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F72.config
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process {
withName: run_validate_PipeVal {
cpus = 1
memory = 1.GB
}
withName: call_gSV_Delly {
cpus = 1
memory = 30.GB
retry_strategy {
memory {
strategy = 'exponential'
operand = 2
}
}
}
withName: call_gCNV_Delly {
cpus = 1
memory = 30.GB
retry_strategy {
memory {
strategy = 'exponential'
operand = 2
}
}
}
withName: call_gSV_Manta {
cpus = 24
memory = 30.GB
retry_strategy {
memory {
strategy = 'exponential'
operand = 2
}
}
}
withName: convert_gSV_BCF2VCF_BCFtools {
cpus = 1
memory = 10.GB
retry_strategy {
memory {
strategy = 'exponential'
operand = 2
}
}
}
withName: convert_gCNV_BCF2VCF_BCFtools {
cpus = 1
memory = 10.GB
retry_strategy {
memory {
strategy = 'exponential'
operand = 2
}
}
}
withName: run_gSV_vcfstats_RTGTools {
cpus = 1
memory = 10.GB
retry_strategy {
memory {
strategy = 'exponential'
operand = 2
}
}
}
withName: run_gCNV_vcfstats_RTGTools {
cpus = 1
memory = 10.GB
retry_strategy {
memory {
strategy = 'exponential'
operand = 2
}
}
}
withName: run_gSV_vcf_validator_VCFtools {
cpus = 1
memory = 10.GB
retry_strategy {
memory {
strategy = 'exponential'
operand = 2
}
}
}
withName: run_gCNV_vcf_validator_VCFtools {
cpus = 1
memory = 10.GB
retry_strategy {
memory {
strategy = 'exponential'
operand = 2
}
}
}
}