{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":715490477,"defaultBranch":"main","name":"single-cell-transformer-papers","ownerLogin":"theislab","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-11-07T08:50:54.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/22319415?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1699347054.9852831","currentOid":""},"activityList":{"items":[{"before":"fa2fd8ffa02cfe94697eef2737c7338659d1aeee","after":"6a81ed9871278bfebde1f7761c91ffaabcc64444","ref":"refs/heads/main","pushedAt":"2024-09-20T07:50:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add genecompass embedding method","shortMessageHtmlLink":"add genecompass embedding method"}},{"before":"f0b0481d57dccb2890f294d365ad2ed02fb8cd85","after":"fa2fd8ffa02cfe94697eef2737c7338659d1aeee","ref":"refs/heads/main","pushedAt":"2024-08-09T17:14:37.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"update after release","shortMessageHtmlLink":"update after release"}},{"before":"10bac9bf353ab703db8fb3a72ea760de7b04a5b8","after":"f0b0481d57dccb2890f294d365ad2ed02fb8cd85","ref":"refs/heads/main","pushedAt":"2024-08-08T13:31:47.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"update CelWhisperer from paper to preprint status as it's a workshop paper","shortMessageHtmlLink":"update CelWhisperer from paper to preprint status as it's a workshop …"}},{"before":"ebf73b3e11b59435f47eb16e2c1120b9eb3d7428","after":"10bac9bf353ab703db8fb3a72ea760de7b04a5b8","ref":"refs/heads/main","pushedAt":"2024-08-08T13:26:33.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"remove evaluation entry from a method paper","shortMessageHtmlLink":"remove evaluation entry from a method paper"}},{"before":"6fa4c6e5d6d80e4a488d1503c299f04408c3adff","after":"ebf73b3e11b59435f47eb16e2c1120b9eb3d7428","ref":"refs/heads/main","pushedAt":"2024-08-08T13:24:25.000Z","pushType":"pr_merge","commitsCount":3,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"Merge pull request #4 from jkobject/main\n\nadding scPRINT","shortMessageHtmlLink":"Merge pull request #4 from jkobject/main"}},{"before":"e9b4f48f7d0215c3e60df9b88732d7fc09200ecb","after":"6fa4c6e5d6d80e4a488d1503c299f04408c3adff","ref":"refs/heads/main","pushedAt":"2024-08-08T13:07:25.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"move cellwhisperer to the top of the list as the most recent addition","shortMessageHtmlLink":"move cellwhisperer to the top of the list as the most recent addition"}},{"before":"089f3877df44c0f5d9f78cfcbb7f5e414be48b75","after":"e9b4f48f7d0215c3e60df9b88732d7fc09200ecb","ref":"refs/heads/main","pushedAt":"2024-08-08T13:05:41.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"Merge pull request #3 from moritzschaefer/patch-1\n\nAdding CellWhisperer","shortMessageHtmlLink":"Merge pull request #3 from moritzschaefer/patch-1"}},{"before":"b198f1241f7282cc4f4bd651fc979b52a854e19b","after":"089f3877df44c0f5d9f78cfcbb7f5e414be48b75","ref":"refs/heads/main","pushedAt":"2024-07-09T19:36:20.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"reformat table","shortMessageHtmlLink":"reformat table"}},{"before":"b275ec4d8810abf29e30723e418a003aad3cc48d","after":"b198f1241f7282cc4f4bd651fc979b52a854e19b","ref":"refs/heads/main","pushedAt":"2024-07-09T19:35:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"update according to publication","shortMessageHtmlLink":"update according to publication"}},{"before":"5fb32493af1cbf6e8eb8a5cd5be4f7c8fb8aa4a7","after":"b275ec4d8810abf29e30723e418a003aad3cc48d","ref":"refs/heads/main","pushedAt":"2024-04-04T11:07:59.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"readme","shortMessageHtmlLink":"readme"}},{"before":"092596d6094baac99dae92ce5c9975997ca7bbac","after":"5fb32493af1cbf6e8eb8a5cd5be4f7c8fb8aa4a7","ref":"refs/heads/main","pushedAt":"2024-04-04T10:59:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"update gpt for annotation after publication","shortMessageHtmlLink":"update gpt for annotation after publication"}},{"before":"0a0896cf6266f238fbd2df37e20820f486c6b87b","after":"092596d6094baac99dae92ce5c9975997ca7bbac","ref":"refs/heads/main","pushedAt":"2024-03-02T11:52:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"update cellplm after publication","shortMessageHtmlLink":"update cellplm after publication"}},{"before":"1f4d528a95d6effa3df02528b396f46b0f44ef93","after":"0a0896cf6266f238fbd2df37e20820f486c6b87b","ref":"refs/heads/main","pushedAt":"2024-03-01T15:16:02.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"update scGPT after publication","shortMessageHtmlLink":"update scGPT after publication"}},{"before":"3588b63b4dbc19944f0e8147b3850402257ea531","after":"1f4d528a95d6effa3df02528b396f46b0f44ef93","ref":"refs/heads/main","pushedAt":"2024-02-23T23:36:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add information about chatcell retraction","shortMessageHtmlLink":"add information about chatcell retraction"}},{"before":"d99a6b8a54e32a3aec28c2752440681ba013ee7b","after":"3588b63b4dbc19944f0e8147b3850402257ea531","ref":"refs/heads/main","pushedAt":"2024-02-22T10:35:14.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add scInterpreter","shortMessageHtmlLink":"add scInterpreter"}},{"before":"356a27c00f004acaf089d2109d9b34ae510da5a9","after":"d99a6b8a54e32a3aec28c2752440681ba013ee7b","ref":"refs/heads/main","pushedAt":"2024-02-14T12:55:51.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add chatcell","shortMessageHtmlLink":"add chatcell"}},{"before":"2bf1eea6fcaf4a13022e0a833e27f3f853288a92","after":"356a27c00f004acaf089d2109d9b34ae510da5a9","ref":"refs/heads/main","pushedAt":"2024-02-11T13:42:44.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add iSEEEK","shortMessageHtmlLink":"add iSEEEK"}},{"before":"af392b6c3953dbd384861056c05e5ba5d09624e7","after":"2bf1eea6fcaf4a13022e0a833e27f3f853288a92","ref":"refs/heads/main","pushedAt":"2024-02-05T08:41:18.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add MarkerGeneBERT","shortMessageHtmlLink":"add MarkerGeneBERT"}},{"before":"77b72a76fb0aaefebec35636250fe43453a6ee49","after":"af392b6c3953dbd384861056c05e5ba5d09624e7","ref":"refs/heads/main","pushedAt":"2024-01-31T08:43:49.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add PEFT for scGPT","shortMessageHtmlLink":"add PEFT for scGPT"}},{"before":"3b0bfac5d0a82e60b5d84500221f0e430fe14adc","after":"77b72a76fb0aaefebec35636250fe43453a6ee49","ref":"refs/heads/main","pushedAt":"2024-01-30T13:13:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add scMulan","shortMessageHtmlLink":"add scMulan"}},{"before":"c796c04a489817847c1489f32dbb9105977d390b","after":"3b0bfac5d0a82e60b5d84500221f0e430fe14adc","ref":"refs/heads/main","pushedAt":"2023-12-14T10:40:24.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add BioFormers","shortMessageHtmlLink":"add BioFormers"}},{"before":"47ed6071199af8d373eb1fdcc7e7e3038bb2b632","after":"c796c04a489817847c1489f32dbb9105977d390b","ref":"refs/heads/main","pushedAt":"2023-12-14T09:40:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"Update LICENSE","shortMessageHtmlLink":"Update LICENSE"}},{"before":"e114edf4f865dc206ca74beaf08903c17a79f43b","after":"47ed6071199af8d373eb1fdcc7e7e3038bb2b632","ref":"refs/heads/main","pushedAt":"2023-12-13T17:01:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add scELMo","shortMessageHtmlLink":"add scELMo"}},{"before":"1fb676d3bfd502874ae5e7934715b30f9a79e087","after":"e114edf4f865dc206ca74beaf08903c17a79f43b","ref":"refs/heads/main","pushedAt":"2023-12-12T18:38:07.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"Update README.md\n\nadd note on hyperparameters sensitivity","shortMessageHtmlLink":"Update README.md"}},{"before":"8723e438de7f3d5f5d48eacd0c543362f9cb59be","after":"1fb676d3bfd502874ae5e7934715b30f9a79e087","ref":"refs/heads/main","pushedAt":"2023-12-01T14:39:39.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"Update README.md","shortMessageHtmlLink":"Update README.md"}},{"before":"af22514c98069f9942916c11d4175cae131bc54d","after":"8723e438de7f3d5f5d48eacd0c543362f9cb59be","ref":"refs/heads/main","pushedAt":"2023-11-30T18:44:26.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add UCE","shortMessageHtmlLink":"add UCE"}},{"before":"6bc05341ab0a344a6ecb27eb760a7baf68841935","after":"af22514c98069f9942916c11d4175cae131bc54d","ref":"refs/heads/main","pushedAt":"2023-11-26T21:26:31.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"rename transformer models to transformers","shortMessageHtmlLink":"rename transformer models to transformers"}},{"before":"dbb49b685602484673ba661bd3be724c60931bbe","after":"6bc05341ab0a344a6ecb27eb760a7baf68841935","ref":"refs/heads/main","pushedAt":"2023-11-21T23:22:46.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"add scbert eval","shortMessageHtmlLink":"add scbert eval"}},{"before":"5603a8d727bdfc6a052ee2557725d0ad06fba590","after":"dbb49b685602484673ba661bd3be724c60931bbe","ref":"refs/heads/main","pushedAt":"2023-11-21T22:50:11.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"change naming of gene property to gene function","shortMessageHtmlLink":"change naming of gene property to gene function"}},{"before":"ff274be51a60a4c6973cc658e79afed80aa4bfb9","after":"5603a8d727bdfc6a052ee2557725d0ad06fba590","ref":"refs/heads/main","pushedAt":"2023-11-16T11:31:28.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"szalata","name":"Artur Szałata","path":"/szalata","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/17835212?s=80&v=4"},"commit":{"message":"Update README.md\n\nadd notes on the journals","shortMessageHtmlLink":"Update README.md"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0yMFQwNzo1MDoyNS4wMDAwMDBazwAAAAS7r3hK","startCursor":"Y3Vyc29yOnYyOpK7MjAyNC0wOS0yMFQwNzo1MDoyNS4wMDAwMDBazwAAAAS7r3hK","endCursor":"Y3Vyc29yOnYyOpK7MjAyMy0xMS0xNlQxMTozMToyOC4wMDAwMDBazwAAAAOwl3eX"}},"title":"Activity · theislab/single-cell-transformer-papers"}