graph.h

#include <iostream>
#include <fstream>
#include <stdlib.h>
#include "parallel.h"
using namespace std;

// **************************************************************
//    ADJACENCY ARRAY REPRESENTATION
// **************************************************************

struct symmetricVertex {
    intE* neighbors;
    intT degree;
    intT fakeDegree;
    void del() {free(neighbors); }
    symmetricVertex(intE* n, intT d) : neighbors(n), degree(d) {}
    uintE getInNeighbor(intT j) { return neighbors[j]; }
    uintE getOutNeighbor(intT j) { return neighbors[j]; }
    intE* getInNeighborPtr() { return neighbors;}
    intE* getOutNeighborPtr() { return neighbors;}
    intT getInDegree() { return degree; }
    intT getOutDegree() { return degree; }
    intT getFakeInDegree() { return fakeDegree;}
    intT getFakeDegree() { return fakeDegree; }
    void setInNeighbors(intE* _i) { neighbors = _i; }
    void setOutNeighbors(intE* _i) { neighbors = _i; }
    void setInDegree(intT _d) { degree = _d; }
    void setOutDegree(intT _d) { degree = _d; }
    void setFakeDegree(intT _d) { fakeDegree = _d; }
    void setFakeInDegree(intT _d) { fakeDegree = _d; }
    void flipEdges() {}
};

struct asymmetricVertex {
    intE* inNeighbors;
    intE* outNeighbors;
    intT outDegree;
    intT fakeInDegree;
    intT fakeOutDegree;
    intT inDegree;
    void del() {free(inNeighbors); free(outNeighbors);}
    asymmetricVertex(intE* iN, intE* oN, intT id, intT od) : inNeighbors(iN), outNeighbors(oN), inDegree(id), outDegree(od) {}
    uintE getInNeighbor(intT j) { return inNeighbors[j]; }
    uintE getOutNeighbor(intT j) { return outNeighbors[j]; }
    intE* getInNeighborPtr() { return inNeighbors;}
    intE* getOutNeighborPtr() { return outNeighbors;}
    intT getInDegree() { return inDegree; }
    intT getOutDegree() { return outDegree; }
    intT getFakeInDegree() { return fakeInDegree;}
    intT getFakeDegree() { return fakeOutDegree; }
    void setInNeighbors(intE* _i) { inNeighbors = _i; }
    void setOutNeighbors(intE* _i) { outNeighbors = _i; }
    void setInDegree(intT _d) { inDegree = _d; }
    void setOutDegree(intT _d) { outDegree = _d; }
    void setFakeDegree(intT _d) { fakeOutDegree = _d; }
    void setFakeInDegree(intT _d) { fakeInDegree = _d; }
    void flipEdges() { swap(inNeighbors,outNeighbors); swap(inDegree,outDegree); }
};

template <class vertex>
struct graph {
    vertex *V;
    intT n;
    uintT m;
    intE* allocatedInplace;
    intE* inEdges;
    intT* flags;
    graph(vertex* VV, intT nn, uintT mm) 
	: V(VV), n(nn), m(mm), allocatedInplace(NULL), flags(NULL) {}
    graph(vertex* VV, intT nn, uintT mm, intE* ai, intE* _inEdges = NULL) 
	: V(VV), n(nn), m(mm), allocatedInplace(ai), inEdges(_inEdges), flags(NULL) {}
    void del() {
	if (flags != NULL) free(flags);
	if (allocatedInplace == NULL) 
	    for (intT i=0; i < n; i++) V[i].del();
	else free(allocatedInplace);
	free(V);
	if(inEdges != NULL) free(inEdges);
    }
    void transpose() {
	if(sizeof(vertex) == sizeof(asymmetricVertex)) {
	    parallel_for(intT i=0;i<n;i++) {
		V[i].flipEdges();
	    }
	} 
    }
};

struct symmetricWghVertex {
    //weights are stored in the entry after the neighbor ID
    //so size of neighbor list is twice the degree
    intE* neighbors; 
    intT degree;
    intT fakeDegree;
    void del() {free(neighbors);}
    symmetricWghVertex(intE* n, intT d) : neighbors(n), degree(d) {}
    intE getInNeighbor(intT j) { return neighbors[2*j]; }
    intE getOutNeighbor(intT j) { return neighbors[2*j]; }
    intE* getInNeighborPtr() { return neighbors;}
    intE* getOutNeighborPtr() { return neighbors;}
    intE getInWeight(intT j) { return neighbors[2*j+1]; }
    intE getOutWeight(intT j) { return neighbors[2*j+1]; }
    intT getInDegree() { return degree; }
    intT getOutDegree() { return degree; }
    intT getFakeDegree() { return fakeDegree; }
    intT getFakeInDegree() { return fakeDegree; }
    void setInNeighbors(intE* _i) { neighbors = _i; }
    void setOutNeighbors(intE* _i) { neighbors = _i; }
    void setInDegree(intT _d) { degree = _d; }
    void setOutDegree(intT _d) { degree = _d; }
    void setFakeDegree(intT _d) { fakeDegree = _d; }
    void setFakeInDegree(intT _d) { fakeDegree = _d; }
};

struct asymmetricWghVertex {
    //weights are stored in the entry after the neighbor ID
    //so size of neighbor list is twice the degree
    intE* inNeighbors; 
    intE* outNeighbors;
    intT inDegree;
    intT outDegree;
    intT fakeOutDegree;
    intT fakeInDegree;
    void del() {free(inNeighbors); free(outNeighbors);}
    asymmetricWghVertex(intE* iN, intE* oN, intT id, intT od) : inNeighbors(iN), outNeighbors(oN), inDegree(id), outDegree(od) {}
    intE getInNeighbor(intT j) { return inNeighbors[2*j]; }
    intE getOutNeighbor(intT j) { return outNeighbors[2*j]; }
    intE* getInNeighborPtr() { return inNeighbors;}
    intE* getOutNeighborPtr() { return outNeighbors;}
    intE getInWeight(intT j) { return inNeighbors[2*j+1]; }
    intE getOutWeight(intT j) { return outNeighbors[2*j+1]; }
    intT getInDegree() { return inDegree; }
    intT getOutDegree() { return outDegree; }
    intT getFakeDegree() { return fakeOutDegree; }
    intT getFakeInDegree() { return fakeInDegree; }
    void setInNeighbors(intE* _i) { inNeighbors = _i; }
    void setOutNeighbors(intE* _i) { outNeighbors = _i; }
    void setInDegree(intT _d) { inDegree = _d; }
    void setOutDegree(intT _d) { outDegree = _d; }
    void setFakeDegree(intT _d) { fakeOutDegree = _d; }
    void setFakeInDegree(intT _d) { fakeInDegree = _d; }
};

template <class vertex>
struct wghGraph {
    vertex *V;
    intT n;
    uintT m;
    intE* allocatedInplace;
    intE* inEdges;
    intT* flags;
    wghGraph(vertex* VV, intT nn, uintT mm) 
	: V(VV), n(nn), m(mm), allocatedInplace(NULL), flags(NULL) {}
    wghGraph(vertex* VV, intT nn, uintT mm, intE* ai, intE* _inEdges=NULL) 
	: V(VV), n(nn), m(mm), allocatedInplace(ai), inEdges(_inEdges), flags(NULL) {}
    void del() {
	if(flags != NULL) free(flags);
	if (allocatedInplace == NULL) 
	    for (intT i=0; i < n; i++) V[i].del();
	else { free(allocatedInplace); }
	free(V);
	if(inEdges != NULL) free(inEdges);
    }
};