diff --git a/README.md b/README.md index a673e88..6835b6a 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-11-13 12:11:07 UTC +2024-11-14 12:11:35 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:----------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| @@ -12,10 +12,9 @@ GitHub Dashboard | [theislab/cellrank](https://github.com/theislab/cellrank) | 347 | 8 | 19 | 46 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/11769788746) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/11769878305) | 82248b | | [theislab/cellrank](https://github.com/theislab/cellrank) | 347 | 8 | 19 | 46 | [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/10872921434) | b5e993 | | [theislab/scib](https://github.com/theislab/scib) | 302 | 14 | 42 | 63 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/10287985783) | 5547cd | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 230 | 5 | 50 | 20 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332275) [![](https://github.com/theislab/ehrapy/workflows/Test/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332282) [![](https://github.com/theislab/ehrapy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332289) [![](https://github.com/theislab/ehrapy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332268) | 4a9e05 | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 230 | 5 | 50 | 20 | [![](https://github.com/theislab/ehrapy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11814181222) | 7434bd | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 230 | 5 | 50 | 20 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10306217903) | e0e081 | -| [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 150 | 5 | 13 | 27 | [![](https://github.com/theislab/zellkonverter/workflows/.github/workflows/check-bioc.yml/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/11791925021) | 37d531 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 230 | 5 | 51 | 20 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332275) | 4a9e05 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 230 | 5 | 51 | 20 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10306217903) | e0e081 | +| [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 150 | 5 | 13 | 28 | [![](https://github.com/theislab/zellkonverter/workflows/.github/workflows/check-bioc.yml/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/11791925021) | 37d531 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 134 | 8 | 167 | 11 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/9457340256) | 55bcbb | | [theislab/sfaira](https://github.com/theislab/sfaira) | 134 | 8 | 167 | 11 | [![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) | 5fcf93 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 134 | 8 | 167 | 11 | [![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) | ceb14c | @@ -23,9 +22,9 @@ GitHub Dashboard | [theislab/moscot](https://github.com/theislab/moscot) | 115 | 3 | 43 | 9 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/10212768708) | 36d93b | | [theislab/ncem](https://github.com/theislab/ncem) | 102 | 6 | 28 | 13 | [![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) | d03a07 | | [theislab/graphcompass](https://github.com/theislab/graphcompass) | 33 | 2 | 1 | 0 | [![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) | 7c4551 | -| [theislab/mubind](https://github.com/theislab/mubind) | 27 | 3 | 29 | 0 | [![](https://github.com/theislab/mubind/workflows/Python%20package/badge.svg)](https://github.com/theislab/mubind/actions/runs/10632591185) | 3f62f8 | +| [theislab/mubind](https://github.com/theislab/mubind) | 28 | 3 | 29 | 0 | [![](https://github.com/theislab/mubind/workflows/Python%20package/badge.svg)](https://github.com/theislab/mubind/actions/runs/10632591185) | 3f62f8 | | [theislab/hadge](https://github.com/theislab/hadge) | 24 | 3 | 14 | 6 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7569650236) | 1ed105 | -| [theislab/spapros](https://github.com/theislab/spapros) | 23 | 3 | 13 | 6 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/11808890587) | e8a37c | +| [theislab/spapros](https://github.com/theislab/spapros) | 23 | 3 | 13 | 6 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/11829018391) | e8a37c | | [theislab/spapros](https://github.com/theislab/spapros) | 23 | 3 | 13 | 6 | [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/11784217131) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/11784217134) | fc6cf6 | | [theislab/multimil](https://github.com/theislab/multimil) | 18 | 5 | 5 | 3 | [![](https://github.com/theislab/multimil/workflows/Check%20Build/badge.svg)](https://github.com/theislab/multimil/actions/runs/11370023712) [![](https://github.com/theislab/multimil/workflows/Test/badge.svg)](https://github.com/theislab/multimil/actions/runs/11624599035) | 445402 | | [theislab/geome](https://github.com/theislab/geome) | 16 | 3 | 3 | 4 | [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/10868284169) | 402a0a | @@ -33,9 +32,9 @@ GitHub Dashboard | [theislab/cellrank2_reproducibility](https://github.com/theislab/cellrank2_reproducibility) | 8 | 1 | 0 | 1 | [![](https://github.com/theislab/cellrank2_reproducibility/workflows/deploy-jupyter-book/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/10706963288) [![](https://github.com/theislab/cellrank2_reproducibility/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank2_reproducibility/actions/runs/10706963242) | 8020e7 | | [theislab/moscot_notebooks](https://github.com/theislab/moscot_notebooks) | 7 | 1 | 6 | 3 | [![](https://github.com/theislab/moscot_notebooks/workflows/lint/badge.svg)](https://github.com/theislab/moscot_notebooks/actions/runs/11769838887) | 210765 | | [theislab/cellrank_notebooks](https://github.com/theislab/cellrank_notebooks) | 6 | 4 | 1 | 5 | [![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) | 677784 | +| [theislab/DRVI](https://github.com/theislab/DRVI) | 6 | 1 | 0 | 0 | [![](https://github.com/theislab/DRVI/workflows/Check%20Build/badge.svg)](https://github.com/theislab/DRVI/actions/runs/11800404797) [![](https://github.com/theislab/DRVI/workflows/Test/badge.svg)](https://github.com/theislab/DRVI/actions/runs/11800404796) | 4d9d01 | | [theislab/ehrapy-datasets](https://github.com/theislab/ehrapy-datasets) | 6 | 2 | 0 | 2 | [![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/8356857136) | e441a5 | -| [theislab/DRVI](https://github.com/theislab/DRVI) | 5 | 1 | 0 | 0 | [![](https://github.com/theislab/DRVI/workflows/Check%20Build/badge.svg)](https://github.com/theislab/DRVI/actions/runs/11800404797) [![](https://github.com/theislab/DRVI/workflows/Test/badge.svg)](https://github.com/theislab/DRVI/actions/runs/11800404796) | 4d9d01 | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 2 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/11816826267) | 209ebe | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 2 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/11836777947) | dbb547 | | [theislab/spatialdata-db](https://github.com/theislab/spatialdata-db) | 1 | 1 | 25 | 0 | [![](https://github.com/theislab/spatialdata-db/workflows/Check%20Build/badge.svg)](https://github.com/theislab/spatialdata-db/actions/runs/11362121634) [![](https://github.com/theislab/spatialdata-db/workflows/Test/badge.svg)](https://github.com/theislab/spatialdata-db/actions/runs/11624599954) | 5fc4ad | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Build%20idtrack%20Package/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702245) [![](https://github.com/theislab/idtrack/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702249) [![](https://github.com/theislab/idtrack/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702241) [![](https://github.com/theislab/idtrack/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702236) [![](https://github.com/theislab/idtrack/workflows/Run%20idtrack%20Tests/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702246) | ec9e9f | @@ -46,13 +45,13 @@ GitHub Dashboard | [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1392 | 30 | 21 | 459 | | [theislab/scarches](https://github.com/theislab/scarches) | 336 | 12 | 52 | 51 | | [theislab/scgen](https://github.com/theislab/scgen) | 266 | 9 | 28 | 56 | -| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 250 | 13 | 28 | 28 | +| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 252 | 13 | 28 | 28 | | [theislab/dca](https://github.com/theislab/dca) | 247 | 11 | 32 | 72 | | [theislab/paga](https://github.com/theislab/paga) | 207 | 10 | 24 | 33 | | [theislab/diffxpy](https://github.com/theislab/diffxpy) | 193 | 7 | 108 | 23 | | [theislab/kBET](https://github.com/theislab/kBET) | 154 | 8 | 9 | 23 | | [theislab/scCODA](https://github.com/theislab/scCODA) | 150 | 9 | 8 | 24 | -| [theislab/sc-pert](https://github.com/theislab/sc-pert) | 142 | 5 | 6 | 12 | +| [theislab/sc-pert](https://github.com/theislab/sc-pert) | 143 | 5 | 6 | 12 | | [theislab/chemCPA](https://github.com/theislab/chemCPA) | 104 | 5 | 10 | 24 | | [theislab/cpa](https://github.com/theislab/cpa) | 88 | 5 | 20 | 17 | | [theislab/destiny](https://github.com/theislab/destiny) | 77 | 5 | 32 | 11 | @@ -109,7 +108,7 @@ GitHub Dashboard | [theislab/2019_Strunz](https://github.com/theislab/2019_Strunz) | 7 | 5 | 1 | 11 | | [theislab/2020_Mayr](https://github.com/theislab/2020_Mayr) | 7 | 6 | 0 | 8 | | [theislab/cpa-reproducibility](https://github.com/theislab/cpa-reproducibility) | 7 | 2 | 1 | 1 | -| [theislab/ehrapy-tutorials](https://github.com/theislab/ehrapy-tutorials) | 7 | 3 | 0 | 2 | +| [theislab/ehrapy-tutorials](https://github.com/theislab/ehrapy-tutorials) | 7 | 3 | 1 | 2 | | [theislab/greatpy](https://github.com/theislab/greatpy) | 7 | 3 | 4 | 0 | | [theislab/mouse_cross-condition_pancreatic_islet_atlas](https://github.com/theislab/mouse_cross-condition_pancreatic_islet_atlas) | 7 | 2 | 0 | 3 | | [theislab/scachepy](https://github.com/theislab/scachepy) | 7 | 5 | 3 | 1 | @@ -175,6 +174,7 @@ GitHub Dashboard | [theislab/bartSeq](https://github.com/theislab/bartSeq) | 1 | 5 | 1 | 5 | | [theislab/bindome](https://github.com/theislab/bindome) | 1 | 3 | 5 | 1 | | [theislab/countae](https://github.com/theislab/countae) | 1 | 4 | 0 | 0 | +| [theislab/DRVI_reproducibility](https://github.com/theislab/DRVI_reproducibility) | 1 | 3 | 0 | 0 | | [theislab/ehrapy-cli](https://github.com/theislab/ehrapy-cli) | 1 | 3 | 0 | 0 | | [theislab/ehrapy-site](https://github.com/theislab/ehrapy-site) | 1 | 2 | 0 | 0 | | [theislab/ifcseq](https://github.com/theislab/ifcseq) | 1 | 3 | 0 | 1 | @@ -193,7 +193,6 @@ GitHub Dashboard | [theislab/collideseq_reproducibility](https://github.com/theislab/collideseq_reproducibility) | 0 | 2 | 0 | 0 | | [theislab/consensus-clustering-evaluation](https://github.com/theislab/consensus-clustering-evaluation) | 0 | 4 | 0 | 0 | | [theislab/dali](https://github.com/theislab/dali) | 0 | 7 | 0 | 1 | -| [theislab/DRVI_reproducibility](https://github.com/theislab/DRVI_reproducibility) | 0 | 3 | 0 | 0 | | [theislab/edgepy](https://github.com/theislab/edgepy) | 0 | 3 | 0 | 0 | | [theislab/ELS_analysis](https://github.com/theislab/ELS_analysis) | 0 | 2 | 0 | 0 | | [theislab/GoBI_single_cell](https://github.com/theislab/GoBI_single_cell) | 0 | 3 | 0 | 0 | diff --git a/index.html b/index.html index b52720f..79ea7af 100644 --- a/index.html +++ b/index.html @@ -49,7 +49,7 @@

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- + + + + + + + + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - + - - - - - - - diff --git a/repos.csv b/repos.csv index 9dcbad7..a30d2ab 100644 --- a/repos.csv +++ b/repos.csv @@ -12,14 +12,14 @@ theislab,2022_Tritschler_pancreas_cross_species,theislab/2022_Tritschler_pancrea theislab,AutoGeneS,theislab/AutoGeneS,56,6,6,8,FALSE,https://github.com/theislab/AutoGeneS,56,NA,NA,NA theislab,CFGen,theislab/CFGen,6,1,1,4,FALSE,https://github.com/theislab/CFGen,6,NA,NA,NA theislab,Covid_meta_analysis,theislab/Covid_meta_analysis,24,8,2,11,FALSE,https://github.com/theislab/Covid_meta_analysis,24,NA,NA,NA -theislab,DRVI,theislab/DRVI,5,1,0,0,FALSE,https://github.com/theislab/DRVI,5,4d9d01a209f9f6fd7bcd0cb3bd01b0dd1ebdc287,"[pre-commit.ci] pre-commit autoupdate (#6) +theislab,DRVI,theislab/DRVI,6,1,0,0,FALSE,https://github.com/theislab/DRVI,6,4d9d01a209f9f6fd7bcd0cb3bd01b0dd1ebdc287,"[pre-commit.ci] pre-commit autoupdate (#6) updates: - [github.com/astral-sh/ruff-pre-commit: v0.5.7 → v0.7.3](https://github.com/astral-sh/ruff-pre-commit/compare/v0.5.7...v0.7.3) - [github.com/pre-commit/pre-commit-hooks: v4.6.0 → v5.0.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.6.0...v5.0.0) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/DRVI/workflows/Check%20Build/badge.svg)](https://github.com/theislab/DRVI/actions/runs/11800404797) [![](https://github.com/theislab/DRVI/workflows/Test/badge.svg)](https://github.com/theislab/DRVI/actions/runs/11800404796) -theislab,DRVI_reproducibility,theislab/DRVI_reproducibility,0,3,0,0,FALSE,https://github.com/theislab/DRVI_reproducibility,0,NA,NA,NA +theislab,DRVI_reproducibility,theislab/DRVI_reproducibility,1,3,0,0,FALSE,https://github.com/theislab/DRVI_reproducibility,1,NA,NA,NA theislab,DeepCollisionalCrossSection,theislab/DeepCollisionalCrossSection,14,5,1,6,FALSE,https://github.com/theislab/DeepCollisionalCrossSection,14,NA,NA,NA theislab,DeepRT,theislab/DeepRT,30,2,11,10,FALSE,https://github.com/theislab/DeepRT,30,NA,NA,NA theislab,ELS_analysis,theislab/ELS_analysis,0,2,0,0,FALSE,https://github.com/theislab/ELS_analysis,0,NA,NA,NA @@ -151,21 +151,20 @@ theislab,diffxpy,theislab/diffxpy,193,7,108,23,FALSE,https://github.com/theislab theislab,diffxpy_tutorials,theislab/diffxpy_tutorials,10,8,4,2,FALSE,https://github.com/theislab/diffxpy_tutorials,10,NA,NA,NA theislab,disent,theislab/disent,6,3,0,0,FALSE,https://github.com/theislab/disent,6,NA,NA,NA theislab,edgepy,theislab/edgepy,0,3,0,0,FALSE,https://github.com/theislab/edgepy,0,NA,NA,NA -theislab,ehrapy,theislab/ehrapy,230,5,50,20,FALSE,https://github.com/theislab/ehrapy,230,4a9e05d25ef443d42038fba1a45f629e15038868,"[pre-commit.ci] pre-commit autoupdate (#823) +theislab,ehrapy,theislab/ehrapy,230,5,51,20,FALSE,https://github.com/theislab/ehrapy,230,4a9e05d25ef443d42038fba1a45f629e15038868,"[pre-commit.ci] pre-commit autoupdate (#823) updates: - [github.com/astral-sh/ruff-pre-commit: v0.7.2 → v0.7.3](https://github.com/astral-sh/ruff-pre-commit/compare/v0.7.2...v0.7.3) -Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332275) [![](https://github.com/theislab/ehrapy/workflows/Test/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332282) [![](https://github.com/theislab/ehrapy/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332289) [![](https://github.com/theislab/ehrapy/workflows/Check%20Build/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332268) -theislab,ehrapy,theislab/ehrapy,230,5,50,20,FALSE,https://github.com/theislab/ehrapy,230,7434bde2f833a0c30dc9b7995b9340d3f0f50cb0,updated notebook,[![](https://github.com/theislab/ehrapy/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11814181222) -theislab,ehrapy,theislab/ehrapy,230,5,50,20,FALSE,https://github.com/theislab/ehrapy,230,e0e081a3308add30d6ba55fcd8b28566e35e9386,Update fig1,[![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10306217903) +Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/11786332275) +theislab,ehrapy,theislab/ehrapy,230,5,51,20,FALSE,https://github.com/theislab/ehrapy,230,e0e081a3308add30d6ba55fcd8b28566e35e9386,Update fig1,[![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10306217903) theislab,ehrapy-cli,theislab/ehrapy-cli,1,3,0,0,FALSE,https://github.com/theislab/ehrapy-cli,1,NA,NA,NA theislab,ehrapy-datasets,theislab/ehrapy-datasets,6,2,0,2,FALSE,https://github.com/theislab/ehrapy-datasets,6,e441a5d0912396064360799f10de973b377ba6a5,"Merge pull request #23 from theislab/diabetes-update change diabetes dataset doc",[![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/8356857136) theislab,ehrapy-reproducibility,theislab/ehrapy-reproducibility,2,1,1,0,FALSE,https://github.com/theislab/ehrapy-reproducibility,2,NA,NA,NA theislab,ehrapy-site,theislab/ehrapy-site,1,2,0,0,FALSE,https://github.com/theislab/ehrapy-site,1,NA,NA,NA -theislab,ehrapy-tutorials,theislab/ehrapy-tutorials,7,3,0,2,FALSE,https://github.com/theislab/ehrapy-tutorials,7,NA,NA,NA +theislab,ehrapy-tutorials,theislab/ehrapy-tutorials,7,3,1,2,FALSE,https://github.com/theislab/ehrapy-tutorials,7,NA,NA,NA theislab,ehrdata,theislab/ehrdata,5,2,23,1,FALSE,https://github.com/theislab/ehrdata,5,NA,NA,NA theislab,enrichment_analysis_celltype,theislab/enrichment_analysis_celltype,9,5,0,4,FALSE,https://github.com/theislab/enrichment_analysis_celltype,9,NA,NA,NA theislab,epicardiods_analysis,theislab/epicardiods_analysis,2,2,1,0,FALSE,https://github.com/theislab/epicardiods_analysis,2,NA,NA,NA @@ -178,7 +177,7 @@ theislab,gastrulation_analysis,theislab/gastrulation_analysis,10,4,0,1,FALSE,htt theislab,geome,theislab/geome,16,3,3,4,FALSE,https://github.com/theislab/geome,16,402a0a8cdb442fee8666416e5f163c4098fa0c07,"Merge pull request #55 from theislab/fix/toarray Fix Sparse "".A"" Not Found",[![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/10868284169) -theislab,gh-dashboard,theislab/gh-dashboard,2,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,2,209ebedd471c7e51786ae47ca004cd75d7888024,[status] 2024-11-12 12:14:03 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/11816826267) +theislab,gh-dashboard,theislab/gh-dashboard,2,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,2,dbb547760c1251da39fb10a9237e9ed41afaac7b,[status] 2024-11-13 12:12:29 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/11836777947) theislab,graph_abstraction,theislab/graph_abstraction,26,8,0,10,FALSE,https://github.com/theislab/graph_abstraction,26,NA,NA,NA theislab,graphcompass,theislab/graphcompass,33,2,1,0,FALSE,https://github.com/theislab/graphcompass,33,7c455146402592d7ba73173a72d2abc4d5f7737b,initial commit,[![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) theislab,greatpy,theislab/greatpy,7,3,4,0,FALSE,https://github.com/theislab/greatpy,7,NA,NA,NA @@ -209,7 +208,7 @@ theislab,moscot_notebooks,theislab/moscot_notebooks,7,1,6,3,FALSE,https://github example on cost geodesic on current example for custom costs",[![](https://github.com/theislab/moscot_notebooks/workflows/lint/badge.svg)](https://github.com/theislab/moscot_notebooks/actions/runs/11769838887) theislab,moslin,theislab/moslin,11,1,0,1,FALSE,https://github.com/theislab/moslin,11,NA,NA,NA theislab,mouse_cross-condition_pancreatic_islet_atlas,theislab/mouse_cross-condition_pancreatic_islet_atlas,7,2,0,3,FALSE,https://github.com/theislab/mouse_cross-condition_pancreatic_islet_atlas,7,NA,NA,NA -theislab,mubind,theislab/mubind,27,3,29,0,FALSE,https://github.com/theislab/mubind,27,3f62f838470ebc499540ff54fb8d074363abd7b6,Dropbox URL (typo),[![](https://github.com/theislab/mubind/workflows/Python%20package/badge.svg)](https://github.com/theislab/mubind/actions/runs/10632591185) +theislab,mubind,theislab/mubind,28,3,29,0,FALSE,https://github.com/theislab/mubind,28,3f62f838470ebc499540ff54fb8d074363abd7b6,Dropbox URL (typo),[![](https://github.com/theislab/mubind/workflows/Python%20package/badge.svg)](https://github.com/theislab/mubind/actions/runs/10632591185) theislab,mubind-benchmark,theislab/mubind-benchmark,0,2,19,0,FALSE,https://github.com/theislab/mubind-benchmark,0,NA,NA,NA theislab,multicpa,theislab/multicpa,13,2,1,2,FALSE,https://github.com/theislab/multicpa,13,NA,NA,NA theislab,multicpa-reproducibility,theislab/multicpa-reproducibility,0,2,0,0,FALSE,https://github.com/theislab/multicpa-reproducibility,0,NA,NA,NA @@ -237,7 +236,7 @@ theislab,pseudodynamics,theislab/pseudodynamics,39,7,0,6,FALSE,https://github.co theislab,reproducability_AutoGeneS,theislab/reproducability_AutoGeneS,0,3,0,0,FALSE,https://github.com/theislab/reproducability_AutoGeneS,0,NA,NA,NA theislab,reproducibility_AutoGeneS,theislab/reproducibility_AutoGeneS,0,3,0,0,FALSE,https://github.com/theislab/reproducibility_AutoGeneS,0,NA,NA,NA theislab,sc-best-practices-ce,theislab/sc-best-practices-ce,8,8,2,3,FALSE,https://github.com/theislab/sc-best-practices-ce,8,NA,NA,NA -theislab,sc-pert,theislab/sc-pert,142,5,6,12,FALSE,https://github.com/theislab/sc-pert,142,NA,NA,NA +theislab,sc-pert,theislab/sc-pert,143,5,6,12,FALSE,https://github.com/theislab/sc-pert,143,NA,NA,NA theislab,scAnalysisTutorial,theislab/scAnalysisTutorial,10,3,0,3,FALSE,https://github.com/theislab/scAnalysisTutorial,10,NA,NA,NA theislab,scArches-reproducibility,theislab/scArches-reproducibility,33,4,5,0,FALSE,https://github.com/theislab/scArches-reproducibility,33,NA,NA,NA theislab,scCODA,theislab/scCODA,150,9,8,24,FALSE,https://github.com/theislab/scCODA,150,NA,NA,NA @@ -340,12 +339,12 @@ theislab,single-cell-best-practices,theislab/single-cell-best-practices,777,19,7 * fix typo * fix typo",[![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292800) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292810) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292801) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/11664292802) -theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,250,13,28,28,FALSE,https://github.com/theislab/single-cell-transformer-papers,250,NA,NA,NA +theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,252,13,28,28,FALSE,https://github.com/theislab/single-cell-transformer-papers,252,NA,NA,NA theislab,single-cell-tutorial,theislab/single-cell-tutorial,1392,30,21,459,FALSE,https://github.com/theislab/single-cell-tutorial,1392,NA,NA,NA theislab,singlecell_proteomics,theislab/singlecell_proteomics,5,5,6,3,FALSE,https://github.com/theislab/singlecell_proteomics,5,NA,NA,NA theislab,spapros,theislab/spapros,23,3,13,6,FALSE,https://github.com/theislab/spapros,23,e8a37c9e78039920a0792fc04f426ab062dbbf88,"Merge pull request #321 from theislab/patch_precommit -pre commit correction of readthedocs.yml",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/11808890587) +pre commit correction of readthedocs.yml",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/11829018391) theislab,spapros,theislab/spapros,23,3,13,6,FALSE,https://github.com/theislab/spapros,23,fc6cf6606de13ae8ba7c1f7ae1e8d350c70e7f13,"[DEPENDABOT]: Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.12.2 Bumps [pypa/gh-action-pypi-publish](https://github.com/pypa/gh-action-pypi-publish) from 1.8.14 to 1.12.2. @@ -387,6 +386,6 @@ theislab,trvaep,theislab/trvaep,9,3,0,5,FALSE,https://github.com/theislab/trvaep theislab,txsim,theislab/txsim,3,2,40,0,FALSE,https://github.com/theislab/txsim,3,NA,NA,NA theislab,unbalanced_monge_maps_single_cell,theislab/unbalanced_monge_maps_single_cell,1,1,0,0,FALSE,https://github.com/theislab/unbalanced_monge_maps_single_cell,1,NA,NA,NA theislab,zebrafish_bipolarity,theislab/zebrafish_bipolarity,1,4,0,1,FALSE,https://github.com/theislab/zebrafish_bipolarity,1,NA,NA,NA -theislab,zellkonverter,theislab/zellkonverter,150,5,13,27,FALSE,https://github.com/theislab/zellkonverter,150,37d531152ef85e26bac2bacb484eea9c4060408f,"Merge pull request #128 from theislab/dependabot/github_actions/JamesIves/github-pages-deploy-action-4.6.9 +theislab,zellkonverter,theislab/zellkonverter,150,5,13,28,FALSE,https://github.com/theislab/zellkonverter,150,37d531152ef85e26bac2bacb484eea9c4060408f,"Merge pull request #128 from theislab/dependabot/github_actions/JamesIves/github-pages-deploy-action-4.6.9 Bump JamesIves/github-pages-deploy-action from 4.6.8 to 4.6.9",[![](https://github.com/theislab/zellkonverter/workflows/.github/workflows/check-bioc.yml/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/11791925021)
theislab/ehrapy 230 55051 20 - - - 4a9e05
theislab/ehrapy 230 550207434bd
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theislab/zellkonverter 150 5 132728 37d531
theislab/sfaira 134 8 55bcbb
theislab/sfaira 134 8 5fcf93
theislab/sfaira 134 8 ceb14c
theislab/anndata2ri 129 7 ebddb6
theislab/moscot 115 3 36d93b
theislab/ncem 102 6 d03a07
theislab/graphcompass 33 2 7c4551
theislab/mubind2728 3 29 0 3f62f8
theislab/hadge 24 3 1ed105
theislab/spapros 23 3 13 6 - e8a37c
theislab/spapros 23 3 fc6cf6
theislab/multimil 18 5 445402
theislab/geome 16 3 402a0a
theislab/scanpydoc 12 6 5e59a6
theislab/cellrank2_reproducibility 8 1 8020e7
theislab/moscot_notebooks 7 1 210765
theislab/cellrank_notebooks 6 4 677784
theislab/ehrapy-datasets6202e441a5
theislab/DRVI56 1 0 0 4d9d01
theislab/ehrapy-datasets6202e441a5
theislab/gh-dashboard 2 2 0 0209ebedbb547
theislab/spatialdata-db 1 1 5fc4ad
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theislab/single-cell-transformer-papers250252 13 28 28
theislab/sc-pert142143 5 6 12 theislab/ehrapy-tutorials 7 301 2
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theislab/ehrapy-clitheislab/DRVI_reproducibility 1 3 0 0
theislab/ehrapy-cli1300
theislab/ehrapy-site 1 2 0 0
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theislab/sc_mae 1 2 0 0
theislab/tardis 1 1 0 1
theislab/tissue_reproducibility 1 3 0 0
theislab/transcription_factor_activity 1 1 5 1
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theislab/edgepy 0