recalibrate-BAM-paired-input-with-recal-table.yaml

---
patient_id: "patient_id"
input:
  BAM:
    normal:
      - "/absolute/path/to/BAM"
    tumor:
      - "/absolute/path/to/BAM"
  recalibration_table:
    - "/absolute/path/to/recalibration/table/sample1"
    - "/absolute/path/to/recalibration/table/sample2"