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DESCRIPTION
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DESCRIPTION
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Package: SynergyScreen
Type: Package
Title: Analyze and simulate synergy screen data
Version: 0.1.0
Date: 2015-04-14
Authors@R: person("Yury V", "Bukhman", email = "[email protected]",
role = c("aut", "cre"))
Description: SynergyScreen works with data from medium-throughput synergy
screens where multiple pairs of compounds are tested in microtiter plates
using simple single ray design.
License: file LICENSE
LazyLoad: yes
LazyData: yes
Depends:
R (>= 3.1.3),
BiocGenerics (>= 0.12.1),
methods (>= 3.1.3),
ggplot2
Imports:
RColorBrewer (>= 1.1-2),
scales,
reshape2
Suggests:
BiocStyle (>= 1.4.1),
knitr (>= 1.9),
rmarkdown (>= 0.5.1),
testthat
VignetteBuilder: knitr
Collate:
'Compound.R'
'CompoundList.R'
'DRE.R'
'DRE-accessors.R'
'DREList.R'
'Model.R'
'DRModel.R'
'Functions.R'
'ScreenData.R'
'ScreenDesign.R'
'SynergyData.R'
'SynergyExperiment.R'
'SynergyExperimentList.R'
'SynergyScreen.R'
'SynergyScreen-accessors.R'
'checkRange.R'
'computeSynergies.R'
'datasetAnnotations.R'
'designSummary.R'
'dreData.R'
'findSynergies.R'
'fit.R'
'generateDesign.R'
'labelledData.R'
'plotIsoboles.R'
'predict.R'
'simulate.R'
'transferTrueValues.R'
'writeWide.R'
RoxygenNote: 5.0.1