4.23.0

Release Notes

For: uc-cdis/gen3sdk-python

Notes since tag: 4.22.5

Notes to tag/commit: 5d4f75d

Generated: 2024-02-27

New Features

• DRS fields added to record: description, content_created_date,
  content_updated_date (#207)

Dependency Updates

• indexclient (#207)
• drsclient (#207)
• pypfb (#207)
• indexd (#207)

4.22.5

Release Notes

For: uc-cdis/gen3sdk-python

Notes since tag: 4.22.4

Notes to tag/commit: 6350be5

Generated: 2024-02-26

Bug Fixes

• get_token_cache_file_name now uses sha256 for FIPS compliance (#211)

Improvements

• Gen3Submission.submit_record function: log improvement (#210)
• Gen3Submission. delete_records function: early exit when no IDs to submit
  are provided (#210)

4.22.4

Release Notes

For: uc-cdis/gen3sdk-python

Notes since tag: 4.22.3

Notes to tag/commit: 4.22.4

Generated: 2024-02-12

Improvements

• Relaxing manifest schema validation for DRS pull cmds (#206)

4.22.3

Release Notes

For: uc-cdis/gen3sdk-python

Notes since tag: 4.22.2

Notes to tag/commit: 4.22.3

Generated: 2024-02-07

New Features

• dbgap-study-registration now supports finding a given dbgap study's parent
  study, if one exists. (#209)
• Expose gen3users fuctionality (validate and convert) (#203)

Bug Fixes

• Remove confusing error log that occurs using gen3 discovery publish
  (#205)
• Fixes issue with merge_bucket_manifests where the order of input manifests
  would inconsistent (and incorrect) merge behavior. (#196)

Improvements

• Update docs build action so the commit it pushes can trigger other GH
  actions (#208)

4.22.2

pyyaml and pfb fixes

move to GH Actions, update some deps

Release Notes

For: uc-cdis/gen3sdk-python
Notes since tag: 4.22.0
Notes to tag/commit: 0e0bf46
Generated: 2023-10-16

Improvements

• don't try to push docs on master push (#199)
• move unit testing to GH Actions (#198)

Dependency Updates

• update urllib3, pandas and others (#198)

Utils for cascading authorization

Release Notes

For: uc-cdis/gen3sdk-python

Notes since tag: 4.21.0

Notes to tag/commit: 4.22.0

Generated: 2023-09-01

New Features

• Adds support for querying the dbGaP Study Registration API for child
  studies. (#190)

Improvements

• Updates dbgap_study_registration to include the study's accession in
  get_metadata_for_ids return. (#190)

Improved drs-pull

Release Notes

For: uc-cdis/gen3sdk-python
Notes since tag: 4.20.5
Notes to tag/commit: 2c07651
Generated: 2023-08-24

New Features

• new drs-pull objects command which accepts a list of DRS IDs instead of a
  single one like drs-pull object (#195)
• new --silent arg to silence all logging and only let click.echo's
  through to stdout (this enables the ability to ensure a consistent stdout
  response to pipe real consistent results to other commands, e.g. a gen3 --silent drs-pull object dg.4503/foobar | jq will always pipe the JSON
  output into jq (#195)

More DOI resourceType and resourceTypeGeneral fixes

Release Notes

For: uc-cdis/gen3sdk-python

Notes since tag: 4.20.4

Notes to tag/commit: 4.20.5

Generated: 2023-08-22

Bug Fixes

• DOI: resourceType and resourceTypeGeneral are now being correctly
  parsed from datacite response into gen3 metadata (#194)

DOI Type and General Type fixes

Release Notes

For: uc-cdis/gen3sdk-python

Notes since tag: 4.20.3

Notes to tag/commit: 36105c1

Generated: 2023-08-09

Improvements

• DOI: doi_type now is a truly free-text field (#193)

Bug Fixes

• DOI: rename old doi_type to doi_type_general to correctly indicate that is
  a enum field instead of free-text field (#193)
• DOI: fixed the default value for description_type (#193)