lib/seqdb.dbi-3.37-SNAPSHOT.jar
-Removed unnecessary stepResource type attributes from POST requests.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant