diff --git a/tsbrowse/__main__.py b/tsbrowse/__main__.py index 0f1258e..216fe7c 100644 --- a/tsbrowse/__main__.py +++ b/tsbrowse/__main__.py @@ -49,7 +49,13 @@ def cli(): @cli.command() @click.argument("path", type=click.Path(exists=True, dir_okay=False)) -@click.option("--annotations-file", type=click.Path(exists=True, dir_okay=False)) +@click.option( + "--annotations-file", + type=click.Path(exists=True, dir_okay=False), + help="Path to a csv annotations file containing no header and information " + "about each gene on a row in the order: " + "`chr,start,end,strand,ensembl ID,gene name`", +) @click.option("--port", default=8080, help="Port to serve on") @click.option( "--show/--no-show",