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DESCRIPTION
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DESCRIPTION
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Package: BiocParallel
Type: Package
Title: Bioconductor facilities for parallel evaluation
Version: 1.35.3
Authors@R: c(
person("Martin", "Morgan",
email = "[email protected]",
role=c("aut", "cre")),
person("Jiefei", "Wang", role = "aut"),
person("Valerie", "Obenchain", role="aut"),
person("Michel", "Lang", email="[email protected]", role="aut"),
person("Ryan", "Thompson", email="[email protected]", role="aut"),
person("Nitesh", "Turaga", role="aut"),
person("Aaron", "Lun", role = "ctb"),
person("Henrik", "Bengtsson", role = "ctb"),
person("Madelyn", "Carlson", role = "ctb",
comment = "Translated 'Random Numbers' vignette from Sweave to RMarkdown / HTML."
),
person("Phylis", "Atieno", role = "ctb",
comment = "Translated 'Introduction to BiocParallel' vignette from Sweave to Rmarkdown / HTML."
),
person(
"Sergio", "Oller", role = "ctb",
comment = c(
"Improved bpmapply() efficiency.",
"ORCID" = "0000-0002-8994-1549"
)
))
Description: This package provides modified versions and novel
implementation of functions for parallel evaluation, tailored to
use with Bioconductor objects.
URL: https://github.com/Bioconductor/BiocParallel
BugReports: https://github.com/Bioconductor/BiocParallel/issues
biocViews: Infrastructure
License: GPL-2 | GPL-3
SystemRequirements: C++11
Depends: methods, R (>= 3.5.0)
Imports: stats, utils, futile.logger, parallel, snow, codetools
Suggests: BiocGenerics, tools, foreach, BBmisc, doParallel,
GenomicRanges, RNAseqData.HNRNPC.bam.chr14,
TxDb.Hsapiens.UCSC.hg19.knownGene, VariantAnnotation, Rsamtools,
GenomicAlignments, ShortRead, RUnit, BiocStyle, knitr, batchtools,
data.table
Enhances: Rmpi
Collate: AllGenerics.R DeveloperInterface.R prototype.R
bploop.R ErrorHandling.R log.R
bpbackend-methods.R bpisup-methods.R bplapply-methods.R
bpiterate-methods.R bpstart-methods.R bpstop-methods.R
BiocParallelParam-class.R
bpmapply-methods.R bpschedule-methods.R bpvec-methods.R
bpvectorize-methods.R bpworkers-methods.R bpaggregate-methods.R
bpvalidate.R SnowParam-class.R MulticoreParam-class.R
TransientMulticoreParam-class.R register.R
SerialParam-class.R DoparParam-class.R SnowParam-utils.R
BatchtoolsParam-class.R
progress.R ipcmutex.R worker-number.R
utilities.R rng.R bpinit.R reducer.R worker.R
bpoptions.R cpp11.R BiocParallel-defunct.R
LinkingTo: BH, cpp11
VignetteBuilder: knitr
RoxygenNote: 7.1.2