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Problems with QueryBrenda() #15

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gdejana opened this issue Apr 26, 2023 · 1 comment
Open

Problems with QueryBrenda() #15

gdejana opened this issue Apr 26, 2023 · 1 comment
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@gdejana
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gdejana commented Apr 26, 2023

I am getting problems when using a list of ECs in QueryBrenda().

It appears like all the numbers different from 1.1.1.1 are getting deleted as "invalid EC number(s)".

I tried to manually check on BRENDA if those number are indeed actually invalid but that is not the case (e.g. 1.1.1.262)...

Any inputs on how to solve this issue?

@gdejana gdejana added the bug Something isn't working label Apr 26, 2023
@y1zhou
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y1zhou commented Apr 30, 2023

Hi @gdejana , this package hasn't been maintained for a while. Recently I rewrote the parser in Python and fixed some bugs in the brendaDb parser, but haven't had time to backport to the R package yet. If you could provide a minimal example to reproduce your issue (code, data file, error message) then I may be able to identify the problem.

Repository owner deleted a comment from sweeper02 Feb 23, 2024
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