From 77fe0864ec64898c699ba756e77834b1cc51659d Mon Sep 17 00:00:00 2001
From: Yash Patel <86321070+yashpatel6@users.noreply.github.com>
Date: Tue, 12 Nov 2024 15:29:36 -0800
Subject: [PATCH] Add pipelines to dependabot (#234)

---
 .github/dependabot.yml | 9 +++++++++
 1 file changed, 9 insertions(+)

diff --git a/.github/dependabot.yml b/.github/dependabot.yml
index 0dd106f..30eeaa7 100644
--- a/.github/dependabot.yml
+++ b/.github/dependabot.yml
@@ -12,6 +12,15 @@ updates:
         patterns:
           - "*/pipeline-Nextflow-config"
           - "*/pipeline-Nextflow-module"
+  - package-ecosystem: "gitsubmodule"
+    directory: "/"
+    schedule:
+      interval: "daily"
+    allow:
+      - dependency-name: "external/pipeline-*"
+    ignore:
+      - dependency-name: "external/pipeline-Nextflow-config"
+      - dependency-name: "external/pipeline-Nextflow-module"
   - package-ecosystem: github-actions
     directory: /
     schedule: