diff --git a/src/cli.rs b/src/cli.rs index 6defca3..ddd547a 100644 --- a/src/cli.rs +++ b/src/cli.rs @@ -525,6 +525,7 @@ pub fn contig_full_help() -> Manual { &monospace_roff("--trim-max"))], &[&monospace_roff("coverage_histogram"), "Histogram of coverage depths"], + &[&monospace_roff("covered_fraction"), "Proportion of bases covered by 1 or more reads"], &[&monospace_roff("covered_bases"), "Number of bases covered by 1 or more reads"], &[&monospace_roff("variance"), "Variance of coverage depths"], &[&monospace_roff("length"), "Length of each contig in base pairs"], @@ -766,6 +767,7 @@ pub fn genome_full_help() -> Manual { &monospace_roff("--trim-min"), &monospace_roff("--trim-max"))], &[&monospace_roff("coverage_histogram"), "Histogram of coverage depths"], + &[&monospace_roff("covered_fraction"), "Proportion of bases covered by 1 or more reads"], &[&monospace_roff("covered_bases"), "Number of bases covered by 1 or more reads"], &[&monospace_roff("variance"), "Variance of coverage depths"], &[&monospace_roff("length"), "Length of each genome in base pairs"],