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Removal of gene version from ensembl IDs broken #712

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le-ander opened this issue Jan 23, 2023 · 0 comments
Open

Removal of gene version from ensembl IDs broken #712

le-ander opened this issue Jan 23, 2023 · 0 comments
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@le-ander
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When running finalize-dataloader on a dataset, zero features get mapped to the reference IDs if feature_id_var_key is set in the yaml and the ensmbl IDs in the adata contain gene versions (eg. ENSG00000131584.19). The version used to be filtered out automatically before and the docstrings/function attributes for the mapping still suggest that this is done. It's however not.

@le-ander le-ander added the bug Something isn't working label Jan 23, 2023
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