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Python.yml
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name: Python
on:
push:
paths-ignore:
- '**.md'
pull_request:
paths-ignore:
- '**.md'
- 'examples/**'
- 'test/**'
- 'tools/juliapkg/**'
- 'tools/nodejs/**'
- 'tools/rpkg/**'
- '.github/workflows/**'
- '!.github/workflows/Python.yml'
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}-${{ github.head_ref || '' }}-${{ github.base_ref || '' }}-${{ github.ref != 'refs/heads/master' || github.sha }}
cancel-in-progress: true
env:
GH_TOKEN: ${{ secrets.GH_TOKEN }}
TWINE_PASSWORD: ${{ secrets.TWINE_PASSWORD }}
AWS_ACCESS_KEY_ID: AKIAVBLKPL2ZW2T7TYFQ
AWS_SECRET_ACCESS_KEY: ${{ secrets.NODE_PRE_GYP_SECRETACCESSKEY }}
NODE_AUTH_TOKEN: ${{secrets.NODE_AUTH_TOKEN}}
jobs:
# This is just a sanity check of Python 3.9 running with Arrow
linux-python3-9:
name: Python 3.9 Linux
runs-on: ubuntu-20.04
env:
CIBW_BUILD: 'cp39-manylinux_x86_64'
CIBW_TEST_COMMAND: 'python -m pytest {project}/tests'
SETUPTOOLS_SCM_NO_LOCAL: 'yes'
TWINE_USERNAME: 'hfmuehleisen'
PYTEST_TIMEOUT: '600'
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: '3.7'
- name: Install
shell: bash
run: pip install cibuildwheel twine
- name: Setup Ccache
uses: hendrikmuhs/ccache-action@main
with:
key: ${{ github.job }}
- name: Build
shell: bash
run: |
cd tools/pythonpkg
python setup.py sdist
mkdir duckdb_tarball && tar xvf dist/duckdb-*.tar.gz --strip-components=1 -C duckdb_tarball
export DISTUTILS_C_COMPILER_LAUNCHER=ccache
# TODO: Use ccache inside container, see https://github.com/pypa/cibuildwheel/issues/1030
cibuildwheel --output-dir wheelhouse --config-file cibw.toml duckdb_tarball
manylinux-extensions:
name: DuckDB Extensions (gcc4)
runs-on: ubuntu-latest
container: quay.io/pypa/manylinux2014_x86_64
needs: linux-python3-9
steps:
- name: Install dependencies
shell: bash
run: |
yum install -y gcc gcc-c++ cmake make
yum install -y epel-release
yum install -y make gcc perl-core pcre-devel wget zlib-devel python3
yum install -y https://packages.endpointdev.com/rhel/7/os/x86_64/endpoint-repo.x86_64.rpm
yum install -y git
yum install -y curl-devel expat-devel gettext-devel zlib-devel perl-ExtUtils-MakeMaker
- name: Install AWS CLI
shell: bash
run: |
python3 -m pip install awscli
aws --version
# the weird openssl findreplace fix with version numbers is from: https://github.com/h2o/h2o/issues/213
- name: Download OpenSSL 1.1.1k
shell: bash
run: |
wget https://ftp.openssl.org/source/openssl-1.1.1k.tar.gz --no-check-certificate
tar -xzvf openssl-1.1.1k.tar.gz
cd openssl-1.1.1k
find ./ -type f -exec sed -i -e 's/\#\ define\ OPENSSL\_VERSION\_NUMBER/\#define\ OPENSSL\_VERSION\_NUMBER/g' {} \;
- name: Configure OpenSSL
shell: bash
run: |
cd openssl-1.1.1k
./config --prefix=/usr --openssldir=/etc/ssl --libdir=lib no-shared zlib-dynamic
- name: Build OpenSSL
shell: bash
run: |
cd openssl-1.1.1k
make
make install
- uses: actions/checkout@v3
with:
fetch-depth: 0
- name: Version Check
shell: bash
run: |
cmake --version
ldd --version ldd
ls -al
pwd
echo "$USER"
- uses: ./.github/actions/build_extensions
with:
deploy_as: linux_amd64_gcc4
s3_id: ${{ secrets.S3_ID }}
s3_key: ${{ secrets.S3_KEY }}
signing_pk: ${{ secrets.DUCKDB_EXTENSION_SIGNING_PK }}
static_link_build: 1
treat_warn_as_error: 0
- uses: actions/upload-artifact@v2
with:
name: manylinux-extensions-x86_64
path: |
build/release/extension/*/*.duckdb_extension
linux-python3:
name: Python 3 Linux
runs-on: ubuntu-20.04
strategy:
matrix:
arch: [i686, x86_64]
python_build: [cp37-*, cp38-*, cp39-*,cp310-*]
isRelease:
- ${{ startsWith(github.ref, 'refs/tags/v') || github.ref == 'refs/heads/master' }}
exclude:
- isRelease: false
python_build: 'cp38-*'
- isRelease: false
python_build: 'cp39-*'
needs: manylinux-extensions
env:
CIBW_BUILD: ${{ matrix.python_build}}
CIBW_ARCHS: ${{ matrix.arch == 'i686' && 'auto32' || 'auto64'}}
SETUPTOOLS_SCM_NO_LOCAL: 'yes'
TWINE_USERNAME: 'hfmuehleisen'
PYTEST_TIMEOUT: '600'
DUCKDB_BUILD_UNITY: 1
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: '3.7'
- name: Install
shell: bash
run: pip install cibuildwheel twine
- uses: actions/download-artifact@v3
if: ${{ matrix.arch == 'x86_64' }}
with:
name: manylinux-extensions-x86_64
path: tools/pythonpkg
- name: List extensions to be tested
shell: bash
run: |
find tools/pythonpkg -maxdepth 2 -type f -name "*.duckdb_extension"
- name: Setup Ccache
uses: hendrikmuhs/ccache-action@main
with:
key: ${{ github.job }}-${{ matrix.arch }}-${{ matrix.python_build }}
- name: Build
shell: bash
run: |
cd tools/pythonpkg
python setup.py sdist
mkdir duckdb_tarball && tar xvf dist/duckdb-*.tar.gz --strip-components=1 -C duckdb_tarball
ls duckdb_tarball
export DISTUTILS_C_COMPILER_LAUNCHER=ccache
# TODO: Use ccache inside container, see https://github.com/pypa/cibuildwheel/issues/1030
cibuildwheel --output-dir wheelhouse --config-file cibw.toml duckdb_tarball
ls wheelhouse
- name: Deploy
shell: bash
run: |
python scripts/asset-upload-gha.py duckdb_python_src.tar.gz=tools/pythonpkg/dist/duckdb-*.tar.gz
if [[ "$GITHUB_REF" =~ ^(refs/heads/master|refs/tags/v.+)$ && "$GITHUB_REPOSITORY" = "duckdb/duckdb" ]] ; then
twine upload --non-interactive --disable-progress-bar --skip-existing tools/pythonpkg/wheelhouse/*.whl tools/pythonpkg/dist/duckdb-*.tar.gz
fi
osx-python3:
if: startsWith(github.ref, 'refs/tags/v') || github.ref == 'refs/heads/master'
name: Python 3 OSX
runs-on: macos-latest
strategy:
matrix:
python_build: [cp36-*, cp37-*, cp38-*, cp39-*, cp310-*]
needs: linux-python3-9
env:
CIBW_BUILD: ${{ matrix.python_build}}
CIBW_ARCHS: 'x86_64 universal2 arm64'
CIBW_TEST_COMMAND: 'python -m pytest {project}/tests/fast'
SETUPTOOLS_SCM_NO_LOCAL: 'yes'
TWINE_USERNAME: 'hfmuehleisen'
DUCKDB_BUILD_UNITY: 1
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: '3.7'
- name: Install
shell: bash
run: pip install cibuildwheel twine
- name: Setup Ccache
uses: hendrikmuhs/ccache-action@main
with:
key: ${{ github.job }}-${{ matrix.python_build }}
- name: Build
shell: bash
run: |
cd tools/pythonpkg
python setup.py sdist
mkdir duckdb_tarball && tar xvf dist/duckdb-*.tar.gz --strip-components=1 -C duckdb_tarball
export DISTUTILS_C_COMPILER_LAUNCHER=ccache
# TODO: Use ccache inside container, see https://github.com/pypa/cibuildwheel/issues/1030
cibuildwheel --output-dir wheelhouse --config-file cibw.toml duckdb_tarball
- name: Deploy
shell: bash
run: |
if [[ "$GITHUB_REF" =~ ^(refs/heads/master|refs/tags/v.+)$ && "$GITHUB_REPOSITORY" = "duckdb/duckdb" ]] ; then
twine upload --non-interactive --disable-progress-bar --skip-existing tools/pythonpkg/wheelhouse/*.whl
fi
win-python3:
name: Python 3 Windows
runs-on: windows-latest
strategy:
matrix:
python_build: [cp36-*, cp37-*, cp38-*, cp39-*, cp310-*]
isRelease:
- ${{ startsWith(github.ref, 'refs/tags/v') || github.ref == 'refs/heads/master' }}
exclude:
- isRelease: false
python_build: 'cp37-*'
- isRelease: false
python_build: 'cp38-*'
- isRelease: false
python_build: 'cp39-*'
needs: linux-python3-9
env:
CIBW_BUILD: ${{ matrix.python_build}}
SETUPTOOLS_SCM_NO_LOCAL: 'yes'
SETUPTOOLS_USE_DISTUTILS: 'stdlib'
TWINE_USERNAME: 'hfmuehleisen'
DUCKDB_BUILD_UNITY: 1
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: '3.7'
- name: Install
shell: bash
run: pip install cibuildwheel twine
- name: Setup Ccache
uses: hendrikmuhs/ccache-action@main
with:
key: ${{ github.job }}-${{ matrix.python_build }}
- name: Build
shell: bash
run: |
cd tools/pythonpkg
python setup.py sdist
mkdir duckdb_tarball && tar xvf dist/duckdb-*.tar.gz --strip-components=1 -C duckdb_tarball
export DISTUTILS_C_COMPILER_LAUNCHER=ccache
# TODO: Use ccache inside container, see https://github.com/pypa/cibuildwheel/issues/1030
cibuildwheel --output-dir wheelhouse --config-file cibw.toml duckdb_tarball
- name: Deploy
shell: bash
run: |
if [[ "$GITHUB_REF" =~ ^(refs/heads/master|refs/tags/v.+)$ && "$GITHUB_REPOSITORY" = "duckdb/duckdb" ]] ; then
twine upload --non-interactive --disable-progress-bar --skip-existing tools/pythonpkg/wheelhouse/*.whl
fi
linux-tarball:
name: Python 3 Tarball
runs-on: ubuntu-20.04
needs: linux-python3-9
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: '3.7'
- name: Install
shell: bash
run: pip install numpy pytest pandas mypy psutil
- name: Setup Ccache
uses: hendrikmuhs/ccache-action@main
with:
key: ${{ github.job }}
- name: Build
shell: bash
run: |
python --version
git archive --format zip --output test-tarball.zip HEAD
mkdir duckdb-test-tarball
mv test-tarball.zip duckdb-test-tarball
cd duckdb-test-tarball
unzip test-tarball.zip
cd tools/pythonpkg
export SETUPTOOLS_SCM_PRETEND_VERSION=0.2.2
export DISTUTILS_C_COMPILER_LAUNCHER=ccache
pip install . --user
(cd tests/ && python -m pytest)
python-address-sanitizer:
name: Python Address Sanitizer (Linux)
runs-on: ubuntu-latest
container: ubuntu:16.04
needs: linux-python3-9
env:
GEN: ninja
DUCKDEBUG: 1
ASAN_OPTIONS: detect_leaks=0
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- uses: ./.github/actions/ubuntu_16_setup
with:
openssl: 0
python: 0
- name: Install OpenSSL
shell: bash
run: |
apt-get install -y -qq libbz2-dev
wget https://www.openssl.org/source/openssl-1.0.2o.tar.gz
tar -xf openssl-1.0.2o.tar.gz
cd openssl-1.0.2o
./config shared --prefix=/usr/local/
make
make install
mkdir lib
cp ./*.{so,so.1.0.0,a,pc} ./lib
- name: Install Python 3 With Sanitizers
shell: bash
run: |
wget https://github.com/python/cpython/archive/refs/tags/v3.9.12.zip
unzip v3.9.12.zip
rm v3.9.12.zip
cd cpython-3.9.12
mkdir debug-build
export LD_LIBRARY_PATH=${GITHUB_WORKSPACE}/openssl-1.0.2o/lib
./configure --with-ensurepip=install --with-address-sanitizer --with-undefined-behavior-sanitizer --with-openssl=${GITHUB_WORKSPACE}/openssl-1.0.2o --prefix=${GITHUB_WORKSPACE}/debug-build
make -j
make install
- name: Install Python Test Dependencies
shell: bash
run: |
${GITHUB_WORKSPACE}/debug-build/bin/python3 -m pip install numpy pandas pyarrow pytest psutil
- name: Install DuckDB Python
shell: bash
run: |
cd tools/pythonpkg
${GITHUB_WORKSPACE}/debug-build/bin/python3 -m pip install .
- name: Run Python Tests
shell: bash
run: |
cd tools/pythonpkg
${GITHUB_WORKSPACE}/debug-build/bin/python3 -m pytest tests/fast
linux-release-cleanup:
if: startsWith(github.ref, 'refs/tags/v') || github.ref == 'refs/heads/master'
name: PyPi Release Cleanup
runs-on: ubuntu-20.04
needs: linux-python3-9
env:
PYPI_PASSWORD: ${{secrets.PYPI_PASSWORD}}
steps:
- uses: actions/checkout@v3
with:
fetch-depth: 0
- uses: actions/setup-python@v2
with:
python-version: '3.7'
- name: Cleanup Releases
shell: bash
run: python3 scripts/pypi_cleanup.py