diff --git a/noodles-bam/CHANGELOG.md b/noodles-bam/CHANGELOG.md index a671c7977..804e3bed9 100644 --- a/noodles-bam/CHANGELOG.md +++ b/noodles-bam/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.74.0 - 2025-01-23 + +### Changed + + * bam: Sync dependencies. + ## 0.73.0 - 2025-01-19 ### Added diff --git a/noodles-bam/Cargo.toml b/noodles-bam/Cargo.toml index 3e09675c6..7ab5306d1 100644 --- a/noodles-bam/Cargo.toml +++ b/noodles-bam/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bam" -version = "0.73.0" +version = "0.74.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -24,12 +24,12 @@ tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0" } noodles-core = { path = "../noodles-core", version = "0.16.0" } -noodles-csi = { path = "../noodles-csi", version = "0.42.0" } -noodles-sam = { path = "../noodles-sam", version = "0.69.0" } +noodles-csi = { path = "../noodles-csi", version = "0.43.0" } +noodles-sam = { path = "../noodles-sam", version = "0.70.0" } [dev-dependencies] flate2.workspace = true -noodles-sam = { path = "../noodles-sam", version = "0.69.0", features = ["async"] } +noodles-sam = { path = "../noodles-sam", version = "0.70.0", features = ["async"] } tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] } [package.metadata.docs.rs] diff --git a/noodles-bcf/CHANGELOG.md b/noodles-bcf/CHANGELOG.md index 496449ace..925f405a9 100644 --- a/noodles-bcf/CHANGELOG.md +++ b/noodles-bcf/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.68.0 - 2025-01-23 + +### Changed + + * bcf: Sync dependencies. + ## 0.67.0 - 2025-01-19 ### Added diff --git a/noodles-bcf/Cargo.toml b/noodles-bcf/Cargo.toml index 0aa3f975c..44eda9e3c 100644 --- a/noodles-bcf/Cargo.toml +++ b/noodles-bcf/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bcf" -version = "0.67.0" +version = "0.68.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -26,8 +26,8 @@ indexmap.workspace = true memchr.workspace = true noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0" } noodles-core = { path = "../noodles-core", version = "0.16.0" } -noodles-csi = { path = "../noodles-csi", version = "0.42.0" } -noodles-vcf = { path = "../noodles-vcf", version = "0.71.0" } +noodles-csi = { path = "../noodles-csi", version = "0.43.0" } +noodles-vcf = { path = "../noodles-vcf", version = "0.72.0" } futures = { workspace = true, optional = true, features = ["std"] } pin-project-lite = { workspace = true, optional = true } diff --git a/noodles-bed/CHANGELOG.md b/noodles-bed/CHANGELOG.md index 23bacacda..b9f1b7892 100644 --- a/noodles-bed/CHANGELOG.md +++ b/noodles-bed/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.20.0 - 2025-01-23 + +### Changed + + * bed: Sync dependencies. + ## 0.19.0 - 2025-01-19 ### Changed diff --git a/noodles-bed/Cargo.toml b/noodles-bed/Cargo.toml index ebb87fe87..544807ffc 100644 --- a/noodles-bed/Cargo.toml +++ b/noodles-bed/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-bed" -version = "0.19.0" +version = "0.20.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -18,5 +18,5 @@ noodles-core = { path = "../noodles-core", version = "0.16.0" } [dev-dependencies] noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0" } -noodles-csi = { path = "../noodles-csi", version = "0.42.0" } -noodles-tabix = { path = "../noodles-tabix", version = "0.48.0" } +noodles-csi = { path = "../noodles-csi", version = "0.43.0" } +noodles-tabix = { path = "../noodles-tabix", version = "0.49.0" } diff --git a/noodles-cram/CHANGELOG.md b/noodles-cram/CHANGELOG.md index 8db3cbef2..729b56e08 100644 --- a/noodles-cram/CHANGELOG.md +++ b/noodles-cram/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.75.0 - 2025-01-23 + +### Changed + + * cram: Sync dependencies. + ## 0.74.0 - 2025-01-19 ### Added diff --git a/noodles-cram/Cargo.toml b/noodles-cram/Cargo.toml index 5458c2851..cd8099d94 100644 --- a/noodles-cram/Cargo.toml +++ b/noodles-cram/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-cram" -version = "0.74.0" +version = "0.75.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -23,10 +23,10 @@ bzip2 = "0.5.0" flate2.workspace = true indexmap.workspace = true md-5 = "0.10.0" -noodles-bam = { path = "../noodles-bam", version = "0.73.0" } +noodles-bam = { path = "../noodles-bam", version = "0.74.0" } noodles-core = { path = "../noodles-core", version = "0.16.0" } noodles-fasta = { path = "../noodles-fasta", version = "0.47.0" } -noodles-sam = { path = "../noodles-sam", version = "0.69.0" } +noodles-sam = { path = "../noodles-sam", version = "0.70.0" } xz2 = "0.1.6" async-compression = { version = "0.4.0", optional = true, features = ["gzip", "tokio"] } @@ -37,7 +37,7 @@ tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } libdeflater = { workspace = true, optional = true } [dev-dependencies] -noodles-sam = { path = "../noodles-sam", version = "0.69.0", features = ["async"] } +noodles-sam = { path = "../noodles-sam", version = "0.70.0", features = ["async"] } tokio = { workspace = true, features = ["io-std", "macros", "rt-multi-thread"] } [package.metadata.docs.rs] diff --git a/noodles-csi/CHANGELOG.md b/noodles-csi/CHANGELOG.md index 2effa6eb9..e3f7b87f4 100644 --- a/noodles-csi/CHANGELOG.md +++ b/noodles-csi/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.43.0 - 2025-01-23 ### Fixed diff --git a/noodles-csi/Cargo.toml b/noodles-csi/Cargo.toml index 5fcc6d239..464818c48 100644 --- a/noodles-csi/Cargo.toml +++ b/noodles-csi/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-csi" -version = "0.42.0" +version = "0.43.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true diff --git a/noodles-gff/CHANGELOG.md b/noodles-gff/CHANGELOG.md index abd189f1e..041740366 100644 --- a/noodles-gff/CHANGELOG.md +++ b/noodles-gff/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.43.0 - 2025-01-23 + +### Changed + + * gff: Sync dependencies. + ## 0.42.0 - 2025-01-19 ### Changed diff --git a/noodles-gff/Cargo.toml b/noodles-gff/Cargo.toml index e52b8db40..42f72edb0 100644 --- a/noodles-gff/Cargo.toml +++ b/noodles-gff/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-gff" -version = "0.42.0" +version = "0.43.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -17,7 +17,7 @@ async = ["dep:futures", "dep:tokio"] indexmap.workspace = true noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0" } noodles-core = { path = "../noodles-core", version = "0.16.0" } -noodles-csi = { path = "../noodles-csi", version = "0.42.0" } +noodles-csi = { path = "../noodles-csi", version = "0.43.0" } percent-encoding.workspace = true futures = { workspace = true, optional = true, features = ["std"] } diff --git a/noodles-gtf/CHANGELOG.md b/noodles-gtf/CHANGELOG.md index 3532c6503..c64e5c373 100644 --- a/noodles-gtf/CHANGELOG.md +++ b/noodles-gtf/CHANGELOG.md @@ -1,6 +1,6 @@ # Changelog -## Unreleased +## 0.37.0 - 2025-01-23 ### Added diff --git a/noodles-gtf/Cargo.toml b/noodles-gtf/Cargo.toml index 861c3066e..ba62d66c0 100644 --- a/noodles-gtf/Cargo.toml +++ b/noodles-gtf/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-gtf" -version = "0.36.0" +version = "0.37.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -13,4 +13,4 @@ documentation = "https://docs.rs/noodles-gtf" [dependencies] noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0" } noodles-core = { path = "../noodles-core", version = "0.16.0" } -noodles-csi = { path = "../noodles-csi", version = "0.42.0" } +noodles-csi = { path = "../noodles-csi", version = "0.43.0" } diff --git a/noodles-sam/CHANGELOG.md b/noodles-sam/CHANGELOG.md index 8cfcf566d..24fd9496b 100644 --- a/noodles-sam/CHANGELOG.md +++ b/noodles-sam/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.70.0 - 2025-01-23 + +### Changed + + * sam: Sync dependencies. + ## 0.69.0 - 2025-01-19 ### Changed diff --git a/noodles-sam/Cargo.toml b/noodles-sam/Cargo.toml index 26d4dbcb3..b65ec59a8 100644 --- a/noodles-sam/Cargo.toml +++ b/noodles-sam/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-sam" -version = "0.69.0" +version = "0.70.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -27,7 +27,7 @@ lexical-core.workspace = true memchr.workspace = true noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0" } noodles-core = { path = "../noodles-core", version = "0.16.0" } -noodles-csi = { path = "../noodles-csi", version = "0.42.0" } +noodles-csi = { path = "../noodles-csi", version = "0.43.0" } futures = { workspace = true, optional = true, features = ["std"] } pin-project-lite = { workspace = true, optional = true } diff --git a/noodles-tabix/CHANGELOG.md b/noodles-tabix/CHANGELOG.md index 510352621..8220d2f91 100644 --- a/noodles-tabix/CHANGELOG.md +++ b/noodles-tabix/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.49.0 - 2025-01-23 + +### Changed + + * tabix: Sync dependencies. + ## 0.48.0 - 2025-01-19 ### Changed diff --git a/noodles-tabix/Cargo.toml b/noodles-tabix/Cargo.toml index d63f40eb6..f0e8c7e0f 100644 --- a/noodles-tabix/Cargo.toml +++ b/noodles-tabix/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-tabix" -version = "0.48.0" +version = "0.49.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -18,7 +18,7 @@ byteorder.workspace = true indexmap.workspace = true noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0" } noodles-core = { path = "../noodles-core", version = "0.16.0" } -noodles-csi = { path = "../noodles-csi", version = "0.42.0" } +noodles-csi = { path = "../noodles-csi", version = "0.43.0" } tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } diff --git a/noodles-util/CHANGELOG.md b/noodles-util/CHANGELOG.md index e6d27a95b..aef3409c2 100644 --- a/noodles-util/CHANGELOG.md +++ b/noodles-util/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.59.0 - 2025-01-23 + +### Changed + + * util: Sync dependencies. + ## 0.58.0 - 2025-01-19 ### Changed diff --git a/noodles-util/Cargo.toml b/noodles-util/Cargo.toml index 7819a5add..51dbfd7ef 100644 --- a/noodles-util/Cargo.toml +++ b/noodles-util/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-util" -version = "0.58.0" +version = "0.59.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -40,15 +40,15 @@ variant = [ [dependencies] flate2 = { workspace = true } -noodles-bam = { path = "../noodles-bam", version = "0.73.0", optional = true } -noodles-bcf = { path = "../noodles-bcf", version = "0.67.0", optional = true } +noodles-bam = { path = "../noodles-bam", version = "0.74.0", optional = true } +noodles-bcf = { path = "../noodles-bcf", version = "0.68.0", optional = true } noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0", optional = true } noodles-core = { path = "../noodles-core", version = "0.16.0", optional = true } -noodles-cram = { path = "../noodles-cram", version = "0.74.0", optional = true } -noodles-csi = { path = "../noodles-csi", version = "0.42.0", optional = true } +noodles-cram = { path = "../noodles-cram", version = "0.75.0", optional = true } +noodles-csi = { path = "../noodles-csi", version = "0.43.0", optional = true } noodles-fasta = { path = "../noodles-fasta", version = "0.47.0", optional = true } -noodles-sam = { path = "../noodles-sam", version = "0.69.0", optional = true } -noodles-vcf = { path = "../noodles-vcf", version = "0.71.0", optional = true } +noodles-sam = { path = "../noodles-sam", version = "0.70.0", optional = true } +noodles-vcf = { path = "../noodles-vcf", version = "0.72.0", optional = true } futures = { workspace = true, optional = true, features = ["std"] } tokio = { workspace = true, optional = true, features = ["fs", "io-util"] } diff --git a/noodles-vcf/CHANGELOG.md b/noodles-vcf/CHANGELOG.md index b213a0fd7..c40485357 100644 --- a/noodles-vcf/CHANGELOG.md +++ b/noodles-vcf/CHANGELOG.md @@ -1,5 +1,11 @@ # Changelog +## 0.72.0 - 2025-01-23 + +### Changed + + * vcf: Sync dependencies. + ## 0.71.0 - 2025-01-19 ### Changed diff --git a/noodles-vcf/Cargo.toml b/noodles-vcf/Cargo.toml index 4e37e65f2..5de911071 100644 --- a/noodles-vcf/Cargo.toml +++ b/noodles-vcf/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles-vcf" -version = "0.71.0" +version = "0.72.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -18,8 +18,8 @@ indexmap.workspace = true memchr.workspace = true noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0" } noodles-core = { path = "../noodles-core", version = "0.16.0" } -noodles-csi = { path = "../noodles-csi", version = "0.42.0" } -noodles-tabix = { path = "../noodles-tabix", version = "0.48.0" } +noodles-csi = { path = "../noodles-csi", version = "0.43.0" } +noodles-tabix = { path = "../noodles-tabix", version = "0.49.0" } percent-encoding.workspace = true futures = { workspace = true, optional = true, features = ["std"] } diff --git a/noodles/CHANGELOG.md b/noodles/CHANGELOG.md index 04c7125c9..c00ee0c2f 100644 --- a/noodles/CHANGELOG.md +++ b/noodles/CHANGELOG.md @@ -1,5 +1,19 @@ # Changelog +## 0.89.0 - 2025-01-23 + + * [noodles-bam 0.74.0](https://github.com/zaeleus/noodles/blob/noodles-bam-0.74.0/noodles-bam/CHANGELOG.md) + * [noodles-bcf 0.68.0](https://github.com/zaeleus/noodles/blob/noodles-bcf-0.68.0/noodles-bcf/CHANGELOG.md) + * [noodles-bed 0.20.0](https://github.com/zaeleus/noodles/blob/noodles-bed-0.20.0/noodles-bed/CHANGELOG.md) + * [noodles-cram 0.75.0](https://github.com/zaeleus/noodles/blob/noodles-cram-0.75.0/noodles-cram/CHANGELOG.md) + * [noodles-csi 0.43.0](https://github.com/zaeleus/noodles/blob/noodles-csi-0.43.0/noodles-csi/CHANGELOG.md) + * [noodles-gff 0.43.0](https://github.com/zaeleus/noodles/blob/noodles-gff-0.43.0/noodles-gff/CHANGELOG.md) + * [noodles-gtf 0.37.0](https://github.com/zaeleus/noodles/blob/noodles-gtf-0.37.0/noodles-gtf/CHANGELOG.md) + * [noodles-sam 0.70.0](https://github.com/zaeleus/noodles/blob/noodles-sam-0.70.0/noodles-sam/CHANGELOG.md) + * [noodles-tabix 0.49.0](https://github.com/zaeleus/noodles/blob/noodles-tabix-0.49.0/noodles-tabix/CHANGELOG.md) + * [noodles-util 0.59.0](https://github.com/zaeleus/noodles/blob/noodles-util-0.59.0/noodles-util/CHANGELOG.md) + * [noodles-vcf 0.72.0](https://github.com/zaeleus/noodles/blob/noodles-vcf-0.72.0/noodles-vcf/CHANGELOG.md) + ## 0.88.0 - 2025-01-19 * [noodles-bam 0.73.0](https://github.com/zaeleus/noodles/blob/noodles-bam-0.73.0/noodles-bam/CHANGELOG.md) diff --git a/noodles/Cargo.toml b/noodles/Cargo.toml index 8e2333ebc..0acbfe2bd 100644 --- a/noodles/Cargo.toml +++ b/noodles/Cargo.toml @@ -1,6 +1,6 @@ [package] name = "noodles" -version = "0.88.0" +version = "0.89.0" authors = ["Michael Macias "] license.workspace = true edition.workspace = true @@ -12,22 +12,22 @@ documentation = "https://docs.rs/noodles" readme = "../README.md" [dependencies] -noodles-bam = { path = "../noodles-bam", version = "0.73.0", optional = true } -noodles-bcf = { path = "../noodles-bcf", version = "0.67.0", optional = true } -noodles-bed = { path = "../noodles-bed", version = "0.19.0", optional = true } +noodles-bam = { path = "../noodles-bam", version = "0.74.0", optional = true } +noodles-bcf = { path = "../noodles-bcf", version = "0.68.0", optional = true } +noodles-bed = { path = "../noodles-bed", version = "0.20.0", optional = true } noodles-bgzf = { path = "../noodles-bgzf", version = "0.35.0", optional = true } noodles-core = { path = "../noodles-core", version = "0.16.0", optional = true } -noodles-cram = { path = "../noodles-cram", version = "0.74.0", optional = true } -noodles-csi = { path = "../noodles-csi", version = "0.42.0", optional = true } +noodles-cram = { path = "../noodles-cram", version = "0.75.0", optional = true } +noodles-csi = { path = "../noodles-csi", version = "0.43.0", optional = true } noodles-fasta = { path = "../noodles-fasta", version = "0.47.0", optional = true } noodles-fastq = { path = "../noodles-fastq", version = "0.17.0", optional = true } -noodles-gff = { path = "../noodles-gff", version = "0.42.0", optional = true } -noodles-gtf = { path = "../noodles-gtf", version = "0.36.0", optional = true } +noodles-gff = { path = "../noodles-gff", version = "0.43.0", optional = true } +noodles-gtf = { path = "../noodles-gtf", version = "0.37.0", optional = true } noodles-htsget = { path = "../noodles-htsget", version = "0.7.0", optional = true } noodles-refget = { path = "../noodles-refget", version = "0.6.0", optional = true } -noodles-sam = { path = "../noodles-sam", version = "0.69.0", optional = true } -noodles-tabix = { path = "../noodles-tabix", version = "0.48.0", optional = true } -noodles-vcf = { path = "../noodles-vcf", version = "0.71.0", optional = true } +noodles-sam = { path = "../noodles-sam", version = "0.70.0", optional = true } +noodles-tabix = { path = "../noodles-tabix", version = "0.49.0", optional = true } +noodles-vcf = { path = "../noodles-vcf", version = "0.72.0", optional = true } [features] default = []