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Please add centrifuge to the eu server #356

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macelik opened this issue Nov 21, 2020 · 0 comments
Open

Please add centrifuge to the eu server #356

macelik opened this issue Nov 21, 2020 · 0 comments

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@macelik
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macelik commented Nov 21, 2020

I'm just posting this in the hopes that IUC would consider updating the wrapper for Centrifuge tool for metagenomic sequence classification on the usegalaxy.eu server. This tool is mainly used and considered one of the state of the art. Metagenomics classification tools are challenging to install itself, even with a Docker image, and would be nice to include in public Galaxy server. Later, I am plannig to create a workflow for metagenomics analysis which would include these widely used tools.

Here is the current centrifuge on toolshed which is not available on the tools search section:

https://toolshed.g2.bx.psu.edu/view/jvolkening/centrifuge/be7bba8229c6

Thank you so much

@macelik macelik changed the title Issue with Centrifuge Please add centrifuge to the eu server Nov 24, 2020
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