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The code of analyze and summarizing are not working #1

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sagittariushx opened this issue Nov 26, 2019 · 2 comments
Open

The code of analyze and summarizing are not working #1

sagittariushx opened this issue Nov 26, 2019 · 2 comments

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@sagittariushx
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Hi,
I'm using MMPS to deal with ABCD data, but there is nothing generated after I ran the code.
These are the error messages. May you help me to check what the problem is? Thank you so much!

Error message:
Unpacking fast-track tgz
reorgnizing fast-track data into orig and aux_incoming
ls: cannot access '/home/MMPS/data/fast-track/sub*/ses*//ABCD': No such file or directory
Finished

Tue Nov 26 06:00:31 UTC 2019 : summarize_rsBOLD_aparc2_var
Error using MMIL_Check_ProjID (line 139)
StudyInfo is empty

Error in MMIL_Compile_rsBOLD_ROI_Analysis>check_input (line 104)

Error in MMIL_Compile_rsBOLD_ROI_Analysis (line 72)

Error in ABCD_Summarize_rsBOLD_Analysis>compile_results (line 226)

Error in ABCD_Summarize_rsBOLD_Analysis (line 118)

Error in mmps_engine (line 47)

Tue Nov 26 06:00:46 UTC 2019 : summarize_taskBOLD
A dot name structure assignment is illegal when the structure is empty. Use a subscript on the structure.

@xfgavin
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xfgavin commented Dec 19, 2019

It seems the unpacking script didn't work.
Can you please list /home/MMPS/data/fast-track/?

@sagittariushx
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It seems the unpacking script didn't work.
Can you please list /home/MMPS/data/fast-track/?

I fix the problem. Some of the file didn't have the rs-fmri images, so it is not working for that subject. Otherwise, is it working on the minimal pre-processing images of ABCD 2.0.1?

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