diff --git a/.secrets.baseline b/.secrets.baseline
index b91536e6..acdae8db 100644
--- a/.secrets.baseline
+++ b/.secrets.baseline
@@ -7,6 +7,9 @@
     {
       "name": "AWSKeyDetector"
     },
+    {
+      "name": "AzureStorageKeyDetector"
+    },
     {
       "name": "Base64HighEntropyString",
       "limit": 4.5
@@ -17,9 +20,15 @@
     {
       "name": "CloudantDetector"
     },
+    {
+      "name": "DiscordBotTokenDetector"
+    },
+    {
+      "name": "GitHubTokenDetector"
+    },
     {
       "name": "HexHighEntropyString",
-      "limit": 3
+      "limit": 3.0
     },
     {
       "name": "IbmCloudIamDetector"
@@ -37,15 +46,24 @@
     {
       "name": "MailchimpDetector"
     },
+    {
+      "name": "NpmDetector"
+    },
     {
       "name": "PrivateKeyDetector"
     },
+    {
+      "name": "SendGridDetector"
+    },
     {
       "name": "SlackDetector"
     },
     {
       "name": "SoftlayerDetector"
     },
+    {
+      "name": "SquareOAuthDetector"
+    },
     {
       "name": "StripeDetector"
     },
@@ -57,10 +75,6 @@
     {
       "path": "detect_secrets.filters.allowlist.is_line_allowlisted"
     },
-    {
-      "path": "detect_secrets.filters.common.is_baseline_file",
-      "filename": ".secrets.baseline"
-    },
     {
       "path": "detect_secrets.filters.common.is_ignored_due_to_verification_policies",
       "min_level": 2
@@ -257,7 +271,7 @@
         "filename": "tests/integration/datadict/submission/test_endpoints.py",
         "hashed_secret": "78b4db9b2aec0f0f2d3e38f9278be42b861c9dc3",
         "is_verified": false,
-        "line_number": 1410
+        "line_number": 1420
       }
     ],
     "tests/integration/datadictwithobjid/submission/data/biospec1.json": [
@@ -336,5 +350,5 @@
       }
     ]
   },
-  "generated_at": "2023-10-20T23:12:07Z"
+  "generated_at": "2023-10-27T19:51:06Z"
 }
diff --git a/poetry.lock b/poetry.lock
index 793cb12f..097893a4 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,10 +1,9 @@
-# This file is automatically @generated by Poetry 1.4.1 and should not be changed by hand.
+# This file is automatically @generated by Poetry 1.6.1 and should not be changed by hand.
 
 [[package]]
 name = "alabaster"
 version = "0.7.13"
 description = "A configurable sidebar-enabled Sphinx theme"
-category = "dev"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -12,11 +11,29 @@ files = [
     {file = "alabaster-0.7.13.tar.gz", hash = "sha256:a27a4a084d5e690e16e01e03ad2b2e552c61a65469419b907243193de1a84ae2"},
 ]
 
+[[package]]
+name = "alembic"
+version = "1.12.1"
+description = "A database migration tool for SQLAlchemy."
+optional = false
+python-versions = ">=3.7"
+files = [
+    {file = "alembic-1.12.1-py3-none-any.whl", hash = "sha256:47d52e3dfb03666ed945becb723d6482e52190917fdb47071440cfdba05d92cb"},
+    {file = "alembic-1.12.1.tar.gz", hash = "sha256:bca5877e9678b454706347bc10b97cb7d67f300320fa5c3a94423e8266e2823f"},
+]
+
+[package.dependencies]
+Mako = "*"
+SQLAlchemy = ">=1.3.0"
+typing-extensions = ">=4"
+
+[package.extras]
+tz = ["python-dateutil"]
+
 [[package]]
 name = "aniso8601"
 version = "9.0.1"
 description = "A library for parsing ISO 8601 strings."
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -31,7 +48,6 @@ dev = ["black", "coverage", "isort", "pre-commit", "pyenchant", "pylint"]
 name = "anyio"
 version = "4.0.0"
 description = "High level compatibility layer for multiple asynchronous event loop implementations"
-category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -53,7 +69,6 @@ trio = ["trio (>=0.22)"]
 name = "attrs"
 version = "23.1.0"
 description = "Classes Without Boilerplate"
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -70,34 +85,31 @@ tests-no-zope = ["cloudpickle", "hypothesis", "mypy (>=1.1.1)", "pympler", "pyte
 
 [[package]]
 name = "authlib"
-version = "0.11"
-description = "The ultimate Python library in building OAuth and OpenID Connect servers."
-category = "main"
+version = "1.2.1"
+description = "The ultimate Python library in building OAuth and OpenID Connect servers and clients."
 optional = false
 python-versions = "*"
 files = [
-    {file = "Authlib-0.11-py2.py3-none-any.whl", hash = "sha256:3a226f231e962a16dd5f6fcf0c113235805ba206e294717a64fa8e04ae3ad9c4"},
-    {file = "Authlib-0.11.tar.gz", hash = "sha256:9741db6de2950a0a5cefbdb72ec7ab12f7e9fd530ff47219f1530e79183cbaaf"},
+    {file = "Authlib-1.2.1-py2.py3-none-any.whl", hash = "sha256:c88984ea00149a90e3537c964327da930779afa4564e354edfd98410bea01911"},
+    {file = "Authlib-1.2.1.tar.gz", hash = "sha256:421f7c6b468d907ca2d9afede256f068f87e34d23dd221c07d13d4c234726afb"},
 ]
 
 [package.dependencies]
-cryptography = "*"
-requests = "*"
+cryptography = ">=3.2"
 
 [[package]]
 name = "authutils"
-version = "6.2.2"
+version = "6.2.3"
 description = "Gen3 auth utility functions"
-category = "main"
 optional = false
 python-versions = ">=3.9,<4.0"
 files = [
-    {file = "authutils-6.2.2-py3-none-any.whl", hash = "sha256:df9b551b4ab561452f0f4b50edaddccc443905b4d77ee69ea7eea78938e7caed"},
-    {file = "authutils-6.2.2.tar.gz", hash = "sha256:ded3e5c0e35160eab83bfb217976920396441e19ed977acacbb769e988323850"},
+    {file = "authutils-6.2.3-py3-none-any.whl", hash = "sha256:8c4e7e24183cbc1055ab91eaf9d2966f0da5b739be0fabfe380749674ba3057e"},
+    {file = "authutils-6.2.3.tar.gz", hash = "sha256:c44e1f309b2b5b6db1276f69e1e18ec5c6be1ae33bfe52608a30049b8669ff7b"},
 ]
 
 [package.dependencies]
-authlib = "0.11.0"
+authlib = ">=1.1.0"
 cached-property = ">=1.4,<2.0"
 cdiserrors = "<2.0.0"
 httpx = ">=0.23.0,<1.0.0"
@@ -106,17 +118,16 @@ xmltodict = ">=0.9,<1.0"
 
 [package.extras]
 fastapi = ["fastapi (>=0.65.2,<0.66.0)"]
-flask = ["Flask (>=0.10.1)"]
+flask = ["Flask (<=2.3.3)"]
 
 [[package]]
 name = "avro"
-version = "1.11.2"
+version = "1.11.3"
 description = "Avro is a serialization and RPC framework."
-category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
-    {file = "avro-1.11.2.tar.gz", hash = "sha256:53dcd5bffccb9a72136f08d0b18771795eaf4eefb028bbaaed5f4e1787f0e268"},
+    {file = "avro-1.11.3.tar.gz", hash = "sha256:3393bb5139f9cf0791d205756ce1e39a5b58586af5b153d6a3b5a199610e9d17"},
 ]
 
 [package.extras]
@@ -125,21 +136,22 @@ zstandard = ["zstandard"]
 
 [[package]]
 name = "babel"
-version = "2.12.1"
+version = "2.13.1"
 description = "Internationalization utilities"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "Babel-2.12.1-py3-none-any.whl", hash = "sha256:b4246fb7677d3b98f501a39d43396d3cafdc8eadb045f4a31be01863f655c610"},
-    {file = "Babel-2.12.1.tar.gz", hash = "sha256:cc2d99999cd01d44420ae725a21c9e3711b3aadc7976d6147f622d8581963455"},
+    {file = "Babel-2.13.1-py3-none-any.whl", hash = "sha256:7077a4984b02b6727ac10f1f7294484f737443d7e2e66c5e4380e41a3ae0b4ed"},
+    {file = "Babel-2.13.1.tar.gz", hash = "sha256:33e0952d7dd6374af8dbf6768cc4ddf3ccfefc244f9986d4074704f2fbd18900"},
 ]
 
+[package.extras]
+dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"]
+
 [[package]]
 name = "backoff"
 version = "1.11.1"
 description = "Function decoration for backoff and retry"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -147,11 +159,21 @@ files = [
     {file = "backoff-1.11.1.tar.gz", hash = "sha256:ccb962a2378418c667b3c979b504fdeb7d9e0d29c0579e3b13b86467177728cb"},
 ]
 
+[[package]]
+name = "blinker"
+version = "1.7.0"
+description = "Fast, simple object-to-object and broadcast signaling"
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "blinker-1.7.0-py3-none-any.whl", hash = "sha256:c3f865d4d54db7abc53758a01601cf343fe55b84c1de4e3fa910e420b438d5b9"},
+    {file = "blinker-1.7.0.tar.gz", hash = "sha256:e6820ff6fa4e4d1d8e2747c2283749c3f547e4fee112b98555cdcdae32996182"},
+]
+
 [[package]]
 name = "boto"
 version = "2.49.0"
 description = "Amazon Web Services Library"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -161,49 +183,46 @@ files = [
 
 [[package]]
 name = "boto3"
-version = "1.28.41"
+version = "1.28.85"
 description = "The AWS SDK for Python"
-category = "dev"
 optional = false
 python-versions = ">= 3.7"
 files = [
-    {file = "boto3-1.28.41-py3-none-any.whl", hash = "sha256:47215c08645d1ea2568f9f358f25ffd4a42e08bce9af2fa1dd70c93c682dc880"},
-    {file = "boto3-1.28.41.tar.gz", hash = "sha256:2f655ab7e577c7543f9ee4e42d98641ccf02230d2f33695a6b39617b765401f5"},
+    {file = "boto3-1.28.85-py3-none-any.whl", hash = "sha256:1fb7e7ba32a6701990168eb7a08e1fb624ae48130784dfab25904ed47deabb31"},
+    {file = "boto3-1.28.85.tar.gz", hash = "sha256:96b4cb2708933cef7dbe1177df37ef0593839942978784147aade0e49511eb2b"},
 ]
 
 [package.dependencies]
-botocore = ">=1.31.41,<1.32.0"
+botocore = ">=1.31.85,<1.32.0"
 jmespath = ">=0.7.1,<2.0.0"
-s3transfer = ">=0.6.0,<0.7.0"
+s3transfer = ">=0.7.0,<0.8.0"
 
 [package.extras]
 crt = ["botocore[crt] (>=1.21.0,<2.0a0)"]
 
 [[package]]
 name = "botocore"
-version = "1.31.41"
+version = "1.31.85"
 description = "Low-level, data-driven core of boto 3."
-category = "main"
 optional = false
 python-versions = ">= 3.7"
 files = [
-    {file = "botocore-1.31.41-py3-none-any.whl", hash = "sha256:c33a453328d361c089e6a8f9dd671a7b939288e539e6550c7030152e8162e906"},
-    {file = "botocore-1.31.41.tar.gz", hash = "sha256:4dad7c5a5e70940de54ebf8de3955450c1f092f43cacff8103819d1e7d5374fa"},
+    {file = "botocore-1.31.85-py3-none-any.whl", hash = "sha256:b8f35d65f2b45af50c36fc25cc1844d6bd61d38d2148b2ef133b8f10e198555d"},
+    {file = "botocore-1.31.85.tar.gz", hash = "sha256:ce58e688222df73ec5691f934be1a2122a52c9d11d3037b586b3fff16ed6d25f"},
 ]
 
 [package.dependencies]
 jmespath = ">=0.7.1,<2.0.0"
 python-dateutil = ">=2.1,<3.0.0"
-urllib3 = ">=1.25.4,<1.27"
+urllib3 = {version = ">=1.25.4,<1.27", markers = "python_version < \"3.10\""}
 
 [package.extras]
-crt = ["awscrt (==0.16.26)"]
+crt = ["awscrt (==0.19.12)"]
 
 [[package]]
 name = "cached-property"
 version = "1.5.2"
 description = "A decorator for caching properties in classes."
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -215,7 +234,6 @@ files = [
 name = "cdiserrors"
 version = "1.0.0"
 description = "Gen3 shared exceptions and utilities."
-category = "main"
 optional = false
 python-versions = ">=3.6,<4.0"
 files = [
@@ -233,7 +251,6 @@ flask = ["Flask (>=1.1.2,<2.0.0)"]
 name = "cdislogging"
 version = "1.1.1"
 description = "Standardized logging tool and format for cdis applications"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -244,7 +261,6 @@ files = [
 name = "cdispyutils"
 version = "2.0.1"
 description = "This package includes several utility Python tools for the Gen3 stack."
-category = "main"
 optional = false
 python-versions = ">=3.6,<4.0"
 files = [
@@ -263,7 +279,6 @@ requests = "*"
 name = "cdisutils"
 version = "1.2.2"
 description = "Miscellaneous utilities useful for interaction with CDIS systems."
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -283,7 +298,6 @@ xmltodict = ">=0.9.2"
 name = "certifi"
 version = "2023.7.22"
 description = "Python package for providing Mozilla's CA Bundle."
-category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -293,76 +307,63 @@ files = [
 
 [[package]]
 name = "cffi"
-version = "1.15.1"
+version = "1.16.0"
 description = "Foreign Function Interface for Python calling C code."
-category = "main"
 optional = false
-python-versions = "*"
+python-versions = ">=3.8"
 files = [
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 [package.dependencies]
@@ -370,94 +371,107 @@ pycparser = "*"
 
 [[package]]
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 description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
-category = "main"
 optional = false
 python-versions = ">=3.7.0"
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 name = "click"
 version = "8.1.7"
 description = "Composable command line interface toolkit"
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -472,7 +486,6 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""}
 name = "codacy-coverage"
 version = "1.3.11"
 description = "Codacy coverage reporter for Python"
-category = "dev"
 optional = false
 python-versions = "*"
 files = [
@@ -491,7 +504,6 @@ test = ["coverage", "nosetests"]
 name = "colorama"
 version = "0.4.6"
 description = "Cross-platform colored terminal text."
-category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7"
 files = [
@@ -501,64 +513,63 @@ files = [
 
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 [package.dependencies]
@@ -569,35 +580,34 @@ toml = ["tomli"]
 
 [[package]]
 name = "cryptography"
-version = "41.0.3"
+version = "41.0.5"
 description = "cryptography is a package which provides cryptographic recipes and primitives to Python developers."
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
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+    {file = "cryptography-41.0.5-pp39-pypy39_pp73-win_amd64.whl", hash = "sha256:0d2a6a598847c46e3e321a7aef8af1436f11c27f1254933746304ff014664d84"},
+    {file = "cryptography-41.0.5.tar.gz", hash = "sha256:392cb88b597247177172e02da6b7a63deeff1937fa6fec3bbf902ebd75d97ec7"},
 ]
 
 [package.dependencies]
@@ -617,7 +627,6 @@ test-randomorder = ["pytest-randomly"]
 name = "datamodelutils"
 version = "1.0.0"
 description = ""
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -633,26 +642,25 @@ psqlgraph = ">=3.0.0"
 
 [[package]]
 name = "dictionaryutils"
-version = "3.4.6"
+version = "3.4.9"
 description = "Python wrapper and metaschema for datadictionary."
-category = "main"
 optional = false
-python-versions = ">=3.6,<3.10"
+python-versions = ">=3.9,<4"
 files = [
-    {file = "dictionaryutils-3.4.6.tar.gz", hash = "sha256:b834bbb802d930fefae99ad155a0b07eef1a07f87c0b3aaef220dc20dda73a9c"},
+    {file = "dictionaryutils-3.4.9.tar.gz", hash = "sha256:18bf677a123ec8fd1e6ce5f2887bc7555dd1faca245a31e3cb6b858bfade87c1"},
 ]
 
 [package.dependencies]
 cdislogging = ">=1.0.0,<2.0.0"
 jsonschema = ">=2.5,<4"
-PyYAML = ">=5.1,<6.0"
+nose = "*"
+PyYAML = "*"
 requests = ">=2.18,<3.0"
 
 [[package]]
 name = "docutils"
 version = "0.18.1"
 description = "Docutils -- Python Documentation Utilities"
-category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -664,7 +672,6 @@ files = [
 name = "doiclient"
 version = "0.1"
 description = ""
-category = "dev"
 optional = false
 python-versions = "*"
 files = []
@@ -683,7 +690,6 @@ resolved_reference = "1a5f4b2a0b04577f31f3dcec511ade117d9f4ba1"
 name = "dosclient"
 version = "0.1"
 description = ""
-category = "dev"
 optional = false
 python-versions = "*"
 files = []
@@ -702,7 +708,6 @@ resolved_reference = "38c0f1ab42edf3efb1ad6348d7dbdff81b131360"
 name = "envelopes"
 version = "0.4"
 description = "Mailing for human beings"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -713,7 +718,6 @@ files = [
 name = "et-xmlfile"
 version = "1.1.0"
 description = "An implementation of lxml.xmlfile for the standard library"
-category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -725,7 +729,6 @@ files = [
 name = "exceptiongroup"
 version = "1.1.3"
 description = "Backport of PEP 654 (exception groups)"
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -740,7 +743,6 @@ test = ["pytest (>=6)"]
 name = "flasgger"
 version = "0.9.7.1"
 description = "Extract swagger specs from your flask project"
-category = "dev"
 optional = false
 python-versions = "*"
 files = [
@@ -757,22 +759,22 @@ six = ">=1.10.0"
 
 [[package]]
 name = "flask"
-version = "2.1.3"
+version = "2.3.3"
 description = "A simple framework for building complex web applications."
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "Flask-2.1.3-py3-none-any.whl", hash = "sha256:9013281a7402ad527f8fd56375164f3aa021ecfaff89bfe3825346c24f87e04c"},
-    {file = "Flask-2.1.3.tar.gz", hash = "sha256:15972e5017df0575c3d6c090ba168b6db90259e620ac8d7ea813a396bad5b6cb"},
+    {file = "flask-2.3.3-py3-none-any.whl", hash = "sha256:f69fcd559dc907ed196ab9df0e48471709175e696d6e698dd4dbe940f96ce66b"},
+    {file = "flask-2.3.3.tar.gz", hash = "sha256:09c347a92aa7ff4a8e7f3206795f30d826654baf38b873d0744cd571ca609efc"},
 ]
 
 [package.dependencies]
-click = ">=8.0"
+blinker = ">=1.6.2"
+click = ">=8.1.3"
 importlib-metadata = {version = ">=3.6.0", markers = "python_version < \"3.10\""}
-itsdangerous = ">=2.0"
-Jinja2 = ">=3.0"
-Werkzeug = ">=2.0"
+itsdangerous = ">=2.1.2"
+Jinja2 = ">=3.1.2"
+Werkzeug = ">=2.3.7"
 
 [package.extras]
 async = ["asgiref (>=3.2)"]
@@ -782,7 +784,6 @@ dotenv = ["python-dotenv"]
 name = "flask-sqlalchemy-session"
 version = "1.1"
 description = "SQL Alchemy session scoped on Flask requests."
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -801,7 +802,6 @@ docs = ["Sphinx (>=1.2.3)", "alabaster (>=0.6.3)"]
 name = "fuzzywuzzy"
 version = "0.18.0"
 description = "Fuzzy string matching in python"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -816,7 +816,6 @@ speedup = ["python-levenshtein (>=0.12)"]
 name = "gen3authz"
 version = "1.5.1"
 description = "Gen3 authz client"
-category = "main"
 optional = false
 python-versions = ">=3.6,<4.0"
 files = [
@@ -834,7 +833,6 @@ six = ">=1.16.0,<2.0.0"
 name = "gen3datamodel"
 version = "3.1.2"
 description = ""
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -854,7 +852,6 @@ strict-rfc3339 = "0.7"
 name = "gen3dictionary"
 version = "2.0.1"
 description = "Gen3 generic data dictionary"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -870,7 +867,6 @@ PyYAML = ">=5.1,<6.0"
 name = "graphene"
 version = "3.3"
 description = "GraphQL Framework for Python"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -891,7 +887,6 @@ test = ["coveralls (>=3.3,<4)", "iso8601 (>=1,<2)", "mock (>=4,<5)", "pytest (>=
 name = "graphql-core"
 version = "3.2.3"
 description = "GraphQL implementation for Python, a port of GraphQL.js, the JavaScript reference implementation for GraphQL."
-category = "main"
 optional = false
 python-versions = ">=3.6,<4"
 files = [
@@ -903,7 +898,6 @@ files = [
 name = "graphql-relay"
 version = "3.2.0"
 description = "Relay library for graphql-core"
-category = "main"
 optional = false
 python-versions = ">=3.6,<4"
 files = [
@@ -918,7 +912,6 @@ graphql-core = ">=3.2,<3.3"
 name = "graphviz"
 version = "0.20.1"
 description = "Simple Python interface for Graphviz"
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -935,7 +928,6 @@ test = ["coverage", "mock (>=4)", "pytest (>=7)", "pytest-cov", "pytest-mock (>=
 name = "h11"
 version = "0.14.0"
 description = "A pure-Python, bring-your-own-I/O implementation of HTTP/1.1"
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -947,7 +939,6 @@ files = [
 name = "hsclient"
 version = "0.1"
 description = ""
-category = "dev"
 optional = false
 python-versions = "*"
 files = []
@@ -964,55 +955,53 @@ resolved_reference = "f122072ee245216da5e4260f718d6f886db81773"
 
 [[package]]
 name = "httpcore"
-version = "0.17.3"
+version = "1.0.2"
 description = "A minimal low-level HTTP client."
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "httpcore-0.17.3-py3-none-any.whl", hash = "sha256:c2789b767ddddfa2a5782e3199b2b7f6894540b17b16ec26b2c4d8e103510b87"},
-    {file = "httpcore-0.17.3.tar.gz", hash = "sha256:a6f30213335e34c1ade7be6ec7c47f19f50c56db36abef1a9dfa3815b1cb3888"},
+    {file = "httpcore-1.0.2-py3-none-any.whl", hash = "sha256:096cc05bca73b8e459a1fc3dcf585148f63e534eae4339559c9b8a8d6399acc7"},
+    {file = "httpcore-1.0.2.tar.gz", hash = "sha256:9fc092e4799b26174648e54b74ed5f683132a464e95643b226e00c2ed2fa6535"},
 ]
 
 [package.dependencies]
-anyio = ">=3.0,<5.0"
 certifi = "*"
 h11 = ">=0.13,<0.15"
-sniffio = ">=1.0.0,<2.0.0"
 
 [package.extras]
+asyncio = ["anyio (>=4.0,<5.0)"]
 http2 = ["h2 (>=3,<5)"]
-socks = ["socksio (>=1.0.0,<2.0.0)"]
+socks = ["socksio (==1.*)"]
+trio = ["trio (>=0.22.0,<0.23.0)"]
 
 [[package]]
 name = "httpx"
-version = "0.24.1"
+version = "0.25.1"
 description = "The next generation HTTP client."
-category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
-    {file = "httpx-0.24.1-py3-none-any.whl", hash = "sha256:06781eb9ac53cde990577af654bd990a4949de37a28bdb4a230d434f3a30b9bd"},
-    {file = "httpx-0.24.1.tar.gz", hash = "sha256:5853a43053df830c20f8110c5e69fe44d035d850b2dfe795e196f00fdb774bdd"},
+    {file = "httpx-0.25.1-py3-none-any.whl", hash = "sha256:fec7d6cc5c27c578a391f7e87b9aa7d3d8fbcd034f6399f9f79b45bcc12a866a"},
+    {file = "httpx-0.25.1.tar.gz", hash = "sha256:ffd96d5cf901e63863d9f1b4b6807861dbea4d301613415d9e6e57ead15fc5d0"},
 ]
 
 [package.dependencies]
+anyio = "*"
 certifi = "*"
-httpcore = ">=0.15.0,<0.18.0"
+httpcore = "*"
 idna = "*"
 sniffio = "*"
 
 [package.extras]
 brotli = ["brotli", "brotlicffi"]
-cli = ["click (>=8.0.0,<9.0.0)", "pygments (>=2.0.0,<3.0.0)", "rich (>=10,<14)"]
+cli = ["click (==8.*)", "pygments (==2.*)", "rich (>=10,<14)"]
 http2 = ["h2 (>=3,<5)"]
-socks = ["socksio (>=1.0.0,<2.0.0)"]
+socks = ["socksio (==1.*)"]
 
 [[package]]
 name = "idna"
 version = "3.4"
 description = "Internationalized Domain Names in Applications (IDNA)"
-category = "main"
 optional = false
 python-versions = ">=3.5"
 files = [
@@ -1024,7 +1013,6 @@ files = [
 name = "imagesize"
 version = "1.4.1"
 description = "Getting image size from png/jpeg/jpeg2000/gif file"
-category = "dev"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -1036,7 +1024,6 @@ files = [
 name = "importlib-metadata"
 version = "6.8.0"
 description = "Read metadata from Python packages"
-category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1056,7 +1043,6 @@ testing = ["flufl.flake8", "importlib-resources (>=1.3)", "packaging", "pyfakefs
 name = "indexclient"
 version = "2.2.1"
 description = ""
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1068,41 +1054,40 @@ requests = ">=2.5.2,<3.0.0"
 
 [[package]]
 name = "indexd"
-version = "3.5.0"
+version = "5.0.3"
 description = "Gen3 Indexing Service"
-category = "dev"
 optional = false
-python-versions = "^3.9"
+python-versions = ">=3.9,<4.0"
 files = []
 develop = false
 
 [package.dependencies]
+alembic = "^1.9.4"
 authutils = "^6.0.0"
 cdiserrors = "^1.0.0"
 cdislogging = "^1.0.0"
 doiclient = {git = "https://github.com/uc-cdis/doiclient", rev = "1.0.0"}
 dosclient = {git = "https://github.com/uc-cdis/dosclient", rev = "1.1.0"}
-flask = "^2.0.1"
+flask = "^2.2.5"
 gen3authz = "^1.0.4"
 hsclient = {git = "https://github.com/uc-cdis/hsclient", rev = "1.0.0"}
 indexclient = "^2.1.0"
 jsonschema = "^3.2"
 psycopg2 = "^2.7"
-PyYAML = "^5.4"
+PyYAML = ">=5.3,<7"
 sqlalchemy = "~1.3.3"
 sqlalchemy-utils = "^0.37.3"
 
 [package.source]
 type = "git"
 url = "https://github.com/uc-cdis/indexd"
-reference = "4.0.2"
-resolved_reference = "a4d9555e3c04a4e597e796a545ef69c567d7e49c"
+reference = "5.0.3"
+resolved_reference = "575d497a275e1d285bebc2eec62476ef99db5cd5"
 
 [[package]]
 name = "iniconfig"
 version = "2.0.0"
 description = "brain-dead simple config-ini parsing"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1114,7 +1099,6 @@ files = [
 name = "itsdangerous"
 version = "2.1.2"
 description = "Safely pass data to untrusted environments and back."
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1126,7 +1110,6 @@ files = [
 name = "jinja2"
 version = "3.1.2"
 description = "A very fast and expressive template engine."
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1144,7 +1127,6 @@ i18n = ["Babel (>=2.7)"]
 name = "jmespath"
 version = "1.0.1"
 description = "JSON Matching Expressions"
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1156,7 +1138,6 @@ files = [
 name = "jsonschema"
 version = "3.2.0"
 description = "An implementation of JSON Schema validation for Python"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1178,7 +1159,6 @@ format-nongpl = ["idna", "jsonpointer (>1.13)", "rfc3339-validator", "rfc3986-va
 name = "lxml"
 version = "4.9.3"
 description = "Powerful and Pythonic XML processing library combining libxml2/libxslt with the ElementTree API."
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, != 3.4.*"
 files = [
@@ -1282,11 +1262,29 @@ html5 = ["html5lib"]
 htmlsoup = ["BeautifulSoup4"]
 source = ["Cython (>=0.29.35)"]
 
+[[package]]
+name = "mako"
+version = "1.3.0"
+description = "A super-fast templating language that borrows the best ideas from the existing templating languages."
+optional = false
+python-versions = ">=3.8"
+files = [
+    {file = "Mako-1.3.0-py3-none-any.whl", hash = "sha256:57d4e997349f1a92035aa25c17ace371a4213f2ca42f99bee9a602500cfd54d9"},
+    {file = "Mako-1.3.0.tar.gz", hash = "sha256:e3a9d388fd00e87043edbe8792f45880ac0114e9c4adc69f6e9bfb2c55e3b11b"},
+]
+
+[package.dependencies]
+MarkupSafe = ">=0.9.2"
+
+[package.extras]
+babel = ["Babel"]
+lingua = ["lingua"]
+testing = ["pytest"]
+
 [[package]]
 name = "markupsafe"
 version = "2.1.3"
 description = "Safely add untrusted strings to HTML/XML markup."
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1344,21 +1342,19 @@ files = [
 
 [[package]]
 name = "mistune"
-version = "3.0.1"
+version = "3.0.2"
 description = "A sane and fast Markdown parser with useful plugins and renderers"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "mistune-3.0.1-py3-none-any.whl", hash = "sha256:b9b3e438efbb57c62b5beb5e134dab664800bdf1284a7ee09e8b12b13eb1aac6"},
-    {file = "mistune-3.0.1.tar.gz", hash = "sha256:e912116c13aa0944f9dc530db38eb88f6a77087ab128f49f84a48f4c05ea163c"},
+    {file = "mistune-3.0.2-py3-none-any.whl", hash = "sha256:71481854c30fdbc938963d3605b72501f5c10a9320ecd412c121c163a1c7d205"},
+    {file = "mistune-3.0.2.tar.gz", hash = "sha256:fc7f93ded930c92394ef2cb6f04a8aabab4117a91449e72dcc8dfa646a508be8"},
 ]
 
 [[package]]
 name = "mock"
 version = "5.1.0"
 description = "Rolling backport of unittest.mock for all Pythons"
-category = "dev"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1373,14 +1369,13 @@ test = ["pytest", "pytest-cov"]
 
 [[package]]
 name = "moto"
-version = "4.2.2"
+version = "4.2.8"
 description = ""
-category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "moto-4.2.2-py2.py3-none-any.whl", hash = "sha256:2a9cbcd9da1a66b23f95d62ef91968284445233a606b4de949379395056276fb"},
-    {file = "moto-4.2.2.tar.gz", hash = "sha256:ee34c4c3f53900d953180946920c9dba127a483e2ed40e6dbf93d4ae2e760e7c"},
+    {file = "moto-4.2.8-py2.py3-none-any.whl", hash = "sha256:e78b49ae8acee06a865e4963174bdf974dd66398fb3bb831a7428498506c0c56"},
+    {file = "moto-4.2.8.tar.gz", hash = "sha256:9b5a363f36f8c3fb36388764e7b8c01c615da2f2cba7da3e681680de14bfc769"},
 ]
 
 [package.dependencies]
@@ -1395,28 +1390,29 @@ werkzeug = ">=0.5,<2.2.0 || >2.2.0,<2.2.1 || >2.2.1"
 xmltodict = "*"
 
 [package.extras]
-all = ["PyYAML (>=5.1)", "aws-xray-sdk (>=0.93,!=0.96)", "cfn-lint (>=0.40.0)", "docker (>=3.0.0)", "ecdsa (!=0.15)", "graphql-core", "jsondiff (>=1.1.2)", "openapi-spec-validator (>=0.2.8)", "py-partiql-parser (==0.3.6)", "pyparsing (>=3.0.7)", "python-jose[cryptography] (>=3.1.0,<4.0.0)", "setuptools", "sshpubkeys (>=3.1.0)"]
-apigateway = ["PyYAML (>=5.1)", "ecdsa (!=0.15)", "openapi-spec-validator (>=0.2.8)", "python-jose[cryptography] (>=3.1.0,<4.0.0)"]
+all = ["PyYAML (>=5.1)", "aws-xray-sdk (>=0.93,!=0.96)", "cfn-lint (>=0.40.0)", "docker (>=3.0.0)", "ecdsa (!=0.15)", "graphql-core", "jsondiff (>=1.1.2)", "multipart", "openapi-spec-validator (>=0.5.0)", "py-partiql-parser (==0.4.2)", "pyparsing (>=3.0.7)", "python-jose[cryptography] (>=3.1.0,<4.0.0)", "setuptools", "sshpubkeys (>=3.1.0)"]
+apigateway = ["PyYAML (>=5.1)", "ecdsa (!=0.15)", "openapi-spec-validator (>=0.5.0)", "python-jose[cryptography] (>=3.1.0,<4.0.0)"]
 apigatewayv2 = ["PyYAML (>=5.1)"]
 appsync = ["graphql-core"]
 awslambda = ["docker (>=3.0.0)"]
 batch = ["docker (>=3.0.0)"]
-cloudformation = ["PyYAML (>=5.1)", "aws-xray-sdk (>=0.93,!=0.96)", "cfn-lint (>=0.40.0)", "docker (>=3.0.0)", "ecdsa (!=0.15)", "graphql-core", "jsondiff (>=1.1.2)", "openapi-spec-validator (>=0.2.8)", "py-partiql-parser (==0.3.6)", "pyparsing (>=3.0.7)", "python-jose[cryptography] (>=3.1.0,<4.0.0)", "setuptools", "sshpubkeys (>=3.1.0)"]
+cloudformation = ["PyYAML (>=5.1)", "aws-xray-sdk (>=0.93,!=0.96)", "cfn-lint (>=0.40.0)", "docker (>=3.0.0)", "ecdsa (!=0.15)", "graphql-core", "jsondiff (>=1.1.2)", "openapi-spec-validator (>=0.5.0)", "py-partiql-parser (==0.4.2)", "pyparsing (>=3.0.7)", "python-jose[cryptography] (>=3.1.0,<4.0.0)", "setuptools", "sshpubkeys (>=3.1.0)"]
 cognitoidp = ["ecdsa (!=0.15)", "python-jose[cryptography] (>=3.1.0,<4.0.0)"]
 ds = ["sshpubkeys (>=3.1.0)"]
-dynamodb = ["docker (>=3.0.0)", "py-partiql-parser (==0.3.6)"]
-dynamodbstreams = ["docker (>=3.0.0)", "py-partiql-parser (==0.3.6)"]
+dynamodb = ["docker (>=3.0.0)", "py-partiql-parser (==0.4.2)"]
+dynamodbstreams = ["docker (>=3.0.0)", "py-partiql-parser (==0.4.2)"]
 ebs = ["sshpubkeys (>=3.1.0)"]
 ec2 = ["sshpubkeys (>=3.1.0)"]
 efs = ["sshpubkeys (>=3.1.0)"]
 eks = ["sshpubkeys (>=3.1.0)"]
 glue = ["pyparsing (>=3.0.7)"]
 iotdata = ["jsondiff (>=1.1.2)"]
-resourcegroupstaggingapi = ["PyYAML (>=5.1)", "cfn-lint (>=0.40.0)", "docker (>=3.0.0)", "ecdsa (!=0.15)", "graphql-core", "jsondiff (>=1.1.2)", "openapi-spec-validator (>=0.2.8)", "py-partiql-parser (==0.3.6)", "pyparsing (>=3.0.7)", "python-jose[cryptography] (>=3.1.0,<4.0.0)", "sshpubkeys (>=3.1.0)"]
+proxy = ["PyYAML (>=5.1)", "aws-xray-sdk (>=0.93,!=0.96)", "cfn-lint (>=0.40.0)", "docker (>=2.5.1)", "ecdsa (!=0.15)", "graphql-core", "jsondiff (>=1.1.2)", "multipart", "openapi-spec-validator (>=0.5.0)", "py-partiql-parser (==0.4.2)", "pyparsing (>=3.0.7)", "python-jose[cryptography] (>=3.1.0,<4.0.0)", "setuptools", "sshpubkeys (>=3.1.0)"]
+resourcegroupstaggingapi = ["PyYAML (>=5.1)", "cfn-lint (>=0.40.0)", "docker (>=3.0.0)", "ecdsa (!=0.15)", "graphql-core", "jsondiff (>=1.1.2)", "openapi-spec-validator (>=0.5.0)", "py-partiql-parser (==0.4.2)", "pyparsing (>=3.0.7)", "python-jose[cryptography] (>=3.1.0,<4.0.0)", "sshpubkeys (>=3.1.0)"]
 route53resolver = ["sshpubkeys (>=3.1.0)"]
-s3 = ["PyYAML (>=5.1)", "py-partiql-parser (==0.3.6)"]
-s3crc32c = ["PyYAML (>=5.1)", "crc32c", "py-partiql-parser (==0.3.6)"]
-server = ["PyYAML (>=5.1)", "aws-xray-sdk (>=0.93,!=0.96)", "cfn-lint (>=0.40.0)", "docker (>=3.0.0)", "ecdsa (!=0.15)", "flask (!=2.2.0,!=2.2.1)", "flask-cors", "graphql-core", "jsondiff (>=1.1.2)", "openapi-spec-validator (>=0.2.8)", "py-partiql-parser (==0.3.6)", "pyparsing (>=3.0.7)", "python-jose[cryptography] (>=3.1.0,<4.0.0)", "setuptools", "sshpubkeys (>=3.1.0)"]
+s3 = ["PyYAML (>=5.1)", "py-partiql-parser (==0.4.2)"]
+s3crc32c = ["PyYAML (>=5.1)", "crc32c", "py-partiql-parser (==0.4.2)"]
+server = ["PyYAML (>=5.1)", "aws-xray-sdk (>=0.93,!=0.96)", "cfn-lint (>=0.40.0)", "docker (>=3.0.0)", "ecdsa (!=0.15)", "flask (!=2.2.0,!=2.2.1)", "flask-cors", "graphql-core", "jsondiff (>=1.1.2)", "openapi-spec-validator (>=0.5.0)", "py-partiql-parser (==0.4.2)", "pyparsing (>=3.0.7)", "python-jose[cryptography] (>=3.1.0,<4.0.0)", "setuptools", "sshpubkeys (>=3.1.0)"]
 ssm = ["PyYAML (>=5.1)"]
 xray = ["aws-xray-sdk (>=0.93,!=0.96)", "setuptools"]
 
@@ -1424,9 +1420,8 @@ xray = ["aws-xray-sdk (>=0.93,!=0.96)", "setuptools"]
 name = "ndg-httpsclient"
 version = "0.5.1"
 description = "Provides enhanced HTTPS support for httplib and urllib2 using PyOpenSSL"
-category = "main"
 optional = false
-python-versions = ">=2.7,<3.0.0 || >=3.4.0"
+python-versions = ">=2.7,<3.0.dev0 || >=3.4.dev0"
 files = [
     {file = "ndg_httpsclient-0.5.1-py2-none-any.whl", hash = "sha256:d2c7225f6a1c6cf698af4ebc962da70178a99bcde24ee6d1961c4f3338130d57"},
     {file = "ndg_httpsclient-0.5.1-py3-none-any.whl", hash = "sha256:dd174c11d971b6244a891f7be2b32ca9853d3797a72edb34fa5d7b07d8fff7d4"},
@@ -1437,11 +1432,22 @@ files = [
 pyasn1 = ">=0.1.1"
 PyOpenSSL = "*"
 
+[[package]]
+name = "nose"
+version = "1.3.7"
+description = "nose extends unittest to make testing easier"
+optional = false
+python-versions = "*"
+files = [
+    {file = "nose-1.3.7-py2-none-any.whl", hash = "sha256:dadcddc0aefbf99eea214e0f1232b94f2fa9bd98fa8353711dacb112bfcbbb2a"},
+    {file = "nose-1.3.7-py3-none-any.whl", hash = "sha256:9ff7c6cc443f8c51994b34a667bbcf45afd6d945be7477b52e97516fd17c53ac"},
+    {file = "nose-1.3.7.tar.gz", hash = "sha256:f1bffef9cbc82628f6e7d7b40d7e255aefaa1adb6a1b1d26c69a8b79e6208a98"},
+]
+
 [[package]]
 name = "openpyxl"
 version = "3.1.2"
 description = "A Python library to read/write Excel 2010 xlsx/xlsm files"
-category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1454,21 +1460,19 @@ et-xmlfile = "*"
 
 [[package]]
 name = "packaging"
-version = "23.1"
+version = "23.2"
 description = "Core utilities for Python packages"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
-    {file = "packaging-23.1-py3-none-any.whl", hash = "sha256:994793af429502c4ea2ebf6bf664629d07c1a9fe974af92966e4b8d2df7edc61"},
-    {file = "packaging-23.1.tar.gz", hash = "sha256:a392980d2b6cffa644431898be54b0045151319d1e7ec34f0cfed48767dd334f"},
+    {file = "packaging-23.2-py3-none-any.whl", hash = "sha256:8c491190033a9af7e1d931d0b5dacc2ef47509b34dd0de67ed209b5203fc88c7"},
+    {file = "packaging-23.2.tar.gz", hash = "sha256:048fb0e9405036518eaaf48a55953c750c11e1a1b68e0dd1a9d62ed0c092cfc5"},
 ]
 
 [[package]]
 name = "pluggy"
 version = "1.3.0"
 description = "plugin and hook calling mechanisms for python"
-category = "dev"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1484,7 +1488,6 @@ testing = ["pytest", "pytest-benchmark"]
 name = "progressbar"
 version = "2.5"
 description = "Text progress bar library for Python."
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1495,7 +1498,6 @@ files = [
 name = "psqlgraph"
 version = "3.0.1"
 description = ""
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1513,100 +1515,106 @@ xlocal = ">=0.5,<1.0"
 
 [[package]]
 name = "psycopg2"
-version = "2.9.7"
+version = "2.9.9"
 description = "psycopg2 - Python-PostgreSQL Database Adapter"
-category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 files = [
-    {file = "psycopg2-2.9.7-cp310-cp310-win32.whl", hash = "sha256:1a6a2d609bce44f78af4556bea0c62a5e7f05c23e5ea9c599e07678995609084"},
-    {file = "psycopg2-2.9.7-cp310-cp310-win_amd64.whl", hash = "sha256:b22ed9c66da2589a664e0f1ca2465c29b75aaab36fa209d4fb916025fb9119e5"},
-    {file = "psycopg2-2.9.7-cp311-cp311-win32.whl", hash = "sha256:44d93a0109dfdf22fe399b419bcd7fa589d86895d3931b01fb321d74dadc68f1"},
-    {file = "psycopg2-2.9.7-cp311-cp311-win_amd64.whl", hash = "sha256:91e81a8333a0037babfc9fe6d11e997a9d4dac0f38c43074886b0d9dead94fe9"},
-    {file = "psycopg2-2.9.7-cp37-cp37m-win32.whl", hash = "sha256:d1210fcf99aae6f728812d1d2240afc1dc44b9e6cba526a06fb8134f969957c2"},
-    {file = "psycopg2-2.9.7-cp37-cp37m-win_amd64.whl", hash = "sha256:e9b04cbef584310a1ac0f0d55bb623ca3244c87c51187645432e342de9ae81a8"},
-    {file = "psycopg2-2.9.7-cp38-cp38-win32.whl", hash = "sha256:d5c5297e2fbc8068d4255f1e606bfc9291f06f91ec31b2a0d4c536210ac5c0a2"},
-    {file = "psycopg2-2.9.7-cp38-cp38-win_amd64.whl", hash = "sha256:8275abf628c6dc7ec834ea63f6f3846bf33518907a2b9b693d41fd063767a866"},
-    {file = "psycopg2-2.9.7-cp39-cp39-win32.whl", hash = "sha256:c7949770cafbd2f12cecc97dea410c514368908a103acf519f2a346134caa4d5"},
-    {file = "psycopg2-2.9.7-cp39-cp39-win_amd64.whl", hash = "sha256:b6bd7d9d3a7a63faae6edf365f0ed0e9b0a1aaf1da3ca146e6b043fb3eb5d723"},
-    {file = "psycopg2-2.9.7.tar.gz", hash = "sha256:f00cc35bd7119f1fed17b85bd1007855194dde2cbd8de01ab8ebb17487440ad8"},
+    {file = "psycopg2-2.9.9-cp310-cp310-win32.whl", hash = "sha256:38a8dcc6856f569068b47de286b472b7c473ac7977243593a288ebce0dc89516"},
+    {file = "psycopg2-2.9.9-cp310-cp310-win_amd64.whl", hash = "sha256:426f9f29bde126913a20a96ff8ce7d73fd8a216cfb323b1f04da402d452853c3"},
+    {file = "psycopg2-2.9.9-cp311-cp311-win32.whl", hash = "sha256:ade01303ccf7ae12c356a5e10911c9e1c51136003a9a1d92f7aa9d010fb98372"},
+    {file = "psycopg2-2.9.9-cp311-cp311-win_amd64.whl", hash = "sha256:121081ea2e76729acfb0673ff33755e8703d45e926e416cb59bae3a86c6a4981"},
+    {file = "psycopg2-2.9.9-cp37-cp37m-win32.whl", hash = "sha256:5e0d98cade4f0e0304d7d6f25bbfbc5bd186e07b38eac65379309c4ca3193efa"},
+    {file = "psycopg2-2.9.9-cp37-cp37m-win_amd64.whl", hash = "sha256:7e2dacf8b009a1c1e843b5213a87f7c544b2b042476ed7755be813eaf4e8347a"},
+    {file = "psycopg2-2.9.9-cp38-cp38-win32.whl", hash = "sha256:ff432630e510709564c01dafdbe996cb552e0b9f3f065eb89bdce5bd31fabf4c"},
+    {file = "psycopg2-2.9.9-cp38-cp38-win_amd64.whl", hash = "sha256:bac58c024c9922c23550af2a581998624d6e02350f4ae9c5f0bc642c633a2d5e"},
+    {file = "psycopg2-2.9.9-cp39-cp39-win32.whl", hash = "sha256:c92811b2d4c9b6ea0285942b2e7cac98a59e166d59c588fe5cfe1eda58e72d59"},
+    {file = "psycopg2-2.9.9-cp39-cp39-win_amd64.whl", hash = "sha256:de80739447af31525feddeb8effd640782cf5998e1a4e9192ebdf829717e3913"},
+    {file = "psycopg2-2.9.9.tar.gz", hash = "sha256:d1454bde93fb1e224166811694d600e746430c006fbb031ea06ecc2ea41bf156"},
 ]
 
 [[package]]
 name = "psycopg2-binary"
-version = "2.9.7"
+version = "2.9.9"
 description = "psycopg2 - Python-PostgreSQL Database Adapter"
-category = "main"
 optional = false
-python-versions = ">=3.6"
+python-versions = ">=3.7"
 files = [
-    {file = "psycopg2-binary-2.9.7.tar.gz", hash = "sha256:1b918f64a51ffe19cd2e230b3240ba481330ce1d4b7875ae67305bd1d37b041c"},
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 [[package]]
 name = "pyasn1"
 version = "0.5.0"
 description = "Pure-Python implementation of ASN.1 types and DER/BER/CER codecs (X.208)"
-category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
 files = [
@@ -1618,7 +1626,6 @@ files = [
 name = "pycparser"
 version = "2.21"
 description = "C parser in Python"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -1630,7 +1637,6 @@ files = [
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 version = "2.16.1"
 description = "Pygments is a syntax highlighting package written in Python."
-category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1645,7 +1651,6 @@ plugins = ["importlib-metadata"]
 name = "pyjwt"
 version = "2.8.0"
 description = "JSON Web Token implementation in Python"
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1664,70 +1669,72 @@ tests = ["coverage[toml] (==5.0.4)", "pytest (>=6.0.0,<7.0.0)"]
 
 [[package]]
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+cryptography = ">=41.0.5,<42"
 
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 test = ["flaky", "pretend", "pytest (>=3.0.1)"]
 
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 ]
 
 [[package]]
 name = "pytest"
-version = "7.4.1"
+version = "7.4.3"
 description = "pytest: simple powerful testing with Python"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
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 ]
 
 [package.dependencies]
@@ -1745,7 +1752,6 @@ testing = ["argcomplete", "attrs (>=19.2.0)", "hypothesis (>=3.56)", "mock", "no
 name = "pytest-cov"
 version = "4.1.0"
 description = "Pytest plugin for measuring coverage."
-category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1762,20 +1768,19 @@ testing = ["fields", "hunter", "process-tests", "pytest-xdist", "six", "virtuale
 
 [[package]]
 name = "pytest-flask"
-version = "1.2.0"
+version = "1.3.0"
 description = "A set of py.test fixtures to test Flask applications."
-category = "dev"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.7"
 files = [
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 ]
 
 [package.dependencies]
 Flask = "*"
 pytest = ">=5.2"
-Werkzeug = ">=0.7"
+Werkzeug = "*"
 
 [package.extras]
 docs = ["Sphinx", "sphinx-rtd-theme"]
@@ -1784,7 +1789,6 @@ docs = ["Sphinx", "sphinx-rtd-theme"]
 name = "python-dateutil"
 version = "2.8.2"
 description = "Extensions to the standard Python datetime module"
-category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
 files = [
@@ -1799,7 +1803,6 @@ six = ">=1.5"
 name = "pytz"
 version = "2023.3.post1"
 description = "World timezone definitions, modern and historical"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1809,48 +1812,30 @@ files = [
 
 [[package]]
 name = "pyyaml"
-version = "5.4.1"
+version = "5.3.1"
 description = "YAML parser and emitter for Python"
-category = "main"
 optional = false
-python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
+python-versions = "*"
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+    {file = "PyYAML-5.3.1.tar.gz", hash = "sha256:b8eac752c5e14d3eca0e6dd9199cd627518cb5ec06add0de9d32baeee6fe645d"},
 ]
 
 [[package]]
 name = "requests"
 version = "2.31.0"
 description = "Python HTTP for Humans."
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1872,7 +1857,6 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
 name = "requests-mock"
 version = "1.11.0"
 description = "Mock out responses from the requests package"
-category = "dev"
 optional = false
 python-versions = "*"
 files = [
@@ -1890,35 +1874,32 @@ test = ["fixtures", "mock", "purl", "pytest", "requests-futures", "sphinx", "tes
 
 [[package]]
 name = "responses"
-version = "0.23.3"
+version = "0.24.0"
 description = "A utility library for mocking out the `requests` Python library."
-category = "dev"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.8"
 files = [
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 ]
 
 [package.dependencies]
 pyyaml = "*"
 requests = ">=2.30.0,<3.0"
-types-PyYAML = "*"
 urllib3 = ">=1.25.10,<3.0"
 
 [package.extras]
-tests = ["coverage (>=6.0.0)", "flake8", "mypy", "pytest (>=7.0.0)", "pytest-asyncio", "pytest-cov", "pytest-httpserver", "tomli", "tomli-w", "types-requests"]
+tests = ["coverage (>=6.0.0)", "flake8", "mypy", "pytest (>=7.0.0)", "pytest-asyncio", "pytest-cov", "pytest-httpserver", "tomli", "tomli-w", "types-PyYAML", "types-requests"]
 
 [[package]]
 name = "s3transfer"
-version = "0.6.2"
+version = "0.7.0"
 description = "An Amazon S3 Transfer Manager"
-category = "dev"
 optional = false
 python-versions = ">= 3.7"
 files = [
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 ]
 
 [package.dependencies]
@@ -1929,121 +1910,131 @@ crt = ["botocore[crt] (>=1.20.29,<2.0a.0)"]
 
 [[package]]
 name = "setuptools"
-version = "68.1.2"
+version = "68.2.2"
 description = "Easily download, build, install, upgrade, and uninstall Python packages"
-category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
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+    {file = "setuptools-68.2.2.tar.gz", hash = "sha256:4ac1475276d2f1c48684874089fefcd83bd7162ddaafb81fac866ba0db282a87"},
 ]
 
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+    {file = "simplejson-3.19.2-cp39-cp39-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:16ca9c90da4b1f50f089e14485db8c20cbfff2d55424062791a7392b5a9b3ff9"},
+    {file = "simplejson-3.19.2-cp39-cp39-musllinux_1_1_aarch64.whl", hash = "sha256:1018bd0d70ce85f165185d2227c71e3b1e446186f9fa9f971b69eee223e1e3cd"},
+    {file = "simplejson-3.19.2-cp39-cp39-musllinux_1_1_i686.whl", hash = "sha256:e8dd53a8706b15bc0e34f00e6150fbefb35d2fd9235d095b4f83b3c5ed4fa11d"},
+    {file = "simplejson-3.19.2-cp39-cp39-musllinux_1_1_ppc64le.whl", hash = "sha256:2d022b14d7758bfb98405672953fe5c202ea8a9ccf9f6713c5bd0718eba286fd"},
+    {file = "simplejson-3.19.2-cp39-cp39-musllinux_1_1_x86_64.whl", hash = "sha256:febffa5b1eda6622d44b245b0685aff6fb555ce0ed734e2d7b1c3acd018a2cff"},
+    {file = "simplejson-3.19.2-cp39-cp39-win32.whl", hash = "sha256:4edcd0bf70087b244ba77038db23cd98a1ace2f91b4a3ecef22036314d77ac23"},
+    {file = "simplejson-3.19.2-cp39-cp39-win_amd64.whl", hash = "sha256:aad7405c033d32c751d98d3a65801e2797ae77fac284a539f6c3a3e13005edc4"},
+    {file = "simplejson-3.19.2-py3-none-any.whl", hash = "sha256:bcedf4cae0d47839fee7de344f96b5694ca53c786f28b5f773d4f0b265a159eb"},
+    {file = "simplejson-3.19.2.tar.gz", hash = "sha256:9eb442a2442ce417801c912df68e1f6ccfcd41577ae7274953ab3ad24ef7d82c"},
 ]
 
 [[package]]
 name = "six"
 version = "1.16.0"
 description = "Python 2 and 3 compatibility utilities"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
 files = [
@@ -2055,7 +2046,6 @@ files = [
 name = "sniffio"
 version = "1.3.0"
 description = "Sniff out which async library your code is running under"
-category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2067,7 +2057,6 @@ files = [
 name = "snowballstemmer"
 version = "2.2.0"
 description = "This package provides 29 stemmers for 28 languages generated from Snowball algorithms."
-category = "dev"
 optional = false
 python-versions = "*"
 files = [
@@ -2077,14 +2066,13 @@ files = [
 
 [[package]]
 name = "sphinx"
-version = "7.2.5"
+version = "7.2.6"
 description = "Python documentation generator"
-category = "dev"
 optional = false
 python-versions = ">=3.9"
 files = [
-    {file = "sphinx-7.2.5-py3-none-any.whl", hash = "sha256:9269f9ed2821c9ebd30e4204f5c2339f5d4980e377bc89cb2cb6f9b17409c20a"},
-    {file = "sphinx-7.2.5.tar.gz", hash = "sha256:1a9290001b75c497fd087e92b0334f1bbfa1a1ae7fddc084990c4b7bd1130b88"},
+    {file = "sphinx-7.2.6-py3-none-any.whl", hash = "sha256:1e09160a40b956dc623c910118fa636da93bd3ca0b9876a7b3df90f07d691560"},
+    {file = "sphinx-7.2.6.tar.gz", hash = "sha256:9a5160e1ea90688d5963ba09a2dcd8bdd526620edbb65c328728f1b2228d5ab5"},
 ]
 
 [package.dependencies]
@@ -2115,7 +2103,6 @@ test = ["cython (>=3.0)", "filelock", "html5lib", "pytest (>=4.6)", "setuptools
 name = "sphinx-rtd-theme"
 version = "1.3.0"
 description = "Read the Docs theme for Sphinx"
-category = "dev"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
 files = [
@@ -2135,7 +2122,6 @@ dev = ["bump2version", "sphinxcontrib-httpdomain", "transifex-client", "wheel"]
 name = "sphinxcontrib-applehelp"
 version = "1.0.7"
 description = "sphinxcontrib-applehelp is a Sphinx extension which outputs Apple help books"
-category = "dev"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -2154,7 +2140,6 @@ test = ["pytest"]
 name = "sphinxcontrib-devhelp"
 version = "1.0.5"
 description = "sphinxcontrib-devhelp is a sphinx extension which outputs Devhelp documents"
-category = "dev"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -2173,7 +2158,6 @@ test = ["pytest"]
 name = "sphinxcontrib-htmlhelp"
 version = "2.0.4"
 description = "sphinxcontrib-htmlhelp is a sphinx extension which renders HTML help files"
-category = "dev"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -2192,7 +2176,6 @@ test = ["html5lib", "pytest"]
 name = "sphinxcontrib-httpdomain"
 version = "1.8.1"
 description = "Sphinx domain for documenting HTTP APIs"
-category = "dev"
 optional = false
 python-versions = ">=2.7,!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*"
 files = [
@@ -2208,7 +2191,6 @@ Sphinx = ">=1.6"
 name = "sphinxcontrib-jquery"
 version = "4.1"
 description = "Extension to include jQuery on newer Sphinx releases"
-category = "dev"
 optional = false
 python-versions = ">=2.7"
 files = [
@@ -2223,7 +2205,6 @@ Sphinx = ">=1.8"
 name = "sphinxcontrib-jsmath"
 version = "1.0.1"
 description = "A sphinx extension which renders display math in HTML via JavaScript"
-category = "dev"
 optional = false
 python-versions = ">=3.5"
 files = [
@@ -2238,7 +2219,6 @@ test = ["flake8", "mypy", "pytest"]
 name = "sphinxcontrib-qthelp"
 version = "1.0.6"
 description = "sphinxcontrib-qthelp is a sphinx extension which outputs QtHelp documents"
-category = "dev"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -2257,7 +2237,6 @@ test = ["pytest"]
 name = "sphinxcontrib-serializinghtml"
 version = "1.1.9"
 description = "sphinxcontrib-serializinghtml is a sphinx extension which outputs \"serialized\" HTML files (json and pickle)"
-category = "dev"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -2276,7 +2255,6 @@ test = ["pytest"]
 name = "sqlalchemy"
 version = "1.3.24"
 description = "Database Abstraction Library"
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -2332,7 +2310,6 @@ pymysql = ["pymysql", "pymysql (<1)"]
 name = "sqlalchemy-utils"
 version = "0.37.9"
 description = "Various utility functions for SQLAlchemy."
-category = "dev"
 optional = false
 python-versions = "~=3.4"
 files = [
@@ -2362,7 +2339,6 @@ url = ["furl (>=0.4.1)"]
 name = "strict-rfc3339"
 version = "0.7"
 description = "Strict, simple, lightweight RFC3339 functions"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2373,7 +2349,6 @@ files = [
 name = "tomli"
 version = "2.0.1"
 description = "A lil' TOML parser"
-category = "dev"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2382,44 +2357,41 @@ files = [
 ]
 
 [[package]]
-name = "types-pyyaml"
-version = "6.0.12.11"
-description = "Typing stubs for PyYAML"
-category = "dev"
+name = "typing-extensions"
+version = "4.8.0"
+description = "Backported and Experimental Type Hints for Python 3.8+"
 optional = false
-python-versions = "*"
+python-versions = ">=3.8"
 files = [
-    {file = "types-PyYAML-6.0.12.11.tar.gz", hash = "sha256:7d340b19ca28cddfdba438ee638cd4084bde213e501a3978738543e27094775b"},
-    {file = "types_PyYAML-6.0.12.11-py3-none-any.whl", hash = "sha256:a461508f3096d1d5810ec5ab95d7eeecb651f3a15b71959999988942063bf01d"},
+    {file = "typing_extensions-4.8.0-py3-none-any.whl", hash = "sha256:8f92fc8806f9a6b641eaa5318da32b44d401efaac0f6678c9bc448ba3605faa0"},
+    {file = "typing_extensions-4.8.0.tar.gz", hash = "sha256:df8e4339e9cb77357558cbdbceca33c303714cf861d1eef15e1070055ae8b7ef"},
 ]
 
 [[package]]
 name = "urllib3"
-version = "1.26.16"
+version = "1.26.18"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
-category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*"
 files = [
-    {file = "urllib3-1.26.16-py2.py3-none-any.whl", hash = "sha256:8d36afa7616d8ab714608411b4a3b13e58f463aee519024578e062e141dce20f"},
-    {file = "urllib3-1.26.16.tar.gz", hash = "sha256:8f135f6502756bde6b2a9b28989df5fbe87c9970cecaa69041edcce7f0589b14"},
+    {file = "urllib3-1.26.18-py2.py3-none-any.whl", hash = "sha256:34b97092d7e0a3a8cf7cd10e386f401b3737364026c45e622aa02903dffe0f07"},
+    {file = "urllib3-1.26.18.tar.gz", hash = "sha256:f8ecc1bba5667413457c529ab955bf8c67b45db799d159066261719e328580a0"},
 ]
 
 [package.extras]
-brotli = ["brotli (>=1.0.9)", "brotlicffi (>=0.8.0)", "brotlipy (>=0.6.0)"]
+brotli = ["brotli (==1.0.9)", "brotli (>=1.0.9)", "brotlicffi (>=0.8.0)", "brotlipy (>=0.6.0)"]
 secure = ["certifi", "cryptography (>=1.3.4)", "idna (>=2.0.0)", "ipaddress", "pyOpenSSL (>=0.14)", "urllib3-secure-extra"]
 socks = ["PySocks (>=1.5.6,!=1.5.7,<2.0)"]
 
 [[package]]
 name = "werkzeug"
-version = "2.3.7"
+version = "3.0.1"
 description = "The comprehensive WSGI web application library."
-category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "werkzeug-2.3.7-py3-none-any.whl", hash = "sha256:effc12dba7f3bd72e605ce49807bbe692bd729c3bb122a3b91747a6ae77df528"},
-    {file = "werkzeug-2.3.7.tar.gz", hash = "sha256:2b8c0e447b4b9dbcc85dd97b6eeb4dcbaf6c8b6c3be0bd654e25553e0a2157d8"},
+    {file = "werkzeug-3.0.1-py3-none-any.whl", hash = "sha256:90a285dc0e42ad56b34e696398b8122ee4c681833fb35b8334a095d82c56da10"},
+    {file = "werkzeug-3.0.1.tar.gz", hash = "sha256:507e811ecea72b18a404947aded4b3390e1db8f826b494d76550ef45bb3b1dcc"},
 ]
 
 [package.dependencies]
@@ -2432,7 +2404,6 @@ watchdog = ["watchdog (>=2.3)"]
 name = "xlocal"
 version = "0.5"
 description = "execution locals: killing global state (including thread locals)"
-category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2443,7 +2414,6 @@ files = [
 name = "xmltodict"
 version = "0.13.0"
 description = "Makes working with XML feel like you are working with JSON"
-category = "main"
 optional = false
 python-versions = ">=3.4"
 files = [
@@ -2453,21 +2423,20 @@ files = [
 
 [[package]]
 name = "zipp"
-version = "3.16.2"
+version = "3.17.0"
 description = "Backport of pathlib-compatible object wrapper for zip files"
-category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "zipp-3.16.2-py3-none-any.whl", hash = "sha256:679e51dd4403591b2d6838a48de3d283f3d188412a9782faadf845f298736ba0"},
-    {file = "zipp-3.16.2.tar.gz", hash = "sha256:ebc15946aa78bd63458992fc81ec3b6f7b1e92d51c35e6de1c3804e73b799147"},
+    {file = "zipp-3.17.0-py3-none-any.whl", hash = "sha256:0e923e726174922dce09c53c59ad483ff7bbb8e572e00c7f7c46b88556409f31"},
+    {file = "zipp-3.17.0.tar.gz", hash = "sha256:84e64a1c28cf7e91ed2078bb8cc8c259cb19b76942096c8d7b84947690cabaf0"},
 ]
 
 [package.extras]
-docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+docs = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (<7.2.5)", "sphinx (>=3.5)", "sphinx-lint"]
 testing = ["big-O", "jaraco.functools", "jaraco.itertools", "more-itertools", "pytest (>=6)", "pytest-black (>=0.3.7)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-ignore-flaky", "pytest-mypy (>=0.9.1)", "pytest-ruff"]
 
 [metadata]
 lock-version = "2.0"
-python-versions = "3.9.*"
-content-hash = "aba1cefe7719abc6ebb4d30cf5315db77329817626c1ad2f989b0f8ca1a34d05"
\ No newline at end of file
+python-versions = ">=3.9,<3.10"
+content-hash = "24454f7a21f3494fe774e1b51977cee3914c1274ff99f33a1888cbd9cc2b3348"
diff --git a/pyproject.toml b/pyproject.toml
index c96052c1..68d63f55 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "sheepdog"
-version = "5.1.1"
+version = "5.1.2"
 description = "Gen3 Submission Service"
 authors = ["CTDS UChicago <cdis@uchicago.edu>"]
 license = "Apache-2.0"
@@ -10,7 +10,7 @@ include = [
 ]
 
 [tool.poetry.dependencies]
-python = "3.9.*"
+python = ">=3.9,<3.10"
 authlib = "*" # let authutils decide which version we're using
 authutils = ">=6.0.0"
 boto = ">=2.49.0"
@@ -23,8 +23,7 @@ botocore = ">=1.29.71"
 datamodelutils = ">=1.0.0"
 dictionaryutils = ">=3.4.6"
 envelopes = ">=0.4"
-# flask 2.2.0 removes `RequestContext.preserved` which we use in a workaround in `conftest.client`
-Flask = ">=1.1.1,<2.2.0"
+Flask = ">=2.2.5"
 Flask-SQLAlchemy-Session = ">=1.1"
 fuzzywuzzy = ">=0.6.1"
 gen3authz = ">=1.0.4"
@@ -32,7 +31,7 @@ graphene = ">=2.0.1"
 jsonschema = ">=3.2"
 lxml = ">=4.6.5"
 psycopg2 = ">=2.8.4"
-PyYAML = ">=5.4"
+PyYAML = "~5.3.1"
 requests = ">=2.31.0,<3.0.0"
 simplejson = ">=3.8.1"
 sqlalchemy = ">=1.3.*"
@@ -58,7 +57,7 @@ codacy-coverage = ">=1.3.11"
 Sphinx = ">=1.6.5"
 sphinx_rtd_theme = "*"
 flasgger = ">=0.9.1"
-indexd = {git = "https://github.com/uc-cdis/indexd", rev = "4.0.2"}
+indexd = {git = "https://github.com/uc-cdis/indexd", rev = "5.0.3"}
 
 [build-system]
 requires = ["poetry>=0.12"]
diff --git a/tests/conftest.py b/tests/conftest.py
index 4ef3a198..30692b9f 100644
--- a/tests/conftest.py
+++ b/tests/conftest.py
@@ -84,24 +84,6 @@ def submitter_name():
     return SUBMITTER_USERNAME
 
 
-@pytest.fixture
-def client(app):
-    """
-    Overriding the `client` fixture from pytest_flask to fix this bug:
-    https://github.com/pytest-dev/pytest-flask/issues/42
-    Fixed in Flask 1.1.0
-    """
-    with app.test_client() as client:
-        yield client
-
-    while True:
-        top = flask._request_ctx_stack.top
-        if top is not None and top.preserved:
-            top.pop()
-        else:
-            break
-
-
 @pytest.fixture(scope="function")
 def mock_arborist_requests(request):
     """
diff --git a/tests/integration/datadict/submission/test_endpoints.py b/tests/integration/datadict/submission/test_endpoints.py
index a4d708d1..1aa09902 100644
--- a/tests/integration/datadict/submission/test_endpoints.py
+++ b/tests/integration/datadict/submission/test_endpoints.py
@@ -771,6 +771,14 @@ def test_export_entity_by_id(
     assert r.status_code == 200, r.data
     assert r.headers["Content-Disposition"].endswith("tsv")
 
+
+def test_export_entity_by_id_json(
+    client, pg_driver, cgci_blgsp, submitter, require_index_exists_off
+):
+    post_example_entities_together(client, submitter, extended_data_fnames)
+    with pg_driver.session_scope():
+        case_id = pg_driver.nodes(md.Case).first().node_id
+    path = "/v0/submission/CGCI/BLGSP/export/?ids={case_id}".format(case_id=case_id)
     path += "&format=json"
     r = client.get(path, headers=submitter)
     data = r.json
@@ -909,6 +917,7 @@ def test_export_all_node_types_and_resubmit_tsv_with_empty_field(
     print(json.dumps(json.loads(resp.data), indent=4, sort_keys=True))
     assert resp.status_code == 200, resp.data
 
+
 def test_export_node_with_array_json(
     client, pg_driver, cgci_blgsp, require_index_exists_off, submitter
 ):
@@ -924,6 +933,7 @@ def test_export_node_with_array_json(
     assert isinstance(js_data["data"][0]["consent_codes"], list)
     assert len(js_data["data"][0]["consent_codes"]) == len(consent_codes)
 
+
 def test_export_all_node_types_json(
     client, pg_driver, cgci_blgsp, submitter, require_index_exists_off
 ):
diff --git a/tests/integration/datadictwithobjid/submission/test_endpoints.py b/tests/integration/datadictwithobjid/submission/test_endpoints.py
index e6a9e7d6..472d45e5 100644
--- a/tests/integration/datadictwithobjid/submission/test_endpoints.py
+++ b/tests/integration/datadictwithobjid/submission/test_endpoints.py
@@ -637,6 +637,12 @@ def test_export_entity_by_id(client, pg_driver, cgci_blgsp, submitter):
     assert r.status_code == 200, r.data
     assert r.headers["Content-Disposition"].endswith("tsv")
 
+
+def test_export_entity_by_id_json(client, pg_driver, cgci_blgsp, submitter):
+    post_example_entities_together(client, submitter)
+    with pg_driver.session_scope():
+        case_id = pg_driver.nodes(md.Case).first().node_id
+    path = "/v0/submission/CGCI/BLGSP/export/?ids={case_id}".format(case_id=case_id)
     path += "&format=json"
     r = client.get(path, headers=submitter)
     data = r.json