From 9f198d0aca552f05d6c07b5ebbfabbf6b3da3798 Mon Sep 17 00:00:00 2001
From: Florian Goth <florian.goth@uni-wuerzburg.de>
Date: Mon, 27 May 2024 14:56:59 +0200
Subject: [PATCH] another try at the pipeline

---
 build/template.tex | 638 +++++++++++++++++++++++++++++++++++++++++++++
 contributors.yml   | 261 +++++++++++++++++++
 glossary.tex       |  66 +++++
 3 files changed, 965 insertions(+)
 create mode 100644 build/template.tex
 create mode 100644 contributors.yml
 create mode 100644 glossary.tex

diff --git a/build/template.tex b/build/template.tex
new file mode 100644
index 0000000..0751c1b
--- /dev/null
+++ b/build/template.tex
@@ -0,0 +1,638 @@
+% Options for packages loaded elsewhere
+\PassOptionsToPackage{unicode$for(hyperrefoptions)$,$hyperrefoptions$$endfor$}{hyperref}
+\PassOptionsToPackage{hyphens}{url}
+$if(colorlinks)$
+\PassOptionsToPackage{dvipsnames,svgnames,x11names}{xcolor}
+$endif$
+$if(CJKmainfont)$
+\PassOptionsToPackage{space}{xeCJK}
+$endif$
+%
+\documentclass[
+$if(fontsize)$
+  $fontsize$,
+$endif$
+$if(papersize)$
+  $papersize$paper,
+$endif$
+$if(beamer)$
+  ignorenonframetext,
+$if(handout)$
+  handout,
+$endif$
+$if(aspectratio)$
+  aspectratio=$aspectratio$,
+$endif$
+$endif$
+$for(classoption)$
+  $classoption$$sep$,
+$endfor$
+]{$documentclass$}
+$if(beamer)$
+$if(background-image)$
+\usebackgroundtemplate{%
+  \includegraphics[width=\paperwidth]{$background-image$}%
+}
+% In beamer background-image does not work well when other images are used, so this is the workaround
+\pgfdeclareimage[width=\paperwidth,height=\paperheight]{background}{$background-image$}
+\usebackgroundtemplate{\pgfuseimage{background}}
+$endif$
+\usepackage{pgfpages}
+\setbeamertemplate{caption}[numbered]
+\setbeamertemplate{caption label separator}{: }
+\setbeamercolor{caption name}{fg=normal text.fg}
+\beamertemplatenavigationsymbols$if(navigation)$$navigation$$else$empty$endif$
+$for(beameroption)$
+\setbeameroption{$beameroption$}
+$endfor$
+% Prevent slide breaks in the middle of a paragraph
+\widowpenalties 1 10000
+\raggedbottom
+$if(section-titles)$
+\setbeamertemplate{part page}{
+  \centering
+  \begin{beamercolorbox}[sep=16pt,center]{part title}
+    \usebeamerfont{part title}\insertpart\par
+  \end{beamercolorbox}
+}
+\setbeamertemplate{section page}{
+  \centering
+  \begin{beamercolorbox}[sep=12pt,center]{part title}
+    \usebeamerfont{section title}\insertsection\par
+  \end{beamercolorbox}
+}
+\setbeamertemplate{subsection page}{
+  \centering
+  \begin{beamercolorbox}[sep=8pt,center]{part title}
+    \usebeamerfont{subsection title}\insertsubsection\par
+  \end{beamercolorbox}
+}
+\AtBeginPart{
+  \frame{\partpage}
+}
+\AtBeginSection{
+  \ifbibliography
+  \else
+    \frame{\sectionpage}
+  \fi
+}
+\AtBeginSubsection{
+  \frame{\subsectionpage}
+}
+$endif$
+$endif$
+$if(beamerarticle)$
+\usepackage{beamerarticle} % needs to be loaded first
+$endif$
+\usepackage{amsmath,amssymb}
+$if(linestretch)$
+\usepackage{setspace}
+$endif$
+\usepackage{iftex}
+\ifPDFTeX
+  \usepackage[$if(fontenc)$$fontenc$$else$T1$endif$]{fontenc}
+  \usepackage[utf8]{inputenc}
+  \usepackage{textcomp} % provide euro and other symbols
+\else % if luatex or xetex
+$if(mathspec)$
+  \ifXeTeX
+    \usepackage{mathspec} % this also loads fontspec
+  \else
+    \usepackage{unicode-math} % this also loads fontspec
+  \fi
+$else$
+  \usepackage{unicode-math} % this also loads fontspec
+$endif$
+  \defaultfontfeatures{Scale=MatchLowercase}$-- must come before Beamer theme
+  \defaultfontfeatures[\rmfamily]{Ligatures=TeX,Scale=1}
+\fi
+$if(fontfamily)$
+$else$
+$-- Set default font before Beamer theme so the theme can override it
+\usepackage{lmodern}
+$endif$
+$-- Set Beamer theme before user font settings so they can override theme
+$if(beamer)$
+$if(theme)$
+\usetheme[$for(themeoptions)$$themeoptions$$sep$,$endfor$]{$theme$}
+$endif$
+$if(colortheme)$
+\usecolortheme{$colortheme$}
+$endif$
+$if(fonttheme)$
+\usefonttheme{$fonttheme$}
+$endif$
+$if(mainfont)$
+\usefonttheme{serif} % use mainfont rather than sansfont for slide text
+$endif$
+$if(innertheme)$
+\useinnertheme{$innertheme$}
+$endif$
+$if(outertheme)$
+\useoutertheme{$outertheme$}
+$endif$
+$endif$
+$-- User font settings (must come after default font and Beamer theme)
+$if(fontfamily)$
+\usepackage[$for(fontfamilyoptions)$$fontfamilyoptions$$sep$,$endfor$]{$fontfamily$}
+$endif$
+\ifPDFTeX\else
+  % xetex/luatex font selection
+$if(mainfont)$
+  \setmainfont[$for(mainfontoptions)$$mainfontoptions$$sep$,$endfor$]{$mainfont$}
+$endif$
+$if(sansfont)$
+  \setsansfont[$for(sansfontoptions)$$sansfontoptions$$sep$,$endfor$]{$sansfont$}
+$endif$
+$if(monofont)$
+  \setmonofont[$for(monofontoptions)$$monofontoptions$$sep$,$endfor$]{$monofont$}
+$endif$
+$for(fontfamilies)$
+  \newfontfamily{$fontfamilies.name$}[$for(fontfamilies.options)$$fontfamilies.options$$sep$,$endfor$]{$fontfamilies.font$}
+$endfor$
+$if(mathfont)$
+$if(mathspec)$
+  \ifXeTeX
+    \setmathfont(Digits,Latin,Greek)[$for(mathfontoptions)$$mathfontoptions$$sep$,$endfor$]{$mathfont$}
+  \else
+    \setmathfont[$for(mathfontoptions)$$mathfontoptions$$sep$,$endfor$]{$mathfont$}
+  \fi
+$else$
+  \setmathfont[$for(mathfontoptions)$$mathfontoptions$$sep$,$endfor$]{$mathfont$}
+$endif$
+$endif$
+$if(CJKmainfont)$
+  \ifXeTeX
+    \usepackage{xeCJK}
+    \setCJKmainfont[$for(CJKoptions)$$CJKoptions$$sep$,$endfor$]{$CJKmainfont$}
+    $if(CJKsansfont)$
+      \setCJKsansfont[$for(CJKoptions)$$CJKoptions$$sep$,$endfor$]{$CJKsansfont$}
+    $endif$
+    $if(CJKmonofont)$
+      \setCJKmonofont[$for(CJKoptions)$$CJKoptions$$sep$,$endfor$]{$CJKmonofont$}
+    $endif$
+  \fi
+$endif$
+$if(luatexjapresetoptions)$
+  \ifLuaTeX
+    \usepackage[$for(luatexjapresetoptions)$$luatexjapresetoptions$$sep$,$endfor$]{luatexja-preset}
+  \fi
+$endif$
+$if(CJKmainfont)$
+  \ifLuaTeX
+    \usepackage[$for(luatexjafontspecoptions)$$luatexjafontspecoptions$$sep$,$endfor$]{luatexja-fontspec}
+    \setmainjfont[$for(CJKoptions)$$CJKoptions$$sep$,$endfor$]{$CJKmainfont$}
+  \fi
+$endif$
+\fi
+$if(zero-width-non-joiner)$
+%% Support for zero-width non-joiner characters.
+\makeatletter
+\def\zerowidthnonjoiner{%
+  % Prevent ligatures and adjust kerning, but still support hyphenating.
+  \texorpdfstring{%
+    \TextOrMath{\nobreak\discretionary{-}{}{\kern.03em}%
+      \ifvmode\else\nobreak\hskip\z@skip\fi}{}%
+  }{}%
+}
+\makeatother
+\ifPDFTeX
+  \DeclareUnicodeCharacter{200C}{\zerowidthnonjoiner}
+\else
+  \catcode`^^^^200c=\active
+  \protected\def ^^^^200c{\zerowidthnonjoiner}
+\fi
+%% End of ZWNJ support
+$endif$
+% Use upquote if available, for straight quotes in verbatim environments
+\IfFileExists{upquote.sty}{\usepackage{upquote}}{}
+\IfFileExists{microtype.sty}{% use microtype if available
+  \usepackage[$for(microtypeoptions)$$microtypeoptions$$sep$,$endfor$]{microtype}
+  \UseMicrotypeSet[protrusion]{basicmath} % disable protrusion for tt fonts
+}{}
+$if(indent)$
+$else$
+\makeatletter
+\@ifundefined{KOMAClassName}{% if non-KOMA class
+  \IfFileExists{parskip.sty}{%
+    \usepackage{parskip}
+  }{% else
+    \setlength{\parindent}{0pt}
+    \setlength{\parskip}{6pt plus 2pt minus 1pt}}
+}{% if KOMA class
+  \KOMAoptions{parskip=half}}
+\makeatother
+$endif$
+$if(verbatim-in-note)$
+\usepackage{fancyvrb}
+$endif$
+\usepackage{xcolor}
+$if(geometry)$
+$if(beamer)$
+\geometry{$for(geometry)$$geometry$$sep$,$endfor$}
+$else$
+\usepackage[$for(geometry)$$geometry$$sep$,$endfor$]{geometry}
+$endif$
+$endif$
+$if(beamer)$
+\newif\ifbibliography
+$endif$
+$if(listings)$
+\usepackage{listings}
+\newcommand{\passthrough}[1]{#1}
+\lstset{defaultdialect=[5.3]Lua}
+\lstset{defaultdialect=[x86masm]Assembler}
+$endif$
+$if(lhs)$
+\lstnewenvironment{code}{\lstset{language=Haskell,basicstyle=\small\ttfamily}}{}
+$endif$
+$if(highlighting-macros)$
+$highlighting-macros$
+$endif$
+$if(tables)$
+\usepackage{longtable,booktabs,array}
+$if(multirow)$
+\usepackage{multirow}
+$endif$
+\usepackage{calc} % for calculating minipage widths
+$if(beamer)$
+\usepackage{caption}
+% Make caption package work with longtable
+\makeatletter
+\def\fnum@table{\tablename~\thetable}
+\makeatother
+$else$
+% Correct order of tables after \paragraph or \subparagraph
+\usepackage{etoolbox}
+\makeatletter
+\patchcmd\longtable{\par}{\if@noskipsec\mbox{}\fi\par}{}{}
+\makeatother
+% Allow footnotes in longtable head/foot
+\IfFileExists{footnotehyper.sty}{\usepackage{footnotehyper}}{\usepackage{footnote}}
+\makesavenoteenv{longtable}
+$endif$
+$endif$
+$if(graphics)$
+\usepackage{graphicx}
+\makeatletter
+\def\maxwidth{\ifdim\Gin@nat@width>\linewidth\linewidth\else\Gin@nat@width\fi}
+\def\maxheight{\ifdim\Gin@nat@height>\textheight\textheight\else\Gin@nat@height\fi}
+\makeatother
+% Scale images if necessary, so that they will not overflow the page
+% margins by default, and it is still possible to overwrite the defaults
+% using explicit options in \includegraphics[width, height, ...]{}
+\setkeys{Gin}{width=\maxwidth,height=\maxheight,keepaspectratio}
+% Set default figure placement to htbp
+\makeatletter
+\def\fps@figure{htbp}
+\makeatother
+$endif$
+$if(svg)$
+\usepackage{svg}
+$endif$
+$if(strikeout)$
+$-- also used for underline
+\ifLuaTeX
+  \usepackage{luacolor}
+  \usepackage[soul]{lua-ul}
+\else
+  \usepackage{soul}
+$if(CJKmainfont)$
+  \ifXeTeX
+    % soul's \st doesn't work for CJK:
+    \usepackage{xeCJKfntef}
+    \renewcommand{\st}[1]{\sout{#1}}
+  \fi
+$endif$
+\fi
+$endif$
+\setlength{\emergencystretch}{3em} % prevent overfull lines
+\providecommand{\tightlist}{%
+  \setlength{\itemsep}{0pt}\setlength{\parskip}{0pt}}
+$if(numbersections)$
+\setcounter{secnumdepth}{$if(secnumdepth)$$secnumdepth$$else$5$endif$}
+$else$
+\setcounter{secnumdepth}{-\maxdimen} % remove section numbering
+$endif$
+$if(subfigure)$
+\usepackage{subcaption}
+$endif$
+$if(beamer)$
+$else$
+$if(block-headings)$
+% Make \paragraph and \subparagraph free-standing
+\ifx\paragraph\undefined\else
+  \let\oldparagraph\paragraph
+  \renewcommand{\paragraph}[1]{\oldparagraph{#1}\mbox{}}
+\fi
+\ifx\subparagraph\undefined\else
+  \let\oldsubparagraph\subparagraph
+  \renewcommand{\subparagraph}[1]{\oldsubparagraph{#1}\mbox{}}
+\fi
+$endif$
+$endif$
+$if(pagestyle)$
+\pagestyle{$pagestyle$}
+$endif$
+$if(csl-refs)$
+% definitions for citeproc citations
+\NewDocumentCommand\citeproctext{}{}
+\NewDocumentCommand\citeproc{mm}{%
+  \begingroup\def\citeproctext{#2}\cite{#1}\endgroup}
+\makeatletter
+ % allow citations to break across lines
+ \let\@cite@ofmt\@firstofone
+ % avoid brackets around text for \cite:
+ \def\@biblabel#1{}
+ \def\@cite#1#2{{#1\if@tempswa , #2\fi}}
+\makeatother
+\newlength{\cslhangindent}
+\setlength{\cslhangindent}{1.5em}
+\newlength{\csllabelwidth}
+\setlength{\csllabelwidth}{3em}
+\newenvironment{CSLReferences}[2] % #1 hanging-indent, #2 entry-spacing
+ {\begin{list}{}{%
+  \setlength{\itemindent}{0pt}
+  \setlength{\leftmargin}{0pt}
+  \setlength{\parsep}{0pt}
+  % turn on hanging indent if param 1 is 1
+  \ifodd #1
+   \setlength{\leftmargin}{\cslhangindent}
+   \setlength{\itemindent}{-1\cslhangindent}
+  \fi
+  % set entry spacing
+  \setlength{\itemsep}{#2\baselineskip}}}
+ {\end{list}}
+\usepackage{calc}
+\newcommand{\CSLBlock}[1]{\hfill\break#1\hfill\break}
+\newcommand{\CSLLeftMargin}[1]{\parbox[t]{\csllabelwidth}{\strut#1\strut}}
+\newcommand{\CSLRightInline}[1]{\parbox[t]{\linewidth - \csllabelwidth}{\strut#1\strut}}
+\newcommand{\CSLIndent}[1]{\hspace{\cslhangindent}#1}
+$endif$
+$if(lang)$
+\ifLuaTeX
+\usepackage[bidi=basic]{babel}
+\else
+\usepackage[bidi=default]{babel}
+\fi
+$if(babel-lang)$
+\babelprovide[main,import]{$babel-lang$}
+$if(mainfont)$
+\ifPDFTeX
+\else
+\babelfont{rm}[$for(mainfontoptions)$$mainfontoptions$$sep$,$endfor$]{$mainfont$}
+\fi
+$endif$
+$endif$
+$for(babel-otherlangs)$
+\babelprovide[import]{$babel-otherlangs$}
+$endfor$
+$for(babelfonts/pairs)$
+\babelfont[$babelfonts.key$]{rm}{$babelfonts.value$}
+$endfor$
+% get rid of language-specific shorthands (see #6817):
+\let\LanguageShortHands\languageshorthands
+\def\languageshorthands#1{}
+$endif$
+$for(header-includes)$
+$header-includes$
+$endfor$
+\ifLuaTeX
+  \usepackage{selnolig}  % disable illegal ligatures
+\fi
+$if(dir)$
+\ifPDFTeX
+  \TeXXeTstate=1
+  \newcommand{\RL}[1]{\beginR #1\endR}
+  \newcommand{\LR}[1]{\beginL #1\endL}
+  \newenvironment{RTL}{\beginR}{\endR}
+  \newenvironment{LTR}{\beginL}{\endL}
+\fi
+$endif$
+$if(natbib)$
+\usepackage[$natbiboptions$]{natbib}
+\bibliographystyle{$if(biblio-style)$$biblio-style$$else$plainnat$endif$}
+$endif$
+$if(biblatex)$
+\usepackage[$if(biblio-style)$style=$biblio-style$,$endif$$for(biblatexoptions)$$biblatexoptions$$sep$,$endfor$]{biblatex}
+$for(bibliography)$
+\addbibresource{$bibliography$}
+$endfor$
+$endif$
+$if(nocite-ids)$
+\nocite{$for(nocite-ids)$$it$$sep$, $endfor$}
+$endif$
+$if(csquotes)$
+\usepackage{csquotes}
+$endif$
+\usepackage[bottom]{footmisc}
+\IfFileExists{bookmark.sty}{\usepackage{bookmark}}{\usepackage{hyperref}}
+\IfFileExists{xurl.sty}{\usepackage{xurl}}{} % add URL line breaks if available
+\urlstyle{$if(urlstyle)$$urlstyle$$else$same$endif$}
+$if(links-as-notes)$
+% Make links footnotes instead of hotlinks:
+\DeclareRobustCommand{\href}[2]{#2\footnote{\url{#1}}}
+$endif$
+$if(verbatim-in-note)$
+\VerbatimFootnotes % allow verbatim text in footnotes
+$endif$
+\hypersetup{
+$if(title-meta)$
+  pdftitle={$title-meta$},
+$endif$
+$if(author-meta)$
+  pdfauthor={$author-meta$},
+$endif$
+$if(lang)$
+  pdflang={$lang$},
+$endif$
+$if(subject)$
+  pdfsubject={$subject$},
+$endif$
+$if(keywords)$
+  pdfkeywords={$for(keywords)$$keywords$$sep$, $endfor$},
+$endif$
+$if(colorlinks)$
+  colorlinks=true,
+  linkcolor={$if(linkcolor)$$linkcolor$$else$Maroon$endif$},
+  filecolor={$if(filecolor)$$filecolor$$else$Maroon$endif$},
+  citecolor={$if(citecolor)$$citecolor$$else$Blue$endif$},
+  urlcolor={$if(urlcolor)$$urlcolor$$else$Blue$endif$},
+$else$
+$if(boxlinks)$
+$else$
+  hidelinks,
+$endif$
+$endif$
+$if(pdfa-true)$
+$else$
+  pdfcreator={LaTeX via pandoc}
+$endif$
+}
+
+$if(title)$
+\title{$title$$if(thanks)$\thanks{$thanks$}$endif$}
+$endif$
+$if(subtitle)$
+$if(beamer)$
+$else$
+\usepackage{etoolbox}
+\makeatletter
+\providecommand{\subtitle}[1]{% add subtitle to \maketitle
+  \apptocmd{\@title}{\par {\large #1 \par}}{}{}
+}
+\makeatother
+$endif$
+\subtitle{$subtitle$}
+$endif$
+\author{$for(author)$$author$$sep$ \and $endfor$}
+\date{$date$}
+$if(beamer)$
+$if(institute)$
+\institute{$for(institute)$$institute$$sep$ \and $endfor$}
+$endif$
+$if(titlegraphic)$
+\titlegraphic{\includegraphics{$titlegraphic$}}
+$endif$
+$if(logo)$
+\logo{\includegraphics{$logo$}}
+$endif$
+$endif$
+
+
+$if(pdfa-true)$
+\begin{filecontents*}{\jobname.xmpdata}
+\Author{$for(authorxmp)$$authorxmp$$sep$\sep $endfor$}
+$if(title-meta)$
+\Title{$title-meta$}
+$endif$
+$if(lang)$
+\Language{$lang$}
+$else$
+\Language{English}
+$endif$
+$if(subject)$
+\Subject{$subject$}
+$endif$
+$if(keywords)$
+\Keywords{$for(keywords)$$keywords$$sep$\sep $endfor$}
+$endif$
+$if(datexmp)$
+\Date{$datexmp$}
+$endif$
+\PublicationType{journal}
+\end{filecontents*}
+
+% PDF/A compliance with pdfx, must be loaded last (loads hyperref and xcolor)
+\usepackage[a-3u]{pdfx}
+$endif$
+
+\begin{document}
+$if(has-frontmatter)$
+\frontmatter
+$endif$
+$if(title)$
+$if(beamer)$
+\frame{\titlepage}
+$else$
+\maketitle
+$endif$
+$if(abstract)$
+\begin{center}\rule{0.5\linewidth}{0.5pt}\end{center}
+$elseif(keywords)$
+\begin{center}\rule{0.5\linewidth}{0.5pt}\end{center}
+$endif$
+$if(abstract)$
+\textbf{Abstract}: {$abstract$}
+$endif$
+
+$if(keywords)$
+\textbf{Keywords}: {$for(keywords)$$keywords$$sep$, $endfor$}
+$endif$
+$if(abstract)$
+\begin{center}\rule{0.5\linewidth}{0.5pt}\end{center}
+$elseif(keywords)$
+\begin{center}\rule{0.5\linewidth}{0.5pt}\end{center}
+$endif$
+$endif$
+
+$for(include-before)$
+$include-before$
+
+$endfor$
+$if(toc)$
+$if(toc-title)$
+\renewcommand*\contentsname{$toc-title$}
+$endif$
+$if(beamer)$
+\begin{frame}[allowframebreaks]
+$if(toc-title)$
+  \frametitle{$toc-title$}
+$endif$
+  \tableofcontents[hideallsubsections]
+\end{frame}
+$else$
+{
+$if(colorlinks)$
+\hypersetup{linkcolor=$if(toccolor)$$toccolor$$else$$endif$}
+$endif$
+\setcounter{tocdepth}{$toc-depth$}
+$if(toc-baselinestretch)$\renewcommand{\baselinestretch}{$toc-baselinestretch$}\normalsize$endif$
+\tableofcontents
+$if(toc-baselinestretch)$\renewcommand{\baselinestretch}{1.0}\normalsize$endif$
+}
+$endif$
+$endif$
+$if(lof)$
+\listoffigures
+$endif$
+$if(lot)$
+\listoftables
+$endif$
+$if(linestretch)$
+\setstretch{$linestretch$}
+$endif$
+$if(has-frontmatter)$
+\mainmatter
+$endif$
+$body$
+
+$if(has-frontmatter)$
+\backmatter
+$endif$
+$if(natbib)$
+$if(bibliography)$
+$if(biblio-title)$
+$if(has-chapters)$
+\renewcommand\bibname{$biblio-title$}
+$else$
+\renewcommand\refname{$biblio-title$}
+$endif$
+$endif$
+$if(beamer)$
+\begin{frame}[allowframebreaks]{$biblio-title$}
+  \bibliographytrue
+$endif$
+  \bibliography{$for(bibliography)$$bibliography$$sep$,$endfor$}
+$if(beamer)$
+\end{frame}
+$endif$
+
+$endif$
+$endif$
+$if(biblatex)$
+$if(beamer)$
+\begin{frame}[allowframebreaks]{$biblio-title$}
+  \bibliographytrue
+  \printbibliography[heading=none]
+\end{frame}
+$else$
+\printbibliography[heading=bibintoc$if(biblio-title)$,title=$biblio-title$$endif$]
+$endif$
+
+$endif$
+$for(include-after)$
+$include-after$
+
+$endfor$
+\end{document}
diff --git a/contributors.yml b/contributors.yml
new file mode 100644
index 0000000..04db3c6
--- /dev/null
+++ b/contributors.yml
@@ -0,0 +1,261 @@
+authors:
+
+  - author: "Heidi Seibold"
+    firstName: Heidi
+    lastName: Seibold
+    initials: HS
+    affiliations:
+    - IGDORE Munich, Germany
+    orcid: 0000-0002-8960-9642
+    email: heidi@seibold.co
+
+  - author: "Florian Goth"
+    firstName: Florian
+    lastName: Goth
+    initials: FG
+    affiliations:
+      - Institute for Theoretical Physics and Astrophysics, University of Würzburg, Germany
+    orcid: 0000-0003-2707-4790
+    email: florian.goth@uni-wuerzburg.de
+    acknowledgements: |
+      FG acknowledges funding from the Deutsche Forschungsgemeinschaft
+      (DFG, German Research Foundation) through the SFB 1170 “Tocotronics”,
+      project Z03 - project number \geprislink{258499086}.
+
+  - author: "Jan Linxweiler"
+    firstName: Jan
+    lastName: Linxweiler
+    initials: JL
+    affiliations:
+      - Technische Universität Braunschweig, Germany
+    orcid: 0000-0002-2755-5087
+    email: j.linxweiler@tu-braunschweig.de
+
+  - author: "Jan Philipp Thiele"
+    firstName: Jan Philipp
+    lastName: Thiele
+    initials: JPT
+    affiliations:
+      - Weierstrass Institute, Berlin, Germany
+    orcid: 0000-0002-8901-6660
+    email: thiele@wias-berlin.de
+
+  - author: "Jeremy Cohen"
+    firstName: Jeremy
+    lastName: Cohen
+    initials: JC
+    affiliations:
+      - Imperial College London, London, UK
+    orcid: 0000-0003-4312-2537
+    email: jeremy.cohen@imperial.ac.uk
+    acknowledgements: |
+      JC acknowledges support from the UK Engineering and Physical Sciences
+      Research Council (UKRI-EPSRC) under grants EP/R025460/1 and EP/W035731/1.
+
+  - author: "Renato Alves"
+    firstName: Renato
+    lastName: Alves
+    initials: RA
+    affiliations:
+      - European Molecular Biology Laboratory, Heidelberg, Germany
+    orcid: 0000-0002-7212-0234
+    email: renato.alves@embl.de
+
+  - author: "Samantha Wittke"
+    firstName: Samantha
+    lastName: Wittke
+    initials: SW
+    affiliations:
+      - CSC – IT Center for Science, Espoo, Finland
+    orcid: 0000-0002-9625-7235
+    email: samantha.wittke@csc.fi
+
+  - author: "Jean-Noël Grad"
+    firstName: Jean-Noël
+    lastName: Grad
+    initials: JNG
+    affiliations:
+      - Institute for Computational Physics, University of Stuttgart, Germany
+    orcid: 0000-0002-5821-4912
+    email: jgrad@icp.uni-stuttgart.de
+    acknowledgements: |
+      JNG acknowledges funding from the Deutsche Forschungsgemeinschaft
+      (DFG, German Research Foundation) - project number \geprislink{391126171}
+      (PI: Holm) and from the European Union – this work has received funding
+      from the European High Performance Computing Joint Undertaking (JU) and
+      countries participating in the project under grant agreement
+      No [101093169](https://doi.org/10.3030/101093169).
+
+  - author: "Fredo Erxleben"
+    firstName: Fredo
+    lastName: Erxleben
+    initials: FE
+    affiliations:
+      - Helmholtz-Zentrum Dresden-Rossendorf, Germany
+    orcid: 0000-0001-7233-3005
+    email: f.erxleben@hzdr.de
+
+  - author: "Magnus Hagdorn"
+    firstName: Magnus
+    lastName: Hagdorn
+    initials: MH
+    affiliations:
+      - Geschäftsbereich IT, Charité Universitätsmedizin Berlin, Germany
+    orcid: 0000-0002-5076-4864
+    email: magnus.hagdorn@charite.de
+
+  - author: "Moritz Schwarzmeier"
+    firstName: Moritz
+    lastName: Schwarzmeier
+    initials: MS
+    affiliations:
+      - Mathematical Modeling and Analysis, TU Darmstadt, Germany
+    orcid: 0000-0001-8992-6245
+    email: moritz.schwarzmeier@tu-darmstadt.de
+    acknowledgements: |
+      MS would like to thank Hessian Ministry of Higher Education, Research, Science and the Arts
+      and the Federal Government and the Heads of Government of the Länder,
+      as well as the Joint Science Conference (GWK), for their
+      funding and support within the framework of the NFDI4Ing consortium.
+      Part of this work was funded by the German Research Foundation (DFG) - project number
+      \geprislink{442146713}.
+      Part of this work was funded by the Hessian Ministry of Higher Education,
+      Research, Science and the Arts - cluster project Clean Circles.
+
+  - author: "Matthias Braun"
+    firstName: Matthias
+    lastName: Braun
+    initials: MB
+    affiliations:
+      - Cluster of Excellence IntCDC, University of Stuttgart, Germany
+    orcid: 0000-0001-8591-3690
+    email: matthias.braun@intcdc.uni-stuttgart.de
+    acknowledgements: |
+        MB acknowledges support by the Deutsche Forschungsgemeinschaft
+        (DFG, German Research Foundation) under Germany's Excellence Strategy –
+        EXC 2120/1 – \geprislink{390831618}.
+
+  - author: "Harald von Waldow"
+    firstName: Harald
+    lastName: von Waldow
+    initials: HvW
+    affiliations:
+      - Johann Heinrich von Thünen Institute, Centre for Information Management, Germany
+    orcid: 0000-0003-4800-2833
+    email: harald.vonwaldow@thuenen.de
+
+  - author: "Simon Christ"
+    firstName: Simon
+    lastName: Christ
+    initials: SC
+    affiliations:
+      - Leibniz University Hannover, Department of Cell Biology and Biophysics, Computational Biology, Germany
+    orcid: 0000-0002-5866-1472
+    email: christ@cell.uni-hannover.de
+
+  - author: "Gerasimos Chourdakis"
+    firstName: Gerasimos
+    lastName: Chourdakis
+    initials: GC
+    affiliations:
+      - School of Computation, Information and Technology, Technical University of Munich, Garching, Germany
+    orcid: 0000-0002-3977-1385
+    email: gerasimos.chourdakis@tum.de
+
+  - author: "Dominic Kempf"
+    firstName: Dominic
+    lastName: Kempf
+    initials: DK
+    affiliations:
+      - Heidelberg University, Scientific Software Center, Germany
+    orcid: 0000-0002-6140-2332
+    email: dominic.kempf@iwr.uni-heidelberg.de
+    acknowledgements: |
+      DK acknowledges support from the Scientific Software Center which is funded as part
+      of the Excellence Strategy of the German Federal and State Governments.
+
+  - author: "Anna-Lena Lamprecht"
+    firstName: Anna-Lena
+    lastName: Lamprecht
+    initials: ALL
+    affiliations:
+      - Institute of Computer Science, University of Potsdam, Germany
+    orcid: 0000-0003-1953-5606
+    email: anna-lena.lamprecht@uni-potsdam.de
+
+  - author: "Toby Hodges"
+    firstName: Toby
+    lastName: Hodges
+    initials: TH
+    affiliations:
+      - The Carpentries, USA
+    orcid: 0000-0003-1766-456X
+    email: tobyhodges@carpentries.org
+
+  - author: "Leyla Jael Castro"
+    firstName: Leyla Jael
+    lastName: Castro
+    initials: LJC
+    affiliations:
+      - ZB MED Information Centre for Life Sciences, Cologne, Germany
+    orcid: 0000-0003-3986-0510
+    email: ljgarcia@zbmed.de
+    acknowledgements: |
+      LJC acknowledges support from the NFDI4DS consortium funded by the German
+      Research Foundation (DFG) - project number \geprislink{460234259}.
+
+  - author: "Guido Juckeland"
+    firstName: Guido
+    lastName: Juckeland
+    initials: GJ
+    affiliations:
+      - Helmholtz-Zentrum Dresden-Rossendorf, Germany
+    orcid: 0000-0002-9935-4428
+    email: g.juckeland@hzdr.de
+
+  - author: "Stephan Druskat"
+    firstName: Stephan
+    lastName: Druskat
+    initials: SD
+    affiliations:
+      - German Aerospace Center (DLR), Institute for Software Technology, Berlin, Germany
+      - Humboldt-Universität zu Berlin, Department of Computer Science, Berlin, Germany
+    orcid: 0000-0003-4925-7248
+    email: stephan.druskat@dlr.de
+
+  - author: "Frank Löffler"
+    firstName: Frank
+    lastName: Löffler
+    initials: FL
+    affiliations:
+      - Friedrich Schiller University Jena, Jena, Germany
+      - Michael Stifel Center Jena, Jena, Germany
+    orcid: 0000-0001-6643-6323
+    email: frank.loeffler@uni-jena.de
+
+  - author: "Michele Martone"
+    firstName: Michele 
+    lastName: Martone
+    initials: MM
+    affiliations:
+      - Leibniz Supercomputing Centre, Garching, Germany
+    orcid: 0000-0003-3239-8554
+    email: michele.martone@lrz.de
+    acknowledgements: |
+      MM acknowledges funding from the SiVeGCS Project
+
+# please use the following author template (all fields are optional):
+
+#  - author: "F. D. C. Willard, Jr."
+#    firstName: F. D. C.
+#    lastName: Willard
+#    suffixName: Jr.
+#    initials: FDCW
+#    affiliations:
+#      - University of Arcadia
+#      - Michigan State University, East Lansing, Michigan, USA
+#    orcid: 0000-0000-0000-0000
+#    email: willard@u-arcadia.edu
+#    acknowledgements: |
+#      FDCW acknowledges support from the University of Arcadia
+#      under grants UofA/A1234/5 and UofA/A1234/6.
diff --git a/glossary.tex b/glossary.tex
new file mode 100644
index 0000000..f826ef0
--- /dev/null
+++ b/glossary.tex
@@ -0,0 +1,66 @@
+%%%%%%%%%%%%
+% glossary %
+%%%%%%%%%%%%
+
+% programming languages
+\newglossaryentry{COBOL}{name={COBOL},description={business-oriented programming language}}
+\newglossaryentry{Fortran}{name={Fortran},description={general-purpose compiled programming language}}
+\newglossaryentry{Cpp}{name={C++},description={general-purpose compiled programming language}}
+\newglossaryentry{C}{name={C},description={general-purpose compiled programming language}}
+\newglossaryentry{R}{name={R},description={general-purpose scripting language}}
+\newglossaryentry{Python}{name={Python},description={general-purpose scripting language}}
+
+% platforms, services, companies
+\newglossaryentry{GitHub}{name={GitHub},description={online software repository hosting and collaboration platform}}
+\newglossaryentry{GitLab}{name={GitLab},description={online software repository hosting and collaboration platform}}
+
+% software engineering
+\newglossaryentry{design-pattern}{name={design pattern},description={general and reusable solution to solve a \ac{SE} problem (often a best practice, or a ``recipe'')}}
+\newglossaryentry{static-analysis}{name={static analysis},description={automated procedure to detect software bugs in source code without executing the code}}
+
+% other
+\newglossaryentry{SysOp}{name={SysOp},description={system administrator in charge of a computing infrastructure}}
+\newglossaryentry{DevOps}{name={DevOps},description={set of practices and tools for code development and computing infrastructure maintenance}}
+\newglossaryentry{software-publication}{name={software publication},description={the practice of long-term archiving software artifacts with software metadata under a permanent identifier}}
+
+%%%%%%%%%%%%
+% acronyms %
+%%%%%%%%%%%%
+
+% organisations and institutions
+\newacronym{EMBL-EBI}{EMBL-EBI}{European Molecular Biology Laboratory - European Bioinformatics Institute}
+\newacronym{EuroHPC-JU}{EuroHPC JU}{European High-Performance Computing Joint Undertaking}
+\newacronym{UNESCO}{UNESCO}{United Nations Educational, Scientific and Cultural Organization}
+\newacronym{MIT}{MIT}{Massachusetts Institute of Technology}
+\newacronym{ISCB}{ISCB}{International Society for Computational Biology}
+\newacronym{ENCCS}{ENCCS}{EuroCC National Competence Center Sweden}
+\newacronym{PRACE}{PRACE}{Partnership for Advanced Computing in Europe}
+\newacronym[first={German Research Foundation (DFG, Deutsche Forschungsgemeinschaft)}]{DFG}{DFG}{German Research Foundation (Deutsche Forschungsgemeinschaft)}
+\newacronym[first={National Research Data Infrastructure (NFDI, Nationale Forschungsdateninfrastruktur)}]{NFDI}{NFDI}{National Research Data Infrastructure (Nationale Forschungsdateninfrastruktur)}
+\newacronym{UNIVERSE-HPC}{UNIVERSE-HPC}{Understanding and Nurturing an Integrated Vision for Education in RSE and \glsentrytext{HPC}}
+
+% other acronyms
+\newacronym[plural=IDEs,firstplural=integrated development environments (IDE)]{IDE}{IDE}{integrated development environment}
+\newacronym[plural=KPIs,firstplural=key performance indicators (KPIs)]{KPI}{KPI}{key performance indicator}
+\newacronym[plural=LLMs,firstplural={large language models (LLMs)}]{LLM}{LLM}{large language model}
+\newacronym{UML}{UML}{Unified Modelling Language}
+\newacronym{HPC}{HPC}{High-Performance Computing}
+\newacronym{HTC}{HTC}{High-Throughput Computing}
+\newacronym{STEM}{STEM}{science, technology, engineering and mathematics}
+\newacronym{SE}{SE}{software engineering}
+\newacronym{FAIR}{FAIR}{Findability, Accessibility, Interoperability and Reusability}
+\newacronym{IT}{IT}{information technology}
+\newacronym{ML}{ML}{machine learning}
+\newacronym{GPL}{GPL}{General Public License}
+\newacronym{CI}{CI}{continuous integration}
+\newacronym{CD}{CD}{continuous delivery}
+\newacronym{CICD}{CI/CD}{continuous integration and continuous delivery}
+\newacronym{RDM}{RDM}{research data management}
+\newacronym{GDPR}{GDPR}{General Data Protection Regulation}
+\newacronym{PI}{PI}{Principal Investigator}
+\newacronym{TDD}{TDD}{test-driven development}
+\newacronym{HIFIS}{HIFIS}{Helmholtz Federated IT Services}
+\newacronym{DMP}{DMP}{data management plan}
+\newacronym{EU}{EU}{European Union}
+\newacronym{UK}{UK}{United Kingdom}
+\newacronym{GREENER}{GREENER}{Governance, Responsibility, Estimation, Energy and embodied impacts, New collaborations, Education and Research}
\ No newline at end of file