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template.tex
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\documentclass{article}
\usepackage{biorxiv} % github.com/alexsbaldwin/biorxiv-inspired-latex-style
\usepackage[utf8]{inputenc} % allow utf-8 input
\usepackage[T1]{fontenc} % use 8-bit T1 fonts
\usepackage{hyperref} % hyperlinks
\usepackage{url} % simple URL typesetting
\usepackage{booktabs} % professional-quality tables
\usepackage{amsfonts} % blackboard math symbols
\usepackage{nicefrac} % compact symbols for 1/2, etc.
\usepackage{microtype} % microtypography
\usepackage{lipsum} % Can be removed after putting your text content
\usepackage{lineno}
\linenumbers
\title{A template for \textbf{\textup{bio\textcolor{biorxivred}{R}$\chi$iv}} submissions}
%\date{September 9, 1985} % Here you can change the date presented in the paper title
%\date{} % Or removing it
\author{
David S.~Hippocampus\thanks{Use footnote for providing further
information about author (webpage, alternative
address)---\emph{not} for acknowledging funding agencies.} \\
Department of Computer Science\\
Cranberry-Lemon University\\
Pittsburgh, PA 15213 \\
\texttt{[email protected]} \\
%% examples of more authors
\And
Elias D.~Striatum \\
Department of Electrical Engineering\\
Mount-Sheikh University\\
Santa Narimana, Levand \\
\texttt{[email protected]} \\
%% \AND
%% Coauthor \\
%% Affiliation \\
%% Address \\
%% \texttt{email} \\
%% \And
%% Coauthor \\
%% Affiliation \\
%% Address \\
%% \texttt{email} \\
%% \And
%% Coauthor \\
%% Affiliation \\
%% Address \\
%% \texttt{email} \\
}
% Uncomment to override the `A preprint' in the header
%\renewcommand{\headeright}{}
\begin{document}
\maketitle
\begin{abstract}
\lipsum[1]
\end{abstract}
% keywords can be removed
\keywords{First keyword \and Second keyword \and More}
\section{Introduction}
\lipsum[2]
\lipsum[3]
\section{Headings: first level}
\label{sec:headings}
\lipsum[4] See Section \ref{sec:headings}.
\subsection{Headings: second level}
\lipsum[5]
\begin{equation}
\xi _{ij}(t)=P(x_{t}=i,x_{t+1}=j|y,v,w;\theta)= {\frac {\alpha _{i}(t)a^{w_t}_{ij}\beta _{j}(t+1)b^{v_{t+1}}_{j}(y_{t+1})}{\sum _{i=1}^{N} \sum _{j=1}^{N} \alpha _{i}(t)a^{w_t}_{ij}\beta _{j}(t+1)b^{v_{t+1}}_{j}(y_{t+1})}}
\end{equation}
\subsubsection{Headings: third level}
\lipsum[6]
\paragraph{Paragraph}
\lipsum[7]
\section{Examples of citations, figures, tables, references}
\label{sec:others}
We can cite in parentheses \citep{Tanner1954,Peterson1954} or directly: \cite{Gregory1955}.
\subsection{Figures}
\lipsum[10]
See Figure \ref{fig:fig1}. Here is how you add footnotes. \footnote{Sample of the first footnote.}
\lipsum[11]
\begin{figure}
\centering
\fbox{\rule[-.5cm]{4cm}{4cm} \rule[-.5cm]{4cm}{0cm}}
\caption{Sample figure caption.}
\label{fig:fig1}
\end{figure}
\subsection{Tables}
\lipsum[12]
See awesome Table~\ref{tab:table}.
\begin{table}
\caption{Sample table title}
\centering
\begin{tabular}{lll}
\toprule
\multicolumn{2}{c}{Part} \\
\cmidrule(r){1-2}
Name & Description & Size ($\mu$m) \\
\midrule
Dendrite & Input terminal & $\sim$100 \\
Axon & Output terminal & $\sim$10 \\
Soma & Cell body & up to $10^6$ \\
\bottomrule
\end{tabular}
\label{tab:table}
\end{table}
\subsection{Lists}
\begin{itemize}
\item Lorem ipsum dolor sit amet
\item consectetur adipiscing elit.
\item Aliquam dignissim blandit est, in dictum tortor gravida eget. In ac rutrum magna.
\end{itemize}
\bibliographystyle{apalike}
\bibliography{references} % uses external references.bib file
\end{document}