diff --git a/404.html b/404.html index 139c243..b4f2a8f 100644 --- a/404.html +++ b/404.html @@ -80,7 +80,7 @@
  • - + @@ -87,21 +87,21 @@

    Authors and Citation

    Citation

    - Source: DESCRIPTION + Source: DESCRIPTION

    Gamboa S (2024). taxPPro: Taxonomic and phylogenetic propagation for bugphyzz. -R package version 1.0.0, https://github.com/sdgamboa/taxPPro. +R package version 1.0.0, https://github.com/waldronlab/taxPPro. 

    @Manual{,
   title = {taxPPro: Taxonomic and phylogenetic propagation for bugphyzz},
   author = {Samuel Gamboa},
   year = {2024},
   note = {R package version 1.0.0},
-  url = {https://github.com/sdgamboa/taxPPro},
+  url = {https://github.com/waldronlab/taxPPro},
 }
    diff --git a/index.html b/index.html index f414e45..fbddc81 100644 --- a/index.html +++ b/index.html @@ -81,7 +81,7 @@
  • - + @@ -75,7 +75,7 @@

    Changelog

    - Source: NEWS.md + Source: NEWS.md
    diff --git a/pkgdown.yml b/pkgdown.yml index c6124b0..b65a74f 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -10,7 +10,7 @@ articles: taxPPro: taxPPro.html articles/uncertainty_binary: uncertainty_binary.html articles/uncertainty_multistate: uncertainty_multistate.html -last_built: 2024-11-21T18:17Z +last_built: 2024-11-21T18:18Z urls: reference: https://waldronlab.io/taxPPro/reference article: https://waldronlab.io/taxPPro/articles diff --git a/reference/addRankPrefix.html b/reference/addRankPrefix.html index 8c18c65..2492be0 100644 --- a/reference/addRankPrefix.html +++ b/reference/addRankPrefix.html @@ -60,7 +60,7 @@ Changelog
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    Add rank prefix to NCBI_ID

    - Source: R/utils.R + Source: R/utils.R
    diff --git a/reference/classif2Table.html b/reference/classif2Table.html index dbe4661..93f3011 100644 --- a/reference/classif2Table.html +++ b/reference/classif2Table.html @@ -61,7 +61,7 @@ Changelog
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    Taxize classification to data frame

    - Source: R/utils.R + Source: R/utils.R
    diff --git a/reference/completeBinaryData.html b/reference/completeBinaryData.html index 9dcdefe..4c26781 100644 --- a/reference/completeBinaryData.html +++ b/reference/completeBinaryData.html @@ -61,7 +61,7 @@ Changelog
  • - + @@ -76,7 +76,7 @@

    Complete binary data

    - Source: R/taxPPro.R + Source: R/taxPPro.R
    diff --git a/reference/conf2Fct.html b/reference/conf2Fct.html index d415921..0de4bab 100644 --- a/reference/conf2Fct.html +++ b/reference/conf2Fct.html @@ -61,7 +61,7 @@ Changelog
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    Confidence in curation to factor

    - Source: R/utils.R + Source: R/utils.R
    diff --git a/reference/filterData.html b/reference/filterData.html index edee44d..92af6ec 100644 --- a/reference/filterData.html +++ b/reference/filterData.html @@ -61,7 +61,7 @@ Changelog
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    Filter data

    - Source: R/taxPPro.R + Source: R/taxPPro.R
    diff --git a/reference/filterDataDiscrete.html b/reference/filterDataDiscrete.html index 58d1434..d763abd 100644 --- a/reference/filterDataDiscrete.html +++ b/reference/filterDataDiscrete.html @@ -62,7 +62,7 @@ Changelog
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    Filter data with discrete attributes

    - Source: R/taxPPro.R + Source: R/taxPPro.R
    diff --git a/reference/filterDataNumeric.html b/reference/filterDataNumeric.html index feb5a54..80f30d1 100644 --- a/reference/filterDataNumeric.html +++ b/reference/filterDataNumeric.html @@ -63,7 +63,7 @@ Changelog
  • - + @@ -78,7 +78,7 @@

    Filter data with numeric attributes

    - Source: R/taxPPro.R + Source: R/taxPPro.R
    diff --git a/reference/freq2Scores.html b/reference/freq2Scores.html index 283fc13..f9e18ad 100644 --- a/reference/freq2Scores.html +++ b/reference/freq2Scores.html @@ -62,7 +62,7 @@ Changelog
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    Frequency to scores

    - Source: R/utils.R + Source: R/utils.R
    diff --git a/reference/freq2Scores2.html b/reference/freq2Scores2.html index 97a1298..7279bb2 100644 --- a/reference/freq2Scores2.html +++ b/reference/freq2Scores2.html @@ -63,7 +63,7 @@ Changelog
  • - + @@ -78,7 +78,7 @@

    Frequency to scores 2

    - Source: R/utils.R + Source: R/utils.R
    diff --git a/reference/getDataReady.html b/reference/getDataReady.html index 8f775d8..8737813 100644 --- a/reference/getDataReady.html +++ b/reference/getDataReady.html @@ -60,7 +60,7 @@ Changelog
  • - + @@ -75,7 +75,7 @@

    Get data ready for propagation

    - Source: R/taxPPro.R + Source: R/taxPPro.R
    diff --git a/reference/getNsti.html b/reference/getNsti.html index d5323f3..3dceeb8 100644 --- a/reference/getNsti.html +++ b/reference/getNsti.html @@ -62,7 +62,7 @@ Changelog
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    Get NSTI

    - Source: R/trees.R + Source: R/trees.R
    diff --git a/reference/getSetWithIDs.html b/reference/getSetWithIDs.html index ad74de6..0616f3e 100644 --- a/reference/getSetWithIDs.html +++ b/reference/getSetWithIDs.html @@ -60,7 +60,7 @@ Changelog
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    Get set with IDs

    - Source: R/taxPPro.R + Source: R/taxPPro.R
    diff --git a/reference/getSetWithoutIDs.html b/reference/getSetWithoutIDs.html index cd0dcd7..29afba9 100644 --- a/reference/getSetWithoutIDs.html +++ b/reference/getSetWithoutIDs.html @@ -60,7 +60,7 @@ Changelog
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    Get set without IDs

    - Source: R/taxPPro.R + Source: R/taxPPro.R
    diff --git a/reference/index.html b/reference/index.html index 3c30184..ce7cc9e 100644 --- a/reference/index.html +++ b/reference/index.html @@ -60,7 +60,7 @@ Changelog
  • - + diff --git a/reference/ltp.html b/reference/ltp.html index 27a03c8..b238eb6 100644 --- a/reference/ltp.html +++ b/reference/ltp.html @@ -61,7 +61,7 @@ Changelog
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    Get living tree project (LTP) tree and data

    - Source: R/trees.R + Source: R/trees.R
    diff --git a/reference/nsti2Freq.html b/reference/nsti2Freq.html index 74040a6..6f5b5a2 100644 --- a/reference/nsti2Freq.html +++ b/reference/nsti2Freq.html @@ -60,7 +60,7 @@ Changelog
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    NSTI to Frequency

    - Source: R/utils.R + Source: R/utils.R
    diff --git a/reference/roundDec.html b/reference/roundDec.html index a202e98..83bec4a 100644 --- a/reference/roundDec.html +++ b/reference/roundDec.html @@ -61,7 +61,7 @@ Changelog
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    Round up to nearest decimal

    - Source: R/utils.R + Source: R/utils.R
    diff --git a/reference/scores2Freq.html b/reference/scores2Freq.html index 48c0fb6..32f2a9f 100644 --- a/reference/scores2Freq.html +++ b/reference/scores2Freq.html @@ -61,7 +61,7 @@ Changelog