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Contamination file extension #117

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yashpatel6 opened this issue Dec 20, 2022 · 0 comments

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yashpatel6 commented Dec 20, 2022

    @yashpatel6 Minor point but it looks like this is just a TSV file and if so, we probably want to consider using `.tsv` instead to limit the number of extensions to use although I know [the developer's documentation](https://gatk.broadinstitute.org/hc/en-us/articles/360036888972-CalculateContamination) uses `.table`

Originally posted by @tyamaguchi-ucla in uclahs-cds/pipeline-call-sSNV#129 (comment)

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