diff --git a/README.md b/README.md index 19b3750..5790009 100644 --- a/README.md +++ b/README.md @@ -2,24 +2,24 @@ GitHub Dashboard ================ ![](https://github.com/gadenbuie/status/workflows/Render%20Status/badge.svg) -2024-09-24 12:10:30 UTC +2024-09-25 12:12:14 UTC | Repo | Stars | Subscribers | Issues | Forks | Status | Commit | |:----------------------------------------------------------------------------------------------|------:|------------:|-------:|------:|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------|:--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------| -| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 737 | 18 | 70 | 173 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279287) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279286) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279290) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279288) | 6ff912 | +| [theislab/single-cell-best-practices](https://github.com/theislab/single-cell-best-practices) | 739 | 18 | 70 | 173 | [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279287) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279286) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279290) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279288) | 6ff912 | | [theislab/scvelo](https://github.com/theislab/scvelo) | 411 | 13 | 60 | 102 | [![](https://github.com/theislab/scvelo/workflows/Release/badge.svg)](https://github.com/theislab/scvelo/actions/runs/8317755189) | b2f31b | | [theislab/scvelo](https://github.com/theislab/scvelo) | 411 | 13 | 60 | 102 | [![](https://github.com/theislab/scvelo/workflows/Check%20Build/badge.svg)](https://github.com/theislab/scvelo/actions/runs/10662690984) [![](https://github.com/theislab/scvelo/workflows/CI/badge.svg)](https://github.com/theislab/scvelo/actions/runs/10662690982) | bef8f1 | | [theislab/cellrank](https://github.com/theislab/cellrank) | 342 | 8 | 17 | 47 | [![](https://github.com/theislab/cellrank/workflows/Test/badge.svg)](https://github.com/theislab/cellrank/actions/runs/10985585866) [![](https://github.com/theislab/cellrank/workflows/Deployment/badge.svg)](https://github.com/theislab/cellrank/actions/runs/10872921434) [![](https://github.com/theislab/cellrank/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank/actions/runs/10985664552) | b5e993 | -| [theislab/scib](https://github.com/theislab/scib) | 293 | 14 | 41 | 62 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/10287985783) | 5547cd | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 189 | 5 | 43 | 18 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 189 | 5 | 43 | 18 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10974410626) | baca22 | -| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 189 | 5 | 43 | 18 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10306217903) | e0e081 | +| [theislab/scib](https://github.com/theislab/scib) | 293 | 14 | 42 | 62 | [![](https://github.com/theislab/scib/workflows/Deployment/badge.svg)](https://github.com/theislab/scib/actions/runs/10287985783) | 5547cd | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 191 | 5 | 43 | 18 | [![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) | 84d33c | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 191 | 5 | 43 | 18 | [![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10974410626) | baca22 | +| [theislab/ehrapy](https://github.com/theislab/ehrapy) | 191 | 5 | 43 | 18 | [![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10306217903) | e0e081 | | [theislab/zellkonverter](https://github.com/theislab/zellkonverter) | 146 | 5 | 27 | 27 | [![](https://github.com/theislab/zellkonverter/workflows/.github/workflows/check-bioc.yml/badge.svg)](https://github.com/theislab/zellkonverter/actions/runs/9611012269) | 328e7e | | [theislab/sfaira](https://github.com/theislab/sfaira) | 134 | 8 | 167 | 11 | [![](https://github.com/theislab/sfaira/workflows/Check%20URLs/badge.svg)](https://github.com/theislab/sfaira/actions/runs/9457340256) | 55bcbb | | [theislab/sfaira](https://github.com/theislab/sfaira) | 134 | 8 | 167 | 11 | [![](https://github.com/theislab/sfaira/workflows/Build%20sfaira%20Package/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672388) [![](https://github.com/theislab/sfaira/workflows/Create%20sfaira%20data-loader%20templates/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672382) [![](https://github.com/theislab/sfaira/workflows/Run%20bandit/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672385) [![](https://github.com/theislab/sfaira/workflows/Run%20flake8%20linting/badge.svg)](https://github.com/theislab/sfaira/actions/runs/7285672384) | 5fcf93 | | [theislab/sfaira](https://github.com/theislab/sfaira) | 134 | 8 | 167 | 11 | [![](https://github.com/theislab/sfaira/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/sfaira/actions/runs/6812817430) | ceb14c | | [theislab/anndata2ri](https://github.com/theislab/anndata2ri) | 124 | 7 | 13 | 16 | [![](https://github.com/theislab/anndata2ri/workflows/Unit%20Tests/badge.svg)](https://github.com/theislab/anndata2ri/actions/runs/11009278931) | 64948a | -| [theislab/moscot](https://github.com/theislab/moscot) | 112 | 3 | 48 | 9 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/10212768708) | 36d93b | +| [theislab/moscot](https://github.com/theislab/moscot) | 112 | 3 | 47 | 9 | [![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/10212768708) | 36d93b | | [theislab/ncem](https://github.com/theislab/ncem) | 102 | 6 | 28 | 13 | [![](https://github.com/theislab/ncem/workflows/Labeler/badge.svg)](https://github.com/theislab/ncem/actions/runs/5392074704) | 216fd5 | | [theislab/ncem](https://github.com/theislab/ncem) | 102 | 6 | 28 | 13 | [![](https://github.com/theislab/ncem/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317399) [![](https://github.com/theislab/ncem/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/ncem/actions/runs/6666317397) | d03a07 | | [theislab/destiny](https://github.com/theislab/destiny) | 75 | 5 | 32 | 12 | [![](https://github.com/theislab/destiny/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/destiny/actions/runs/7347769080) | 300eb2 | @@ -27,7 +27,7 @@ GitHub Dashboard | [theislab/mubind](https://github.com/theislab/mubind) | 26 | 3 | 31 | 0 | [![](https://github.com/theislab/mubind/workflows/Python%20package/badge.svg)](https://github.com/theislab/mubind/actions/runs/10632591185) | 3f62f8 | | [theislab/hadge](https://github.com/theislab/hadge) | 24 | 3 | 14 | 6 | [![](https://github.com/theislab/hadge/workflows/sphinx-docs/badge.svg)](https://github.com/theislab/hadge/actions/runs/7569650236) | 1ed105 | | [theislab/spapros](https://github.com/theislab/spapros) | 23 | 3 | 13 | 6 | [![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/11000497295) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/11000497292) | 5aba91 | -| [theislab/spapros](https://github.com/theislab/spapros) | 23 | 3 | 13 | 6 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/11005316953) | e8a37c | +| [theislab/spapros](https://github.com/theislab/spapros) | 23 | 3 | 13 | 6 | [![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/11024671269) | e8a37c | | [theislab/multimil](https://github.com/theislab/multimil) | 18 | 5 | 4 | 1 | [![](https://github.com/theislab/multimil/workflows/Check%20Build/badge.svg)](https://github.com/theislab/multimil/actions/runs/10163998577) [![](https://github.com/theislab/multimil/workflows/Test/badge.svg)](https://github.com/theislab/multimil/actions/runs/10868285372) | 2bb4f9 | | [theislab/geome](https://github.com/theislab/geome) | 16 | 3 | 3 | 4 | [![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/10868284169) | 402a0a | | [theislab/scanpydoc](https://github.com/theislab/scanpydoc) | 12 | 6 | 3 | 6 | [![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/11009277730) | 9fbe28 | @@ -35,7 +35,7 @@ GitHub Dashboard | [theislab/moscot_notebooks](https://github.com/theislab/moscot_notebooks) | 7 | 1 | 5 | 3 | [![](https://github.com/theislab/moscot_notebooks/workflows/lint/badge.svg)](https://github.com/theislab/moscot_notebooks/actions/runs/10985628743) | 5b9d4e | | [theislab/cellrank_notebooks](https://github.com/theislab/cellrank_notebooks) | 6 | 4 | 1 | 5 | [![](https://github.com/theislab/cellrank_notebooks/workflows/Lint/badge.svg)](https://github.com/theislab/cellrank_notebooks/actions/runs/6686677756) | 677784 | | [theislab/ehrapy-datasets](https://github.com/theislab/ehrapy-datasets) | 5 | 2 | 0 | 2 | [![](https://github.com/theislab/ehrapy-datasets/workflows/Run%20Notebooks/badge.svg)](https://github.com/theislab/ehrapy-datasets/actions/runs/8356857136) | e441a5 | -| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/11013321646) | 4ac3eb | +| [theislab/gh-dashboard](https://github.com/theislab/gh-dashboard) | 1 | 2 | 0 | 0 | [![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/11032575884) | 62f5ad | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Labeler/badge.svg)](https://github.com/theislab/idtrack/actions/runs/5369045662) | 12aa73 | | [theislab/idtrack](https://github.com/theislab/idtrack) | 0 | 1 | 6 | 0 | [![](https://github.com/theislab/idtrack/workflows/Build%20idtrack%20Package/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702245) [![](https://github.com/theislab/idtrack/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702249) [![](https://github.com/theislab/idtrack/workflows/Release%20Drafter/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702241) [![](https://github.com/theislab/idtrack/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702236) [![](https://github.com/theislab/idtrack/workflows/Run%20idtrack%20Tests/badge.svg)](https://github.com/theislab/idtrack/actions/runs/8296702246) | ec9e9f | @@ -43,11 +43,11 @@ GitHub Dashboard | Repo | Stars | Subscribers | Issues | Forks | |:------------------------------------------------------------------------------------------------------------------------------------|------:|------------:|-------:|------:| -| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1357 | 30 | 21 | 453 | -| [theislab/scarches](https://github.com/theislab/scarches) | 329 | 12 | 48 | 51 | +| [theislab/single-cell-tutorial](https://github.com/theislab/single-cell-tutorial) | 1358 | 30 | 21 | 453 | +| [theislab/scarches](https://github.com/theislab/scarches) | 330 | 12 | 48 | 51 | | [theislab/scgen](https://github.com/theislab/scgen) | 261 | 9 | 26 | 53 | -| [theislab/dca](https://github.com/theislab/dca) | 246 | 11 | 31 | 72 | -| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 202 | 10 | 9 | 21 | +| [theislab/dca](https://github.com/theislab/dca) | 247 | 11 | 31 | 72 | +| [theislab/single-cell-transformer-papers](https://github.com/theislab/single-cell-transformer-papers) | 209 | 11 | 6 | 22 | | [theislab/paga](https://github.com/theislab/paga) | 201 | 10 | 23 | 33 | | [theislab/diffxpy](https://github.com/theislab/diffxpy) | 191 | 6 | 108 | 23 | | [theislab/kBET](https://github.com/theislab/kBET) | 153 | 8 | 9 | 23 | @@ -61,7 +61,7 @@ GitHub Dashboard | [theislab/nicheformer](https://github.com/theislab/nicheformer) | 52 | 3 | 14 | 2 | | [theislab/scib-reproducibility](https://github.com/theislab/scib-reproducibility) | 52 | 6 | 3 | 14 | | [theislab/spatial_scog_workshop_2022](https://github.com/theislab/spatial_scog_workshop_2022) | 49 | 9 | 0 | 27 | -| [theislab/scTab](https://github.com/theislab/scTab) | 41 | 3 | 0 | 7 | +| [theislab/scTab](https://github.com/theislab/scTab) | 42 | 3 | 0 | 7 | | [theislab/pseudodynamics](https://github.com/theislab/pseudodynamics) | 39 | 7 | 0 | 6 | | [theislab/tcellmatch](https://github.com/theislab/tcellmatch) | 37 | 9 | 3 | 7 | | [theislab/scArches-reproducibility](https://github.com/theislab/scArches-reproducibility) | 33 | 4 | 5 | 0 | @@ -71,7 +71,7 @@ GitHub Dashboard | [theislab/batchglm](https://github.com/theislab/batchglm) | 27 | 3 | 47 | 9 | | [theislab/graph_abstraction](https://github.com/theislab/graph_abstraction) | 26 | 8 | 0 | 10 | | [theislab/Covid_meta_analysis](https://github.com/theislab/Covid_meta_analysis) | 24 | 8 | 2 | 11 | -| [theislab/prophet](https://github.com/theislab/prophet) | 23 | 5 | 2 | 1 | +| [theislab/prophet](https://github.com/theislab/prophet) | 24 | 5 | 2 | 2 | | [theislab/interactive_plotting](https://github.com/theislab/interactive_plotting) | 21 | 4 | 11 | 7 | | [theislab/scgen-reproducibility](https://github.com/theislab/scgen-reproducibility) | 19 | 4 | 5 | 8 | | [theislab/campa](https://github.com/theislab/campa) | 14 | 4 | 6 | 4 | @@ -90,7 +90,7 @@ GitHub Dashboard | [theislab/diffxpy_tutorials](https://github.com/theislab/diffxpy_tutorials) | 10 | 8 | 4 | 2 | | [theislab/scAnalysisTutorial](https://github.com/theislab/scAnalysisTutorial) | 10 | 3 | 0 | 3 | | [theislab/enrichment_analysis_celltype](https://github.com/theislab/enrichment_analysis_celltype) | 9 | 5 | 0 | 4 | -| [theislab/expiMap_reproducibility](https://github.com/theislab/expiMap_reproducibility) | 9 | 5 | 4 | 4 | +| [theislab/expiMap_reproducibility](https://github.com/theislab/expiMap_reproducibility) | 9 | 5 | 3 | 4 | | [theislab/gastrulation_analysis](https://github.com/theislab/gastrulation_analysis) | 9 | 4 | 0 | 1 | | [theislab/IMPA](https://github.com/theislab/IMPA) | 9 | 2 | 0 | 0 | | [theislab/moslin](https://github.com/theislab/moslin) | 9 | 1 | 0 | 1 | diff --git a/index.html b/index.html index 37c7d5a..e71ea75 100644 --- a/index.html +++ b/index.html @@ -49,7 +49,7 @@

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- + diff --git a/repos.csv b/repos.csv index 26c3866..5496adf 100644 --- a/repos.csv +++ b/repos.csv @@ -135,18 +135,18 @@ theislab,cpa,theislab/cpa,83,5,20,17,FALSE,https://github.com/theislab/cpa,83,NA theislab,cpa-reproducibility,theislab/cpa-reproducibility,7,2,1,1,FALSE,https://github.com/theislab/cpa-reproducibility,7,NA,NA,NA theislab,cross_system_integration,theislab/cross_system_integration,10,2,10,1,FALSE,https://github.com/theislab/cross_system_integration,10,NA,NA,NA theislab,dali,theislab/dali,0,7,0,1,FALSE,https://github.com/theislab/dali,0,NA,NA,NA -theislab,dca,theislab/dca,246,11,31,72,FALSE,https://github.com/theislab/dca,246,NA,NA,NA +theislab,dca,theislab/dca,247,11,31,72,FALSE,https://github.com/theislab/dca,247,NA,NA,NA theislab,deepflow,theislab/deepflow,31,5,1,14,FALSE,https://github.com/theislab/deepflow,31,NA,NA,NA theislab,destiny,theislab/destiny,75,5,32,12,FALSE,https://github.com/theislab/destiny,75,300eb293fb773fb3d667818b946fdd3c62b0aa05,Fix sparse matrix cast and ggplot aes_string deprecations (#65),[![](https://github.com/theislab/destiny/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/theislab/destiny/actions/runs/7347769080) theislab,diffxpy,theislab/diffxpy,191,6,108,23,FALSE,https://github.com/theislab/diffxpy,191,NA,NA,NA theislab,diffxpy_tutorials,theislab/diffxpy_tutorials,10,8,4,2,FALSE,https://github.com/theislab/diffxpy_tutorials,10,NA,NA,NA theislab,disent,theislab/disent,6,3,0,0,FALSE,https://github.com/theislab/disent,6,NA,NA,NA theislab,edgepy,theislab/edgepy,0,3,0,0,FALSE,https://github.com/theislab/edgepy,0,NA,NA,NA -theislab,ehrapy,theislab/ehrapy,189,5,43,18,FALSE,https://github.com/theislab/ehrapy,189,84d33c8988ea560aa557fbe6a99b926befa84457,"Add test windows +theislab,ehrapy,theislab/ehrapy,191,5,43,18,FALSE,https://github.com/theislab/ehrapy,191,84d33c8988ea560aa557fbe6a99b926befa84457,"Add test windows Signed-off-by: zethson ",[![](https://github.com/theislab/ehrapy/workflows/Test%20windows%20stuff/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/5577003787) -theislab,ehrapy,theislab/ehrapy,189,5,43,18,FALSE,https://github.com/theislab/ehrapy,189,baca226621a8f55bf33283eaf63d56b776ae343a,New citation,[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10974410626) -theislab,ehrapy,theislab/ehrapy,189,5,43,18,FALSE,https://github.com/theislab/ehrapy,189,e0e081a3308add30d6ba55fcd8b28566e35e9386,Update fig1,[![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10306217903) +theislab,ehrapy,theislab/ehrapy,191,5,43,18,FALSE,https://github.com/theislab/ehrapy,191,baca226621a8f55bf33283eaf63d56b776ae343a,New citation,[![](https://github.com/theislab/ehrapy/workflows/Labeler/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10974410626) +theislab,ehrapy,theislab/ehrapy,191,5,43,18,FALSE,https://github.com/theislab/ehrapy,191,e0e081a3308add30d6ba55fcd8b28566e35e9386,Update fig1,[![](https://github.com/theislab/ehrapy/workflows/Release/badge.svg)](https://github.com/theislab/ehrapy/actions/runs/10306217903) theislab,ehrapy-cli,theislab/ehrapy-cli,1,3,0,0,FALSE,https://github.com/theislab/ehrapy-cli,1,NA,NA,NA theislab,ehrapy-datasets,theislab/ehrapy-datasets,5,2,0,2,FALSE,https://github.com/theislab/ehrapy-datasets,5,e441a5d0912396064360799f10de973b377ba6a5,"Merge pull request #23 from theislab/diabetes-update @@ -157,7 +157,7 @@ theislab,ehrapy-tutorials,theislab/ehrapy-tutorials,7,3,0,2,FALSE,https://github theislab,ehrdata,theislab/ehrdata,5,3,2,1,FALSE,https://github.com/theislab/ehrdata,5,NA,NA,NA theislab,enrichment_analysis_celltype,theislab/enrichment_analysis_celltype,9,5,0,4,FALSE,https://github.com/theislab/enrichment_analysis_celltype,9,NA,NA,NA theislab,epicardiods_analysis,theislab/epicardiods_analysis,2,2,1,0,FALSE,https://github.com/theislab/epicardiods_analysis,2,NA,NA,NA -theislab,expiMap_reproducibility,theislab/expiMap_reproducibility,9,5,4,4,FALSE,https://github.com/theislab/expiMap_reproducibility,9,NA,NA,NA +theislab,expiMap_reproducibility,theislab/expiMap_reproducibility,9,5,3,4,FALSE,https://github.com/theislab/expiMap_reproducibility,9,NA,NA,NA theislab,extended-single-cell-best-practices-container,theislab/extended-single-cell-best-practices-container,4,4,2,1,FALSE,https://github.com/theislab/extended-single-cell-best-practices-container,4,NA,NA,NA theislab,feature-attribution-sc,theislab/feature-attribution-sc,4,2,8,1,FALSE,https://github.com/theislab/feature-attribution-sc,4,NA,NA,NA theislab,flexible_priors,theislab/flexible_priors,2,2,0,0,FALSE,https://github.com/theislab/flexible_priors,2,NA,NA,NA @@ -166,7 +166,7 @@ theislab,gastrulation_analysis,theislab/gastrulation_analysis,9,4,0,1,FALSE,http theislab,geome,theislab/geome,16,3,3,4,FALSE,https://github.com/theislab/geome,16,402a0a8cdb442fee8666416e5f163c4098fa0c07,"Merge pull request #55 from theislab/fix/toarray Fix Sparse "".A"" Not Found",[![](https://github.com/theislab/geome/workflows/Test/badge.svg)](https://github.com/theislab/geome/actions/runs/10868284169) -theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,4ac3eb2659c2174b89ef1d134309a87af3dd973b,[status] 2024-09-23 12:12:41 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/11013321646) +theislab,gh-dashboard,theislab/gh-dashboard,1,2,0,0,FALSE,https://github.com/theislab/gh-dashboard,1,62f5adeb298d2d843ccfbce9122359eeee7931d0,[status] 2024-09-24 12:12:18 UTC,[![](https://github.com/theislab/gh-dashboard/workflows/Render%20Status/badge.svg)](https://github.com/theislab/gh-dashboard/actions/runs/11032575884) theislab,graph_abstraction,theislab/graph_abstraction,26,8,0,10,FALSE,https://github.com/theislab/graph_abstraction,26,NA,NA,NA theislab,graphcompass,theislab/graphcompass,27,2,2,0,FALSE,https://github.com/theislab/graphcompass,27,7c455146402592d7ba73173a72d2abc4d5f7737b,initial commit,[![](https://github.com/theislab/graphcompass/workflows/Labeler/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989244) [![](https://github.com/theislab/graphcompass/workflows/Release/badge.svg)](https://github.com/theislab/graphcompass/actions/runs/7630989237) theislab,greatpy,theislab/greatpy,8,3,4,0,FALSE,https://github.com/theislab/greatpy,8,NA,NA,NA @@ -189,7 +189,7 @@ theislab,jump-cpg0016-segmentation,theislab/jump-cpg0016-segmentation,7,1,2,0,FA theislab,kBET,theislab/kBET,153,8,9,23,FALSE,https://github.com/theislab/kBET,153,NA,NA,NA theislab,kbranches,theislab/kbranches,5,7,0,0,FALSE,https://github.com/theislab/kbranches,5,NA,NA,NA theislab,masterpraktikum_ssl_segmentation,theislab/masterpraktikum_ssl_segmentation,2,3,0,2,FALSE,https://github.com/theislab/masterpraktikum_ssl_segmentation,2,NA,NA,NA -theislab,moscot,theislab/moscot,112,3,48,9,FALSE,https://github.com/theislab/moscot,112,36d93bf11a407023e622b21aabca032c1885d249,"Merge pull request #737 from theislab/fix/linting_attr +theislab,moscot,theislab/moscot,112,3,47,9,FALSE,https://github.com/theislab/moscot,112,36d93bf11a407023e622b21aabca032c1885d249,"Merge pull request #737 from theislab/fix/linting_attr Fixing Linting and Plotting Error",[![](https://github.com/theislab/moscot/workflows/Deployment/badge.svg)](https://github.com/theislab/moscot/actions/runs/10212768708) theislab,moscot-framework_reproducibility,theislab/moscot-framework_reproducibility,3,2,1,0,FALSE,https://github.com/theislab/moscot-framework_reproducibility,3,NA,NA,NA @@ -226,7 +226,7 @@ theislab,pdac_analysis,theislab/pdac_analysis,0,2,0,0,FALSE,https://github.com/t theislab,pertpy-datasets,theislab/pertpy-datasets,1,3,1,1,FALSE,https://github.com/theislab/pertpy-datasets,1,NA,NA,NA theislab,pertpy-reproducibility,theislab/pertpy-reproducibility,0,2,0,0,FALSE,https://github.com/theislab/pertpy-reproducibility,0,NA,NA,NA theislab,perturbation-metrics,theislab/perturbation-metrics,4,2,1,0,FALSE,https://github.com/theislab/perturbation-metrics,4,NA,NA,NA -theislab,prophet,theislab/prophet,23,5,2,1,FALSE,https://github.com/theislab/prophet,23,NA,NA,NA +theislab,prophet,theislab/prophet,24,5,2,2,FALSE,https://github.com/theislab/prophet,24,NA,NA,NA theislab,prophet-reproducibility,theislab/prophet-reproducibility,0,3,0,0,FALSE,https://github.com/theislab/prophet-reproducibility,0,NA,NA,NA theislab,pseudodynamics,theislab/pseudodynamics,39,7,0,6,FALSE,https://github.com/theislab/pseudodynamics,39,NA,NA,NA theislab,quasiSCVI,theislab/quasiSCVI,0,2,0,0,FALSE,https://github.com/theislab/quasiSCVI,0,NA,NA,NA @@ -241,7 +241,7 @@ theislab,scCODA_reproducibility,theislab/scCODA_reproducibility,8,5,0,1,FALSE,ht theislab,scPoli_legacy,theislab/scPoli_legacy,2,5,0,0,FALSE,https://github.com/theislab/scPoli_legacy,2,NA,NA,NA theislab,scPoli_reproduce,theislab/scPoli_reproduce,13,3,2,4,FALSE,https://github.com/theislab/scPoli_reproduce,13,NA,NA,NA theislab,scProtVelo,theislab/scProtVelo,0,1,0,0,FALSE,https://github.com/theislab/scProtVelo,0,NA,NA,NA -theislab,scTab,theislab/scTab,41,3,0,7,FALSE,https://github.com/theislab/scTab,41,NA,NA,NA +theislab,scTab,theislab/scTab,42,3,0,7,FALSE,https://github.com/theislab/scTab,42,NA,NA,NA theislab,sc_analysis_template,theislab/sc_analysis_template,3,3,0,0,FALSE,https://github.com/theislab/sc_analysis_template,3,NA,NA,NA theislab,sc_ketamine_analysis,theislab/sc_ketamine_analysis,0,4,0,0,FALSE,https://github.com/theislab/sc_ketamine_analysis,0,NA,NA,NA theislab,sc_mae,theislab/sc_mae,1,2,0,0,FALSE,https://github.com/theislab/sc_mae,1,NA,NA,NA @@ -254,12 +254,12 @@ theislab,scanpy_squidpy_demo_2021,theislab/scanpy_squidpy_demo_2021,2,4,0,1,FALS theislab,scanpydoc,theislab/scanpydoc,12,6,3,6,FALSE,https://github.com/theislab/scanpydoc,12,9fbe2813e3fe382192cb3b94a59e81bf44a6d48e,"[pre-commit.ci] pre-commit autoupdate (#175) Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>",[![](https://github.com/theislab/scanpydoc/workflows/Python%20tests/badge.svg)](https://github.com/theislab/scanpydoc/actions/runs/11009277730) -theislab,scarches,theislab/scarches,329,12,48,51,FALSE,https://github.com/theislab/scarches,329,NA,NA,NA +theislab,scarches,theislab/scarches,330,12,48,51,FALSE,https://github.com/theislab/scarches,330,NA,NA,NA theislab,scarches_notebooks,theislab/scarches_notebooks,0,3,0,0,FALSE,https://github.com/theislab/scarches_notebooks,0,NA,NA,NA theislab,scatac_poisson_reproducibility,theislab/scatac_poisson_reproducibility,7,3,0,0,FALSE,https://github.com/theislab/scatac_poisson_reproducibility,7,NA,NA,NA theislab,scgen,theislab/scgen,261,9,26,53,FALSE,https://github.com/theislab/scgen,261,NA,NA,NA theislab,scgen-reproducibility,theislab/scgen-reproducibility,19,4,5,8,FALSE,https://github.com/theislab/scgen-reproducibility,19,NA,NA,NA -theislab,scib,theislab/scib,293,14,41,62,FALSE,https://github.com/theislab/scib,NA,5547cd1f6b24eed7499c6492bf5c1ef4e2ef9f7a,"Skip labels before loop (#394) +theislab,scib,theislab/scib,293,14,42,62,FALSE,https://github.com/theislab/scib,NA,5547cd1f6b24eed7499c6492bf5c1ef4e2ef9f7a,"Skip labels before loop (#394) * Skip labels before loop @@ -283,7 +283,7 @@ theislab,sfaira-site,theislab/sfaira-site,0,4,0,0,FALSE,https://github.com/theis theislab,sfaira_benchmarks,theislab/sfaira_benchmarks,0,3,0,0,FALSE,https://github.com/theislab/sfaira_benchmarks,0,NA,NA,NA theislab,sfaira_extension,theislab/sfaira_extension,0,3,1,0,FALSE,https://github.com/theislab/sfaira_extension,0,NA,NA,NA theislab,sfaira_tutorials,theislab/sfaira_tutorials,6,4,4,2,FALSE,https://github.com/theislab/sfaira_tutorials,6,NA,NA,NA -theislab,single-cell-best-practices,theislab/single-cell-best-practices,737,18,70,173,FALSE,https://github.com/theislab/single-cell-best-practices,737,6ff9120f69edb9444ef14d425ceaaed8da9cc1b0,"Fix comp syntax (#300) +theislab,single-cell-best-practices,theislab/single-cell-best-practices,739,18,70,173,FALSE,https://github.com/theislab/single-cell-best-practices,739,6ff9120f69edb9444ef14d425ceaaed8da9cc1b0,"Fix comp syntax (#300) * New mamba action @@ -294,8 +294,8 @@ Signed-off-by: zethson --------- Signed-off-by: zethson ",[![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20book/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279287) [![](https://github.com/theislab/single-cell-best-practices/workflows/Build%20environments/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279286) [![](https://github.com/theislab/single-cell-best-practices/workflows/Labeler/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279290) [![](https://github.com/theislab/single-cell-best-practices/workflows/pre-commit/badge.svg)](https://github.com/theislab/single-cell-best-practices/actions/runs/10971279288) -theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,202,10,9,21,FALSE,https://github.com/theislab/single-cell-transformer-papers,202,NA,NA,NA -theislab,single-cell-tutorial,theislab/single-cell-tutorial,1357,30,21,453,FALSE,https://github.com/theislab/single-cell-tutorial,1357,NA,NA,NA +theislab,single-cell-transformer-papers,theislab/single-cell-transformer-papers,209,11,6,22,FALSE,https://github.com/theislab/single-cell-transformer-papers,209,NA,NA,NA +theislab,single-cell-tutorial,theislab/single-cell-tutorial,1358,30,21,453,FALSE,https://github.com/theislab/single-cell-tutorial,1358,NA,NA,NA theislab,singlecell_proteomics,theislab/singlecell_proteomics,5,5,6,3,FALSE,https://github.com/theislab/singlecell_proteomics,5,NA,NA,NA theislab,spapros,theislab/spapros,23,3,13,6,FALSE,https://github.com/theislab/spapros,23,5aba91b93aaac8f637a5799ed26cd18ea754ce42,"[DEPENDABOT]: Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.10.2 @@ -313,7 +313,7 @@ updated-dependencies: Signed-off-by: dependabot[bot] ",[![](https://github.com/theislab/spapros/workflows/Build%20Documentation/badge.svg)](https://github.com/theislab/spapros/actions/runs/11000497295) [![](https://github.com/theislab/spapros/workflows/cookietemple%20lint/badge.svg)](https://github.com/theislab/spapros/actions/runs/11000497292) theislab,spapros,theislab/spapros,23,3,13,6,FALSE,https://github.com/theislab/spapros,23,e8a37c9e78039920a0792fc04f426ab062dbbf88,"Merge pull request #321 from theislab/patch_precommit -pre commit correction of readthedocs.yml",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/11005316953) +pre commit correction of readthedocs.yml",[![](https://github.com/theislab/spapros/workflows/Labeler/badge.svg)](https://github.com/theislab/spapros/actions/runs/8661094687) [![](https://github.com/theislab/spapros/workflows/cookietemple%20sync/badge.svg)](https://github.com/theislab/spapros/actions/runs/11024671269) theislab,spapros-pipeline,theislab/spapros-pipeline,7,2,0,0,FALSE,https://github.com/theislab/spapros-pipeline,7,NA,NA,NA theislab,spapros-smk,theislab/spapros-smk,0,2,0,1,FALSE,https://github.com/theislab/spapros-smk,0,NA,NA,NA theislab,spapros_reproducibility,theislab/spapros_reproducibility,0,1,0,1,FALSE,https://github.com/theislab/spapros_reproducibility,0,NA,NA,NA
theislab/single-cell-best-practices737739 18 70 173 theislab/scib 293 144142 62 5547cd
theislab/ehrapy189191 5 43 18
theislab/ehrapy189191 5 43 18
theislab/ehrapy189191 5 43 18 theislab/moscot 112 34847 9 36d93b 13 6 - e8a37c
2 0 04ac3eb62f5ad
theislab/idtrack
theislab/single-cell-tutorial13571358 30 21 453
theislab/scarches329330 12 48 51
theislab/dca246247 11 31 72
theislab/single-cell-transformer-papers2021092120911622
theislab/paga
theislab/scTab4142 3 0 7
theislab/prophet2324 5 212
theislab/interactive_plotting theislab/expiMap_reproducibility 9 543 4