diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index 67ca88d..4bae7d7 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -16,7 +16,7 @@ repos:
     -   id: check-toml
 # Python
 -   repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.8.0
+    rev: v0.9.2
     hooks:
     - id: ruff
       args: ["--fix"]
@@ -29,7 +29,7 @@ repos:
       args: ["--write"]
 # C++
 -   repo: https://github.com/pre-commit/mirrors-clang-format
-    rev: v19.1.4
+    rev: v19.1.7
     hooks:
     -   id: clang-format
 # Cython
diff --git a/mddatasetbuilder/datasetbuilder.py b/mddatasetbuilder/datasetbuilder.py
index fe26b8b..6e13a20 100644
--- a/mddatasetbuilder/datasetbuilder.py
+++ b/mddatasetbuilder/datasetbuilder.py
@@ -179,7 +179,7 @@ def builddataset(self, writegjf=True):
                 gc.collect()
                 timearray.append(time.time())
                 logger.info(
-                    f"Step {len(timearray)-1} Done! Time consumed (s): {timearray[-1]-timearray[-2]:.3f}"
+                    f"Step {len(timearray) - 1} Done! Time consumed (s): {timearray[-1] - timearray[-2]:.3f}"
                 )
 
     def _readtimestepsbond(self):
@@ -609,7 +609,7 @@ def _bondtype(self, typebytes):
         if typebytes in self.bondtyperestore:
             return self.bondtyperestore[typebytes]
         typetuple = pickle.loads(typebytes)
-        typestr = f"{typetuple[0]}{''.join(map(str,typetuple[1]))}"
+        typestr = f"{typetuple[0]}{''.join(map(str, typetuple[1]))}"
         self.bondtyperestore[typebytes] = typestr
         return typestr