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Investigate Qualimap #5

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maotian06 opened this issue Aug 25, 2022 · 0 comments
Open

Investigate Qualimap #5

maotian06 opened this issue Aug 25, 2022 · 0 comments

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@maotian06
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Hi @alkaZeltser
I was running my samples using the pipeline and qualimap at the same time.
Qualimap is much faster than samtools depth. Have you tried Qualimap? It has conda version, so we should be able to build docker on it.
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@maotian06