From 6d470baa82b9b8688ee44c00f79958d0a10a8aca Mon Sep 17 00:00:00 2001
From: nwiltsie <nwiltsie@users.noreply.github.com>
Date: Fri, 12 Apr 2024 20:20:58 +0000
Subject: [PATCH] Deployed f906163 to development with MkDocs 1.5.3 and mike
 2.0.0

---
 development/contributors/index.html             |   2 +-
 development/discussions/index.html              |   2 +-
 development/flow-diagram/index.html             |   2 +-
 development/how-to-run/index.html               |   2 +-
 development/index.html                          |   4 ++--
 development/inputs-and-configuration/index.html |   2 +-
 development/license/index.html                  |   2 +-
 development/outputs/index.html                  |   2 +-
 development/overview/index.html                 |   2 +-
 development/pipeline-steps/index.html           |   2 +-
 development/references/index.html               |   8 ++++----
 development/sitemap.xml.gz                      | Bin 127 -> 127 bytes
 development/testing-and-validation/index.html   |   8 ++++----
 versions.json                                   |   4 ++--
 14 files changed, 21 insertions(+), 21 deletions(-)

diff --git a/development/contributors/index.html b/development/contributors/index.html
index 9c113e8..c976068 100644
--- a/development/contributors/index.html
+++ b/development/contributors/index.html
@@ -102,7 +102,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">Contributors</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
diff --git a/development/discussions/index.html b/development/discussions/index.html
index 811403d..e7a3ba0 100644
--- a/development/discussions/index.html
+++ b/development/discussions/index.html
@@ -102,7 +102,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">Discussions</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
diff --git a/development/flow-diagram/index.html b/development/flow-diagram/index.html
index 80e163d..a26c586 100644
--- a/development/flow-diagram/index.html
+++ b/development/flow-diagram/index.html
@@ -102,7 +102,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">Flow Diagram</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
diff --git a/development/how-to-run/index.html b/development/how-to-run/index.html
index fc6b2be..729601c 100644
--- a/development/how-to-run/index.html
+++ b/development/how-to-run/index.html
@@ -102,7 +102,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">How To Run</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
diff --git a/development/index.html b/development/index.html
index b1b55a7..14887c8 100644
--- a/development/index.html
+++ b/development/index.html
@@ -102,7 +102,7 @@
     <li><a href="." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">Home</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
@@ -191,5 +191,5 @@ <h1 id="calculate-targeted-coverage">Calculate Targeted Coverage</h1>
 
 <!--
 MkDocs version : 1.5.3
-Build Date UTC : 2024-04-01 20:01:06.000430+00:00
+Build Date UTC : 2024-04-12 20:20:58.375719+00:00
 -->
diff --git a/development/inputs-and-configuration/index.html b/development/inputs-and-configuration/index.html
index c58f8d9..323c1f7 100644
--- a/development/inputs-and-configuration/index.html
+++ b/development/inputs-and-configuration/index.html
@@ -102,7 +102,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">Inputs and Configuration</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
diff --git a/development/license/index.html b/development/license/index.html
index 318515b..53dd533 100644
--- a/development/license/index.html
+++ b/development/license/index.html
@@ -102,7 +102,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">License</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
diff --git a/development/outputs/index.html b/development/outputs/index.html
index 7a05b3b..83f4074 100644
--- a/development/outputs/index.html
+++ b/development/outputs/index.html
@@ -102,7 +102,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">Outputs</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
diff --git a/development/overview/index.html b/development/overview/index.html
index f403677..b307a44 100644
--- a/development/overview/index.html
+++ b/development/overview/index.html
@@ -102,7 +102,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">Overview</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
diff --git a/development/pipeline-steps/index.html b/development/pipeline-steps/index.html
index 1cedfdf..3786ff1 100644
--- a/development/pipeline-steps/index.html
+++ b/development/pipeline-steps/index.html
@@ -116,7 +116,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">Pipeline Steps</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
diff --git a/development/references/index.html b/development/references/index.html
index 9332d36..d00974c 100644
--- a/development/references/index.html
+++ b/development/references/index.html
@@ -102,7 +102,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">References</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
@@ -112,9 +112,9 @@
               
                 <h2 id="references">References</h2>
 <ol>
-<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/links-to-papers/external-code/documentation/metadata/other-repos/or-anything-else">Reference 1</a></li>
-<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/links-to-papers/external-code/documentation/metadata/other-repos/or-anything-else">Reference 2</a></li>
-<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/links-to-papers/external-code/documentation/metadata/other-repos/or-anything-else">Reference n</a></li>
+<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/links-to-papers/external-code/documentation/metadata/other-repos/or-anything-else">Reference 1</a></li>
+<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/links-to-papers/external-code/documentation/metadata/other-repos/or-anything-else">Reference 2</a></li>
+<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/links-to-papers/external-code/documentation/metadata/other-repos/or-anything-else">Reference n</a></li>
 </ol>
 <hr />
               
diff --git a/development/sitemap.xml.gz b/development/sitemap.xml.gz
index 3e6d385e33998a02fb4c27f9eeb9ace50a658af9..38dc31a27e190f2ba961a05f2ffb063194e1f582 100644
GIT binary patch
delta 13
Ucmb=gXP58h;8-<Xaw2;L036-~DgXcg

delta 13
Ucmb=gXP58h;Aj%!p2%JS02v(vZvX%Q

diff --git a/development/testing-and-validation/index.html b/development/testing-and-validation/index.html
index 3375b58..2d4ce8d 100644
--- a/development/testing-and-validation/index.html
+++ b/development/testing-and-validation/index.html
@@ -108,7 +108,7 @@
     <li><a href=".." class="icon icon-home" aria-label="Docs"></a></li>
       <li class="breadcrumb-item active">Testing and Validation</li>
     <li class="wy-breadcrumbs-aside">
-          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/README.md" class="icon icon-github"> Edit on GitHub</a>
+          <a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/README.md" class="icon icon-github"> Edit on GitHub</a>
     </li>
   </ul>
   <hr/>
@@ -157,9 +157,9 @@ <h3 id="validation">Validation \<version number></h3>
 </tbody>
 </table>
 <ul>
-<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/link">Reference/External Link/Path 1 to any files/plots or other validation results</a></li>
-<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/link">Reference/External Link/Path 2 to any files/plots or other validation results</a></li>
-<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/015011a0968378d5a2ed3ff4d0fbbe9124bad8c1/link">Reference/External Link/Path n to any files/plots or other validation results</a></li>
+<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/link">Reference/External Link/Path 1 to any files/plots or other validation results</a></li>
+<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/link">Reference/External Link/Path 2 to any files/plots or other validation results</a></li>
+<li><a href="https://github.com/uclahs-cds/pipeline-calculate-targeted-coverage/blob/f90616316bfb29e71bbaba0287b2ead41a89f630/link">Reference/External Link/Path n to any files/plots or other validation results</a></li>
 </ul>
 <h3 id="validation-tool">Validation Tool</h3>
 <p>Included is a template for validating your input files. For more information on the tool check out: https://github.com/uclahs-cds/tool-validate-nf</p>
diff --git a/versions.json b/versions.json
index 60e3f81..28d7fcf 100644
--- a/versions.json
+++ b/versions.json
@@ -4,8 +4,8 @@
     "title": "development",
     "aliases": [],
     "properties": {
-      "commit": "015011a0968378d5a2ed3ff4d0fbbe9124bad8c1",
-      "date": "2024-04-01T12:59:50-07:00"
+      "commit": "f90616316bfb29e71bbaba0287b2ead41a89f630",
+      "date": "2024-04-12T13:20:15-07:00"
     }
   },
   {