diff --git a/docs/pipeline.mmd.svg b/docs/pipeline.mmd.svg index 8983e1b..ad77bca 100644 --- a/docs/pipeline.mmd.svg +++ b/docs/pipeline.mmd.svg @@ -1 +1 @@ -         Predict StabilitySNVSVLiftoverAnnotationbcftools annotateStabilitypredict-liftover-stability.Rrf_modelNote: Annotation isperformed beforeLiftover when liftingbackwardextract-VCF-features.Rfuncotator_sourcesrepeat_bedbcftools annotateTrinucleotidebcftools annotateRepeatMaskergatk Funcotatorchain_filebcftools +liftoverheader_contigschain_filegnomad_rdsextract-VCF-features-SV.Rliftover-Delly2-vcf.RLegendNodesInput FileParameterized InputOutput fileProcessesGATKbcftoolsRscriptGeneric LinuxInput VCFpipevalVariant Type?Output VCFs \ No newline at end of file +         Predict StabilitySNVSVLiftoverAnnotationbcftools annotateStabilitypredict-variant-stability.Rrf_modelNote: Annotation isperformed prior toLiftOver whenconverting from GRCh38-> GRCh37extract-VCF-features.Rfuncotator_sourcesrepeat_bedbcftools annotateTrinucleotidebcftools annotateRepeatMaskergatk Funcotatorchain_filebcftools +liftoverheader_contigschain_filegnomad_rdsextract-VCF-features-SV.Rliftover-Delly2-vcf.RLegendNodesInput FileParameterized InputOutput fileProcessesGATKbcftoolsRscriptGeneric LinuxInput VCFpipevalVariant Type?Output VCFs \ No newline at end of file