setup.py

# -*- coding: utf-8 -*-
# Copyright (c) Meta Platforms, Inc. and affiliates.
# All rights reserved.

# This source code is licensed under the license found in the
# LICENSE file in the root directory of this source tree.
# Adapted from https://github.com/facebookresearch/segment-anything

from setuptools import find_packages, setup

setup(
    name="medsam",
    version="0.0.1",
    author="Jun Ma",
    python_requires=">=3.9",
    install_requires=[
        "monai",
        "matplotlib",
        "scikit-image",
        "SimpleITK>=2.2.1",
        "nibabel",
        "tqdm",
        "scipy",
    ],
    packages=find_packages(exclude="notebooks"),
    extras_require={
        "all": ["pycocotools", "opencv-python", "onnx", "onnxruntime"],
        "dev": ["flake8", "isort", "black", "mypy", "pre-commit"],
    },
)