diff --git a/dimensio/404.html b/dimensio/404.html index 0d1b7e6bf..1627c0448 100644 --- a/dimensio/404.html +++ b/dimensio/404.html @@ -13,20 +13,19 @@ - - + + - - - + + + Skip to contents @@ -36,7 +35,7 @@ dimensio - 0.4.1 + 0.5.0 - - - - - -
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Our Pledge

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We as members, contributors, and leaders pledge to make participation in our community a harassment-free experience for everyone, regardless of age, body size, visible or invisible disability, ethnicity, sex characteristics, gender identity and expression, level of experience, education, socio-economic status, nationality, personal appearance, race, caste, color, religion, or sexual identity and orientation.

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We pledge to act and interact in ways that contribute to an open, welcoming, diverse, inclusive, and healthy community.

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Our Standards

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Examples of behavior that contributes to a positive environment for our community include:

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  • Demonstrating empathy and kindness toward other people
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  • Being respectful of differing opinions, viewpoints, and experiences
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  • Giving and gracefully accepting constructive feedback
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  • Accepting responsibility and apologizing to those affected by our mistakes, and learning from the experience
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  • Focusing on what is best not just for us as individuals, but for the overall community
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Examples of unacceptable behavior include:

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  • The use of sexualized language or imagery, and sexual attention or advances of any kind
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  • Trolling, insulting or derogatory comments, and personal or political attacks
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  • Public or private harassment
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  • Publishing others’ private information, such as a physical or email address, without their explicit permission
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  • Other conduct which could reasonably be considered inappropriate in a professional setting
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Enforcement Responsibilities

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Community leaders are responsible for clarifying and enforcing our standards of acceptable behavior and will take appropriate and fair corrective action in response to any behavior that they deem inappropriate, threatening, offensive, or harmful.

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Community leaders have the right and responsibility to remove, edit, or reject comments, commits, code, wiki edits, issues, and other contributions that are not aligned to this Code of Conduct, and will communicate reasons for moderation decisions when appropriate.

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Scope

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This Code of Conduct applies within all community spaces, and also applies when an individual is officially representing the community in public spaces. Examples of representing our community include using an official e-mail address, posting via an official social media account, or acting as an appointed representative at an online or offline event.

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Enforcement

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Instances of abusive, harassing, or otherwise unacceptable behavior may be reported to the community leaders responsible for enforcement at [INSERT CONTACT METHOD]. All complaints will be reviewed and investigated promptly and fairly.

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All community leaders are obligated to respect the privacy and security of the reporter of any incident.

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Enforcement Guidelines

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Community leaders will follow these Community Impact Guidelines in determining the consequences for any action they deem in violation of this Code of Conduct:

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1. Correction

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Community Impact: Use of inappropriate language or other behavior deemed unprofessional or unwelcome in the community.

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Consequence: A private, written warning from community leaders, providing clarity around the nature of the violation and an explanation of why the behavior was inappropriate. A public apology may be requested.

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2. Warning

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Community Impact: A violation through a single incident or series of actions.

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Consequence: A warning with consequences for continued behavior. No interaction with the people involved, including unsolicited interaction with those enforcing the Code of Conduct, for a specified period of time. This includes avoiding interactions in community spaces as well as external channels like social media. Violating these terms may lead to a temporary or permanent ban.

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3. Temporary Ban

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Community Impact: A serious violation of community standards, including sustained inappropriate behavior.

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Consequence: A temporary ban from any sort of interaction or public communication with the community for a specified period of time. No public or private interaction with the people involved, including unsolicited interaction with those enforcing the Code of Conduct, is allowed during this period. Violating these terms may lead to a permanent ban.

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4. Permanent Ban

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Community Impact: Demonstrating a pattern of violation of community standards, including sustained inappropriate behavior, harassment of an individual, or aggression toward or disparagement of classes of individuals.

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Consequence: A permanent ban from any sort of public interaction within the community.

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Attribution

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This Code of Conduct is adapted from the Contributor Covenant, version 2.0, available at https://www.contributor-covenant.org/version/2/0/code_of_conduct.html.

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Community Impact Guidelines were inspired by Mozilla’s code of conduct enforcement ladder.

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For answers to common questions about this code of conduct, see the FAQ at https://www.contributor-covenant.org/faq. Translations are available at https://www.contributor-covenant.org/translations.

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- - - - - - - diff --git a/dimensio/dev/CONTRIBUTING.html b/dimensio/dev/CONTRIBUTING.html deleted file mode 100644 index 7e4d4dbc8..000000000 --- a/dimensio/dev/CONTRIBUTING.html +++ /dev/null @@ -1,105 +0,0 @@ - -Contributing • dimensio - Skip to contents - - -
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This outlines how to propose a change to this package. For more detailed info about contributing to this, and other packages, please see the development contributing guide.

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Fixing typos

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You can fix typos, spelling mistakes, or grammatical errors in the documentation directly using the GitHub web interface, as long as the changes are made in the source file. This generally means you’ll need to edit roxygen2 comments in an .R, not a .Rd file. You can find the .R file that generates the .Rd by reading the comment in the first line.

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Bigger changes

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If you want to make a bigger change, it’s a good idea to first file an issue and make sure someone from the team agrees that it’s needed. If you’ve found a bug, please file an issue that illustrates the bug with a minimal reprex (this will also help you write a unit test, if needed).

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Pull request process

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  • Fork the package and clone onto your computer. If you haven’t done this before, we recommend using usethis::create_from_github("tesselle/PACKAGE", fork = TRUE).
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  • Install all development dependencies with devtools::install_dev_deps(), and then make sure the package passes R CMD check by running devtools::check(). If R CMD check doesn’t pass cleanly, it’s a good idea to ask for help before continuing.
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  • Create a Git branch for your pull request (PR). We recommend using usethis::pr_init("brief-description-of-change").
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  • Make your changes, commit to git, and then create a PR by running usethis::pr_push(), and following the prompts in your browser. The title of your PR should briefly describe the change. The body of your PR should contain Fixes #issue-number.
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  • For user-facing changes, add a bullet to the top of NEWS.md (i.e. just below the first header). Follow the style described in https://www.tesselle.org/style.html.
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Code style

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Code of Conduct

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Please note that this project is released with a Contributor Code of Conduct. By contributing to this project you agree to abide by its terms.

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- - - - - - - diff --git a/dimensio/dev/LICENSE.html b/dimensio/dev/LICENSE.html deleted file mode 100644 index 11d37f191..000000000 --- a/dimensio/dev/LICENSE.html +++ /dev/null @@ -1,271 +0,0 @@ - -GNU General Public License • dimensio - Skip to contents - - -
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Version 3, 29 June 2007
Copyright © 2007 Free Software Foundation, Inc. <http://fsf.org/>

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Everyone is permitted to copy and distribute verbatim copies of this license document, but changing it is not allowed.

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Preamble

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The GNU General Public License is a free, copyleft license for software and other kinds of works.

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The licenses for most software and other practical works are designed to take away your freedom to share and change the works. By contrast, the GNU General Public License is intended to guarantee your freedom to share and change all versions of a program–to make sure it remains free software for all its users. We, the Free Software Foundation, use the GNU General Public License for most of our software; it applies also to any other work released this way by its authors. You can apply it to your programs, too.

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When we speak of free software, we are referring to freedom, not price. Our General Public Licenses are designed to make sure that you have the freedom to distribute copies of free software (and charge for them if you wish), that you receive source code or can get it if you want it, that you can change the software or use pieces of it in new free programs, and that you know you can do these things.

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To protect your rights, we need to prevent others from denying you these rights or asking you to surrender the rights. Therefore, you have certain responsibilities if you distribute copies of the software, or if you modify it: responsibilities to respect the freedom of others.

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For example, if you distribute copies of such a program, whether gratis or for a fee, you must pass on to the recipients the same freedoms that you received. You must make sure that they, too, receive or can get the source code. And you must show them these terms so they know their rights.

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Developers that use the GNU GPL protect your rights with two steps: (1) assert copyright on the software, and (2) offer you this License giving you legal permission to copy, distribute and/or modify it.

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For the developers’ and authors’ protection, the GPL clearly explains that there is no warranty for this free software. For both users’ and authors’ sake, the GPL requires that modified versions be marked as changed, so that their problems will not be attributed erroneously to authors of previous versions.

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Some devices are designed to deny users access to install or run modified versions of the software inside them, although the manufacturer can do so. This is fundamentally incompatible with the aim of protecting users’ freedom to change the software. The systematic pattern of such abuse occurs in the area of products for individuals to use, which is precisely where it is most unacceptable. Therefore, we have designed this version of the GPL to prohibit the practice for those products. If such problems arise substantially in other domains, we stand ready to extend this provision to those domains in future versions of the GPL, as needed to protect the freedom of users.

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Finally, every program is threatened constantly by software patents. States should not allow patents to restrict development and use of software on general-purpose computers, but in those that do, we wish to avoid the special danger that patents applied to a free program could make it effectively proprietary. To prevent this, the GPL assures that patents cannot be used to render the program non-free.

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The precise terms and conditions for copying, distribution and modification follow.

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TERMS AND CONDITIONS

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0. Definitions

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“This License” refers to version 3 of the GNU General Public License.

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“Copyright” also means copyright-like laws that apply to other kinds of works, such as semiconductor masks.

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“The Program” refers to any copyrightable work licensed under this License. Each licensee is addressed as “you”. “Licensees” and “recipients” may be individuals or organizations.

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To “modify” a work means to copy from or adapt all or part of the work in a fashion requiring copyright permission, other than the making of an exact copy. The resulting work is called a “modified version” of the earlier work or a work “based on” the earlier work.

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A “covered work” means either the unmodified Program or a work based on the Program.

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To “propagate” a work means to do anything with it that, without permission, would make you directly or secondarily liable for infringement under applicable copyright law, except executing it on a computer or modifying a private copy. Propagation includes copying, distribution (with or without modification), making available to the public, and in some countries other activities as well.

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To “convey” a work means any kind of propagation that enables other parties to make or receive copies. Mere interaction with a user through a computer network, with no transfer of a copy, is not conveying.

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An interactive user interface displays “Appropriate Legal Notices” to the extent that it includes a convenient and prominently visible feature that (1) displays an appropriate copyright notice, and (2) tells the user that there is no warranty for the work (except to the extent that warranties are provided), that licensees may convey the work under this License, and how to view a copy of this License. If the interface presents a list of user commands or options, such as a menu, a prominent item in the list meets this criterion.

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1. Source Code

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The “source code” for a work means the preferred form of the work for making modifications to it. “Object code” means any non-source form of a work.

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A “Standard Interface” means an interface that either is an official standard defined by a recognized standards body, or, in the case of interfaces specified for a particular programming language, one that is widely used among developers working in that language.

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The “System Libraries” of an executable work include anything, other than the work as a whole, that (a) is included in the normal form of packaging a Major Component, but which is not part of that Major Component, and (b) serves only to enable use of the work with that Major Component, or to implement a Standard Interface for which an implementation is available to the public in source code form. A “Major Component”, in this context, means a major essential component (kernel, window system, and so on) of the specific operating system (if any) on which the executable work runs, or a compiler used to produce the work, or an object code interpreter used to run it.

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The “Corresponding Source” for a work in object code form means all the source code needed to generate, install, and (for an executable work) run the object code and to modify the work, including scripts to control those activities. However, it does not include the work’s System Libraries, or general-purpose tools or generally available free programs which are used unmodified in performing those activities but which are not part of the work. For example, Corresponding Source includes interface definition files associated with source files for the work, and the source code for shared libraries and dynamically linked subprograms that the work is specifically designed to require, such as by intimate data communication or control flow between those subprograms and other parts of the work.

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The Corresponding Source need not include anything that users can regenerate automatically from other parts of the Corresponding Source.

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The Corresponding Source for a work in source code form is that same work.

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2. Basic Permissions

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All rights granted under this License are granted for the term of copyright on the Program, and are irrevocable provided the stated conditions are met. This License explicitly affirms your unlimited permission to run the unmodified Program. The output from running a covered work is covered by this License only if the output, given its content, constitutes a covered work. This License acknowledges your rights of fair use or other equivalent, as provided by copyright law.

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You may make, run and propagate covered works that you do not convey, without conditions so long as your license otherwise remains in force. You may convey covered works to others for the sole purpose of having them make modifications exclusively for you, or provide you with facilities for running those works, provided that you comply with the terms of this License in conveying all material for which you do not control copyright. Those thus making or running the covered works for you must do so exclusively on your behalf, under your direction and control, on terms that prohibit them from making any copies of your copyrighted material outside their relationship with you.

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Conveying under any other circumstances is permitted solely under the conditions stated below. Sublicensing is not allowed; section 10 makes it unnecessary.

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No covered work shall be deemed part of an effective technological measure under any applicable law fulfilling obligations under article 11 of the WIPO copyright treaty adopted on 20 December 1996, or similar laws prohibiting or restricting circumvention of such measures.

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When you convey a covered work, you waive any legal power to forbid circumvention of technological measures to the extent such circumvention is effected by exercising rights under this License with respect to the covered work, and you disclaim any intention to limit operation or modification of the work as a means of enforcing, against the work’s users, your or third parties’ legal rights to forbid circumvention of technological measures.

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4. Conveying Verbatim Copies

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You may convey verbatim copies of the Program’s source code as you receive it, in any medium, provided that you conspicuously and appropriately publish on each copy an appropriate copyright notice; keep intact all notices stating that this License and any non-permissive terms added in accord with section 7 apply to the code; keep intact all notices of the absence of any warranty; and give all recipients a copy of this License along with the Program.

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You may charge any price or no price for each copy that you convey, and you may offer support or warranty protection for a fee.

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5. Conveying Modified Source Versions

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You may convey a work based on the Program, or the modifications to produce it from the Program, in the form of source code under the terms of section 4, provided that you also meet all of these conditions:

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  • -a) The work must carry prominent notices stating that you modified it, and giving a relevant date.
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  • -b) The work must carry prominent notices stating that it is released under this License and any conditions added under section 7. This requirement modifies the requirement in section 4 to “keep intact all notices”.
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  • -c) You must license the entire work, as a whole, under this License to anyone who comes into possession of a copy. This License will therefore apply, along with any applicable section 7 additional terms, to the whole of the work, and all its parts, regardless of how they are packaged. This License gives no permission to license the work in any other way, but it does not invalidate such permission if you have separately received it.
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  • -d) If the work has interactive user interfaces, each must display Appropriate Legal Notices; however, if the Program has interactive interfaces that do not display Appropriate Legal Notices, your work need not make them do so.
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A compilation of a covered work with other separate and independent works, which are not by their nature extensions of the covered work, and which are not combined with it such as to form a larger program, in or on a volume of a storage or distribution medium, is called an “aggregate” if the compilation and its resulting copyright are not used to limit the access or legal rights of the compilation’s users beyond what the individual works permit. Inclusion of a covered work in an aggregate does not cause this License to apply to the other parts of the aggregate.

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6. Conveying Non-Source Forms

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You may convey a covered work in object code form under the terms of sections 4 and 5, provided that you also convey the machine-readable Corresponding Source under the terms of this License, in one of these ways:

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  • -a) Convey the object code in, or embodied in, a physical product (including a physical distribution medium), accompanied by the Corresponding Source fixed on a durable physical medium customarily used for software interchange.
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  • -b) Convey the object code in, or embodied in, a physical product (including a physical distribution medium), accompanied by a written offer, valid for at least three years and valid for as long as you offer spare parts or customer support for that product model, to give anyone who possesses the object code either (1) a copy of the Corresponding Source for all the software in the product that is covered by this License, on a durable physical medium customarily used for software interchange, for a price no more than your reasonable cost of physically performing this conveying of source, or (2) access to copy the Corresponding Source from a network server at no charge.
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  • -c) Convey individual copies of the object code with a copy of the written offer to provide the Corresponding Source. This alternative is allowed only occasionally and noncommercially, and only if you received the object code with such an offer, in accord with subsection 6b.
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  • -d) Convey the object code by offering access from a designated place (gratis or for a charge), and offer equivalent access to the Corresponding Source in the same way through the same place at no further charge. You need not require recipients to copy the Corresponding Source along with the object code. If the place to copy the object code is a network server, the Corresponding Source may be on a different server (operated by you or a third party) that supports equivalent copying facilities, provided you maintain clear directions next to the object code saying where to find the Corresponding Source. Regardless of what server hosts the Corresponding Source, you remain obligated to ensure that it is available for as long as needed to satisfy these requirements.
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  • -e) Convey the object code using peer-to-peer transmission, provided you inform other peers where the object code and Corresponding Source of the work are being offered to the general public at no charge under subsection 6d.
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A separable portion of the object code, whose source code is excluded from the Corresponding Source as a System Library, need not be included in conveying the object code work.

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A “User Product” is either (1) a “consumer product”, which means any tangible personal property which is normally used for personal, family, or household purposes, or (2) anything designed or sold for incorporation into a dwelling. In determining whether a product is a consumer product, doubtful cases shall be resolved in favor of coverage. For a particular product received by a particular user, “normally used” refers to a typical or common use of that class of product, regardless of the status of the particular user or of the way in which the particular user actually uses, or expects or is expected to use, the product. A product is a consumer product regardless of whether the product has substantial commercial, industrial or non-consumer uses, unless such uses represent the only significant mode of use of the product.

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“Installation Information” for a User Product means any methods, procedures, authorization keys, or other information required to install and execute modified versions of a covered work in that User Product from a modified version of its Corresponding Source. The information must suffice to ensure that the continued functioning of the modified object code is in no case prevented or interfered with solely because modification has been made.

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If you convey an object code work under this section in, or with, or specifically for use in, a User Product, and the conveying occurs as part of a transaction in which the right of possession and use of the User Product is transferred to the recipient in perpetuity or for a fixed term (regardless of how the transaction is characterized), the Corresponding Source conveyed under this section must be accompanied by the Installation Information. But this requirement does not apply if neither you nor any third party retains the ability to install modified object code on the User Product (for example, the work has been installed in ROM).

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The requirement to provide Installation Information does not include a requirement to continue to provide support service, warranty, or updates for a work that has been modified or installed by the recipient, or for the User Product in which it has been modified or installed. Access to a network may be denied when the modification itself materially and adversely affects the operation of the network or violates the rules and protocols for communication across the network.

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Corresponding Source conveyed, and Installation Information provided, in accord with this section must be in a format that is publicly documented (and with an implementation available to the public in source code form), and must require no special password or key for unpacking, reading or copying.

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7. Additional Terms

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“Additional permissions” are terms that supplement the terms of this License by making exceptions from one or more of its conditions. Additional permissions that are applicable to the entire Program shall be treated as though they were included in this License, to the extent that they are valid under applicable law. If additional permissions apply only to part of the Program, that part may be used separately under those permissions, but the entire Program remains governed by this License without regard to the additional permissions.

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When you convey a copy of a covered work, you may at your option remove any additional permissions from that copy, or from any part of it. (Additional permissions may be written to require their own removal in certain cases when you modify the work.) You may place additional permissions on material, added by you to a covered work, for which you have or can give appropriate copyright permission.

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Notwithstanding any other provision of this License, for material you add to a covered work, you may (if authorized by the copyright holders of that material) supplement the terms of this License with terms:

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  • -a) Disclaiming warranty or limiting liability differently from the terms of sections 15 and 16 of this License; or
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  • -b) Requiring preservation of specified reasonable legal notices or author attributions in that material or in the Appropriate Legal Notices displayed by works containing it; or
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  • -c) Prohibiting misrepresentation of the origin of that material, or requiring that modified versions of such material be marked in reasonable ways as different from the original version; or
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  • -d) Limiting the use for publicity purposes of names of licensors or authors of the material; or
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  • -e) Declining to grant rights under trademark law for use of some trade names, trademarks, or service marks; or
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  • -f) Requiring indemnification of licensors and authors of that material by anyone who conveys the material (or modified versions of it) with contractual assumptions of liability to the recipient, for any liability that these contractual assumptions directly impose on those licensors and authors.
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All other non-permissive additional terms are considered “further restrictions” within the meaning of section 10. If the Program as you received it, or any part of it, contains a notice stating that it is governed by this License along with a term that is a further restriction, you may remove that term. If a license document contains a further restriction but permits relicensing or conveying under this License, you may add to a covered work material governed by the terms of that license document, provided that the further restriction does not survive such relicensing or conveying.

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If you add terms to a covered work in accord with this section, you must place, in the relevant source files, a statement of the additional terms that apply to those files, or a notice indicating where to find the applicable terms.

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Additional terms, permissive or non-permissive, may be stated in the form of a separately written license, or stated as exceptions; the above requirements apply either way.

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8. Termination

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You may not propagate or modify a covered work except as expressly provided under this License. Any attempt otherwise to propagate or modify it is void, and will automatically terminate your rights under this License (including any patent licenses granted under the third paragraph of section 11).

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However, if you cease all violation of this License, then your license from a particular copyright holder is reinstated (a) provisionally, unless and until the copyright holder explicitly and finally terminates your license, and (b) permanently, if the copyright holder fails to notify you of the violation by some reasonable means prior to 60 days after the cessation.

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Moreover, your license from a particular copyright holder is reinstated permanently if the copyright holder notifies you of the violation by some reasonable means, this is the first time you have received notice of violation of this License (for any work) from that copyright holder, and you cure the violation prior to 30 days after your receipt of the notice.

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Termination of your rights under this section does not terminate the licenses of parties who have received copies or rights from you under this License. If your rights have been terminated and not permanently reinstated, you do not qualify to receive new licenses for the same material under section 10.

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9. Acceptance Not Required for Having Copies

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You are not required to accept this License in order to receive or run a copy of the Program. Ancillary propagation of a covered work occurring solely as a consequence of using peer-to-peer transmission to receive a copy likewise does not require acceptance. However, nothing other than this License grants you permission to propagate or modify any covered work. These actions infringe copyright if you do not accept this License. Therefore, by modifying or propagating a covered work, you indicate your acceptance of this License to do so.

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10. Automatic Licensing of Downstream Recipients

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Each time you convey a covered work, the recipient automatically receives a license from the original licensors, to run, modify and propagate that work, subject to this License. You are not responsible for enforcing compliance by third parties with this License.

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An “entity transaction” is a transaction transferring control of an organization, or substantially all assets of one, or subdividing an organization, or merging organizations. If propagation of a covered work results from an entity transaction, each party to that transaction who receives a copy of the work also receives whatever licenses to the work the party’s predecessor in interest had or could give under the previous paragraph, plus a right to possession of the Corresponding Source of the work from the predecessor in interest, if the predecessor has it or can get it with reasonable efforts.

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You may not impose any further restrictions on the exercise of the rights granted or affirmed under this License. For example, you may not impose a license fee, royalty, or other charge for exercise of rights granted under this License, and you may not initiate litigation (including a cross-claim or counterclaim in a lawsuit) alleging that any patent claim is infringed by making, using, selling, offering for sale, or importing the Program or any portion of it.

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11. Patents

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A “contributor” is a copyright holder who authorizes use under this License of the Program or a work on which the Program is based. The work thus licensed is called the contributor’s “contributor version”.

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A contributor’s “essential patent claims” are all patent claims owned or controlled by the contributor, whether already acquired or hereafter acquired, that would be infringed by some manner, permitted by this License, of making, using, or selling its contributor version, but do not include claims that would be infringed only as a consequence of further modification of the contributor version. For purposes of this definition, “control” includes the right to grant patent sublicenses in a manner consistent with the requirements of this License.

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Each contributor grants you a non-exclusive, worldwide, royalty-free patent license under the contributor’s essential patent claims, to make, use, sell, offer for sale, import and otherwise run, modify and propagate the contents of its contributor version.

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In the following three paragraphs, a “patent license” is any express agreement or commitment, however denominated, not to enforce a patent (such as an express permission to practice a patent or covenant not to sue for patent infringement). To “grant” such a patent license to a party means to make such an agreement or commitment not to enforce a patent against the party.

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If you convey a covered work, knowingly relying on a patent license, and the Corresponding Source of the work is not available for anyone to copy, free of charge and under the terms of this License, through a publicly available network server or other readily accessible means, then you must either (1) cause the Corresponding Source to be so available, or (2) arrange to deprive yourself of the benefit of the patent license for this particular work, or (3) arrange, in a manner consistent with the requirements of this License, to extend the patent license to downstream recipients. “Knowingly relying” means you have actual knowledge that, but for the patent license, your conveying the covered work in a country, or your recipient’s use of the covered work in a country, would infringe one or more identifiable patents in that country that you have reason to believe are valid.

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If, pursuant to or in connection with a single transaction or arrangement, you convey, or propagate by procuring conveyance of, a covered work, and grant a patent license to some of the parties receiving the covered work authorizing them to use, propagate, modify or convey a specific copy of the covered work, then the patent license you grant is automatically extended to all recipients of the covered work and works based on it.

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A patent license is “discriminatory” if it does not include within the scope of its coverage, prohibits the exercise of, or is conditioned on the non-exercise of one or more of the rights that are specifically granted under this License. You may not convey a covered work if you are a party to an arrangement with a third party that is in the business of distributing software, under which you make payment to the third party based on the extent of your activity of conveying the work, and under which the third party grants, to any of the parties who would receive the covered work from you, a discriminatory patent license (a) in connection with copies of the covered work conveyed by you (or copies made from those copies), or (b) primarily for and in connection with specific products or compilations that contain the covered work, unless you entered into that arrangement, or that patent license was granted, prior to 28 March 2007.

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Nothing in this License shall be construed as excluding or limiting any implied license or other defenses to infringement that may otherwise be available to you under applicable patent law.

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12. No Surrender of Others’ Freedom

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If conditions are imposed on you (whether by court order, agreement or otherwise) that contradict the conditions of this License, they do not excuse you from the conditions of this License. If you cannot convey a covered work so as to satisfy simultaneously your obligations under this License and any other pertinent obligations, then as a consequence you may not convey it at all. For example, if you agree to terms that obligate you to collect a royalty for further conveying from those to whom you convey the Program, the only way you could satisfy both those terms and this License would be to refrain entirely from conveying the Program.

-
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13. Use with the GNU Affero General Public License

-

Notwithstanding any other provision of this License, you have permission to link or combine any covered work with a work licensed under version 3 of the GNU Affero General Public License into a single combined work, and to convey the resulting work. The terms of this License will continue to apply to the part which is the covered work, but the special requirements of the GNU Affero General Public License, section 13, concerning interaction through a network will apply to the combination as such.

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14. Revised Versions of this License

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The Free Software Foundation may publish revised and/or new versions of the GNU General Public License from time to time. Such new versions will be similar in spirit to the present version, but may differ in detail to address new problems or concerns.

-

Each version is given a distinguishing version number. If the Program specifies that a certain numbered version of the GNU General Public License “or any later version” applies to it, you have the option of following the terms and conditions either of that numbered version or of any later version published by the Free Software Foundation. If the Program does not specify a version number of the GNU General Public License, you may choose any version ever published by the Free Software Foundation.

-

If the Program specifies that a proxy can decide which future versions of the GNU General Public License can be used, that proxy’s public statement of acceptance of a version permanently authorizes you to choose that version for the Program.

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Later license versions may give you additional or different permissions. However, no additional obligations are imposed on any author or copyright holder as a result of your choosing to follow a later version.

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15. Disclaimer of Warranty

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THERE IS NO WARRANTY FOR THE PROGRAM, TO THE EXTENT PERMITTED BY APPLICABLE LAW. EXCEPT WHEN OTHERWISE STATED IN WRITING THE COPYRIGHT HOLDERS AND/OR OTHER PARTIES PROVIDE THE PROGRAM “AS IS” WITHOUT WARRANTY OF ANY KIND, EITHER EXPRESSED OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE. THE ENTIRE RISK AS TO THE QUALITY AND PERFORMANCE OF THE PROGRAM IS WITH YOU. SHOULD THE PROGRAM PROVE DEFECTIVE, YOU ASSUME THE COST OF ALL NECESSARY SERVICING, REPAIR OR CORRECTION.

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16. Limitation of Liability

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IN NO EVENT UNLESS REQUIRED BY APPLICABLE LAW OR AGREED TO IN WRITING WILL ANY COPYRIGHT HOLDER, OR ANY OTHER PARTY WHO MODIFIES AND/OR CONVEYS THE PROGRAM AS PERMITTED ABOVE, BE LIABLE TO YOU FOR DAMAGES, INCLUDING ANY GENERAL, SPECIAL, INCIDENTAL OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE USE OR INABILITY TO USE THE PROGRAM (INCLUDING BUT NOT LIMITED TO LOSS OF DATA OR DATA BEING RENDERED INACCURATE OR LOSSES SUSTAINED BY YOU OR THIRD PARTIES OR A FAILURE OF THE PROGRAM TO OPERATE WITH ANY OTHER PROGRAMS), EVEN IF SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGES.

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17. Interpretation of Sections 15 and 16

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If the disclaimer of warranty and limitation of liability provided above cannot be given local legal effect according to their terms, reviewing courts shall apply local law that most closely approximates an absolute waiver of all civil liability in connection with the Program, unless a warranty or assumption of liability accompanies a copy of the Program in return for a fee.

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END OF TERMS AND CONDITIONS

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How to Apply These Terms to Your New Programs

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If you develop a new program, and you want it to be of the greatest possible use to the public, the best way to achieve this is to make it free software which everyone can redistribute and change under these terms.

-

To do so, attach the following notices to the program. It is safest to attach them to the start of each source file to most effectively state the exclusion of warranty; and each file should have at least the “copyright” line and a pointer to where the full notice is found.

-
<one line to give the program's name and a brief idea of what it does.>
-Copyright (C) <year>  <name of author>
-
-This program is free software: you can redistribute it and/or modify
-it under the terms of the GNU General Public License as published by
-the Free Software Foundation, either version 3 of the License, or
-(at your option) any later version.
-
-This program is distributed in the hope that it will be useful,
-but WITHOUT ANY WARRANTY; without even the implied warranty of
-MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
-GNU General Public License for more details.
-
-You should have received a copy of the GNU General Public License
-along with this program.  If not, see <http://www.gnu.org/licenses/>.
-

Also add information on how to contact you by electronic and paper mail.

-

If the program does terminal interaction, make it output a short notice like this when it starts in an interactive mode:

-
<program>  Copyright (C) <year>  <name of author>
-This program comes with ABSOLUTELY NO WARRANTY; for details type 'show w'.
-This is free software, and you are welcome to redistribute it
-under certain conditions; type 'show c' for details.
-

The hypothetical commands show w and show c should show the appropriate parts of the General Public License. Of course, your program’s commands might be different; for a GUI interface, you would use an “about box”.

-

You should also get your employer (if you work as a programmer) or school, if any, to sign a “copyright disclaimer” for the program, if necessary. For more information on this, and how to apply and follow the GNU GPL, see <http://www.gnu.org/licenses/>.

-

The GNU General Public License does not permit incorporating your program into proprietary programs. If your program is a subroutine library, you may consider it more useful to permit linking proprietary applications with the library. If this is what you want to do, use the GNU Lesser General Public License instead of this License. But first, please read <http://www.gnu.org/philosophy/why-not-lgpl.html>.

-
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- - -
- - - - - - - diff --git a/dimensio/dev/apple-touch-icon-120x120.png b/dimensio/dev/apple-touch-icon-120x120.png deleted file mode 100644 index 0fbab6fa6..000000000 Binary files a/dimensio/dev/apple-touch-icon-120x120.png and /dev/null differ diff --git a/dimensio/dev/apple-touch-icon-152x152.png b/dimensio/dev/apple-touch-icon-152x152.png deleted file mode 100644 index fa7cd0666..000000000 Binary files a/dimensio/dev/apple-touch-icon-152x152.png and /dev/null differ diff --git a/dimensio/dev/apple-touch-icon-180x180.png b/dimensio/dev/apple-touch-icon-180x180.png deleted file mode 100644 index 823f0da2e..000000000 Binary files a/dimensio/dev/apple-touch-icon-180x180.png and /dev/null differ diff --git a/dimensio/dev/apple-touch-icon-60x60.png b/dimensio/dev/apple-touch-icon-60x60.png deleted file mode 100644 index f2e1884e6..000000000 Binary files a/dimensio/dev/apple-touch-icon-60x60.png and /dev/null differ diff --git a/dimensio/dev/apple-touch-icon-76x76.png b/dimensio/dev/apple-touch-icon-76x76.png deleted file mode 100644 index 0b4e72858..000000000 Binary files a/dimensio/dev/apple-touch-icon-76x76.png and /dev/null differ diff --git a/dimensio/dev/apple-touch-icon.png b/dimensio/dev/apple-touch-icon.png deleted file mode 100644 index 2a404da59..000000000 Binary files a/dimensio/dev/apple-touch-icon.png and /dev/null differ diff --git a/dimensio/dev/articles/index.html b/dimensio/dev/articles/index.html deleted file mode 100644 index 084aae97d..000000000 --- a/dimensio/dev/articles/index.html +++ /dev/null @@ -1,79 +0,0 @@ - -Articles • dimensio - Skip to contents - - -
-
-
- -
-

All vignettes

-

- -
Principal Components Analysis
-
-
-
- - -
- - - - - - - diff --git a/dimensio/dev/articles/pca.html b/dimensio/dev/articles/pca.html deleted file mode 100644 index f0d16a767..000000000 --- a/dimensio/dev/articles/pca.html +++ /dev/null @@ -1,355 +0,0 @@ - - - - - - - - -Principal Components Analysis • dimensio - - - - - - - - - - - - - - - - - - - - - - Skip to contents - - -
- - - - -
-
- - - - -
-

Do PCA -

-
-## Load data
-data(iris)
-head(iris)
-#>   Sepal.Length Sepal.Width Petal.Length Petal.Width Species
-#> 1          5.1         3.5          1.4         0.2  setosa
-#> 2          4.9         3.0          1.4         0.2  setosa
-#> 3          4.7         3.2          1.3         0.2  setosa
-#> 4          4.6         3.1          1.5         0.2  setosa
-#> 5          5.0         3.6          1.4         0.2  setosa
-#> 6          5.4         3.9          1.7         0.4  setosa
-
-## Compute PCA
-## (non numeric variables are automatically removed)
-X <- pca(iris, center = TRUE, scale = TRUE)
-#> 1 qualitative variable was removed: Species.
-
-
-

Explore the results -

-

dimensio provides several methods to extract -(get_*()) the results:

-
    -
  • -get_data() returns the original data.
  • -
  • -get_contributions() returns the contributions to the -definition of the principal dimensions.
  • -
  • -get_coordinates() returns the principal or standard -coordinates.
  • -
  • -get_correlations() returns the correlations between -variables and dimensions.
  • -
  • -get_cos2() returns the cos2 values (i.e. the -quality of the representation of the points on the factor map).
  • -
  • -get_eigenvalues() returns the eigenvalues, the -percentages of variance and the cumulative percentages of variance.
  • -
-

The package also allows to quickly visualize (viz_*()) -the results:

- -
-## Get eigenvalues
-get_eigenvalues(X)
-#>    eigenvalues  variance cumulative
-#> F1   2.9184978 73.342264   73.34226
-#> F2   0.9140305 22.969715   96.31198
-#> F3   0.1467569  3.688021  100.00000
-
-## Scree plot
-screeplot(X, cumulative = TRUE)
-
-## Plot variable contributions to the definition of the first two axes
-viz_contributions(X, margin = 2, axes = c(1, 2))
-

-
-
-

PCA biplot -

-

A biplot is the simultaneous representation of rows and columns of a -rectangular dataset. It is the generalization of a scatterplot to the -case of mutlivariate data: it allows to visualize as much information as -possible in a single graph (greenacre2010?).

-

dimensio allows to display two types of biplots: a -form biplot (row-metric-preserving biplot) or a -covariance biplot (column-metric-preserving biplot). -See (greenacre2010?) for -more details about biplots.

-

The form biplot favors the representation of the individuals: the -distance between the individuals approximates the Euclidean distance -between rows. In the form biplot the length of a vector approximates the -quality of the representation of the variable.

-
-biplot(X, type = "form", label = "variables")
-

-

The covariance biplot favors the representation of the variables: the -length of a vector approximates the standard deviation of the variable -and the cosine of the angle formed by two vectors approximates the -correlation between the two variables (greenacre2010?). In the -covariance biplot the distance between the individuals approximates the -Mahalanobis distance between rows.

-
-biplot(X, type = "covariance", label = "variables")
-

-

Biplots have the drawbacks of their advantages: they can quickly -become difficult to read as they display a lot of information at once. -It may then be preferable to visualize the results for individuals and -variables separately.

-
-
-

Plot PCA loadings -

-

viz_variables() depicts the variables by rays emanating -from the origin (both their lengths and directions are important to the -interpretation).

-
-## Plot variables factor map
-viz_variables(X)
-

-

viz_variables() allows to highlight additional -information by varying different graphical elements (color, -transparency, shape and size of symbols…).

-
-## Highlight cos2
-viz_variables(
-  x = X, 
-  highlight = "cos2", 
-  col = khroma::color("YlOrBr")(4, range = c(0.5, 1)),
-  legend = list(x = "bottomleft")
-)
-

-
-
-

Plot PCA scores -

-

viz_individuals() allows to display individuals and to -highlight additional information.

-
-## Plot individuals and color by species
-viz_individuals(
-  x = X,
-  highlight = iris$Species,
-  col = khroma::color("bright")(3), # Custom color scale
-  pch = c(15, 16, 17), # Custom symbols
-  legend = list(x = "bottomright")
-)
-

-
-## Add ellipses
-viz_individuals(x = X)
-viz_tolerance(x = X, group = iris$Species, level = 0.95,
-              border = khroma::color("high contrast")(3))
-
-## Add convex hull
-viz_individuals(x = X)
-viz_hull(x = X, group = iris$Species, level = 0.95,
-         border = khroma::color("high contrast")(3))
-

-
-## Highlight petal length
-viz_individuals(
-  x = X, 
-  highlight = iris$Petal.Length,
-  col = khroma::color("YlOrBr")(12), # Custom color scale
-  cex = c(1, 2), # Custom size scale
-  pch = 16,
-  legend = list(x = "bottomleft")
-)
-

-
-## Highlight contributions
-viz_individuals(
-  x = X, 
-  highlight = "contrib",
-  col = khroma::color("iridescent")(12), # Custom color scale
-  cex = c(1, 2), # Custom size scale
-  pch = 16,
-  legend = list(x = "bottomleft")
-)
-

-
-
-

Custom plot -

-

If you need more flexibility, the get_*() family and the -tidy() and augment() functions allow you to -extract the results as data frames and thus build custom graphs with -base graphics or ggplot2.

-
-iris_tidy <- tidy(X, margin = 2)
-head(iris_tidy)
-#>          label component supplementary coordinate contribution        cos2
-#> 1 Petal.Length        F1         FALSE 0.99155518  33.68793618 0.983181682
-#> 2 Petal.Length        F2         FALSE 0.02341519   0.05998389 0.000548271
-#> 3 Petal.Length        F3         FALSE 0.05444699   2.01999049 0.002964475
-#> 4  Petal.Width        F1         FALSE 0.96497896  31.90629060 0.931184395
-#> 5  Petal.Width        F2         FALSE 0.06399985   0.44812296 0.004095980
-#> 6  Petal.Width        F3         FALSE 0.24298265  40.23019050 0.059040571
-
-iris_augment <- augment(X, margin = 1)
-head(iris_augment)
-#>          F1         F2 label supplementary        mass      sum contribution
-#> 1 -2.264703  0.4800266     1         FALSE 0.006666667 5.359304     3.572870
-#> 2 -2.080961 -0.6741336     2         FALSE 0.006666667 4.784855     3.189904
-#> 3 -2.364229 -0.3419080     3         FALSE 0.006666667 5.706480     3.804320
-#> 4 -2.299384 -0.5973945     4         FALSE 0.006666667 5.644048     3.762699
-#> 5 -2.389842  0.6468354     5         FALSE 0.006666667 6.129742     4.086494
-#> 6 -2.075631  1.4891775     6         FALSE 0.006666667 6.525894     4.350596
-#>        cos2
-#> 1 0.9968578
-#> 2 0.9864650
-#> 3 0.9995167
-#> 4 0.9977577
-#> 5 0.9997491
-#> 6 0.9998819
-
-## Custom plot with ggplot2
-ggplot2::ggplot(data = iris_augment) +
-  ggplot2::aes(x = F1, y = F2, colour = contribution) +
-  ggplot2::geom_vline(xintercept = 0, linewidth = 0.5, linetype = "dashed") +
-  ggplot2::geom_hline(yintercept = 0, linewidth = 0.5, linetype = "dashed") +
-  ggplot2::geom_point() +
-  ggplot2::coord_fixed() + # /!\
-  ggplot2::theme_bw() +
-  khroma::scale_color_iridescent()
-
-
-

References -

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-
- - - - -
- - - - - - - diff --git a/dimensio/dev/articles/pca_files/figure-html/biplot-columns-1.png b/dimensio/dev/articles/pca_files/figure-html/biplot-columns-1.png deleted file mode 100644 index ab227662c..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/biplot-columns-1.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/biplot-rows-1.png b/dimensio/dev/articles/pca_files/figure-html/biplot-rows-1.png deleted file mode 100644 index 4a3d90b43..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/biplot-rows-1.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/eigenvalues-1.png b/dimensio/dev/articles/pca_files/figure-html/eigenvalues-1.png deleted file mode 100644 index 2ee99a3fe..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/eigenvalues-1.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/eigenvalues-2.png b/dimensio/dev/articles/pca_files/figure-html/eigenvalues-2.png deleted file mode 100644 index f7e9439b1..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/eigenvalues-2.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/plot-ind-contrib-1.png b/dimensio/dev/articles/pca_files/figure-html/plot-ind-contrib-1.png deleted file mode 100644 index ac4290a60..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/plot-ind-contrib-1.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/plot-ind-petal-1.png b/dimensio/dev/articles/pca_files/figure-html/plot-ind-petal-1.png deleted file mode 100644 index 40fb09b1f..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/plot-ind-petal-1.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/plot-ind-species-1.png b/dimensio/dev/articles/pca_files/figure-html/plot-ind-species-1.png deleted file mode 100644 index ffc44c379..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/plot-ind-species-1.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/plot-var-1.png b/dimensio/dev/articles/pca_files/figure-html/plot-var-1.png deleted file mode 100644 index 15a36e920..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/plot-var-1.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/plot-var-cos2-1.png b/dimensio/dev/articles/pca_files/figure-html/plot-var-cos2-1.png deleted file mode 100644 index 2afc8a20d..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/plot-var-cos2-1.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/plot-wrap-1.png b/dimensio/dev/articles/pca_files/figure-html/plot-wrap-1.png deleted file mode 100644 index de1d5ad5b..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/plot-wrap-1.png and /dev/null differ diff --git a/dimensio/dev/articles/pca_files/figure-html/plot-wrap-2.png b/dimensio/dev/articles/pca_files/figure-html/plot-wrap-2.png deleted file mode 100644 index fb5a4de92..000000000 Binary files a/dimensio/dev/articles/pca_files/figure-html/plot-wrap-2.png and /dev/null differ diff --git a/dimensio/dev/authors.html b/dimensio/dev/authors.html deleted file mode 100644 index a316d5cb7..000000000 --- a/dimensio/dev/authors.html +++ /dev/null @@ -1,118 +0,0 @@ - -Authors and Citation • dimensio - Skip to contents - - -
-
-
- -
-

Authors

- -
  • -

    Nicolas Frerebeau. Author, maintainer. -
    Université Bordeaux Montaigne

    -
  • -
  • -

    Jean-Baptiste Fourvel. Contributor. -
    CNRS

    -
  • -
  • -

    Brice Lebrun. Contributor. -
    Université Bordeaux Montaigne

    -
  • -
  • -

    Université Bordeaux Montaigne. Funder. -

    -
  • -
  • -

    CNRS. Funder. -

    -
  • -
- -
-

Citation

-

Source: inst/CITATION

- -

Frerebeau N (2023). -dimensio: Multivariate Data Analysis. -Université Bordeaux Montaigne, Pessac, France. -doi:10.5281/zenodo.4478530, R package version 0.4.1.9000, https://packages.tesselle.org/dimensio/. -

-
@Manual{,
-  author = {Nicolas Frerebeau},
-  title = {{dimensio: Multivariate Data Analysis}},
-  year = {2023},
-  organization = {Université Bordeaux Montaigne},
-  address = {Pessac, France},
-  note = {R package version 0.4.1.9000},
-  doi = {10.5281/zenodo.4478530},
-  url = {https://packages.tesselle.org/dimensio/},
-}
-
-
- - -
- - - - - - - diff --git a/dimensio/dev/deps/Roboto-0.4.7/font.css b/dimensio/dev/deps/Roboto-0.4.7/font.css deleted file mode 100644 index cddf76e53..000000000 --- a/dimensio/dev/deps/Roboto-0.4.7/font.css +++ /dev/null @@ -1,7 +0,0 @@ -@font-face { - font-family: 'Roboto'; - font-style: normal; - font-weight: 400; - font-display: swap; - src: url(KFOmCnqEu92Fr1Me5g.woff) format('woff'); -} diff --git a/dimensio/dev/deps/Ubuntu-0.4.7/font.css b/dimensio/dev/deps/Ubuntu-0.4.7/font.css deleted file mode 100644 index 57f888c1d..000000000 --- a/dimensio/dev/deps/Ubuntu-0.4.7/font.css +++ /dev/null @@ -1,7 +0,0 @@ -@font-face { - font-family: 'Ubuntu'; - font-style: normal; - font-weight: 400; - font-display: swap; - src: url(4iCs6KVjbNBYlgo6ew.woff) format('woff'); -} diff --git a/dimensio/dev/deps/bootstrap-5.3.1/fonts/4iCs6KVjbNBYlgo6ew.woff b/dimensio/dev/deps/bootstrap-5.3.1/fonts/4iCs6KVjbNBYlgo6ew.woff deleted file mode 100644 index 15c55d19f..000000000 Binary files a/dimensio/dev/deps/bootstrap-5.3.1/fonts/4iCs6KVjbNBYlgo6ew.woff and /dev/null differ diff --git a/dimensio/dev/deps/bootstrap-5.3.1/fonts/KFOmCnqEu92Fr1Me5g.woff b/dimensio/dev/deps/bootstrap-5.3.1/fonts/KFOmCnqEu92Fr1Me5g.woff deleted file mode 100644 index 462480009..000000000 Binary files a/dimensio/dev/deps/bootstrap-5.3.1/fonts/KFOmCnqEu92Fr1Me5g.woff and /dev/null differ diff --git a/dimensio/dev/deps/data-deps.txt b/dimensio/dev/deps/data-deps.txt deleted file mode 100644 index e30282752..000000000 --- a/dimensio/dev/deps/data-deps.txt +++ /dev/null @@ -1,6 +0,0 @@ - - - - - - diff --git a/dimensio/dev/deps/jquery-3.6.0/jquery-3.6.0.js b/dimensio/dev/deps/jquery-3.6.0/jquery-3.6.0.js deleted file mode 100644 index fc6c299b7..000000000 --- a/dimensio/dev/deps/jquery-3.6.0/jquery-3.6.0.js +++ /dev/null @@ -1,10881 +0,0 @@ -/*! - * jQuery JavaScript Library v3.6.0 - * https://jquery.com/ - * - * Includes Sizzle.js - * https://sizzlejs.com/ - * - * Copyright OpenJS Foundation and other contributors - * Released under the MIT license - * https://jquery.org/license - * - * Date: 2021-03-02T17:08Z - */ -( function( global, factory ) { - - "use strict"; - - if ( typeof module === "object" && typeof module.exports === "object" ) { - - // For CommonJS and CommonJS-like environments where a proper `window` - // is present, execute the factory and get jQuery. - // For environments that do not have a `window` with a `document` - // (such as Node.js), expose a factory as module.exports. - // This accentuates the need for the creation of a real `window`. - // e.g. var jQuery = require("jquery")(window); - // See ticket #14549 for more info. - module.exports = global.document ? - factory( global, true ) : - function( w ) { - if ( !w.document ) { - throw new Error( "jQuery requires a window with a document" ); - } - return factory( w ); - }; - } else { - factory( global ); - } - -// Pass this if window is not defined yet -} )( typeof window !== "undefined" ? window : this, function( window, noGlobal ) { - -// Edge <= 12 - 13+, Firefox <=18 - 45+, IE 10 - 11, Safari 5.1 - 9+, iOS 6 - 9.1 -// throw exceptions when non-strict code (e.g., ASP.NET 4.5) accesses strict mode -// arguments.callee.caller (trac-13335). But as of jQuery 3.0 (2016), strict mode should be common -// enough that all such attempts are guarded in a try block. -"use strict"; - -var arr = []; - -var getProto = Object.getPrototypeOf; - -var slice = arr.slice; - -var flat = arr.flat ? function( array ) { - return arr.flat.call( array ); -} : function( array ) { - return arr.concat.apply( [], array ); -}; - - -var push = arr.push; - -var indexOf = arr.indexOf; - -var class2type = {}; - -var toString = class2type.toString; - -var hasOwn = class2type.hasOwnProperty; - -var fnToString = hasOwn.toString; - -var ObjectFunctionString = fnToString.call( Object ); - -var support = {}; - -var isFunction = function isFunction( obj ) { - - // Support: Chrome <=57, Firefox <=52 - // In some browsers, typeof returns "function" for HTML elements - // (i.e., `typeof document.createElement( "object" ) === "function"`). - // We don't want to classify *any* DOM node as a function. - // Support: QtWeb <=3.8.5, WebKit <=534.34, wkhtmltopdf tool <=0.12.5 - // Plus for old WebKit, typeof returns "function" for HTML collections - // (e.g., `typeof document.getElementsByTagName("div") === "function"`). (gh-4756) - return typeof obj === "function" && typeof obj.nodeType !== "number" && - typeof obj.item !== "function"; - }; - - -var isWindow = function isWindow( obj ) { - return obj != null && obj === obj.window; - }; - - -var document = window.document; - - - - var preservedScriptAttributes = { - type: true, - src: true, - nonce: true, - noModule: true - }; - - function DOMEval( code, node, doc ) { - doc = doc || document; - - var i, val, - script = doc.createElement( "script" ); - - script.text = code; - if ( node ) { - for ( i in preservedScriptAttributes ) { - - // Support: Firefox 64+, Edge 18+ - // Some browsers don't support the "nonce" property on scripts. - // On the other hand, just using `getAttribute` is not enough as - // the `nonce` attribute is reset to an empty string whenever it - // becomes browsing-context connected. - // See https://github.com/whatwg/html/issues/2369 - // See https://html.spec.whatwg.org/#nonce-attributes - // The `node.getAttribute` check was added for the sake of - // `jQuery.globalEval` so that it can fake a nonce-containing node - // via an object. - val = node[ i ] || node.getAttribute && node.getAttribute( i ); - if ( val ) { - script.setAttribute( i, val ); - } - } - } - doc.head.appendChild( script ).parentNode.removeChild( script ); - } - - -function toType( obj ) { - if ( obj == null ) { - return obj + ""; - } - - // Support: Android <=2.3 only (functionish RegExp) - return typeof obj === "object" || typeof obj === "function" ? - class2type[ toString.call( obj ) ] || "object" : - typeof obj; -} -/* global Symbol */ -// Defining this global in .eslintrc.json would create a danger of using the global -// unguarded in another place, it seems safer to define global only for this module - - - -var - version = "3.6.0", - - // Define a local copy of jQuery - jQuery = function( selector, context ) { - - // The jQuery object is actually just the init constructor 'enhanced' - // Need init if jQuery is called (just allow error to be thrown if not included) - return new jQuery.fn.init( selector, context ); - }; - -jQuery.fn = jQuery.prototype = { - - // The current version of jQuery being used - jquery: version, - - constructor: jQuery, - - // The default length of a jQuery object is 0 - length: 0, - - toArray: function() { - return slice.call( this ); - }, - - // Get the Nth element in the matched element set OR - // Get the whole matched element set as a clean array - get: function( num ) { - - // Return all the elements in a clean array - if ( num == null ) { - return slice.call( this ); - } - - // Return just the one element from the set - return num < 0 ? this[ num + this.length ] : this[ num ]; - }, - - // Take an array of elements and push it onto the stack - // (returning the new matched element set) - pushStack: function( elems ) { - - // Build a new jQuery matched element set - var ret = jQuery.merge( this.constructor(), elems ); - - // Add the old object onto the stack (as a reference) - ret.prevObject = this; - - // Return the newly-formed element set - return ret; - }, - - // Execute a callback for every element in the matched set. - each: function( callback ) { - return jQuery.each( this, callback ); - }, - - map: function( callback ) { - return this.pushStack( jQuery.map( this, function( elem, i ) { - return callback.call( elem, i, elem ); - } ) ); - }, - - slice: function() { - return this.pushStack( slice.apply( this, arguments ) ); - }, - - first: function() { - return this.eq( 0 ); - }, - - last: function() { - return this.eq( -1 ); - }, - - even: function() { - return this.pushStack( jQuery.grep( this, function( _elem, i ) { - return ( i + 1 ) % 2; - } ) ); - }, - - odd: function() { - return this.pushStack( jQuery.grep( this, function( _elem, i ) { - return i % 2; - } ) ); - }, - - eq: function( i ) { - var len = this.length, - j = +i + ( i < 0 ? len : 0 ); - return this.pushStack( j >= 0 && j < len ? [ this[ j ] ] : [] ); - }, - - end: function() { - return this.prevObject || this.constructor(); - }, - - // For internal use only. - // Behaves like an Array's method, not like a jQuery method. - push: push, - sort: arr.sort, - splice: arr.splice -}; - -jQuery.extend = jQuery.fn.extend = function() { - var options, name, src, copy, copyIsArray, clone, - target = arguments[ 0 ] || {}, - i = 1, - length = arguments.length, - deep = false; - - // Handle a deep copy situation - if ( typeof target === "boolean" ) { - deep = target; - - // Skip the boolean and the target - target = arguments[ i ] || {}; - i++; - } - - // Handle case when target is a string or something (possible in deep copy) - if ( typeof target !== "object" && !isFunction( target ) ) { - target = {}; - } - - // Extend jQuery itself if only one argument is passed - if ( i === length ) { - target = this; - i--; - } - - for ( ; i < length; i++ ) { - - // Only deal with non-null/undefined values - if ( ( options = arguments[ i ] ) != null ) { - - // Extend the base object - for ( name in options ) { - copy = options[ name ]; - - // Prevent Object.prototype pollution - // Prevent never-ending loop - if ( name === "__proto__" || target === copy ) { - continue; - } - - // Recurse if we're merging plain objects or arrays - if ( deep && copy && ( jQuery.isPlainObject( copy ) || - ( copyIsArray = Array.isArray( copy ) ) ) ) { - src = target[ name ]; - - // Ensure proper type for the source value - if ( copyIsArray && !Array.isArray( src ) ) { - clone = []; - } else if ( !copyIsArray && !jQuery.isPlainObject( src ) ) { - clone = {}; - } else { - clone = src; - } - copyIsArray = false; - - // Never move original objects, clone them - target[ name ] = jQuery.extend( deep, clone, copy ); - - // Don't bring in undefined values - } else if ( copy !== undefined ) { - target[ name ] = copy; - } - } - } - } - - // Return the modified object - return target; -}; - -jQuery.extend( { - - // Unique for each copy of jQuery on the page - expando: "jQuery" + ( version + Math.random() ).replace( /\D/g, "" ), - - // Assume jQuery is ready without the ready module - isReady: true, - - error: function( msg ) { - throw new Error( msg ); - }, - - noop: function() {}, - - isPlainObject: function( obj ) { - var proto, Ctor; - - // Detect obvious negatives - // Use toString instead of jQuery.type to catch host objects - if ( !obj || toString.call( obj ) !== "[object Object]" ) { - return false; - } - - proto = getProto( obj ); - - // Objects with no prototype (e.g., `Object.create( null )`) are plain - if ( !proto ) { - return true; - } - - // Objects with prototype are plain iff they were constructed by a global Object function - Ctor = hasOwn.call( proto, "constructor" ) && proto.constructor; - return typeof Ctor === "function" && fnToString.call( Ctor ) === ObjectFunctionString; - }, - - isEmptyObject: function( obj ) { - var name; - - for ( name in obj ) { - return false; - } - return true; - }, - - // Evaluates a script in a provided context; falls back to the global one - // if not specified. - globalEval: function( code, options, doc ) { - DOMEval( code, { nonce: options && options.nonce }, doc ); - }, - - each: function( obj, callback ) { - var length, i = 0; - - if ( isArrayLike( obj ) ) { - length = obj.length; - for ( ; i < length; i++ ) { - if ( callback.call( obj[ i ], i, obj[ i ] ) === false ) { - break; - } - } - } else { - for ( i in obj ) { - if ( callback.call( obj[ i ], i, obj[ i ] ) === false ) { - break; - } - } - } - - return obj; - }, - - // results is for internal usage only - makeArray: function( arr, results ) { - var ret = results || []; - - if ( arr != null ) { - if ( isArrayLike( Object( arr ) ) ) { - jQuery.merge( ret, - typeof arr === "string" ? - [ arr ] : arr - ); - } else { - push.call( ret, arr ); - } - } - - return ret; - }, - - inArray: function( elem, arr, i ) { - return arr == null ? -1 : indexOf.call( arr, elem, i ); - }, - - // Support: Android <=4.0 only, PhantomJS 1 only - // push.apply(_, arraylike) throws on ancient WebKit - merge: function( first, second ) { - var len = +second.length, - j = 0, - i = first.length; - - for ( ; j < len; j++ ) { - first[ i++ ] = second[ j ]; - } - - first.length = i; - - return first; - }, - - grep: function( elems, callback, invert ) { - var callbackInverse, - matches = [], - i = 0, - length = elems.length, - callbackExpect = !invert; - - // Go through the array, only saving the items - // that pass the validator function - for ( ; i < length; i++ ) { - callbackInverse = !callback( elems[ i ], i ); - if ( callbackInverse !== callbackExpect ) { - matches.push( elems[ i ] ); - } - } - - return matches; - }, - - // arg is for internal usage only - map: function( elems, callback, arg ) { - var length, value, - i = 0, - ret = []; - - // Go through the array, translating each of the items to their new values - if ( isArrayLike( elems ) ) { - length = elems.length; - for ( ; i < length; i++ ) { - value = callback( elems[ i ], i, arg ); - - if ( value != null ) { - ret.push( value ); - } - } - - // Go through every key on the object, - } else { - for ( i in elems ) { - value = callback( elems[ i ], i, arg ); - - if ( value != null ) { - ret.push( value ); - } - } - } - - // Flatten any nested arrays - return flat( ret ); - }, - - // A global GUID counter for objects - guid: 1, - - // jQuery.support is not used in Core but other projects attach their - // properties to it so it needs to exist. - support: support -} ); - -if ( typeof Symbol === "function" ) { - jQuery.fn[ Symbol.iterator ] = arr[ Symbol.iterator ]; -} - -// Populate the class2type map -jQuery.each( "Boolean Number String Function Array Date RegExp Object Error Symbol".split( " " ), - function( _i, name ) { - class2type[ "[object " + name + "]" ] = name.toLowerCase(); - } ); - -function isArrayLike( obj ) { - - // Support: real iOS 8.2 only (not reproducible in simulator) - // `in` check used to prevent JIT error (gh-2145) - // hasOwn isn't used here due to false negatives - // regarding Nodelist length in IE - var length = !!obj && "length" in obj && obj.length, - type = toType( obj ); - - if ( isFunction( obj ) || isWindow( obj ) ) { - return false; - } - - return type === "array" || length === 0 || - typeof length === "number" && length > 0 && ( length - 1 ) in obj; -} -var Sizzle = -/*! - * Sizzle CSS Selector Engine v2.3.6 - * https://sizzlejs.com/ - * - * Copyright JS Foundation and other contributors - * Released under the MIT license - * https://js.foundation/ - * - * Date: 2021-02-16 - */ -( function( window ) { -var i, - support, - Expr, - getText, - isXML, - tokenize, - compile, - select, - outermostContext, - sortInput, - hasDuplicate, - - // Local document vars - setDocument, - document, - docElem, - documentIsHTML, - rbuggyQSA, - rbuggyMatches, - matches, - contains, - - // Instance-specific data - expando = "sizzle" + 1 * new Date(), - preferredDoc = window.document, - dirruns = 0, - done = 0, - classCache = createCache(), - tokenCache = createCache(), - compilerCache = createCache(), - nonnativeSelectorCache = createCache(), - sortOrder = function( a, b ) { - if ( a === b ) { - hasDuplicate = true; - } - return 0; - }, - - // Instance methods - hasOwn = ( {} ).hasOwnProperty, - arr = [], - pop = arr.pop, - pushNative = arr.push, - push = arr.push, - slice = arr.slice, - - // Use a stripped-down indexOf as it's faster than native - // https://jsperf.com/thor-indexof-vs-for/5 - indexOf = function( list, elem ) { - var i = 0, - len = list.length; - for ( ; i < len; i++ ) { - if ( list[ i ] === elem ) { - return i; - } - } - return -1; - }, - - booleans = "checked|selected|async|autofocus|autoplay|controls|defer|disabled|hidden|" + - "ismap|loop|multiple|open|readonly|required|scoped", - - // Regular expressions - - // http://www.w3.org/TR/css3-selectors/#whitespace - whitespace = "[\\x20\\t\\r\\n\\f]", - - // https://www.w3.org/TR/css-syntax-3/#ident-token-diagram - identifier = "(?:\\\\[\\da-fA-F]{1,6}" + whitespace + - "?|\\\\[^\\r\\n\\f]|[\\w-]|[^\0-\\x7f])+", - - // Attribute selectors: http://www.w3.org/TR/selectors/#attribute-selectors - attributes = "\\[" + whitespace + "*(" + identifier + ")(?:" + whitespace + - - // Operator (capture 2) - "*([*^$|!~]?=)" + whitespace + - - // "Attribute values must be CSS identifiers [capture 5] - // or strings [capture 3 or capture 4]" - "*(?:'((?:\\\\.|[^\\\\'])*)'|\"((?:\\\\.|[^\\\\\"])*)\"|(" + identifier + "))|)" + - whitespace + "*\\]", - - pseudos = ":(" + identifier + ")(?:\\((" + - - // To reduce the number of selectors needing tokenize in the preFilter, prefer arguments: - // 1. quoted (capture 3; capture 4 or capture 5) - "('((?:\\\\.|[^\\\\'])*)'|\"((?:\\\\.|[^\\\\\"])*)\")|" + - - // 2. simple (capture 6) - "((?:\\\\.|[^\\\\()[\\]]|" + attributes + ")*)|" + - - // 3. anything else (capture 2) - ".*" + - ")\\)|)", - - // Leading and non-escaped trailing whitespace, capturing some non-whitespace characters preceding the latter - rwhitespace = new RegExp( whitespace + "+", "g" ), - rtrim = new RegExp( "^" + whitespace + "+|((?:^|[^\\\\])(?:\\\\.)*)" + - whitespace + "+$", "g" ), - - rcomma = new RegExp( "^" + whitespace + "*," + whitespace + "*" ), - rcombinators = new RegExp( "^" + whitespace + "*([>+~]|" + whitespace + ")" + whitespace + - "*" ), - rdescend = new RegExp( whitespace + "|>" ), - - rpseudo = new RegExp( pseudos ), - ridentifier = new RegExp( "^" + identifier + "$" ), - - matchExpr = { - "ID": new RegExp( "^#(" + identifier + ")" ), - "CLASS": new RegExp( "^\\.(" + identifier + ")" ), - "TAG": new RegExp( "^(" + identifier + "|[*])" ), - "ATTR": new RegExp( "^" + attributes ), - "PSEUDO": new RegExp( "^" + pseudos ), - "CHILD": new RegExp( "^:(only|first|last|nth|nth-last)-(child|of-type)(?:\\(" + - whitespace + "*(even|odd|(([+-]|)(\\d*)n|)" + whitespace + "*(?:([+-]|)" + - whitespace + "*(\\d+)|))" + whitespace + "*\\)|)", "i" ), - "bool": new RegExp( "^(?:" + booleans + ")$", "i" ), - - // For use in libraries implementing .is() - // We use this for POS matching in `select` - "needsContext": new RegExp( "^" + whitespace + - "*[>+~]|:(even|odd|eq|gt|lt|nth|first|last)(?:\\(" + whitespace + - "*((?:-\\d)?\\d*)" + whitespace + "*\\)|)(?=[^-]|$)", "i" ) - }, - - rhtml = /HTML$/i, - rinputs = /^(?:input|select|textarea|button)$/i, - rheader = /^h\d$/i, - - rnative = /^[^{]+\{\s*\[native \w/, - - // Easily-parseable/retrievable ID or TAG or CLASS selectors - rquickExpr = /^(?:#([\w-]+)|(\w+)|\.([\w-]+))$/, - - rsibling = /[+~]/, - - // CSS escapes - // http://www.w3.org/TR/CSS21/syndata.html#escaped-characters - runescape = new RegExp( "\\\\[\\da-fA-F]{1,6}" + whitespace + "?|\\\\([^\\r\\n\\f])", "g" ), - funescape = function( escape, nonHex ) { - var high = "0x" + escape.slice( 1 ) - 0x10000; - - return nonHex ? - - // Strip the backslash prefix from a non-hex escape sequence - nonHex : - - // Replace a hexadecimal escape sequence with the encoded Unicode code point - // Support: IE <=11+ - // For values outside the Basic Multilingual Plane (BMP), manually construct a - // surrogate pair - high < 0 ? - String.fromCharCode( high + 0x10000 ) : - String.fromCharCode( high >> 10 | 0xD800, high & 0x3FF | 0xDC00 ); - }, - - // CSS string/identifier serialization - // https://drafts.csswg.org/cssom/#common-serializing-idioms - rcssescape = /([\0-\x1f\x7f]|^-?\d)|^-$|[^\0-\x1f\x7f-\uFFFF\w-]/g, - fcssescape = function( ch, asCodePoint ) { - if ( asCodePoint ) { - - // U+0000 NULL becomes U+FFFD REPLACEMENT CHARACTER - if ( ch === "\0" ) { - return "\uFFFD"; - } - - // Control characters and (dependent upon position) numbers get escaped as code points - return ch.slice( 0, -1 ) + "\\" + - ch.charCodeAt( ch.length - 1 ).toString( 16 ) + " "; - } - - // Other potentially-special ASCII characters get backslash-escaped - return "\\" + ch; - }, - - // Used for iframes - // See setDocument() - // Removing the function wrapper causes a "Permission Denied" - // error in IE - unloadHandler = function() { - setDocument(); - }, - - inDisabledFieldset = addCombinator( - function( elem ) { - return elem.disabled === true && elem.nodeName.toLowerCase() === "fieldset"; - }, - { dir: "parentNode", next: "legend" } - ); - -// Optimize for push.apply( _, NodeList ) -try { - push.apply( - ( arr = slice.call( preferredDoc.childNodes ) ), - preferredDoc.childNodes - ); - - // Support: Android<4.0 - // Detect silently failing push.apply - // eslint-disable-next-line no-unused-expressions - arr[ preferredDoc.childNodes.length ].nodeType; -} catch ( e ) { - push = { apply: arr.length ? - - // Leverage slice if possible - function( target, els ) { - pushNative.apply( target, slice.call( els ) ); - } : - - // Support: IE<9 - // Otherwise append directly - function( target, els ) { - var j = target.length, - i = 0; - - // Can't trust NodeList.length - while ( ( target[ j++ ] = els[ i++ ] ) ) {} - target.length = j - 1; - } - }; -} - -function Sizzle( selector, context, results, seed ) { - var m, i, elem, nid, match, groups, newSelector, - newContext = context && context.ownerDocument, - - // nodeType defaults to 9, since context defaults to document - nodeType = context ? context.nodeType : 9; - - results = results || []; - - // Return early from calls with invalid selector or context - if ( typeof selector !== "string" || !selector || - nodeType !== 1 && nodeType !== 9 && nodeType !== 11 ) { - - return results; - } - - // Try to shortcut find operations (as opposed to filters) in HTML documents - if ( !seed ) { - setDocument( context ); - context = context || document; - - if ( documentIsHTML ) { - - // If the selector is sufficiently simple, try using a "get*By*" DOM method - // (excepting DocumentFragment context, where the methods don't exist) - if ( nodeType !== 11 && ( match = rquickExpr.exec( selector ) ) ) { - - // ID selector - if ( ( m = match[ 1 ] ) ) { - - // Document context - if ( nodeType === 9 ) { - if ( ( elem = context.getElementById( m ) ) ) { - - // Support: IE, Opera, Webkit - // TODO: identify versions - // getElementById can match elements by name instead of ID - if ( elem.id === m ) { - results.push( elem ); - return results; - } - } else { - return results; - } - - // Element context - } else { - - // Support: IE, Opera, Webkit - // TODO: identify versions - // getElementById can match elements by name instead of ID - if ( newContext && ( elem = newContext.getElementById( m ) ) && - contains( context, elem ) && - elem.id === m ) { - - results.push( elem ); - return results; - } - } - - // Type selector - } else if ( match[ 2 ] ) { - push.apply( results, context.getElementsByTagName( selector ) ); - return results; - - // Class selector - } else if ( ( m = match[ 3 ] ) && support.getElementsByClassName && - context.getElementsByClassName ) { - - push.apply( results, context.getElementsByClassName( m ) ); - return results; - } - } - - // Take advantage of querySelectorAll - if ( support.qsa && - !nonnativeSelectorCache[ selector + " " ] && - ( !rbuggyQSA || !rbuggyQSA.test( selector ) ) && - - // Support: IE 8 only - // Exclude object elements - ( nodeType !== 1 || context.nodeName.toLowerCase() !== "object" ) ) { - - newSelector = selector; - newContext = context; - - // qSA considers elements outside a scoping root when evaluating child or - // descendant combinators, which is not what we want. - // In such cases, we work around the behavior by prefixing every selector in the - // list with an ID selector referencing the scope context. - // The technique has to be used as well when a leading combinator is used - // as such selectors are not recognized by querySelectorAll. - // Thanks to Andrew Dupont for this technique. - if ( nodeType === 1 && - ( rdescend.test( selector ) || rcombinators.test( selector ) ) ) { - - // Expand context for sibling selectors - newContext = rsibling.test( selector ) && testContext( context.parentNode ) || - context; - - // We can use :scope instead of the ID hack if the browser - // supports it & if we're not changing the context. - if ( newContext !== context || !support.scope ) { - - // Capture the context ID, setting it first if necessary - if ( ( nid = context.getAttribute( "id" ) ) ) { - nid = nid.replace( rcssescape, fcssescape ); - } else { - context.setAttribute( "id", ( nid = expando ) ); - } - } - - // Prefix every selector in the list - groups = tokenize( selector ); - i = groups.length; - while ( i-- ) { - groups[ i ] = ( nid ? "#" + nid : ":scope" ) + " " + - toSelector( groups[ i ] ); - } - newSelector = groups.join( "," ); - } - - try { - push.apply( results, - newContext.querySelectorAll( newSelector ) - ); - return results; - } catch ( qsaError ) { - nonnativeSelectorCache( selector, true ); - } finally { - if ( nid === expando ) { - context.removeAttribute( "id" ); - } - } - } - } - } - - // All others - return select( selector.replace( rtrim, "$1" ), context, results, seed ); -} - -/** - * Create key-value caches of limited size - * @returns {function(string, object)} Returns the Object data after storing it on itself with - * property name the (space-suffixed) string and (if the cache is larger than Expr.cacheLength) - * deleting the oldest entry - */ -function createCache() { - var keys = []; - - function cache( key, value ) { - - // Use (key + " ") to avoid collision with native prototype properties (see Issue #157) - if ( keys.push( key + " " ) > Expr.cacheLength ) { - - // Only keep the most recent entries - delete cache[ keys.shift() ]; - } - return ( cache[ key + " " ] = value ); - } - return cache; -} - -/** - * Mark a function for special use by Sizzle - * @param {Function} fn The function to mark - */ -function markFunction( fn ) { - fn[ expando ] = true; - return fn; -} - -/** - * Support testing using an element - * @param {Function} fn Passed the created element and returns a boolean result - */ -function assert( fn ) { - var el = document.createElement( "fieldset" ); - - try { - return !!fn( el ); - } catch ( e ) { - return false; - } finally { - - // Remove from its parent by default - if ( el.parentNode ) { - el.parentNode.removeChild( el ); - } - - // release memory in IE - el = null; - } -} - -/** - * Adds the same handler for all of the specified attrs - * @param {String} attrs Pipe-separated list of attributes - * @param {Function} handler The method that will be applied - */ -function addHandle( attrs, handler ) { - var arr = attrs.split( "|" ), - i = arr.length; - - while ( i-- ) { - Expr.attrHandle[ arr[ i ] ] = handler; - } -} - -/** - * Checks document order of two siblings - * @param {Element} a - * @param {Element} b - * @returns {Number} Returns less than 0 if a precedes b, greater than 0 if a follows b - */ -function siblingCheck( a, b ) { - var cur = b && a, - diff = cur && a.nodeType === 1 && b.nodeType === 1 && - a.sourceIndex - b.sourceIndex; - - // Use IE sourceIndex if available on both nodes - if ( diff ) { - return diff; - } - - // Check if b follows a - if ( cur ) { - while ( ( cur = cur.nextSibling ) ) { - if ( cur === b ) { - return -1; - } - } - } - - return a ? 1 : -1; -} - -/** - * Returns a function to use in pseudos for input types - * @param {String} type - */ -function createInputPseudo( type ) { - return function( elem ) { - var name = elem.nodeName.toLowerCase(); - return name === "input" && elem.type === type; - }; -} - -/** - * Returns a function to use in pseudos for buttons - * @param {String} type - */ -function createButtonPseudo( type ) { - return function( elem ) { - var name = elem.nodeName.toLowerCase(); - return ( name === "input" || name === "button" ) && elem.type === type; - }; -} - -/** - * Returns a function to use in pseudos for :enabled/:disabled - * @param {Boolean} disabled true for :disabled; false for :enabled - */ -function createDisabledPseudo( disabled ) { - - // Known :disabled false positives: fieldset[disabled] > legend:nth-of-type(n+2) :can-disable - return function( elem ) { - - // Only certain elements can match :enabled or :disabled - // https://html.spec.whatwg.org/multipage/scripting.html#selector-enabled - // https://html.spec.whatwg.org/multipage/scripting.html#selector-disabled - if ( "form" in elem ) { - - // Check for inherited disabledness on relevant non-disabled elements: - // * listed form-associated elements in a disabled fieldset - // https://html.spec.whatwg.org/multipage/forms.html#category-listed - // https://html.spec.whatwg.org/multipage/forms.html#concept-fe-disabled - // * option elements in a disabled optgroup - // https://html.spec.whatwg.org/multipage/forms.html#concept-option-disabled - // All such elements have a "form" property. - if ( elem.parentNode && elem.disabled === false ) { - - // Option elements defer to a parent optgroup if present - if ( "label" in elem ) { - if ( "label" in elem.parentNode ) { - return elem.parentNode.disabled === disabled; - } else { - return elem.disabled === disabled; - } - } - - // Support: IE 6 - 11 - // Use the isDisabled shortcut property to check for disabled fieldset ancestors - return elem.isDisabled === disabled || - - // Where there is no isDisabled, check manually - /* jshint -W018 */ - elem.isDisabled !== !disabled && - inDisabledFieldset( elem ) === disabled; - } - - return elem.disabled === disabled; - - // Try to winnow out elements that can't be disabled before trusting the disabled property. - // Some victims get caught in our net (label, legend, menu, track), but it shouldn't - // even exist on them, let alone have a boolean value. - } else if ( "label" in elem ) { - return elem.disabled === disabled; - } - - // Remaining elements are neither :enabled nor :disabled - return false; - }; -} - -/** - * Returns a function to use in pseudos for positionals - * @param {Function} fn - */ -function createPositionalPseudo( fn ) { - return markFunction( function( argument ) { - argument = +argument; - return markFunction( function( seed, matches ) { - var j, - matchIndexes = fn( [], seed.length, argument ), - i = matchIndexes.length; - - // Match elements found at the specified indexes - while ( i-- ) { - if ( seed[ ( j = matchIndexes[ i ] ) ] ) { - seed[ j ] = !( matches[ j ] = seed[ j ] ); - } - } - } ); - } ); -} - -/** - * Checks a node for validity as a Sizzle context - * @param {Element|Object=} context - * @returns {Element|Object|Boolean} The input node if acceptable, otherwise a falsy value - */ -function testContext( context ) { - return context && typeof context.getElementsByTagName !== "undefined" && context; -} - -// Expose support vars for convenience -support = Sizzle.support = {}; - -/** - * Detects XML nodes - * @param {Element|Object} elem An element or a document - * @returns {Boolean} True iff elem is a non-HTML XML node - */ -isXML = Sizzle.isXML = function( elem ) { - var namespace = elem && elem.namespaceURI, - docElem = elem && ( elem.ownerDocument || elem ).documentElement; - - // Support: IE <=8 - // Assume HTML when documentElement doesn't yet exist, such as inside loading iframes - // https://bugs.jquery.com/ticket/4833 - return !rhtml.test( namespace || docElem && docElem.nodeName || "HTML" ); -}; - -/** - * Sets document-related variables once based on the current document - * @param {Element|Object} [doc] An element or document object to use to set the document - * @returns {Object} Returns the current document - */ -setDocument = Sizzle.setDocument = function( node ) { - var hasCompare, subWindow, - doc = node ? node.ownerDocument || node : preferredDoc; - - // Return early if doc is invalid or already selected - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - // eslint-disable-next-line eqeqeq - if ( doc == document || doc.nodeType !== 9 || !doc.documentElement ) { - return document; - } - - // Update global variables - document = doc; - docElem = document.documentElement; - documentIsHTML = !isXML( document ); - - // Support: IE 9 - 11+, Edge 12 - 18+ - // Accessing iframe documents after unload throws "permission denied" errors (jQuery #13936) - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - // eslint-disable-next-line eqeqeq - if ( preferredDoc != document && - ( subWindow = document.defaultView ) && subWindow.top !== subWindow ) { - - // Support: IE 11, Edge - if ( subWindow.addEventListener ) { - subWindow.addEventListener( "unload", unloadHandler, false ); - - // Support: IE 9 - 10 only - } else if ( subWindow.attachEvent ) { - subWindow.attachEvent( "onunload", unloadHandler ); - } - } - - // Support: IE 8 - 11+, Edge 12 - 18+, Chrome <=16 - 25 only, Firefox <=3.6 - 31 only, - // Safari 4 - 5 only, Opera <=11.6 - 12.x only - // IE/Edge & older browsers don't support the :scope pseudo-class. - // Support: Safari 6.0 only - // Safari 6.0 supports :scope but it's an alias of :root there. - support.scope = assert( function( el ) { - docElem.appendChild( el ).appendChild( document.createElement( "div" ) ); - return typeof el.querySelectorAll !== "undefined" && - !el.querySelectorAll( ":scope fieldset div" ).length; - } ); - - /* Attributes - ---------------------------------------------------------------------- */ - - // Support: IE<8 - // Verify that getAttribute really returns attributes and not properties - // (excepting IE8 booleans) - support.attributes = assert( function( el ) { - el.className = "i"; - return !el.getAttribute( "className" ); - } ); - - /* getElement(s)By* - ---------------------------------------------------------------------- */ - - // Check if getElementsByTagName("*") returns only elements - support.getElementsByTagName = assert( function( el ) { - el.appendChild( document.createComment( "" ) ); - return !el.getElementsByTagName( "*" ).length; - } ); - - // Support: IE<9 - support.getElementsByClassName = rnative.test( document.getElementsByClassName ); - - // Support: IE<10 - // Check if getElementById returns elements by name - // The broken getElementById methods don't pick up programmatically-set names, - // so use a roundabout getElementsByName test - support.getById = assert( function( el ) { - docElem.appendChild( el ).id = expando; - return !document.getElementsByName || !document.getElementsByName( expando ).length; - } ); - - // ID filter and find - if ( support.getById ) { - Expr.filter[ "ID" ] = function( id ) { - var attrId = id.replace( runescape, funescape ); - return function( elem ) { - return elem.getAttribute( "id" ) === attrId; - }; - }; - Expr.find[ "ID" ] = function( id, context ) { - if ( typeof context.getElementById !== "undefined" && documentIsHTML ) { - var elem = context.getElementById( id ); - return elem ? [ elem ] : []; - } - }; - } else { - Expr.filter[ "ID" ] = function( id ) { - var attrId = id.replace( runescape, funescape ); - return function( elem ) { - var node = typeof elem.getAttributeNode !== "undefined" && - elem.getAttributeNode( "id" ); - return node && node.value === attrId; - }; - }; - - // Support: IE 6 - 7 only - // getElementById is not reliable as a find shortcut - Expr.find[ "ID" ] = function( id, context ) { - if ( typeof context.getElementById !== "undefined" && documentIsHTML ) { - var node, i, elems, - elem = context.getElementById( id ); - - if ( elem ) { - - // Verify the id attribute - node = elem.getAttributeNode( "id" ); - if ( node && node.value === id ) { - return [ elem ]; - } - - // Fall back on getElementsByName - elems = context.getElementsByName( id ); - i = 0; - while ( ( elem = elems[ i++ ] ) ) { - node = elem.getAttributeNode( "id" ); - if ( node && node.value === id ) { - return [ elem ]; - } - } - } - - return []; - } - }; - } - - // Tag - Expr.find[ "TAG" ] = support.getElementsByTagName ? - function( tag, context ) { - if ( typeof context.getElementsByTagName !== "undefined" ) { - return context.getElementsByTagName( tag ); - - // DocumentFragment nodes don't have gEBTN - } else if ( support.qsa ) { - return context.querySelectorAll( tag ); - } - } : - - function( tag, context ) { - var elem, - tmp = [], - i = 0, - - // By happy coincidence, a (broken) gEBTN appears on DocumentFragment nodes too - results = context.getElementsByTagName( tag ); - - // Filter out possible comments - if ( tag === "*" ) { - while ( ( elem = results[ i++ ] ) ) { - if ( elem.nodeType === 1 ) { - tmp.push( elem ); - } - } - - return tmp; - } - return results; - }; - - // Class - Expr.find[ "CLASS" ] = support.getElementsByClassName && function( className, context ) { - if ( typeof context.getElementsByClassName !== "undefined" && documentIsHTML ) { - return context.getElementsByClassName( className ); - } - }; - - /* QSA/matchesSelector - ---------------------------------------------------------------------- */ - - // QSA and matchesSelector support - - // matchesSelector(:active) reports false when true (IE9/Opera 11.5) - rbuggyMatches = []; - - // qSa(:focus) reports false when true (Chrome 21) - // We allow this because of a bug in IE8/9 that throws an error - // whenever `document.activeElement` is accessed on an iframe - // So, we allow :focus to pass through QSA all the time to avoid the IE error - // See https://bugs.jquery.com/ticket/13378 - rbuggyQSA = []; - - if ( ( support.qsa = rnative.test( document.querySelectorAll ) ) ) { - - // Build QSA regex - // Regex strategy adopted from Diego Perini - assert( function( el ) { - - var input; - - // Select is set to empty string on purpose - // This is to test IE's treatment of not explicitly - // setting a boolean content attribute, - // since its presence should be enough - // https://bugs.jquery.com/ticket/12359 - docElem.appendChild( el ).innerHTML = "" + - ""; - - // Support: IE8, Opera 11-12.16 - // Nothing should be selected when empty strings follow ^= or $= or *= - // The test attribute must be unknown in Opera but "safe" for WinRT - // https://msdn.microsoft.com/en-us/library/ie/hh465388.aspx#attribute_section - if ( el.querySelectorAll( "[msallowcapture^='']" ).length ) { - rbuggyQSA.push( "[*^$]=" + whitespace + "*(?:''|\"\")" ); - } - - // Support: IE8 - // Boolean attributes and "value" are not treated correctly - if ( !el.querySelectorAll( "[selected]" ).length ) { - rbuggyQSA.push( "\\[" + whitespace + "*(?:value|" + booleans + ")" ); - } - - // Support: Chrome<29, Android<4.4, Safari<7.0+, iOS<7.0+, PhantomJS<1.9.8+ - if ( !el.querySelectorAll( "[id~=" + expando + "-]" ).length ) { - rbuggyQSA.push( "~=" ); - } - - // Support: IE 11+, Edge 15 - 18+ - // IE 11/Edge don't find elements on a `[name='']` query in some cases. - // Adding a temporary attribute to the document before the selection works - // around the issue. - // Interestingly, IE 10 & older don't seem to have the issue. - input = document.createElement( "input" ); - input.setAttribute( "name", "" ); - el.appendChild( input ); - if ( !el.querySelectorAll( "[name='']" ).length ) { - rbuggyQSA.push( "\\[" + whitespace + "*name" + whitespace + "*=" + - whitespace + "*(?:''|\"\")" ); - } - - // Webkit/Opera - :checked should return selected option elements - // http://www.w3.org/TR/2011/REC-css3-selectors-20110929/#checked - // IE8 throws error here and will not see later tests - if ( !el.querySelectorAll( ":checked" ).length ) { - rbuggyQSA.push( ":checked" ); - } - - // Support: Safari 8+, iOS 8+ - // https://bugs.webkit.org/show_bug.cgi?id=136851 - // In-page `selector#id sibling-combinator selector` fails - if ( !el.querySelectorAll( "a#" + expando + "+*" ).length ) { - rbuggyQSA.push( ".#.+[+~]" ); - } - - // Support: Firefox <=3.6 - 5 only - // Old Firefox doesn't throw on a badly-escaped identifier. - el.querySelectorAll( "\\\f" ); - rbuggyQSA.push( "[\\r\\n\\f]" ); - } ); - - assert( function( el ) { - el.innerHTML = "" + - ""; - - // Support: Windows 8 Native Apps - // The type and name attributes are restricted during .innerHTML assignment - var input = document.createElement( "input" ); - input.setAttribute( "type", "hidden" ); - el.appendChild( input ).setAttribute( "name", "D" ); - - // Support: IE8 - // Enforce case-sensitivity of name attribute - if ( el.querySelectorAll( "[name=d]" ).length ) { - rbuggyQSA.push( "name" + whitespace + "*[*^$|!~]?=" ); - } - - // FF 3.5 - :enabled/:disabled and hidden elements (hidden elements are still enabled) - // IE8 throws error here and will not see later tests - if ( el.querySelectorAll( ":enabled" ).length !== 2 ) { - rbuggyQSA.push( ":enabled", ":disabled" ); - } - - // Support: IE9-11+ - // IE's :disabled selector does not pick up the children of disabled fieldsets - docElem.appendChild( el ).disabled = true; - if ( el.querySelectorAll( ":disabled" ).length !== 2 ) { - rbuggyQSA.push( ":enabled", ":disabled" ); - } - - // Support: Opera 10 - 11 only - // Opera 10-11 does not throw on post-comma invalid pseudos - el.querySelectorAll( "*,:x" ); - rbuggyQSA.push( ",.*:" ); - } ); - } - - if ( ( support.matchesSelector = rnative.test( ( matches = docElem.matches || - docElem.webkitMatchesSelector || - docElem.mozMatchesSelector || - docElem.oMatchesSelector || - docElem.msMatchesSelector ) ) ) ) { - - assert( function( el ) { - - // Check to see if it's possible to do matchesSelector - // on a disconnected node (IE 9) - support.disconnectedMatch = matches.call( el, "*" ); - - // This should fail with an exception - // Gecko does not error, returns false instead - matches.call( el, "[s!='']:x" ); - rbuggyMatches.push( "!=", pseudos ); - } ); - } - - rbuggyQSA = rbuggyQSA.length && new RegExp( rbuggyQSA.join( "|" ) ); - rbuggyMatches = rbuggyMatches.length && new RegExp( rbuggyMatches.join( "|" ) ); - - /* Contains - ---------------------------------------------------------------------- */ - hasCompare = rnative.test( docElem.compareDocumentPosition ); - - // Element contains another - // Purposefully self-exclusive - // As in, an element does not contain itself - contains = hasCompare || rnative.test( docElem.contains ) ? - function( a, b ) { - var adown = a.nodeType === 9 ? a.documentElement : a, - bup = b && b.parentNode; - return a === bup || !!( bup && bup.nodeType === 1 && ( - adown.contains ? - adown.contains( bup ) : - a.compareDocumentPosition && a.compareDocumentPosition( bup ) & 16 - ) ); - } : - function( a, b ) { - if ( b ) { - while ( ( b = b.parentNode ) ) { - if ( b === a ) { - return true; - } - } - } - return false; - }; - - /* Sorting - ---------------------------------------------------------------------- */ - - // Document order sorting - sortOrder = hasCompare ? - function( a, b ) { - - // Flag for duplicate removal - if ( a === b ) { - hasDuplicate = true; - return 0; - } - - // Sort on method existence if only one input has compareDocumentPosition - var compare = !a.compareDocumentPosition - !b.compareDocumentPosition; - if ( compare ) { - return compare; - } - - // Calculate position if both inputs belong to the same document - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - // eslint-disable-next-line eqeqeq - compare = ( a.ownerDocument || a ) == ( b.ownerDocument || b ) ? - a.compareDocumentPosition( b ) : - - // Otherwise we know they are disconnected - 1; - - // Disconnected nodes - if ( compare & 1 || - ( !support.sortDetached && b.compareDocumentPosition( a ) === compare ) ) { - - // Choose the first element that is related to our preferred document - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - // eslint-disable-next-line eqeqeq - if ( a == document || a.ownerDocument == preferredDoc && - contains( preferredDoc, a ) ) { - return -1; - } - - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - // eslint-disable-next-line eqeqeq - if ( b == document || b.ownerDocument == preferredDoc && - contains( preferredDoc, b ) ) { - return 1; - } - - // Maintain original order - return sortInput ? - ( indexOf( sortInput, a ) - indexOf( sortInput, b ) ) : - 0; - } - - return compare & 4 ? -1 : 1; - } : - function( a, b ) { - - // Exit early if the nodes are identical - if ( a === b ) { - hasDuplicate = true; - return 0; - } - - var cur, - i = 0, - aup = a.parentNode, - bup = b.parentNode, - ap = [ a ], - bp = [ b ]; - - // Parentless nodes are either documents or disconnected - if ( !aup || !bup ) { - - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - /* eslint-disable eqeqeq */ - return a == document ? -1 : - b == document ? 1 : - /* eslint-enable eqeqeq */ - aup ? -1 : - bup ? 1 : - sortInput ? - ( indexOf( sortInput, a ) - indexOf( sortInput, b ) ) : - 0; - - // If the nodes are siblings, we can do a quick check - } else if ( aup === bup ) { - return siblingCheck( a, b ); - } - - // Otherwise we need full lists of their ancestors for comparison - cur = a; - while ( ( cur = cur.parentNode ) ) { - ap.unshift( cur ); - } - cur = b; - while ( ( cur = cur.parentNode ) ) { - bp.unshift( cur ); - } - - // Walk down the tree looking for a discrepancy - while ( ap[ i ] === bp[ i ] ) { - i++; - } - - return i ? - - // Do a sibling check if the nodes have a common ancestor - siblingCheck( ap[ i ], bp[ i ] ) : - - // Otherwise nodes in our document sort first - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - /* eslint-disable eqeqeq */ - ap[ i ] == preferredDoc ? -1 : - bp[ i ] == preferredDoc ? 1 : - /* eslint-enable eqeqeq */ - 0; - }; - - return document; -}; - -Sizzle.matches = function( expr, elements ) { - return Sizzle( expr, null, null, elements ); -}; - -Sizzle.matchesSelector = function( elem, expr ) { - setDocument( elem ); - - if ( support.matchesSelector && documentIsHTML && - !nonnativeSelectorCache[ expr + " " ] && - ( !rbuggyMatches || !rbuggyMatches.test( expr ) ) && - ( !rbuggyQSA || !rbuggyQSA.test( expr ) ) ) { - - try { - var ret = matches.call( elem, expr ); - - // IE 9's matchesSelector returns false on disconnected nodes - if ( ret || support.disconnectedMatch || - - // As well, disconnected nodes are said to be in a document - // fragment in IE 9 - elem.document && elem.document.nodeType !== 11 ) { - return ret; - } - } catch ( e ) { - nonnativeSelectorCache( expr, true ); - } - } - - return Sizzle( expr, document, null, [ elem ] ).length > 0; -}; - -Sizzle.contains = function( context, elem ) { - - // Set document vars if needed - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - // eslint-disable-next-line eqeqeq - if ( ( context.ownerDocument || context ) != document ) { - setDocument( context ); - } - return contains( context, elem ); -}; - -Sizzle.attr = function( elem, name ) { - - // Set document vars if needed - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - // eslint-disable-next-line eqeqeq - if ( ( elem.ownerDocument || elem ) != document ) { - setDocument( elem ); - } - - var fn = Expr.attrHandle[ name.toLowerCase() ], - - // Don't get fooled by Object.prototype properties (jQuery #13807) - val = fn && hasOwn.call( Expr.attrHandle, name.toLowerCase() ) ? - fn( elem, name, !documentIsHTML ) : - undefined; - - return val !== undefined ? - val : - support.attributes || !documentIsHTML ? - elem.getAttribute( name ) : - ( val = elem.getAttributeNode( name ) ) && val.specified ? - val.value : - null; -}; - -Sizzle.escape = function( sel ) { - return ( sel + "" ).replace( rcssescape, fcssescape ); -}; - -Sizzle.error = function( msg ) { - throw new Error( "Syntax error, unrecognized expression: " + msg ); -}; - -/** - * Document sorting and removing duplicates - * @param {ArrayLike} results - */ -Sizzle.uniqueSort = function( results ) { - var elem, - duplicates = [], - j = 0, - i = 0; - - // Unless we *know* we can detect duplicates, assume their presence - hasDuplicate = !support.detectDuplicates; - sortInput = !support.sortStable && results.slice( 0 ); - results.sort( sortOrder ); - - if ( hasDuplicate ) { - while ( ( elem = results[ i++ ] ) ) { - if ( elem === results[ i ] ) { - j = duplicates.push( i ); - } - } - while ( j-- ) { - results.splice( duplicates[ j ], 1 ); - } - } - - // Clear input after sorting to release objects - // See https://github.com/jquery/sizzle/pull/225 - sortInput = null; - - return results; -}; - -/** - * Utility function for retrieving the text value of an array of DOM nodes - * @param {Array|Element} elem - */ -getText = Sizzle.getText = function( elem ) { - var node, - ret = "", - i = 0, - nodeType = elem.nodeType; - - if ( !nodeType ) { - - // If no nodeType, this is expected to be an array - while ( ( node = elem[ i++ ] ) ) { - - // Do not traverse comment nodes - ret += getText( node ); - } - } else if ( nodeType === 1 || nodeType === 9 || nodeType === 11 ) { - - // Use textContent for elements - // innerText usage removed for consistency of new lines (jQuery #11153) - if ( typeof elem.textContent === "string" ) { - return elem.textContent; - } else { - - // Traverse its children - for ( elem = elem.firstChild; elem; elem = elem.nextSibling ) { - ret += getText( elem ); - } - } - } else if ( nodeType === 3 || nodeType === 4 ) { - return elem.nodeValue; - } - - // Do not include comment or processing instruction nodes - - return ret; -}; - -Expr = Sizzle.selectors = { - - // Can be adjusted by the user - cacheLength: 50, - - createPseudo: markFunction, - - match: matchExpr, - - attrHandle: {}, - - find: {}, - - relative: { - ">": { dir: "parentNode", first: true }, - " ": { dir: "parentNode" }, - "+": { dir: "previousSibling", first: true }, - "~": { dir: "previousSibling" } - }, - - preFilter: { - "ATTR": function( match ) { - match[ 1 ] = match[ 1 ].replace( runescape, funescape ); - - // Move the given value to match[3] whether quoted or unquoted - match[ 3 ] = ( match[ 3 ] || match[ 4 ] || - match[ 5 ] || "" ).replace( runescape, funescape ); - - if ( match[ 2 ] === "~=" ) { - match[ 3 ] = " " + match[ 3 ] + " "; - } - - return match.slice( 0, 4 ); - }, - - "CHILD": function( match ) { - - /* matches from matchExpr["CHILD"] - 1 type (only|nth|...) - 2 what (child|of-type) - 3 argument (even|odd|\d*|\d*n([+-]\d+)?|...) - 4 xn-component of xn+y argument ([+-]?\d*n|) - 5 sign of xn-component - 6 x of xn-component - 7 sign of y-component - 8 y of y-component - */ - match[ 1 ] = match[ 1 ].toLowerCase(); - - if ( match[ 1 ].slice( 0, 3 ) === "nth" ) { - - // nth-* requires argument - if ( !match[ 3 ] ) { - Sizzle.error( match[ 0 ] ); - } - - // numeric x and y parameters for Expr.filter.CHILD - // remember that false/true cast respectively to 0/1 - match[ 4 ] = +( match[ 4 ] ? - match[ 5 ] + ( match[ 6 ] || 1 ) : - 2 * ( match[ 3 ] === "even" || match[ 3 ] === "odd" ) ); - match[ 5 ] = +( ( match[ 7 ] + match[ 8 ] ) || match[ 3 ] === "odd" ); - - // other types prohibit arguments - } else if ( match[ 3 ] ) { - Sizzle.error( match[ 0 ] ); - } - - return match; - }, - - "PSEUDO": function( match ) { - var excess, - unquoted = !match[ 6 ] && match[ 2 ]; - - if ( matchExpr[ "CHILD" ].test( match[ 0 ] ) ) { - return null; - } - - // Accept quoted arguments as-is - if ( match[ 3 ] ) { - match[ 2 ] = match[ 4 ] || match[ 5 ] || ""; - - // Strip excess characters from unquoted arguments - } else if ( unquoted && rpseudo.test( unquoted ) && - - // Get excess from tokenize (recursively) - ( excess = tokenize( unquoted, true ) ) && - - // advance to the next closing parenthesis - ( excess = unquoted.indexOf( ")", unquoted.length - excess ) - unquoted.length ) ) { - - // excess is a negative index - match[ 0 ] = match[ 0 ].slice( 0, excess ); - match[ 2 ] = unquoted.slice( 0, excess ); - } - - // Return only captures needed by the pseudo filter method (type and argument) - return match.slice( 0, 3 ); - } - }, - - filter: { - - "TAG": function( nodeNameSelector ) { - var nodeName = nodeNameSelector.replace( runescape, funescape ).toLowerCase(); - return nodeNameSelector === "*" ? - function() { - return true; - } : - function( elem ) { - return elem.nodeName && elem.nodeName.toLowerCase() === nodeName; - }; - }, - - "CLASS": function( className ) { - var pattern = classCache[ className + " " ]; - - return pattern || - ( pattern = new RegExp( "(^|" + whitespace + - ")" + className + "(" + whitespace + "|$)" ) ) && classCache( - className, function( elem ) { - return pattern.test( - typeof elem.className === "string" && elem.className || - typeof elem.getAttribute !== "undefined" && - elem.getAttribute( "class" ) || - "" - ); - } ); - }, - - "ATTR": function( name, operator, check ) { - return function( elem ) { - var result = Sizzle.attr( elem, name ); - - if ( result == null ) { - return operator === "!="; - } - if ( !operator ) { - return true; - } - - result += ""; - - /* eslint-disable max-len */ - - return operator === "=" ? result === check : - operator === "!=" ? result !== check : - operator === "^=" ? check && result.indexOf( check ) === 0 : - operator === "*=" ? check && result.indexOf( check ) > -1 : - operator === "$=" ? check && result.slice( -check.length ) === check : - operator === "~=" ? ( " " + result.replace( rwhitespace, " " ) + " " ).indexOf( check ) > -1 : - operator === "|=" ? result === check || result.slice( 0, check.length + 1 ) === check + "-" : - false; - /* eslint-enable max-len */ - - }; - }, - - "CHILD": function( type, what, _argument, first, last ) { - var simple = type.slice( 0, 3 ) !== "nth", - forward = type.slice( -4 ) !== "last", - ofType = what === "of-type"; - - return first === 1 && last === 0 ? - - // Shortcut for :nth-*(n) - function( elem ) { - return !!elem.parentNode; - } : - - function( elem, _context, xml ) { - var cache, uniqueCache, outerCache, node, nodeIndex, start, - dir = simple !== forward ? "nextSibling" : "previousSibling", - parent = elem.parentNode, - name = ofType && elem.nodeName.toLowerCase(), - useCache = !xml && !ofType, - diff = false; - - if ( parent ) { - - // :(first|last|only)-(child|of-type) - if ( simple ) { - while ( dir ) { - node = elem; - while ( ( node = node[ dir ] ) ) { - if ( ofType ? - node.nodeName.toLowerCase() === name : - node.nodeType === 1 ) { - - return false; - } - } - - // Reverse direction for :only-* (if we haven't yet done so) - start = dir = type === "only" && !start && "nextSibling"; - } - return true; - } - - start = [ forward ? parent.firstChild : parent.lastChild ]; - - // non-xml :nth-child(...) stores cache data on `parent` - if ( forward && useCache ) { - - // Seek `elem` from a previously-cached index - - // ...in a gzip-friendly way - node = parent; - outerCache = node[ expando ] || ( node[ expando ] = {} ); - - // Support: IE <9 only - // Defend against cloned attroperties (jQuery gh-1709) - uniqueCache = outerCache[ node.uniqueID ] || - ( outerCache[ node.uniqueID ] = {} ); - - cache = uniqueCache[ type ] || []; - nodeIndex = cache[ 0 ] === dirruns && cache[ 1 ]; - diff = nodeIndex && cache[ 2 ]; - node = nodeIndex && parent.childNodes[ nodeIndex ]; - - while ( ( node = ++nodeIndex && node && node[ dir ] || - - // Fallback to seeking `elem` from the start - ( diff = nodeIndex = 0 ) || start.pop() ) ) { - - // When found, cache indexes on `parent` and break - if ( node.nodeType === 1 && ++diff && node === elem ) { - uniqueCache[ type ] = [ dirruns, nodeIndex, diff ]; - break; - } - } - - } else { - - // Use previously-cached element index if available - if ( useCache ) { - - // ...in a gzip-friendly way - node = elem; - outerCache = node[ expando ] || ( node[ expando ] = {} ); - - // Support: IE <9 only - // Defend against cloned attroperties (jQuery gh-1709) - uniqueCache = outerCache[ node.uniqueID ] || - ( outerCache[ node.uniqueID ] = {} ); - - cache = uniqueCache[ type ] || []; - nodeIndex = cache[ 0 ] === dirruns && cache[ 1 ]; - diff = nodeIndex; - } - - // xml :nth-child(...) - // or :nth-last-child(...) or :nth(-last)?-of-type(...) - if ( diff === false ) { - - // Use the same loop as above to seek `elem` from the start - while ( ( node = ++nodeIndex && node && node[ dir ] || - ( diff = nodeIndex = 0 ) || start.pop() ) ) { - - if ( ( ofType ? - node.nodeName.toLowerCase() === name : - node.nodeType === 1 ) && - ++diff ) { - - // Cache the index of each encountered element - if ( useCache ) { - outerCache = node[ expando ] || - ( node[ expando ] = {} ); - - // Support: IE <9 only - // Defend against cloned attroperties (jQuery gh-1709) - uniqueCache = outerCache[ node.uniqueID ] || - ( outerCache[ node.uniqueID ] = {} ); - - uniqueCache[ type ] = [ dirruns, diff ]; - } - - if ( node === elem ) { - break; - } - } - } - } - } - - // Incorporate the offset, then check against cycle size - diff -= last; - return diff === first || ( diff % first === 0 && diff / first >= 0 ); - } - }; - }, - - "PSEUDO": function( pseudo, argument ) { - - // pseudo-class names are case-insensitive - // http://www.w3.org/TR/selectors/#pseudo-classes - // Prioritize by case sensitivity in case custom pseudos are added with uppercase letters - // Remember that setFilters inherits from pseudos - var args, - fn = Expr.pseudos[ pseudo ] || Expr.setFilters[ pseudo.toLowerCase() ] || - Sizzle.error( "unsupported pseudo: " + pseudo ); - - // The user may use createPseudo to indicate that - // arguments are needed to create the filter function - // just as Sizzle does - if ( fn[ expando ] ) { - return fn( argument ); - } - - // But maintain support for old signatures - if ( fn.length > 1 ) { - args = [ pseudo, pseudo, "", argument ]; - return Expr.setFilters.hasOwnProperty( pseudo.toLowerCase() ) ? - markFunction( function( seed, matches ) { - var idx, - matched = fn( seed, argument ), - i = matched.length; - while ( i-- ) { - idx = indexOf( seed, matched[ i ] ); - seed[ idx ] = !( matches[ idx ] = matched[ i ] ); - } - } ) : - function( elem ) { - return fn( elem, 0, args ); - }; - } - - return fn; - } - }, - - pseudos: { - - // Potentially complex pseudos - "not": markFunction( function( selector ) { - - // Trim the selector passed to compile - // to avoid treating leading and trailing - // spaces as combinators - var input = [], - results = [], - matcher = compile( selector.replace( rtrim, "$1" ) ); - - return matcher[ expando ] ? - markFunction( function( seed, matches, _context, xml ) { - var elem, - unmatched = matcher( seed, null, xml, [] ), - i = seed.length; - - // Match elements unmatched by `matcher` - while ( i-- ) { - if ( ( elem = unmatched[ i ] ) ) { - seed[ i ] = !( matches[ i ] = elem ); - } - } - } ) : - function( elem, _context, xml ) { - input[ 0 ] = elem; - matcher( input, null, xml, results ); - - // Don't keep the element (issue #299) - input[ 0 ] = null; - return !results.pop(); - }; - } ), - - "has": markFunction( function( selector ) { - return function( elem ) { - return Sizzle( selector, elem ).length > 0; - }; - } ), - - "contains": markFunction( function( text ) { - text = text.replace( runescape, funescape ); - return function( elem ) { - return ( elem.textContent || getText( elem ) ).indexOf( text ) > -1; - }; - } ), - - // "Whether an element is represented by a :lang() selector - // is based solely on the element's language value - // being equal to the identifier C, - // or beginning with the identifier C immediately followed by "-". - // The matching of C against the element's language value is performed case-insensitively. - // The identifier C does not have to be a valid language name." - // http://www.w3.org/TR/selectors/#lang-pseudo - "lang": markFunction( function( lang ) { - - // lang value must be a valid identifier - if ( !ridentifier.test( lang || "" ) ) { - Sizzle.error( "unsupported lang: " + lang ); - } - lang = lang.replace( runescape, funescape ).toLowerCase(); - return function( elem ) { - var elemLang; - do { - if ( ( elemLang = documentIsHTML ? - elem.lang : - elem.getAttribute( "xml:lang" ) || elem.getAttribute( "lang" ) ) ) { - - elemLang = elemLang.toLowerCase(); - return elemLang === lang || elemLang.indexOf( lang + "-" ) === 0; - } - } while ( ( elem = elem.parentNode ) && elem.nodeType === 1 ); - return false; - }; - } ), - - // Miscellaneous - "target": function( elem ) { - var hash = window.location && window.location.hash; - return hash && hash.slice( 1 ) === elem.id; - }, - - "root": function( elem ) { - return elem === docElem; - }, - - "focus": function( elem ) { - return elem === document.activeElement && - ( !document.hasFocus || document.hasFocus() ) && - !!( elem.type || elem.href || ~elem.tabIndex ); - }, - - // Boolean properties - "enabled": createDisabledPseudo( false ), - "disabled": createDisabledPseudo( true ), - - "checked": function( elem ) { - - // In CSS3, :checked should return both checked and selected elements - // http://www.w3.org/TR/2011/REC-css3-selectors-20110929/#checked - var nodeName = elem.nodeName.toLowerCase(); - return ( nodeName === "input" && !!elem.checked ) || - ( nodeName === "option" && !!elem.selected ); - }, - - "selected": function( elem ) { - - // Accessing this property makes selected-by-default - // options in Safari work properly - if ( elem.parentNode ) { - // eslint-disable-next-line no-unused-expressions - elem.parentNode.selectedIndex; - } - - return elem.selected === true; - }, - - // Contents - "empty": function( elem ) { - - // http://www.w3.org/TR/selectors/#empty-pseudo - // :empty is negated by element (1) or content nodes (text: 3; cdata: 4; entity ref: 5), - // but not by others (comment: 8; processing instruction: 7; etc.) - // nodeType < 6 works because attributes (2) do not appear as children - for ( elem = elem.firstChild; elem; elem = elem.nextSibling ) { - if ( elem.nodeType < 6 ) { - return false; - } - } - return true; - }, - - "parent": function( elem ) { - return !Expr.pseudos[ "empty" ]( elem ); - }, - - // Element/input types - "header": function( elem ) { - return rheader.test( elem.nodeName ); - }, - - "input": function( elem ) { - return rinputs.test( elem.nodeName ); - }, - - "button": function( elem ) { - var name = elem.nodeName.toLowerCase(); - return name === "input" && elem.type === "button" || name === "button"; - }, - - "text": function( elem ) { - var attr; - return elem.nodeName.toLowerCase() === "input" && - elem.type === "text" && - - // Support: IE<8 - // New HTML5 attribute values (e.g., "search") appear with elem.type === "text" - ( ( attr = elem.getAttribute( "type" ) ) == null || - attr.toLowerCase() === "text" ); - }, - - // Position-in-collection - "first": createPositionalPseudo( function() { - return [ 0 ]; - } ), - - "last": createPositionalPseudo( function( _matchIndexes, length ) { - return [ length - 1 ]; - } ), - - "eq": createPositionalPseudo( function( _matchIndexes, length, argument ) { - return [ argument < 0 ? argument + length : argument ]; - } ), - - "even": createPositionalPseudo( function( matchIndexes, length ) { - var i = 0; - for ( ; i < length; i += 2 ) { - matchIndexes.push( i ); - } - return matchIndexes; - } ), - - "odd": createPositionalPseudo( function( matchIndexes, length ) { - var i = 1; - for ( ; i < length; i += 2 ) { - matchIndexes.push( i ); - } - return matchIndexes; - } ), - - "lt": createPositionalPseudo( function( matchIndexes, length, argument ) { - var i = argument < 0 ? - argument + length : - argument > length ? - length : - argument; - for ( ; --i >= 0; ) { - matchIndexes.push( i ); - } - return matchIndexes; - } ), - - "gt": createPositionalPseudo( function( matchIndexes, length, argument ) { - var i = argument < 0 ? argument + length : argument; - for ( ; ++i < length; ) { - matchIndexes.push( i ); - } - return matchIndexes; - } ) - } -}; - -Expr.pseudos[ "nth" ] = Expr.pseudos[ "eq" ]; - -// Add button/input type pseudos -for ( i in { radio: true, checkbox: true, file: true, password: true, image: true } ) { - Expr.pseudos[ i ] = createInputPseudo( i ); -} -for ( i in { submit: true, reset: true } ) { - Expr.pseudos[ i ] = createButtonPseudo( i ); -} - -// Easy API for creating new setFilters -function setFilters() {} -setFilters.prototype = Expr.filters = Expr.pseudos; -Expr.setFilters = new setFilters(); - -tokenize = Sizzle.tokenize = function( selector, parseOnly ) { - var matched, match, tokens, type, - soFar, groups, preFilters, - cached = tokenCache[ selector + " " ]; - - if ( cached ) { - return parseOnly ? 0 : cached.slice( 0 ); - } - - soFar = selector; - groups = []; - preFilters = Expr.preFilter; - - while ( soFar ) { - - // Comma and first run - if ( !matched || ( match = rcomma.exec( soFar ) ) ) { - if ( match ) { - - // Don't consume trailing commas as valid - soFar = soFar.slice( match[ 0 ].length ) || soFar; - } - groups.push( ( tokens = [] ) ); - } - - matched = false; - - // Combinators - if ( ( match = rcombinators.exec( soFar ) ) ) { - matched = match.shift(); - tokens.push( { - value: matched, - - // Cast descendant combinators to space - type: match[ 0 ].replace( rtrim, " " ) - } ); - soFar = soFar.slice( matched.length ); - } - - // Filters - for ( type in Expr.filter ) { - if ( ( match = matchExpr[ type ].exec( soFar ) ) && ( !preFilters[ type ] || - ( match = preFilters[ type ]( match ) ) ) ) { - matched = match.shift(); - tokens.push( { - value: matched, - type: type, - matches: match - } ); - soFar = soFar.slice( matched.length ); - } - } - - if ( !matched ) { - break; - } - } - - // Return the length of the invalid excess - // if we're just parsing - // Otherwise, throw an error or return tokens - return parseOnly ? - soFar.length : - soFar ? - Sizzle.error( selector ) : - - // Cache the tokens - tokenCache( selector, groups ).slice( 0 ); -}; - -function toSelector( tokens ) { - var i = 0, - len = tokens.length, - selector = ""; - for ( ; i < len; i++ ) { - selector += tokens[ i ].value; - } - return selector; -} - -function addCombinator( matcher, combinator, base ) { - var dir = combinator.dir, - skip = combinator.next, - key = skip || dir, - checkNonElements = base && key === "parentNode", - doneName = done++; - - return combinator.first ? - - // Check against closest ancestor/preceding element - function( elem, context, xml ) { - while ( ( elem = elem[ dir ] ) ) { - if ( elem.nodeType === 1 || checkNonElements ) { - return matcher( elem, context, xml ); - } - } - return false; - } : - - // Check against all ancestor/preceding elements - function( elem, context, xml ) { - var oldCache, uniqueCache, outerCache, - newCache = [ dirruns, doneName ]; - - // We can't set arbitrary data on XML nodes, so they don't benefit from combinator caching - if ( xml ) { - while ( ( elem = elem[ dir ] ) ) { - if ( elem.nodeType === 1 || checkNonElements ) { - if ( matcher( elem, context, xml ) ) { - return true; - } - } - } - } else { - while ( ( elem = elem[ dir ] ) ) { - if ( elem.nodeType === 1 || checkNonElements ) { - outerCache = elem[ expando ] || ( elem[ expando ] = {} ); - - // Support: IE <9 only - // Defend against cloned attroperties (jQuery gh-1709) - uniqueCache = outerCache[ elem.uniqueID ] || - ( outerCache[ elem.uniqueID ] = {} ); - - if ( skip && skip === elem.nodeName.toLowerCase() ) { - elem = elem[ dir ] || elem; - } else if ( ( oldCache = uniqueCache[ key ] ) && - oldCache[ 0 ] === dirruns && oldCache[ 1 ] === doneName ) { - - // Assign to newCache so results back-propagate to previous elements - return ( newCache[ 2 ] = oldCache[ 2 ] ); - } else { - - // Reuse newcache so results back-propagate to previous elements - uniqueCache[ key ] = newCache; - - // A match means we're done; a fail means we have to keep checking - if ( ( newCache[ 2 ] = matcher( elem, context, xml ) ) ) { - return true; - } - } - } - } - } - return false; - }; -} - -function elementMatcher( matchers ) { - return matchers.length > 1 ? - function( elem, context, xml ) { - var i = matchers.length; - while ( i-- ) { - if ( !matchers[ i ]( elem, context, xml ) ) { - return false; - } - } - return true; - } : - matchers[ 0 ]; -} - -function multipleContexts( selector, contexts, results ) { - var i = 0, - len = contexts.length; - for ( ; i < len; i++ ) { - Sizzle( selector, contexts[ i ], results ); - } - return results; -} - -function condense( unmatched, map, filter, context, xml ) { - var elem, - newUnmatched = [], - i = 0, - len = unmatched.length, - mapped = map != null; - - for ( ; i < len; i++ ) { - if ( ( elem = unmatched[ i ] ) ) { - if ( !filter || filter( elem, context, xml ) ) { - newUnmatched.push( elem ); - if ( mapped ) { - map.push( i ); - } - } - } - } - - return newUnmatched; -} - -function setMatcher( preFilter, selector, matcher, postFilter, postFinder, postSelector ) { - if ( postFilter && !postFilter[ expando ] ) { - postFilter = setMatcher( postFilter ); - } - if ( postFinder && !postFinder[ expando ] ) { - postFinder = setMatcher( postFinder, postSelector ); - } - return markFunction( function( seed, results, context, xml ) { - var temp, i, elem, - preMap = [], - postMap = [], - preexisting = results.length, - - // Get initial elements from seed or context - elems = seed || multipleContexts( - selector || "*", - context.nodeType ? [ context ] : context, - [] - ), - - // Prefilter to get matcher input, preserving a map for seed-results synchronization - matcherIn = preFilter && ( seed || !selector ) ? - condense( elems, preMap, preFilter, context, xml ) : - elems, - - matcherOut = matcher ? - - // If we have a postFinder, or filtered seed, or non-seed postFilter or preexisting results, - postFinder || ( seed ? preFilter : preexisting || postFilter ) ? - - // ...intermediate processing is necessary - [] : - - // ...otherwise use results directly - results : - matcherIn; - - // Find primary matches - if ( matcher ) { - matcher( matcherIn, matcherOut, context, xml ); - } - - // Apply postFilter - if ( postFilter ) { - temp = condense( matcherOut, postMap ); - postFilter( temp, [], context, xml ); - - // Un-match failing elements by moving them back to matcherIn - i = temp.length; - while ( i-- ) { - if ( ( elem = temp[ i ] ) ) { - matcherOut[ postMap[ i ] ] = !( matcherIn[ postMap[ i ] ] = elem ); - } - } - } - - if ( seed ) { - if ( postFinder || preFilter ) { - if ( postFinder ) { - - // Get the final matcherOut by condensing this intermediate into postFinder contexts - temp = []; - i = matcherOut.length; - while ( i-- ) { - if ( ( elem = matcherOut[ i ] ) ) { - - // Restore matcherIn since elem is not yet a final match - temp.push( ( matcherIn[ i ] = elem ) ); - } - } - postFinder( null, ( matcherOut = [] ), temp, xml ); - } - - // Move matched elements from seed to results to keep them synchronized - i = matcherOut.length; - while ( i-- ) { - if ( ( elem = matcherOut[ i ] ) && - ( temp = postFinder ? indexOf( seed, elem ) : preMap[ i ] ) > -1 ) { - - seed[ temp ] = !( results[ temp ] = elem ); - } - } - } - - // Add elements to results, through postFinder if defined - } else { - matcherOut = condense( - matcherOut === results ? - matcherOut.splice( preexisting, matcherOut.length ) : - matcherOut - ); - if ( postFinder ) { - postFinder( null, results, matcherOut, xml ); - } else { - push.apply( results, matcherOut ); - } - } - } ); -} - -function matcherFromTokens( tokens ) { - var checkContext, matcher, j, - len = tokens.length, - leadingRelative = Expr.relative[ tokens[ 0 ].type ], - implicitRelative = leadingRelative || Expr.relative[ " " ], - i = leadingRelative ? 1 : 0, - - // The foundational matcher ensures that elements are reachable from top-level context(s) - matchContext = addCombinator( function( elem ) { - return elem === checkContext; - }, implicitRelative, true ), - matchAnyContext = addCombinator( function( elem ) { - return indexOf( checkContext, elem ) > -1; - }, implicitRelative, true ), - matchers = [ function( elem, context, xml ) { - var ret = ( !leadingRelative && ( xml || context !== outermostContext ) ) || ( - ( checkContext = context ).nodeType ? - matchContext( elem, context, xml ) : - matchAnyContext( elem, context, xml ) ); - - // Avoid hanging onto element (issue #299) - checkContext = null; - return ret; - } ]; - - for ( ; i < len; i++ ) { - if ( ( matcher = Expr.relative[ tokens[ i ].type ] ) ) { - matchers = [ addCombinator( elementMatcher( matchers ), matcher ) ]; - } else { - matcher = Expr.filter[ tokens[ i ].type ].apply( null, tokens[ i ].matches ); - - // Return special upon seeing a positional matcher - if ( matcher[ expando ] ) { - - // Find the next relative operator (if any) for proper handling - j = ++i; - for ( ; j < len; j++ ) { - if ( Expr.relative[ tokens[ j ].type ] ) { - break; - } - } - return setMatcher( - i > 1 && elementMatcher( matchers ), - i > 1 && toSelector( - - // If the preceding token was a descendant combinator, insert an implicit any-element `*` - tokens - .slice( 0, i - 1 ) - .concat( { value: tokens[ i - 2 ].type === " " ? "*" : "" } ) - ).replace( rtrim, "$1" ), - matcher, - i < j && matcherFromTokens( tokens.slice( i, j ) ), - j < len && matcherFromTokens( ( tokens = tokens.slice( j ) ) ), - j < len && toSelector( tokens ) - ); - } - matchers.push( matcher ); - } - } - - return elementMatcher( matchers ); -} - -function matcherFromGroupMatchers( elementMatchers, setMatchers ) { - var bySet = setMatchers.length > 0, - byElement = elementMatchers.length > 0, - superMatcher = function( seed, context, xml, results, outermost ) { - var elem, j, matcher, - matchedCount = 0, - i = "0", - unmatched = seed && [], - setMatched = [], - contextBackup = outermostContext, - - // We must always have either seed elements or outermost context - elems = seed || byElement && Expr.find[ "TAG" ]( "*", outermost ), - - // Use integer dirruns iff this is the outermost matcher - dirrunsUnique = ( dirruns += contextBackup == null ? 1 : Math.random() || 0.1 ), - len = elems.length; - - if ( outermost ) { - - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - // eslint-disable-next-line eqeqeq - outermostContext = context == document || context || outermost; - } - - // Add elements passing elementMatchers directly to results - // Support: IE<9, Safari - // Tolerate NodeList properties (IE: "length"; Safari: ) matching elements by id - for ( ; i !== len && ( elem = elems[ i ] ) != null; i++ ) { - if ( byElement && elem ) { - j = 0; - - // Support: IE 11+, Edge 17 - 18+ - // IE/Edge sometimes throw a "Permission denied" error when strict-comparing - // two documents; shallow comparisons work. - // eslint-disable-next-line eqeqeq - if ( !context && elem.ownerDocument != document ) { - setDocument( elem ); - xml = !documentIsHTML; - } - while ( ( matcher = elementMatchers[ j++ ] ) ) { - if ( matcher( elem, context || document, xml ) ) { - results.push( elem ); - break; - } - } - if ( outermost ) { - dirruns = dirrunsUnique; - } - } - - // Track unmatched elements for set filters - if ( bySet ) { - - // They will have gone through all possible matchers - if ( ( elem = !matcher && elem ) ) { - matchedCount--; - } - - // Lengthen the array for every element, matched or not - if ( seed ) { - unmatched.push( elem ); - } - } - } - - // `i` is now the count of elements visited above, and adding it to `matchedCount` - // makes the latter nonnegative. - matchedCount += i; - - // Apply set filters to unmatched elements - // NOTE: This can be skipped if there are no unmatched elements (i.e., `matchedCount` - // equals `i`), unless we didn't visit _any_ elements in the above loop because we have - // no element matchers and no seed. - // Incrementing an initially-string "0" `i` allows `i` to remain a string only in that - // case, which will result in a "00" `matchedCount` that differs from `i` but is also - // numerically zero. - if ( bySet && i !== matchedCount ) { - j = 0; - while ( ( matcher = setMatchers[ j++ ] ) ) { - matcher( unmatched, setMatched, context, xml ); - } - - if ( seed ) { - - // Reintegrate element matches to eliminate the need for sorting - if ( matchedCount > 0 ) { - while ( i-- ) { - if ( !( unmatched[ i ] || setMatched[ i ] ) ) { - setMatched[ i ] = pop.call( results ); - } - } - } - - // Discard index placeholder values to get only actual matches - setMatched = condense( setMatched ); - } - - // Add matches to results - push.apply( results, setMatched ); - - // Seedless set matches succeeding multiple successful matchers stipulate sorting - if ( outermost && !seed && setMatched.length > 0 && - ( matchedCount + setMatchers.length ) > 1 ) { - - Sizzle.uniqueSort( results ); - } - } - - // Override manipulation of globals by nested matchers - if ( outermost ) { - dirruns = dirrunsUnique; - outermostContext = contextBackup; - } - - return unmatched; - }; - - return bySet ? - markFunction( superMatcher ) : - superMatcher; -} - -compile = Sizzle.compile = function( selector, match /* Internal Use Only */ ) { - var i, - setMatchers = [], - elementMatchers = [], - cached = compilerCache[ selector + " " ]; - - if ( !cached ) { - - // Generate a function of recursive functions that can be used to check each element - if ( !match ) { - match = tokenize( selector ); - } - i = match.length; - while ( i-- ) { - cached = matcherFromTokens( match[ i ] ); - if ( cached[ expando ] ) { - setMatchers.push( cached ); - } else { - elementMatchers.push( cached ); - } - } - - // Cache the compiled function - cached = compilerCache( - selector, - matcherFromGroupMatchers( elementMatchers, setMatchers ) - ); - - // Save selector and tokenization - cached.selector = selector; - } - return cached; -}; - -/** - * A low-level selection function that works with Sizzle's compiled - * selector functions - * @param {String|Function} selector A selector or a pre-compiled - * selector function built with Sizzle.compile - * @param {Element} context - * @param {Array} [results] - * @param {Array} [seed] A set of elements to match against - */ -select = Sizzle.select = function( selector, context, results, seed ) { - var i, tokens, token, type, find, - compiled = typeof selector === "function" && selector, - match = !seed && tokenize( ( selector = compiled.selector || selector ) ); - - results = results || []; - - // Try to minimize operations if there is only one selector in the list and no seed - // (the latter of which guarantees us context) - if ( match.length === 1 ) { - - // Reduce context if the leading compound selector is an ID - tokens = match[ 0 ] = match[ 0 ].slice( 0 ); - if ( tokens.length > 2 && ( token = tokens[ 0 ] ).type === "ID" && - context.nodeType === 9 && documentIsHTML && Expr.relative[ tokens[ 1 ].type ] ) { - - context = ( Expr.find[ "ID" ]( token.matches[ 0 ] - .replace( runescape, funescape ), context ) || [] )[ 0 ]; - if ( !context ) { - return results; - - // Precompiled matchers will still verify ancestry, so step up a level - } else if ( compiled ) { - context = context.parentNode; - } - - selector = selector.slice( tokens.shift().value.length ); - } - - // Fetch a seed set for right-to-left matching - i = matchExpr[ "needsContext" ].test( selector ) ? 0 : tokens.length; - while ( i-- ) { - token = tokens[ i ]; - - // Abort if we hit a combinator - if ( Expr.relative[ ( type = token.type ) ] ) { - break; - } - if ( ( find = Expr.find[ type ] ) ) { - - // Search, expanding context for leading sibling combinators - if ( ( seed = find( - token.matches[ 0 ].replace( runescape, funescape ), - rsibling.test( tokens[ 0 ].type ) && testContext( context.parentNode ) || - context - ) ) ) { - - // If seed is empty or no tokens remain, we can return early - tokens.splice( i, 1 ); - selector = seed.length && toSelector( tokens ); - if ( !selector ) { - push.apply( results, seed ); - return results; - } - - break; - } - } - } - } - - // Compile and execute a filtering function if one is not provided - // Provide `match` to avoid retokenization if we modified the selector above - ( compiled || compile( selector, match ) )( - seed, - context, - !documentIsHTML, - results, - !context || rsibling.test( selector ) && testContext( context.parentNode ) || context - ); - return results; -}; - -// One-time assignments - -// Sort stability -support.sortStable = expando.split( "" ).sort( sortOrder ).join( "" ) === expando; - -// Support: Chrome 14-35+ -// Always assume duplicates if they aren't passed to the comparison function -support.detectDuplicates = !!hasDuplicate; - -// Initialize against the default document -setDocument(); - -// Support: Webkit<537.32 - Safari 6.0.3/Chrome 25 (fixed in Chrome 27) -// Detached nodes confoundingly follow *each other* -support.sortDetached = assert( function( el ) { - - // Should return 1, but returns 4 (following) - return el.compareDocumentPosition( document.createElement( "fieldset" ) ) & 1; -} ); - -// Support: IE<8 -// Prevent attribute/property "interpolation" -// https://msdn.microsoft.com/en-us/library/ms536429%28VS.85%29.aspx -if ( !assert( function( el ) { - el.innerHTML = ""; - return el.firstChild.getAttribute( "href" ) === "#"; -} ) ) { - addHandle( "type|href|height|width", function( elem, name, isXML ) { - if ( !isXML ) { - return elem.getAttribute( name, name.toLowerCase() === "type" ? 1 : 2 ); - } - } ); -} - -// Support: IE<9 -// Use defaultValue in place of getAttribute("value") -if ( !support.attributes || !assert( function( el ) { - el.innerHTML = ""; - el.firstChild.setAttribute( "value", "" ); - return el.firstChild.getAttribute( "value" ) === ""; -} ) ) { - addHandle( "value", function( elem, _name, isXML ) { - if ( !isXML && elem.nodeName.toLowerCase() === "input" ) { - return elem.defaultValue; - } - } ); -} - -// Support: IE<9 -// Use getAttributeNode to fetch booleans when getAttribute lies -if ( !assert( function( el ) { - return el.getAttribute( "disabled" ) == null; -} ) ) { - addHandle( booleans, function( elem, name, isXML ) { - var val; - if ( !isXML ) { - return elem[ name ] === true ? name.toLowerCase() : - ( val = elem.getAttributeNode( name ) ) && val.specified ? - val.value : - null; - } - } ); -} - -return Sizzle; - -} )( window ); - - - -jQuery.find = Sizzle; -jQuery.expr = Sizzle.selectors; - -// Deprecated -jQuery.expr[ ":" ] = jQuery.expr.pseudos; -jQuery.uniqueSort = jQuery.unique = Sizzle.uniqueSort; -jQuery.text = Sizzle.getText; -jQuery.isXMLDoc = Sizzle.isXML; -jQuery.contains = Sizzle.contains; -jQuery.escapeSelector = Sizzle.escape; - - - - -var dir = function( elem, dir, until ) { - var matched = [], - truncate = until !== undefined; - - while ( ( elem = elem[ dir ] ) && elem.nodeType !== 9 ) { - if ( elem.nodeType === 1 ) { - if ( truncate && jQuery( elem ).is( until ) ) { - break; - } - matched.push( elem ); - } - } - return matched; -}; - - -var siblings = function( n, elem ) { - var matched = []; - - for ( ; n; n = n.nextSibling ) { - if ( n.nodeType === 1 && n !== elem ) { - matched.push( n ); - } - } - - return matched; -}; - - -var rneedsContext = jQuery.expr.match.needsContext; - - - -function nodeName( elem, name ) { - - return elem.nodeName && elem.nodeName.toLowerCase() === name.toLowerCase(); - -} -var rsingleTag = ( /^<([a-z][^\/\0>:\x20\t\r\n\f]*)[\x20\t\r\n\f]*\/?>(?:<\/\1>|)$/i ); - - - -// Implement the identical functionality for filter and not -function winnow( elements, qualifier, not ) { - if ( isFunction( qualifier ) ) { - return jQuery.grep( elements, function( elem, i ) { - return !!qualifier.call( elem, i, elem ) !== not; - } ); - } - - // Single element - if ( qualifier.nodeType ) { - return jQuery.grep( elements, function( elem ) { - return ( elem === qualifier ) !== not; - } ); - } - - // Arraylike of elements (jQuery, arguments, Array) - if ( typeof qualifier !== "string" ) { - return jQuery.grep( elements, function( elem ) { - return ( indexOf.call( qualifier, elem ) > -1 ) !== not; - } ); - } - - // Filtered directly for both simple and complex selectors - return jQuery.filter( qualifier, elements, not ); -} - -jQuery.filter = function( expr, elems, not ) { - var elem = elems[ 0 ]; - - if ( not ) { - expr = ":not(" + expr + ")"; - } - - if ( elems.length === 1 && elem.nodeType === 1 ) { - return jQuery.find.matchesSelector( elem, expr ) ? [ elem ] : []; - } - - return jQuery.find.matches( expr, jQuery.grep( elems, function( elem ) { - return elem.nodeType === 1; - } ) ); -}; - -jQuery.fn.extend( { - find: function( selector ) { - var i, ret, - len = this.length, - self = this; - - if ( typeof selector !== "string" ) { - return this.pushStack( jQuery( selector ).filter( function() { - for ( i = 0; i < len; i++ ) { - if ( jQuery.contains( self[ i ], this ) ) { - return true; - } - } - } ) ); - } - - ret = this.pushStack( [] ); - - for ( i = 0; i < len; i++ ) { - jQuery.find( selector, self[ i ], ret ); - } - - return len > 1 ? jQuery.uniqueSort( ret ) : ret; - }, - filter: function( selector ) { - return this.pushStack( winnow( this, selector || [], false ) ); - }, - not: function( selector ) { - return this.pushStack( winnow( this, selector || [], true ) ); - }, - is: function( selector ) { - return !!winnow( - this, - - // If this is a positional/relative selector, check membership in the returned set - // so $("p:first").is("p:last") won't return true for a doc with two "p". - typeof selector === "string" && rneedsContext.test( selector ) ? - jQuery( selector ) : - selector || [], - false - ).length; - } -} ); - - -// Initialize a jQuery object - - -// A central reference to the root jQuery(document) -var rootjQuery, - - // A simple way to check for HTML strings - // Prioritize #id over to avoid XSS via location.hash (#9521) - // Strict HTML recognition (#11290: must start with <) - // Shortcut simple #id case for speed - rquickExpr = /^(?:\s*(<[\w\W]+>)[^>]*|#([\w-]+))$/, - - init = jQuery.fn.init = function( selector, context, root ) { - var match, elem; - - // HANDLE: $(""), $(null), $(undefined), $(false) - if ( !selector ) { - return this; - } - - // Method init() accepts an alternate rootjQuery - // so migrate can support jQuery.sub (gh-2101) - root = root || rootjQuery; - - // Handle HTML strings - if ( typeof selector === "string" ) { - if ( selector[ 0 ] === "<" && - selector[ selector.length - 1 ] === ">" && - selector.length >= 3 ) { - - // Assume that strings that start and end with <> are HTML and skip the regex check - match = [ null, selector, null ]; - - } else { - match = rquickExpr.exec( selector ); - } - - // Match html or make sure no context is specified for #id - if ( match && ( match[ 1 ] || !context ) ) { - - // HANDLE: $(html) -> $(array) - if ( match[ 1 ] ) { - context = context instanceof jQuery ? context[ 0 ] : context; - - // Option to run scripts is true for back-compat - // Intentionally let the error be thrown if parseHTML is not present - jQuery.merge( this, jQuery.parseHTML( - match[ 1 ], - context && context.nodeType ? context.ownerDocument || context : document, - true - ) ); - - // HANDLE: $(html, props) - if ( rsingleTag.test( match[ 1 ] ) && jQuery.isPlainObject( context ) ) { - for ( match in context ) { - - // Properties of context are called as methods if possible - if ( isFunction( this[ match ] ) ) { - this[ match ]( context[ match ] ); - - // ...and otherwise set as attributes - } else { - this.attr( match, context[ match ] ); - } - } - } - - return this; - - // HANDLE: $(#id) - } else { - elem = document.getElementById( match[ 2 ] ); - - if ( elem ) { - - // Inject the element directly into the jQuery object - this[ 0 ] = elem; - this.length = 1; - } - return this; - } - - // HANDLE: $(expr, $(...)) - } else if ( !context || context.jquery ) { - return ( context || root ).find( selector ); - - // HANDLE: $(expr, context) - // (which is just equivalent to: $(context).find(expr) - } else { - return this.constructor( context ).find( selector ); - } - - // HANDLE: $(DOMElement) - } else if ( selector.nodeType ) { - this[ 0 ] = selector; - this.length = 1; - return this; - - // HANDLE: $(function) - // Shortcut for document ready - } else if ( isFunction( selector ) ) { - return root.ready !== undefined ? - root.ready( selector ) : - - // Execute immediately if ready is not present - selector( jQuery ); - } - - return jQuery.makeArray( selector, this ); - }; - -// Give the init function the jQuery prototype for later instantiation -init.prototype = jQuery.fn; - -// Initialize central reference -rootjQuery = jQuery( document ); - - -var rparentsprev = /^(?:parents|prev(?:Until|All))/, - - // Methods guaranteed to produce a unique set when starting from a unique set - guaranteedUnique = { - children: true, - contents: true, - next: true, - prev: true - }; - -jQuery.fn.extend( { - has: function( target ) { - var targets = jQuery( target, this ), - l = targets.length; - - return this.filter( function() { - var i = 0; - for ( ; i < l; i++ ) { - if ( jQuery.contains( this, targets[ i ] ) ) { - return true; - } - } - } ); - }, - - closest: function( selectors, context ) { - var cur, - i = 0, - l = this.length, - matched = [], - targets = typeof selectors !== "string" && jQuery( selectors ); - - // Positional selectors never match, since there's no _selection_ context - if ( !rneedsContext.test( selectors ) ) { - for ( ; i < l; i++ ) { - for ( cur = this[ i ]; cur && cur !== context; cur = cur.parentNode ) { - - // Always skip document fragments - if ( cur.nodeType < 11 && ( targets ? - targets.index( cur ) > -1 : - - // Don't pass non-elements to Sizzle - cur.nodeType === 1 && - jQuery.find.matchesSelector( cur, selectors ) ) ) { - - matched.push( cur ); - break; - } - } - } - } - - return this.pushStack( matched.length > 1 ? jQuery.uniqueSort( matched ) : matched ); - }, - - // Determine the position of an element within the set - index: function( elem ) { - - // No argument, return index in parent - if ( !elem ) { - return ( this[ 0 ] && this[ 0 ].parentNode ) ? this.first().prevAll().length : -1; - } - - // Index in selector - if ( typeof elem === "string" ) { - return indexOf.call( jQuery( elem ), this[ 0 ] ); - } - - // Locate the position of the desired element - return indexOf.call( this, - - // If it receives a jQuery object, the first element is used - elem.jquery ? elem[ 0 ] : elem - ); - }, - - add: function( selector, context ) { - return this.pushStack( - jQuery.uniqueSort( - jQuery.merge( this.get(), jQuery( selector, context ) ) - ) - ); - }, - - addBack: function( selector ) { - return this.add( selector == null ? - this.prevObject : this.prevObject.filter( selector ) - ); - } -} ); - -function sibling( cur, dir ) { - while ( ( cur = cur[ dir ] ) && cur.nodeType !== 1 ) {} - return cur; -} - -jQuery.each( { - parent: function( elem ) { - var parent = elem.parentNode; - return parent && parent.nodeType !== 11 ? parent : null; - }, - parents: function( elem ) { - return dir( elem, "parentNode" ); - }, - parentsUntil: function( elem, _i, until ) { - return dir( elem, "parentNode", until ); - }, - next: function( elem ) { - return sibling( elem, "nextSibling" ); - }, - prev: function( elem ) { - return sibling( elem, "previousSibling" ); - }, - nextAll: function( elem ) { - return dir( elem, "nextSibling" ); - }, - prevAll: function( elem ) { - return dir( elem, "previousSibling" ); - }, - nextUntil: function( elem, _i, until ) { - return dir( elem, "nextSibling", until ); - }, - prevUntil: function( elem, _i, until ) { - return dir( elem, "previousSibling", until ); - }, - siblings: function( elem ) { - return siblings( ( elem.parentNode || {} ).firstChild, elem ); - }, - children: function( elem ) { - return siblings( elem.firstChild ); - }, - contents: function( elem ) { - if ( elem.contentDocument != null && - - // Support: IE 11+ - // elements with no `data` attribute has an object - // `contentDocument` with a `null` prototype. - getProto( elem.contentDocument ) ) { - - return elem.contentDocument; - } - - // Support: IE 9 - 11 only, iOS 7 only, Android Browser <=4.3 only - // Treat the template element as a regular one in browsers that - // don't support it. - if ( nodeName( elem, "template" ) ) { - elem = elem.content || elem; - } - - return jQuery.merge( [], elem.childNodes ); - } -}, function( name, fn ) { - jQuery.fn[ name ] = function( until, selector ) { - var matched = jQuery.map( this, fn, until ); - - if ( name.slice( -5 ) !== "Until" ) { - selector = until; - } - - if ( selector && typeof selector === "string" ) { - matched = jQuery.filter( selector, matched ); - } - - if ( this.length > 1 ) { - - // Remove duplicates - if ( !guaranteedUnique[ name ] ) { - jQuery.uniqueSort( matched ); - } - - // Reverse order for parents* and prev-derivatives - if ( rparentsprev.test( name ) ) { - matched.reverse(); - } - } - - return this.pushStack( matched ); - }; -} ); -var rnothtmlwhite = ( /[^\x20\t\r\n\f]+/g ); - - - -// Convert String-formatted options into Object-formatted ones -function createOptions( options ) { - var object = {}; - jQuery.each( options.match( rnothtmlwhite ) || [], function( _, flag ) { - object[ flag ] = true; - } ); - return object; -} - -/* - * Create a callback list using the following parameters: - * - * options: an optional list of space-separated options that will change how - * the callback list behaves or a more traditional option object - * - * By default a callback list will act like an event callback list and can be - * "fired" multiple times. - * - * Possible options: - * - * once: will ensure the callback list can only be fired once (like a Deferred) - * - * memory: will keep track of previous values and will call any callback added - * after the list has been fired right away with the latest "memorized" - * values (like a Deferred) - * - * unique: will ensure a callback can only be added once (no duplicate in the list) - * - * stopOnFalse: interrupt callings when a callback returns false - * - */ -jQuery.Callbacks = function( options ) { - - // Convert options from String-formatted to Object-formatted if needed - // (we check in cache first) - options = typeof options === "string" ? - createOptions( options ) : - jQuery.extend( {}, options ); - - var // Flag to know if list is currently firing - firing, - - // Last fire value for non-forgettable lists - memory, - - // Flag to know if list was already fired - fired, - - // Flag to prevent firing - locked, - - // Actual callback list - list = [], - - // Queue of execution data for repeatable lists - queue = [], - - // Index of currently firing callback (modified by add/remove as needed) - firingIndex = -1, - - // Fire callbacks - fire = function() { - - // Enforce single-firing - locked = locked || options.once; - - // Execute callbacks for all pending executions, - // respecting firingIndex overrides and runtime changes - fired = firing = true; - for ( ; queue.length; firingIndex = -1 ) { - memory = queue.shift(); - while ( ++firingIndex < list.length ) { - - // Run callback and check for early termination - if ( list[ firingIndex ].apply( memory[ 0 ], memory[ 1 ] ) === false && - options.stopOnFalse ) { - - // Jump to end and forget the data so .add doesn't re-fire - firingIndex = list.length; - memory = false; - } - } - } - - // Forget the data if we're done with it - if ( !options.memory ) { - memory = false; - } - - firing = false; - - // Clean up if we're done firing for good - if ( locked ) { - - // Keep an empty list if we have data for future add calls - if ( memory ) { - list = []; - - // Otherwise, this object is spent - } else { - list = ""; - } - } - }, - - // Actual Callbacks object - self = { - - // Add a callback or a collection of callbacks to the list - add: function() { - if ( list ) { - - // If we have memory from a past run, we should fire after adding - if ( memory && !firing ) { - firingIndex = list.length - 1; - queue.push( memory ); - } - - ( function add( args ) { - jQuery.each( args, function( _, arg ) { - if ( isFunction( arg ) ) { - if ( !options.unique || !self.has( arg ) ) { - list.push( arg ); - } - } else if ( arg && arg.length && toType( arg ) !== "string" ) { - - // Inspect recursively - add( arg ); - } - } ); - } )( arguments ); - - if ( memory && !firing ) { - fire(); - } - } - return this; - }, - - // Remove a callback from the list - remove: function() { - jQuery.each( arguments, function( _, arg ) { - var index; - while ( ( index = jQuery.inArray( arg, list, index ) ) > -1 ) { - list.splice( index, 1 ); - - // Handle firing indexes - if ( index <= firingIndex ) { - firingIndex--; - } - } - } ); - return this; - }, - - // Check if a given callback is in the list. - // If no argument is given, return whether or not list has callbacks attached. - has: function( fn ) { - return fn ? - jQuery.inArray( fn, list ) > -1 : - list.length > 0; - }, - - // Remove all callbacks from the list - empty: function() { - if ( list ) { - list = []; - } - return this; - }, - - // Disable .fire and .add - // Abort any current/pending executions - // Clear all callbacks and values - disable: function() { - locked = queue = []; - list = memory = ""; - return this; - }, - disabled: function() { - return !list; - }, - - // Disable .fire - // Also disable .add unless we have memory (since it would have no effect) - // Abort any pending executions - lock: function() { - locked = queue = []; - if ( !memory && !firing ) { - list = memory = ""; - } - return this; - }, - locked: function() { - return !!locked; - }, - - // Call all callbacks with the given context and arguments - fireWith: function( context, args ) { - if ( !locked ) { - args = args || []; - args = [ context, args.slice ? args.slice() : args ]; - queue.push( args ); - if ( !firing ) { - fire(); - } - } - return this; - }, - - // Call all the callbacks with the given arguments - fire: function() { - self.fireWith( this, arguments ); - return this; - }, - - // To know if the callbacks have already been called at least once - fired: function() { - return !!fired; - } - }; - - return self; -}; - - -function Identity( v ) { - return v; -} -function Thrower( ex ) { - throw ex; -} - -function adoptValue( value, resolve, reject, noValue ) { - var method; - - try { - - // Check for promise aspect first to privilege synchronous behavior - if ( value && isFunction( ( method = value.promise ) ) ) { - method.call( value ).done( resolve ).fail( reject ); - - // Other thenables - } else if ( value && isFunction( ( method = value.then ) ) ) { - method.call( value, resolve, reject ); - - // Other non-thenables - } else { - - // Control `resolve` arguments by letting Array#slice cast boolean `noValue` to integer: - // * false: [ value ].slice( 0 ) => resolve( value ) - // * true: [ value ].slice( 1 ) => resolve() - resolve.apply( undefined, [ value ].slice( noValue ) ); - } - - // For Promises/A+, convert exceptions into rejections - // Since jQuery.when doesn't unwrap thenables, we can skip the extra checks appearing in - // Deferred#then to conditionally suppress rejection. - } catch ( value ) { - - // Support: Android 4.0 only - // Strict mode functions invoked without .call/.apply get global-object context - reject.apply( undefined, [ value ] ); - } -} - -jQuery.extend( { - - Deferred: function( func ) { - var tuples = [ - - // action, add listener, callbacks, - // ... .then handlers, argument index, [final state] - [ "notify", "progress", jQuery.Callbacks( "memory" ), - jQuery.Callbacks( "memory" ), 2 ], - [ "resolve", "done", jQuery.Callbacks( "once memory" ), - jQuery.Callbacks( "once memory" ), 0, "resolved" ], - [ "reject", "fail", jQuery.Callbacks( "once memory" ), - jQuery.Callbacks( "once memory" ), 1, "rejected" ] - ], - state = "pending", - promise = { - state: function() { - return state; - }, - always: function() { - deferred.done( arguments ).fail( arguments ); - return this; - }, - "catch": function( fn ) { - return promise.then( null, fn ); - }, - - // Keep pipe for back-compat - pipe: function( /* fnDone, fnFail, fnProgress */ ) { - var fns = arguments; - - return jQuery.Deferred( function( newDefer ) { - jQuery.each( tuples, function( _i, tuple ) { - - // Map tuples (progress, done, fail) to arguments (done, fail, progress) - var fn = isFunction( fns[ tuple[ 4 ] ] ) && fns[ tuple[ 4 ] ]; - - // deferred.progress(function() { bind to newDefer or newDefer.notify }) - // deferred.done(function() { bind to newDefer or newDefer.resolve }) - // deferred.fail(function() { bind to newDefer or newDefer.reject }) - deferred[ tuple[ 1 ] ]( function() { - var returned = fn && fn.apply( this, arguments ); - if ( returned && isFunction( returned.promise ) ) { - returned.promise() - .progress( newDefer.notify ) - .done( newDefer.resolve ) - .fail( newDefer.reject ); - } else { - newDefer[ tuple[ 0 ] + "With" ]( - this, - fn ? [ returned ] : arguments - ); - } - } ); - } ); - fns = null; - } ).promise(); - }, - then: function( onFulfilled, onRejected, onProgress ) { - var maxDepth = 0; - function resolve( depth, deferred, handler, special ) { - return function() { - var that = this, - args = arguments, - mightThrow = function() { - var returned, then; - - // Support: Promises/A+ section 2.3.3.3.3 - // https://promisesaplus.com/#point-59 - // Ignore double-resolution attempts - if ( depth < maxDepth ) { - return; - } - - returned = handler.apply( that, args ); - - // Support: Promises/A+ section 2.3.1 - // https://promisesaplus.com/#point-48 - if ( returned === deferred.promise() ) { - throw new TypeError( "Thenable self-resolution" ); - } - - // Support: Promises/A+ sections 2.3.3.1, 3.5 - // https://promisesaplus.com/#point-54 - // https://promisesaplus.com/#point-75 - // Retrieve `then` only once - then = returned && - - // Support: Promises/A+ section 2.3.4 - // https://promisesaplus.com/#point-64 - // Only check objects and functions for thenability - ( typeof returned === "object" || - typeof returned === "function" ) && - returned.then; - - // Handle a returned thenable - if ( isFunction( then ) ) { - - // Special processors (notify) just wait for resolution - if ( special ) { - then.call( - returned, - resolve( maxDepth, deferred, Identity, special ), - resolve( maxDepth, deferred, Thrower, special ) - ); - - // Normal processors (resolve) also hook into progress - } else { - - // ...and disregard older resolution values - maxDepth++; - - then.call( - returned, - resolve( maxDepth, deferred, Identity, special ), - resolve( maxDepth, deferred, Thrower, special ), - resolve( maxDepth, deferred, Identity, - deferred.notifyWith ) - ); - } - - // Handle all other returned values - } else { - - // Only substitute handlers pass on context - // and multiple values (non-spec behavior) - if ( handler !== Identity ) { - that = undefined; - args = [ returned ]; - } - - // Process the value(s) - // Default process is resolve - ( special || deferred.resolveWith )( that, args ); - } - }, - - // Only normal processors (resolve) catch and reject exceptions - process = special ? - mightThrow : - function() { - try { - mightThrow(); - } catch ( e ) { - - if ( jQuery.Deferred.exceptionHook ) { - jQuery.Deferred.exceptionHook( e, - process.stackTrace ); - } - - // Support: Promises/A+ section 2.3.3.3.4.1 - // https://promisesaplus.com/#point-61 - // Ignore post-resolution exceptions - if ( depth + 1 >= maxDepth ) { - - // Only substitute handlers pass on context - // and multiple values (non-spec behavior) - if ( handler !== Thrower ) { - that = undefined; - args = [ e ]; - } - - deferred.rejectWith( that, args ); - } - } - }; - - // Support: Promises/A+ section 2.3.3.3.1 - // https://promisesaplus.com/#point-57 - // Re-resolve promises immediately to dodge false rejection from - // subsequent errors - if ( depth ) { - process(); - } else { - - // Call an optional hook to record the stack, in case of exception - // since it's otherwise lost when execution goes async - if ( jQuery.Deferred.getStackHook ) { - process.stackTrace = jQuery.Deferred.getStackHook(); - } - window.setTimeout( process ); - } - }; - } - - return jQuery.Deferred( function( newDefer ) { - - // progress_handlers.add( ... ) - tuples[ 0 ][ 3 ].add( - resolve( - 0, - newDefer, - isFunction( onProgress ) ? - onProgress : - Identity, - newDefer.notifyWith - ) - ); - - // fulfilled_handlers.add( ... ) - tuples[ 1 ][ 3 ].add( - resolve( - 0, - newDefer, - isFunction( onFulfilled ) ? - onFulfilled : - Identity - ) - ); - - // rejected_handlers.add( ... ) - tuples[ 2 ][ 3 ].add( - resolve( - 0, - newDefer, - isFunction( onRejected ) ? - onRejected : - Thrower - ) - ); - } ).promise(); - }, - - // Get a promise for this deferred - // If obj is provided, the promise aspect is added to the object - promise: function( obj ) { - return obj != null ? jQuery.extend( obj, promise ) : promise; - } - }, - deferred = {}; - - // Add list-specific methods - jQuery.each( tuples, function( i, tuple ) { - var list = tuple[ 2 ], - stateString = tuple[ 5 ]; - - // promise.progress = list.add - // promise.done = list.add - // promise.fail = list.add - promise[ tuple[ 1 ] ] = list.add; - - // Handle state - if ( stateString ) { - list.add( - function() { - - // state = "resolved" (i.e., fulfilled) - // state = "rejected" - state = stateString; - }, - - // rejected_callbacks.disable - // fulfilled_callbacks.disable - tuples[ 3 - i ][ 2 ].disable, - - // rejected_handlers.disable - // fulfilled_handlers.disable - tuples[ 3 - i ][ 3 ].disable, - - // progress_callbacks.lock - tuples[ 0 ][ 2 ].lock, - - // progress_handlers.lock - tuples[ 0 ][ 3 ].lock - ); - } - - // progress_handlers.fire - // fulfilled_handlers.fire - // rejected_handlers.fire - list.add( tuple[ 3 ].fire ); - - // deferred.notify = function() { deferred.notifyWith(...) } - // deferred.resolve = function() { deferred.resolveWith(...) } - // deferred.reject = function() { deferred.rejectWith(...) } - deferred[ tuple[ 0 ] ] = function() { - deferred[ tuple[ 0 ] + "With" ]( this === deferred ? undefined : this, arguments ); - return this; - }; - - // deferred.notifyWith = list.fireWith - // deferred.resolveWith = list.fireWith - // deferred.rejectWith = list.fireWith - deferred[ tuple[ 0 ] + "With" ] = list.fireWith; - } ); - - // Make the deferred a promise - promise.promise( deferred ); - - // Call given func if any - if ( func ) { - func.call( deferred, deferred ); - } - - // All done! - return deferred; - }, - - // Deferred helper - when: function( singleValue ) { - var - - // count of uncompleted subordinates - remaining = arguments.length, - - // count of unprocessed arguments - i = remaining, - - // subordinate fulfillment data - resolveContexts = Array( i ), - resolveValues = slice.call( arguments ), - - // the primary Deferred - primary = jQuery.Deferred(), - - // subordinate callback factory - updateFunc = function( i ) { - return function( value ) { - resolveContexts[ i ] = this; - resolveValues[ i ] = arguments.length > 1 ? slice.call( arguments ) : value; - if ( !( --remaining ) ) { - primary.resolveWith( resolveContexts, resolveValues ); - } - }; - }; - - // Single- and empty arguments are adopted like Promise.resolve - if ( remaining <= 1 ) { - adoptValue( singleValue, primary.done( updateFunc( i ) ).resolve, primary.reject, - !remaining ); - - // Use .then() to unwrap secondary thenables (cf. gh-3000) - if ( primary.state() === "pending" || - isFunction( resolveValues[ i ] && resolveValues[ i ].then ) ) { - - return primary.then(); - } - } - - // Multiple arguments are aggregated like Promise.all array elements - while ( i-- ) { - adoptValue( resolveValues[ i ], updateFunc( i ), primary.reject ); - } - - return primary.promise(); - } -} ); - - -// These usually indicate a programmer mistake during development, -// warn about them ASAP rather than swallowing them by default. -var rerrorNames = /^(Eval|Internal|Range|Reference|Syntax|Type|URI)Error$/; - -jQuery.Deferred.exceptionHook = function( error, stack ) { - - // Support: IE 8 - 9 only - // Console exists when dev tools are open, which can happen at any time - if ( window.console && window.console.warn && error && rerrorNames.test( error.name ) ) { - window.console.warn( "jQuery.Deferred exception: " + error.message, error.stack, stack ); - } -}; - - - - -jQuery.readyException = function( error ) { - window.setTimeout( function() { - throw error; - } ); -}; - - - - -// The deferred used on DOM ready -var readyList = jQuery.Deferred(); - -jQuery.fn.ready = function( fn ) { - - readyList - .then( fn ) - - // Wrap jQuery.readyException in a function so that the lookup - // happens at the time of error handling instead of callback - // registration. - .catch( function( error ) { - jQuery.readyException( error ); - } ); - - return this; -}; - -jQuery.extend( { - - // Is the DOM ready to be used? Set to true once it occurs. - isReady: false, - - // A counter to track how many items to wait for before - // the ready event fires. See #6781 - readyWait: 1, - - // Handle when the DOM is ready - ready: function( wait ) { - - // Abort if there are pending holds or we're already ready - if ( wait === true ? --jQuery.readyWait : jQuery.isReady ) { - return; - } - - // Remember that the DOM is ready - jQuery.isReady = true; - - // If a normal DOM Ready event fired, decrement, and wait if need be - if ( wait !== true && --jQuery.readyWait > 0 ) { - return; - } - - // If there are functions bound, to execute - readyList.resolveWith( document, [ jQuery ] ); - } -} ); - -jQuery.ready.then = readyList.then; - -// The ready event handler and self cleanup method -function completed() { - document.removeEventListener( "DOMContentLoaded", completed ); - window.removeEventListener( "load", completed ); - jQuery.ready(); -} - -// Catch cases where $(document).ready() is called -// after the browser event has already occurred. -// Support: IE <=9 - 10 only -// Older IE sometimes signals "interactive" too soon -if ( document.readyState === "complete" || - ( document.readyState !== "loading" && !document.documentElement.doScroll ) ) { - - // Handle it asynchronously to allow scripts the opportunity to delay ready - window.setTimeout( jQuery.ready ); - -} else { - - // Use the handy event callback - document.addEventListener( "DOMContentLoaded", completed ); - - // A fallback to window.onload, that will always work - window.addEventListener( "load", completed ); -} - - - - -// Multifunctional method to get and set values of a collection -// The value/s can optionally be executed if it's a function -var access = function( elems, fn, key, value, chainable, emptyGet, raw ) { - var i = 0, - len = elems.length, - bulk = key == null; - - // Sets many values - if ( toType( key ) === "object" ) { - chainable = true; - for ( i in key ) { - access( elems, fn, i, key[ i ], true, emptyGet, raw ); - } - - // Sets one value - } else if ( value !== undefined ) { - chainable = true; - - if ( !isFunction( value ) ) { - raw = true; - } - - if ( bulk ) { - - // Bulk operations run against the entire set - if ( raw ) { - fn.call( elems, value ); - fn = null; - - // ...except when executing function values - } else { - bulk = fn; - fn = function( elem, _key, value ) { - return bulk.call( jQuery( elem ), value ); - }; - } - } - - if ( fn ) { - for ( ; i < len; i++ ) { - fn( - elems[ i ], key, raw ? - value : - value.call( elems[ i ], i, fn( elems[ i ], key ) ) - ); - } - } - } - - if ( chainable ) { - return elems; - } - - // Gets - if ( bulk ) { - return fn.call( elems ); - } - - return len ? fn( elems[ 0 ], key ) : emptyGet; -}; - - -// Matches dashed string for camelizing -var rmsPrefix = /^-ms-/, - rdashAlpha = /-([a-z])/g; - -// Used by camelCase as callback to replace() -function fcamelCase( _all, letter ) { - return letter.toUpperCase(); -} - -// Convert dashed to camelCase; used by the css and data modules -// Support: IE <=9 - 11, Edge 12 - 15 -// Microsoft forgot to hump their vendor prefix (#9572) -function camelCase( string ) { - return string.replace( rmsPrefix, "ms-" ).replace( rdashAlpha, fcamelCase ); -} -var acceptData = function( owner ) { - - // Accepts only: - // - Node - // - Node.ELEMENT_NODE - // - Node.DOCUMENT_NODE - // - Object - // - Any - return owner.nodeType === 1 || owner.nodeType === 9 || !( +owner.nodeType ); -}; - - - - -function Data() { - this.expando = jQuery.expando + Data.uid++; -} - -Data.uid = 1; - -Data.prototype = { - - cache: function( owner ) { - - // Check if the owner object already has a cache - var value = owner[ this.expando ]; - - // If not, create one - if ( !value ) { - value = {}; - - // We can accept data for non-element nodes in modern browsers, - // but we should not, see #8335. - // Always return an empty object. - if ( acceptData( owner ) ) { - - // If it is a node unlikely to be stringify-ed or looped over - // use plain assignment - if ( owner.nodeType ) { - owner[ this.expando ] = value; - - // Otherwise secure it in a non-enumerable property - // configurable must be true to allow the property to be - // deleted when data is removed - } else { - Object.defineProperty( owner, this.expando, { - value: value, - configurable: true - } ); - } - } - } - - return value; - }, - set: function( owner, data, value ) { - var prop, - cache = this.cache( owner ); - - // Handle: [ owner, key, value ] args - // Always use camelCase key (gh-2257) - if ( typeof data === "string" ) { - cache[ camelCase( data ) ] = value; - - // Handle: [ owner, { properties } ] args - } else { - - // Copy the properties one-by-one to the cache object - for ( prop in data ) { - cache[ camelCase( prop ) ] = data[ prop ]; - } - } - return cache; - }, - get: function( owner, key ) { - return key === undefined ? - this.cache( owner ) : - - // Always use camelCase key (gh-2257) - owner[ this.expando ] && owner[ this.expando ][ camelCase( key ) ]; - }, - access: function( owner, key, value ) { - - // In cases where either: - // - // 1. No key was specified - // 2. A string key was specified, but no value provided - // - // Take the "read" path and allow the get method to determine - // which value to return, respectively either: - // - // 1. The entire cache object - // 2. The data stored at the key - // - if ( key === undefined || - ( ( key && typeof key === "string" ) && value === undefined ) ) { - - return this.get( owner, key ); - } - - // When the key is not a string, or both a key and value - // are specified, set or extend (existing objects) with either: - // - // 1. An object of properties - // 2. A key and value - // - this.set( owner, key, value ); - - // Since the "set" path can have two possible entry points - // return the expected data based on which path was taken[*] - return value !== undefined ? value : key; - }, - remove: function( owner, key ) { - var i, - cache = owner[ this.expando ]; - - if ( cache === undefined ) { - return; - } - - if ( key !== undefined ) { - - // Support array or space separated string of keys - if ( Array.isArray( key ) ) { - - // If key is an array of keys... - // We always set camelCase keys, so remove that. - key = key.map( camelCase ); - } else { - key = camelCase( key ); - - // If a key with the spaces exists, use it. - // Otherwise, create an array by matching non-whitespace - key = key in cache ? - [ key ] : - ( key.match( rnothtmlwhite ) || [] ); - } - - i = key.length; - - while ( i-- ) { - delete cache[ key[ i ] ]; - } - } - - // Remove the expando if there's no more data - if ( key === undefined || jQuery.isEmptyObject( cache ) ) { - - // Support: Chrome <=35 - 45 - // Webkit & Blink performance suffers when deleting properties - // from DOM nodes, so set to undefined instead - // https://bugs.chromium.org/p/chromium/issues/detail?id=378607 (bug restricted) - if ( owner.nodeType ) { - owner[ this.expando ] = undefined; - } else { - delete owner[ this.expando ]; - } - } - }, - hasData: function( owner ) { - var cache = owner[ this.expando ]; - return cache !== undefined && !jQuery.isEmptyObject( cache ); - } -}; -var dataPriv = new Data(); - -var dataUser = new Data(); - - - -// Implementation Summary -// -// 1. Enforce API surface and semantic compatibility with 1.9.x branch -// 2. Improve the module's maintainability by reducing the storage -// paths to a single mechanism. -// 3. Use the same single mechanism to support "private" and "user" data. -// 4. _Never_ expose "private" data to user code (TODO: Drop _data, _removeData) -// 5. Avoid exposing implementation details on user objects (eg. expando properties) -// 6. Provide a clear path for implementation upgrade to WeakMap in 2014 - -var rbrace = /^(?:\{[\w\W]*\}|\[[\w\W]*\])$/, - rmultiDash = /[A-Z]/g; - -function getData( data ) { - if ( data === "true" ) { - return true; - } - - if ( data === "false" ) { - return false; - } - - if ( data === "null" ) { - return null; - } - - // Only convert to a number if it doesn't change the string - if ( data === +data + "" ) { - return +data; - } - - if ( rbrace.test( data ) ) { - return JSON.parse( data ); - } - - return data; -} - -function dataAttr( elem, key, data ) { - var name; - - // If nothing was found internally, try to fetch any - // data from the HTML5 data-* attribute - if ( data === undefined && elem.nodeType === 1 ) { - name = "data-" + key.replace( rmultiDash, "-$&" ).toLowerCase(); - data = elem.getAttribute( name ); - - if ( typeof data === "string" ) { - try { - data = getData( data ); - } catch ( e ) {} - - // Make sure we set the data so it isn't changed later - dataUser.set( elem, key, data ); - } else { - data = undefined; - } - } - return data; -} - -jQuery.extend( { - hasData: function( elem ) { - return dataUser.hasData( elem ) || dataPriv.hasData( elem ); - }, - - data: function( elem, name, data ) { - return dataUser.access( elem, name, data ); - }, - - removeData: function( elem, name ) { - dataUser.remove( elem, name ); - }, - - // TODO: Now that all calls to _data and _removeData have been replaced - // with direct calls to dataPriv methods, these can be deprecated. - _data: function( elem, name, data ) { - return dataPriv.access( elem, name, data ); - }, - - _removeData: function( elem, name ) { - dataPriv.remove( elem, name ); - } -} ); - -jQuery.fn.extend( { - data: function( key, value ) { - var i, name, data, - elem = this[ 0 ], - attrs = elem && elem.attributes; - - // Gets all values - if ( key === undefined ) { - if ( this.length ) { - data = dataUser.get( elem ); - - if ( elem.nodeType === 1 && !dataPriv.get( elem, "hasDataAttrs" ) ) { - i = attrs.length; - while ( i-- ) { - - // Support: IE 11 only - // The attrs elements can be null (#14894) - if ( attrs[ i ] ) { - name = attrs[ i ].name; - if ( name.indexOf( "data-" ) === 0 ) { - name = camelCase( name.slice( 5 ) ); - dataAttr( elem, name, data[ name ] ); - } - } - } - dataPriv.set( elem, "hasDataAttrs", true ); - } - } - - return data; - } - - // Sets multiple values - if ( typeof key === "object" ) { - return this.each( function() { - dataUser.set( this, key ); - } ); - } - - return access( this, function( value ) { - var data; - - // The calling jQuery object (element matches) is not empty - // (and therefore has an element appears at this[ 0 ]) and the - // `value` parameter was not undefined. An empty jQuery object - // will result in `undefined` for elem = this[ 0 ] which will - // throw an exception if an attempt to read a data cache is made. - if ( elem && value === undefined ) { - - // Attempt to get data from the cache - // The key will always be camelCased in Data - data = dataUser.get( elem, key ); - if ( data !== undefined ) { - return data; - } - - // Attempt to "discover" the data in - // HTML5 custom data-* attrs - data = dataAttr( elem, key ); - if ( data !== undefined ) { - return data; - } - - // We tried really hard, but the data doesn't exist. - return; - } - - // Set the data... - this.each( function() { - - // We always store the camelCased key - dataUser.set( this, key, value ); - } ); - }, null, value, arguments.length > 1, null, true ); - }, - - removeData: function( key ) { - return this.each( function() { - dataUser.remove( this, key ); - } ); - } -} ); - - -jQuery.extend( { - queue: function( elem, type, data ) { - var queue; - - if ( elem ) { - type = ( type || "fx" ) + "queue"; - queue = dataPriv.get( elem, type ); - - // Speed up dequeue by getting out quickly if this is just a lookup - if ( data ) { - if ( !queue || Array.isArray( data ) ) { - queue = dataPriv.access( elem, type, jQuery.makeArray( data ) ); - } else { - queue.push( data ); - } - } - return queue || []; - } - }, - - dequeue: function( elem, type ) { - type = type || "fx"; - - var queue = jQuery.queue( elem, type ), - startLength = queue.length, - fn = queue.shift(), - hooks = jQuery._queueHooks( elem, type ), - next = function() { - jQuery.dequeue( elem, type ); - }; - - // If the fx queue is dequeued, always remove the progress sentinel - if ( fn === "inprogress" ) { - fn = queue.shift(); - startLength--; - } - - if ( fn ) { - - // Add a progress sentinel to prevent the fx queue from being - // automatically dequeued - if ( type === "fx" ) { - queue.unshift( "inprogress" ); - } - - // Clear up the last queue stop function - delete hooks.stop; - fn.call( elem, next, hooks ); - } - - if ( !startLength && hooks ) { - hooks.empty.fire(); - } - }, - - // Not public - generate a queueHooks object, or return the current one - _queueHooks: function( elem, type ) { - var key = type + "queueHooks"; - return dataPriv.get( elem, key ) || dataPriv.access( elem, key, { - empty: jQuery.Callbacks( "once memory" ).add( function() { - dataPriv.remove( elem, [ type + "queue", key ] ); - } ) - } ); - } -} ); - -jQuery.fn.extend( { - queue: function( type, data ) { - var setter = 2; - - if ( typeof type !== "string" ) { - data = type; - type = "fx"; - setter--; - } - - if ( arguments.length < setter ) { - return jQuery.queue( this[ 0 ], type ); - } - - return data === undefined ? - this : - this.each( function() { - var queue = jQuery.queue( this, type, data ); - - // Ensure a hooks for this queue - jQuery._queueHooks( this, type ); - - if ( type === "fx" && queue[ 0 ] !== "inprogress" ) { - jQuery.dequeue( this, type ); - } - } ); - }, - dequeue: function( type ) { - return this.each( function() { - jQuery.dequeue( this, type ); - } ); - }, - clearQueue: function( type ) { - return this.queue( type || "fx", [] ); - }, - - // Get a promise resolved when queues of a certain type - // are emptied (fx is the type by default) - promise: function( type, obj ) { - var tmp, - count = 1, - defer = jQuery.Deferred(), - elements = this, - i = this.length, - resolve = function() { - if ( !( --count ) ) { - defer.resolveWith( elements, [ elements ] ); - } - }; - - if ( typeof type !== "string" ) { - obj = type; - type = undefined; - } - type = type || "fx"; - - while ( i-- ) { - tmp = dataPriv.get( elements[ i ], type + "queueHooks" ); - if ( tmp && tmp.empty ) { - count++; - tmp.empty.add( resolve ); - } - } - resolve(); - return defer.promise( obj ); - } -} ); -var pnum = ( /[+-]?(?:\d*\.|)\d+(?:[eE][+-]?\d+|)/ ).source; - -var rcssNum = new RegExp( "^(?:([+-])=|)(" + pnum + ")([a-z%]*)$", "i" ); - - -var cssExpand = [ "Top", "Right", "Bottom", "Left" ]; - -var documentElement = document.documentElement; - - - - var isAttached = function( elem ) { - return jQuery.contains( elem.ownerDocument, elem ); - }, - composed = { composed: true }; - - // Support: IE 9 - 11+, Edge 12 - 18+, iOS 10.0 - 10.2 only - // Check attachment across shadow DOM boundaries when possible (gh-3504) - // Support: iOS 10.0-10.2 only - // Early iOS 10 versions support `attachShadow` but not `getRootNode`, - // leading to errors. We need to check for `getRootNode`. - if ( documentElement.getRootNode ) { - isAttached = function( elem ) { - return jQuery.contains( elem.ownerDocument, elem ) || - elem.getRootNode( composed ) === elem.ownerDocument; - }; - } -var isHiddenWithinTree = function( elem, el ) { - - // isHiddenWithinTree might be called from jQuery#filter function; - // in that case, element will be second argument - elem = el || elem; - - // Inline style trumps all - return elem.style.display === "none" || - elem.style.display === "" && - - // Otherwise, check computed style - // Support: Firefox <=43 - 45 - // Disconnected elements can have computed display: none, so first confirm that elem is - // in the document. - isAttached( elem ) && - - jQuery.css( elem, "display" ) === "none"; - }; - - - -function adjustCSS( elem, prop, valueParts, tween ) { - var adjusted, scale, - maxIterations = 20, - currentValue = tween ? - function() { - return tween.cur(); - } : - function() { - return jQuery.css( elem, prop, "" ); - }, - initial = currentValue(), - unit = valueParts && valueParts[ 3 ] || ( jQuery.cssNumber[ prop ] ? "" : "px" ), - - // Starting value computation is required for potential unit mismatches - initialInUnit = elem.nodeType && - ( jQuery.cssNumber[ prop ] || unit !== "px" && +initial ) && - rcssNum.exec( jQuery.css( elem, prop ) ); - - if ( initialInUnit && initialInUnit[ 3 ] !== unit ) { - - // Support: Firefox <=54 - // Halve the iteration target value to prevent interference from CSS upper bounds (gh-2144) - initial = initial / 2; - - // Trust units reported by jQuery.css - unit = unit || initialInUnit[ 3 ]; - - // Iteratively approximate from a nonzero starting point - initialInUnit = +initial || 1; - - while ( maxIterations-- ) { - - // Evaluate and update our best guess (doubling guesses that zero out). - // Finish if the scale equals or crosses 1 (making the old*new product non-positive). - jQuery.style( elem, prop, initialInUnit + unit ); - if ( ( 1 - scale ) * ( 1 - ( scale = currentValue() / initial || 0.5 ) ) <= 0 ) { - maxIterations = 0; - } - initialInUnit = initialInUnit / scale; - - } - - initialInUnit = initialInUnit * 2; - jQuery.style( elem, prop, initialInUnit + unit ); - - // Make sure we update the tween properties later on - valueParts = valueParts || []; - } - - if ( valueParts ) { - initialInUnit = +initialInUnit || +initial || 0; - - // Apply relative offset (+=/-=) if specified - adjusted = valueParts[ 1 ] ? - initialInUnit + ( valueParts[ 1 ] + 1 ) * valueParts[ 2 ] : - +valueParts[ 2 ]; - if ( tween ) { - tween.unit = unit; - tween.start = initialInUnit; - tween.end = adjusted; - } - } - return adjusted; -} - - -var defaultDisplayMap = {}; - -function getDefaultDisplay( elem ) { - var temp, - doc = elem.ownerDocument, - nodeName = elem.nodeName, - display = defaultDisplayMap[ nodeName ]; - - if ( display ) { - return display; - } - - temp = doc.body.appendChild( doc.createElement( nodeName ) ); - display = jQuery.css( temp, "display" ); - - temp.parentNode.removeChild( temp ); - - if ( display === "none" ) { - display = "block"; - } - defaultDisplayMap[ nodeName ] = display; - - return display; -} - -function showHide( elements, show ) { - var display, elem, - values = [], - index = 0, - length = elements.length; - - // Determine new display value for elements that need to change - for ( ; index < length; index++ ) { - elem = elements[ index ]; - if ( !elem.style ) { - continue; - } - - display = elem.style.display; - if ( show ) { - - // Since we force visibility upon cascade-hidden elements, an immediate (and slow) - // check is required in this first loop unless we have a nonempty display value (either - // inline or about-to-be-restored) - if ( display === "none" ) { - values[ index ] = dataPriv.get( elem, "display" ) || null; - if ( !values[ index ] ) { - elem.style.display = ""; - } - } - if ( elem.style.display === "" && isHiddenWithinTree( elem ) ) { - values[ index ] = getDefaultDisplay( elem ); - } - } else { - if ( display !== "none" ) { - values[ index ] = "none"; - - // Remember what we're overwriting - dataPriv.set( elem, "display", display ); - } - } - } - - // Set the display of the elements in a second loop to avoid constant reflow - for ( index = 0; index < length; index++ ) { - if ( values[ index ] != null ) { - elements[ index ].style.display = values[ index ]; - } - } - - return elements; -} - -jQuery.fn.extend( { - show: function() { - return showHide( this, true ); - }, - hide: function() { - return showHide( this ); - }, - toggle: function( state ) { - if ( typeof state === "boolean" ) { - return state ? this.show() : this.hide(); - } - - return this.each( function() { - if ( isHiddenWithinTree( this ) ) { - jQuery( this ).show(); - } else { - jQuery( this ).hide(); - } - } ); - } -} ); -var rcheckableType = ( /^(?:checkbox|radio)$/i ); - -var rtagName = ( /<([a-z][^\/\0>\x20\t\r\n\f]*)/i ); - -var rscriptType = ( /^$|^module$|\/(?:java|ecma)script/i ); - - - -( function() { - var fragment = document.createDocumentFragment(), - div = fragment.appendChild( document.createElement( "div" ) ), - input = document.createElement( "input" ); - - // Support: Android 4.0 - 4.3 only - // Check state lost if the name is set (#11217) - // Support: Windows Web Apps (WWA) - // `name` and `type` must use .setAttribute for WWA (#14901) - input.setAttribute( "type", "radio" ); - input.setAttribute( "checked", "checked" ); - input.setAttribute( "name", "t" ); - - div.appendChild( input ); - - // Support: Android <=4.1 only - // Older WebKit doesn't clone checked state correctly in fragments - support.checkClone = div.cloneNode( true ).cloneNode( true ).lastChild.checked; - - // Support: IE <=11 only - // Make sure textarea (and checkbox) defaultValue is properly cloned - div.innerHTML = ""; - support.noCloneChecked = !!div.cloneNode( true ).lastChild.defaultValue; - - // Support: IE <=9 only - // IE <=9 replaces "; - support.option = !!div.lastChild; -} )(); - - -// We have to close these tags to support XHTML (#13200) -var wrapMap = { - - // XHTML parsers do not magically insert elements in the - // same way that tag soup parsers do. So we cannot shorten - // this by omitting or other required elements. - thead: [ 1, "", "
" ], - col: [ 2, "", "
" ], - tr: [ 2, "", "
" ], - td: [ 3, "", "
" ], - - _default: [ 0, "", "" ] -}; - -wrapMap.tbody = wrapMap.tfoot = wrapMap.colgroup = wrapMap.caption = wrapMap.thead; -wrapMap.th = wrapMap.td; - -// Support: IE <=9 only -if ( !support.option ) { - wrapMap.optgroup = wrapMap.option = [ 1, "" ]; -} - - -function getAll( context, tag ) { - - // Support: IE <=9 - 11 only - // Use typeof to avoid zero-argument method invocation on host objects (#15151) - var ret; - - if ( typeof context.getElementsByTagName !== "undefined" ) { - ret = context.getElementsByTagName( tag || "*" ); - - } else if ( typeof context.querySelectorAll !== "undefined" ) { - ret = context.querySelectorAll( tag || "*" ); - - } else { - ret = []; - } - - if ( tag === undefined || tag && nodeName( context, tag ) ) { - return jQuery.merge( [ context ], ret ); - } - - return ret; -} - - -// Mark scripts as having already been evaluated -function setGlobalEval( elems, refElements ) { - var i = 0, - l = elems.length; - - for ( ; i < l; i++ ) { - dataPriv.set( - elems[ i ], - "globalEval", - !refElements || dataPriv.get( refElements[ i ], "globalEval" ) - ); - } -} - - -var rhtml = /<|&#?\w+;/; - -function buildFragment( elems, context, scripts, selection, ignored ) { - var elem, tmp, tag, wrap, attached, j, - fragment = context.createDocumentFragment(), - nodes = [], - i = 0, - l = elems.length; - - for ( ; i < l; i++ ) { - elem = elems[ i ]; - - if ( elem || elem === 0 ) { - - // Add nodes directly - if ( toType( elem ) === "object" ) { - - // Support: Android <=4.0 only, PhantomJS 1 only - // push.apply(_, arraylike) throws on ancient WebKit - jQuery.merge( nodes, elem.nodeType ? [ elem ] : elem ); - - // Convert non-html into a text node - } else if ( !rhtml.test( elem ) ) { - nodes.push( context.createTextNode( elem ) ); - - // Convert html into DOM nodes - } else { - tmp = tmp || fragment.appendChild( context.createElement( "div" ) ); - - // Deserialize a standard representation - tag = ( rtagName.exec( elem ) || [ "", "" ] )[ 1 ].toLowerCase(); - wrap = wrapMap[ tag ] || wrapMap._default; - tmp.innerHTML = wrap[ 1 ] + jQuery.htmlPrefilter( elem ) + wrap[ 2 ]; - - // Descend through wrappers to the right content - j = wrap[ 0 ]; - while ( j-- ) { - tmp = tmp.lastChild; - } - - // Support: Android <=4.0 only, PhantomJS 1 only - // push.apply(_, arraylike) throws on ancient WebKit - jQuery.merge( nodes, tmp.childNodes ); - - // Remember the top-level container - tmp = fragment.firstChild; - - // Ensure the created nodes are orphaned (#12392) - tmp.textContent = ""; - } - } - } - - // Remove wrapper from fragment - fragment.textContent = ""; - - i = 0; - while ( ( elem = nodes[ i++ ] ) ) { - - // Skip elements already in the context collection (trac-4087) - if ( selection && jQuery.inArray( elem, selection ) > -1 ) { - if ( ignored ) { - ignored.push( elem ); - } - continue; - } - - attached = isAttached( elem ); - - // Append to fragment - tmp = getAll( fragment.appendChild( elem ), "script" ); - - // Preserve script evaluation history - if ( attached ) { - setGlobalEval( tmp ); - } - - // Capture executables - if ( scripts ) { - j = 0; - while ( ( elem = tmp[ j++ ] ) ) { - if ( rscriptType.test( elem.type || "" ) ) { - scripts.push( elem ); - } - } - } - } - - return fragment; -} - - -var rtypenamespace = /^([^.]*)(?:\.(.+)|)/; - -function returnTrue() { - return true; -} - -function returnFalse() { - return false; -} - -// Support: IE <=9 - 11+ -// focus() and blur() are asynchronous, except when they are no-op. -// So expect focus to be synchronous when the element is already active, -// and blur to be synchronous when the element is not already active. -// (focus and blur are always synchronous in other supported browsers, -// this just defines when we can count on it). -function expectSync( elem, type ) { - return ( elem === safeActiveElement() ) === ( type === "focus" ); -} - -// Support: IE <=9 only -// Accessing document.activeElement can throw unexpectedly -// https://bugs.jquery.com/ticket/13393 -function safeActiveElement() { - try { - return document.activeElement; - } catch ( err ) { } -} - -function on( elem, types, selector, data, fn, one ) { - var origFn, type; - - // Types can be a map of types/handlers - if ( typeof types === "object" ) { - - // ( types-Object, selector, data ) - if ( typeof selector !== "string" ) { - - // ( types-Object, data ) - data = data || selector; - selector = undefined; - } - for ( type in types ) { - on( elem, type, selector, data, types[ type ], one ); - } - return elem; - } - - if ( data == null && fn == null ) { - - // ( types, fn ) - fn = selector; - data = selector = undefined; - } else if ( fn == null ) { - if ( typeof selector === "string" ) { - - // ( types, selector, fn ) - fn = data; - data = undefined; - } else { - - // ( types, data, fn ) - fn = data; - data = selector; - selector = undefined; - } - } - if ( fn === false ) { - fn = returnFalse; - } else if ( !fn ) { - return elem; - } - - if ( one === 1 ) { - origFn = fn; - fn = function( event ) { - - // Can use an empty set, since event contains the info - jQuery().off( event ); - return origFn.apply( this, arguments ); - }; - - // Use same guid so caller can remove using origFn - fn.guid = origFn.guid || ( origFn.guid = jQuery.guid++ ); - } - return elem.each( function() { - jQuery.event.add( this, types, fn, data, selector ); - } ); -} - -/* - * Helper functions for managing events -- not part of the public interface. - * Props to Dean Edwards' addEvent library for many of the ideas. - */ -jQuery.event = { - - global: {}, - - add: function( elem, types, handler, data, selector ) { - - var handleObjIn, eventHandle, tmp, - events, t, handleObj, - special, handlers, type, namespaces, origType, - elemData = dataPriv.get( elem ); - - // Only attach events to objects that accept data - if ( !acceptData( elem ) ) { - return; - } - - // Caller can pass in an object of custom data in lieu of the handler - if ( handler.handler ) { - handleObjIn = handler; - handler = handleObjIn.handler; - selector = handleObjIn.selector; - } - - // Ensure that invalid selectors throw exceptions at attach time - // Evaluate against documentElement in case elem is a non-element node (e.g., document) - if ( selector ) { - jQuery.find.matchesSelector( documentElement, selector ); - } - - // Make sure that the handler has a unique ID, used to find/remove it later - if ( !handler.guid ) { - handler.guid = jQuery.guid++; - } - - // Init the element's event structure and main handler, if this is the first - if ( !( events = elemData.events ) ) { - events = elemData.events = Object.create( null ); - } - if ( !( eventHandle = elemData.handle ) ) { - eventHandle = elemData.handle = function( e ) { - - // Discard the second event of a jQuery.event.trigger() and - // when an event is called after a page has unloaded - return typeof jQuery !== "undefined" && jQuery.event.triggered !== e.type ? - jQuery.event.dispatch.apply( elem, arguments ) : undefined; - }; - } - - // Handle multiple events separated by a space - types = ( types || "" ).match( rnothtmlwhite ) || [ "" ]; - t = types.length; - while ( t-- ) { - tmp = rtypenamespace.exec( types[ t ] ) || []; - type = origType = tmp[ 1 ]; - namespaces = ( tmp[ 2 ] || "" ).split( "." ).sort(); - - // There *must* be a type, no attaching namespace-only handlers - if ( !type ) { - continue; - } - - // If event changes its type, use the special event handlers for the changed type - special = jQuery.event.special[ type ] || {}; - - // If selector defined, determine special event api type, otherwise given type - type = ( selector ? special.delegateType : special.bindType ) || type; - - // Update special based on newly reset type - special = jQuery.event.special[ type ] || {}; - - // handleObj is passed to all event handlers - handleObj = jQuery.extend( { - type: type, - origType: origType, - data: data, - handler: handler, - guid: handler.guid, - selector: selector, - needsContext: selector && jQuery.expr.match.needsContext.test( selector ), - namespace: namespaces.join( "." ) - }, handleObjIn ); - - // Init the event handler queue if we're the first - if ( !( handlers = events[ type ] ) ) { - handlers = events[ type ] = []; - handlers.delegateCount = 0; - - // Only use addEventListener if the special events handler returns false - if ( !special.setup || - special.setup.call( elem, data, namespaces, eventHandle ) === false ) { - - if ( elem.addEventListener ) { - elem.addEventListener( type, eventHandle ); - } - } - } - - if ( special.add ) { - special.add.call( elem, handleObj ); - - if ( !handleObj.handler.guid ) { - handleObj.handler.guid = handler.guid; - } - } - - // Add to the element's handler list, delegates in front - if ( selector ) { - handlers.splice( handlers.delegateCount++, 0, handleObj ); - } else { - handlers.push( handleObj ); - } - - // Keep track of which events have ever been used, for event optimization - jQuery.event.global[ type ] = true; - } - - }, - - // Detach an event or set of events from an element - remove: function( elem, types, handler, selector, mappedTypes ) { - - var j, origCount, tmp, - events, t, handleObj, - special, handlers, type, namespaces, origType, - elemData = dataPriv.hasData( elem ) && dataPriv.get( elem ); - - if ( !elemData || !( events = elemData.events ) ) { - return; - } - - // Once for each type.namespace in types; type may be omitted - types = ( types || "" ).match( rnothtmlwhite ) || [ "" ]; - t = types.length; - while ( t-- ) { - tmp = rtypenamespace.exec( types[ t ] ) || []; - type = origType = tmp[ 1 ]; - namespaces = ( tmp[ 2 ] || "" ).split( "." ).sort(); - - // Unbind all events (on this namespace, if provided) for the element - if ( !type ) { - for ( type in events ) { - jQuery.event.remove( elem, type + types[ t ], handler, selector, true ); - } - continue; - } - - special = jQuery.event.special[ type ] || {}; - type = ( selector ? special.delegateType : special.bindType ) || type; - handlers = events[ type ] || []; - tmp = tmp[ 2 ] && - new RegExp( "(^|\\.)" + namespaces.join( "\\.(?:.*\\.|)" ) + "(\\.|$)" ); - - // Remove matching events - origCount = j = handlers.length; - while ( j-- ) { - handleObj = handlers[ j ]; - - if ( ( mappedTypes || origType === handleObj.origType ) && - ( !handler || handler.guid === handleObj.guid ) && - ( !tmp || tmp.test( handleObj.namespace ) ) && - ( !selector || selector === handleObj.selector || - selector === "**" && handleObj.selector ) ) { - handlers.splice( j, 1 ); - - if ( handleObj.selector ) { - handlers.delegateCount--; - } - if ( special.remove ) { - special.remove.call( elem, handleObj ); - } - } - } - - // Remove generic event handler if we removed something and no more handlers exist - // (avoids potential for endless recursion during removal of special event handlers) - if ( origCount && !handlers.length ) { - if ( !special.teardown || - special.teardown.call( elem, namespaces, elemData.handle ) === false ) { - - jQuery.removeEvent( elem, type, elemData.handle ); - } - - delete events[ type ]; - } - } - - // Remove data and the expando if it's no longer used - if ( jQuery.isEmptyObject( events ) ) { - dataPriv.remove( elem, "handle events" ); - } - }, - - dispatch: function( nativeEvent ) { - - var i, j, ret, matched, handleObj, handlerQueue, - args = new Array( arguments.length ), - - // Make a writable jQuery.Event from the native event object - event = jQuery.event.fix( nativeEvent ), - - handlers = ( - dataPriv.get( this, "events" ) || Object.create( null ) - )[ event.type ] || [], - special = jQuery.event.special[ event.type ] || {}; - - // Use the fix-ed jQuery.Event rather than the (read-only) native event - args[ 0 ] = event; - - for ( i = 1; i < arguments.length; i++ ) { - args[ i ] = arguments[ i ]; - } - - event.delegateTarget = this; - - // Call the preDispatch hook for the mapped type, and let it bail if desired - if ( special.preDispatch && special.preDispatch.call( this, event ) === false ) { - return; - } - - // Determine handlers - handlerQueue = jQuery.event.handlers.call( this, event, handlers ); - - // Run delegates first; they may want to stop propagation beneath us - i = 0; - while ( ( matched = handlerQueue[ i++ ] ) && !event.isPropagationStopped() ) { - event.currentTarget = matched.elem; - - j = 0; - while ( ( handleObj = matched.handlers[ j++ ] ) && - !event.isImmediatePropagationStopped() ) { - - // If the event is namespaced, then each handler is only invoked if it is - // specially universal or its namespaces are a superset of the event's. - if ( !event.rnamespace || handleObj.namespace === false || - event.rnamespace.test( handleObj.namespace ) ) { - - event.handleObj = handleObj; - event.data = handleObj.data; - - ret = ( ( jQuery.event.special[ handleObj.origType ] || {} ).handle || - handleObj.handler ).apply( matched.elem, args ); - - if ( ret !== undefined ) { - if ( ( event.result = ret ) === false ) { - event.preventDefault(); - event.stopPropagation(); - } - } - } - } - } - - // Call the postDispatch hook for the mapped type - if ( special.postDispatch ) { - special.postDispatch.call( this, event ); - } - - return event.result; - }, - - handlers: function( event, handlers ) { - var i, handleObj, sel, matchedHandlers, matchedSelectors, - handlerQueue = [], - delegateCount = handlers.delegateCount, - cur = event.target; - - // Find delegate handlers - if ( delegateCount && - - // Support: IE <=9 - // Black-hole SVG instance trees (trac-13180) - cur.nodeType && - - // Support: Firefox <=42 - // Suppress spec-violating clicks indicating a non-primary pointer button (trac-3861) - // https://www.w3.org/TR/DOM-Level-3-Events/#event-type-click - // Support: IE 11 only - // ...but not arrow key "clicks" of radio inputs, which can have `button` -1 (gh-2343) - !( event.type === "click" && event.button >= 1 ) ) { - - for ( ; cur !== this; cur = cur.parentNode || this ) { - - // Don't check non-elements (#13208) - // Don't process clicks on disabled elements (#6911, #8165, #11382, #11764) - if ( cur.nodeType === 1 && !( event.type === "click" && cur.disabled === true ) ) { - matchedHandlers = []; - matchedSelectors = {}; - for ( i = 0; i < delegateCount; i++ ) { - handleObj = handlers[ i ]; - - // Don't conflict with Object.prototype properties (#13203) - sel = handleObj.selector + " "; - - if ( matchedSelectors[ sel ] === undefined ) { - matchedSelectors[ sel ] = handleObj.needsContext ? - jQuery( sel, this ).index( cur ) > -1 : - jQuery.find( sel, this, null, [ cur ] ).length; - } - if ( matchedSelectors[ sel ] ) { - matchedHandlers.push( handleObj ); - } - } - if ( matchedHandlers.length ) { - handlerQueue.push( { elem: cur, handlers: matchedHandlers } ); - } - } - } - } - - // Add the remaining (directly-bound) handlers - cur = this; - if ( delegateCount < handlers.length ) { - handlerQueue.push( { elem: cur, handlers: handlers.slice( delegateCount ) } ); - } - - return handlerQueue; - }, - - addProp: function( name, hook ) { - Object.defineProperty( jQuery.Event.prototype, name, { - enumerable: true, - configurable: true, - - get: isFunction( hook ) ? - function() { - if ( this.originalEvent ) { - return hook( this.originalEvent ); - } - } : - function() { - if ( this.originalEvent ) { - return this.originalEvent[ name ]; - } - }, - - set: function( value ) { - Object.defineProperty( this, name, { - enumerable: true, - configurable: true, - writable: true, - value: value - } ); - } - } ); - }, - - fix: function( originalEvent ) { - return originalEvent[ jQuery.expando ] ? - originalEvent : - new jQuery.Event( originalEvent ); - }, - - special: { - load: { - - // Prevent triggered image.load events from bubbling to window.load - noBubble: true - }, - click: { - - // Utilize native event to ensure correct state for checkable inputs - setup: function( data ) { - - // For mutual compressibility with _default, replace `this` access with a local var. - // `|| data` is dead code meant only to preserve the variable through minification. - var el = this || data; - - // Claim the first handler - if ( rcheckableType.test( el.type ) && - el.click && nodeName( el, "input" ) ) { - - // dataPriv.set( el, "click", ... ) - leverageNative( el, "click", returnTrue ); - } - - // Return false to allow normal processing in the caller - return false; - }, - trigger: function( data ) { - - // For mutual compressibility with _default, replace `this` access with a local var. - // `|| data` is dead code meant only to preserve the variable through minification. - var el = this || data; - - // Force setup before triggering a click - if ( rcheckableType.test( el.type ) && - el.click && nodeName( el, "input" ) ) { - - leverageNative( el, "click" ); - } - - // Return non-false to allow normal event-path propagation - return true; - }, - - // For cross-browser consistency, suppress native .click() on links - // Also prevent it if we're currently inside a leveraged native-event stack - _default: function( event ) { - var target = event.target; - return rcheckableType.test( target.type ) && - target.click && nodeName( target, "input" ) && - dataPriv.get( target, "click" ) || - nodeName( target, "a" ); - } - }, - - beforeunload: { - postDispatch: function( event ) { - - // Support: Firefox 20+ - // Firefox doesn't alert if the returnValue field is not set. - if ( event.result !== undefined && event.originalEvent ) { - event.originalEvent.returnValue = event.result; - } - } - } - } -}; - -// Ensure the presence of an event listener that handles manually-triggered -// synthetic events by interrupting progress until reinvoked in response to -// *native* events that it fires directly, ensuring that state changes have -// already occurred before other listeners are invoked. -function leverageNative( el, type, expectSync ) { - - // Missing expectSync indicates a trigger call, which must force setup through jQuery.event.add - if ( !expectSync ) { - if ( dataPriv.get( el, type ) === undefined ) { - jQuery.event.add( el, type, returnTrue ); - } - return; - } - - // Register the controller as a special universal handler for all event namespaces - dataPriv.set( el, type, false ); - jQuery.event.add( el, type, { - namespace: false, - handler: function( event ) { - var notAsync, result, - saved = dataPriv.get( this, type ); - - if ( ( event.isTrigger & 1 ) && this[ type ] ) { - - // Interrupt processing of the outer synthetic .trigger()ed event - // Saved data should be false in such cases, but might be a leftover capture object - // from an async native handler (gh-4350) - if ( !saved.length ) { - - // Store arguments for use when handling the inner native event - // There will always be at least one argument (an event object), so this array - // will not be confused with a leftover capture object. - saved = slice.call( arguments ); - dataPriv.set( this, type, saved ); - - // Trigger the native event and capture its result - // Support: IE <=9 - 11+ - // focus() and blur() are asynchronous - notAsync = expectSync( this, type ); - this[ type ](); - result = dataPriv.get( this, type ); - if ( saved !== result || notAsync ) { - dataPriv.set( this, type, false ); - } else { - result = {}; - } - if ( saved !== result ) { - - // Cancel the outer synthetic event - event.stopImmediatePropagation(); - event.preventDefault(); - - // Support: Chrome 86+ - // In Chrome, if an element having a focusout handler is blurred by - // clicking outside of it, it invokes the handler synchronously. If - // that handler calls `.remove()` on the element, the data is cleared, - // leaving `result` undefined. We need to guard against this. - return result && result.value; - } - - // If this is an inner synthetic event for an event with a bubbling surrogate - // (focus or blur), assume that the surrogate already propagated from triggering the - // native event and prevent that from happening again here. - // This technically gets the ordering wrong w.r.t. to `.trigger()` (in which the - // bubbling surrogate propagates *after* the non-bubbling base), but that seems - // less bad than duplication. - } else if ( ( jQuery.event.special[ type ] || {} ).delegateType ) { - event.stopPropagation(); - } - - // If this is a native event triggered above, everything is now in order - // Fire an inner synthetic event with the original arguments - } else if ( saved.length ) { - - // ...and capture the result - dataPriv.set( this, type, { - value: jQuery.event.trigger( - - // Support: IE <=9 - 11+ - // Extend with the prototype to reset the above stopImmediatePropagation() - jQuery.extend( saved[ 0 ], jQuery.Event.prototype ), - saved.slice( 1 ), - this - ) - } ); - - // Abort handling of the native event - event.stopImmediatePropagation(); - } - } - } ); -} - -jQuery.removeEvent = function( elem, type, handle ) { - - // This "if" is needed for plain objects - if ( elem.removeEventListener ) { - elem.removeEventListener( type, handle ); - } -}; - -jQuery.Event = function( src, props ) { - - // Allow instantiation without the 'new' keyword - if ( !( this instanceof jQuery.Event ) ) { - return new jQuery.Event( src, props ); - } - - // Event object - if ( src && src.type ) { - this.originalEvent = src; - this.type = src.type; - - // Events bubbling up the document may have been marked as prevented - // by a handler lower down the tree; reflect the correct value. - this.isDefaultPrevented = src.defaultPrevented || - src.defaultPrevented === undefined && - - // Support: Android <=2.3 only - src.returnValue === false ? - returnTrue : - returnFalse; - - // Create target properties - // Support: Safari <=6 - 7 only - // Target should not be a text node (#504, #13143) - this.target = ( src.target && src.target.nodeType === 3 ) ? - src.target.parentNode : - src.target; - - this.currentTarget = src.currentTarget; - this.relatedTarget = src.relatedTarget; - - // Event type - } else { - this.type = src; - } - - // Put explicitly provided properties onto the event object - if ( props ) { - jQuery.extend( this, props ); - } - - // Create a timestamp if incoming event doesn't have one - this.timeStamp = src && src.timeStamp || Date.now(); - - // Mark it as fixed - this[ jQuery.expando ] = true; -}; - -// jQuery.Event is based on DOM3 Events as specified by the ECMAScript Language Binding -// https://www.w3.org/TR/2003/WD-DOM-Level-3-Events-20030331/ecma-script-binding.html -jQuery.Event.prototype = { - constructor: jQuery.Event, - isDefaultPrevented: returnFalse, - isPropagationStopped: returnFalse, - isImmediatePropagationStopped: returnFalse, - isSimulated: false, - - preventDefault: function() { - var e = this.originalEvent; - - this.isDefaultPrevented = returnTrue; - - if ( e && !this.isSimulated ) { - e.preventDefault(); - } - }, - stopPropagation: function() { - var e = this.originalEvent; - - this.isPropagationStopped = returnTrue; - - if ( e && !this.isSimulated ) { - e.stopPropagation(); - } - }, - stopImmediatePropagation: function() { - var e = this.originalEvent; - - this.isImmediatePropagationStopped = returnTrue; - - if ( e && !this.isSimulated ) { - e.stopImmediatePropagation(); - } - - this.stopPropagation(); - } -}; - -// Includes all common event props including KeyEvent and MouseEvent specific props -jQuery.each( { - altKey: true, - bubbles: true, - cancelable: true, - changedTouches: true, - ctrlKey: true, - detail: true, - eventPhase: true, - metaKey: true, - pageX: true, - pageY: true, - shiftKey: true, - view: true, - "char": true, - code: true, - charCode: true, - key: true, - keyCode: true, - button: true, - buttons: true, - clientX: true, - clientY: true, - offsetX: true, - offsetY: true, - pointerId: true, - pointerType: true, - screenX: true, - screenY: true, - targetTouches: true, - toElement: true, - touches: true, - which: true -}, jQuery.event.addProp ); - -jQuery.each( { focus: "focusin", blur: "focusout" }, function( type, delegateType ) { - jQuery.event.special[ type ] = { - - // Utilize native event if possible so blur/focus sequence is correct - setup: function() { - - // Claim the first handler - // dataPriv.set( this, "focus", ... ) - // dataPriv.set( this, "blur", ... ) - leverageNative( this, type, expectSync ); - - // Return false to allow normal processing in the caller - return false; - }, - trigger: function() { - - // Force setup before trigger - leverageNative( this, type ); - - // Return non-false to allow normal event-path propagation - return true; - }, - - // Suppress native focus or blur as it's already being fired - // in leverageNative. - _default: function() { - return true; - }, - - delegateType: delegateType - }; -} ); - -// Create mouseenter/leave events using mouseover/out and event-time checks -// so that event delegation works in jQuery. -// Do the same for pointerenter/pointerleave and pointerover/pointerout -// -// Support: Safari 7 only -// Safari sends mouseenter too often; see: -// https://bugs.chromium.org/p/chromium/issues/detail?id=470258 -// for the description of the bug (it existed in older Chrome versions as well). -jQuery.each( { - mouseenter: "mouseover", - mouseleave: "mouseout", - pointerenter: "pointerover", - pointerleave: "pointerout" -}, function( orig, fix ) { - jQuery.event.special[ orig ] = { - delegateType: fix, - bindType: fix, - - handle: function( event ) { - var ret, - target = this, - related = event.relatedTarget, - handleObj = event.handleObj; - - // For mouseenter/leave call the handler if related is outside the target. - // NB: No relatedTarget if the mouse left/entered the browser window - if ( !related || ( related !== target && !jQuery.contains( target, related ) ) ) { - event.type = handleObj.origType; - ret = handleObj.handler.apply( this, arguments ); - event.type = fix; - } - return ret; - } - }; -} ); - -jQuery.fn.extend( { - - on: function( types, selector, data, fn ) { - return on( this, types, selector, data, fn ); - }, - one: function( types, selector, data, fn ) { - return on( this, types, selector, data, fn, 1 ); - }, - off: function( types, selector, fn ) { - var handleObj, type; - if ( types && types.preventDefault && types.handleObj ) { - - // ( event ) dispatched jQuery.Event - handleObj = types.handleObj; - jQuery( types.delegateTarget ).off( - handleObj.namespace ? - handleObj.origType + "." + handleObj.namespace : - handleObj.origType, - handleObj.selector, - handleObj.handler - ); - return this; - } - if ( typeof types === "object" ) { - - // ( types-object [, selector] ) - for ( type in types ) { - this.off( type, selector, types[ type ] ); - } - return this; - } - if ( selector === false || typeof selector === "function" ) { - - // ( types [, fn] ) - fn = selector; - selector = undefined; - } - if ( fn === false ) { - fn = returnFalse; - } - return this.each( function() { - jQuery.event.remove( this, types, fn, selector ); - } ); - } -} ); - - -var - - // Support: IE <=10 - 11, Edge 12 - 13 only - // In IE/Edge using regex groups here causes severe slowdowns. - // See https://connect.microsoft.com/IE/feedback/details/1736512/ - rnoInnerhtml = /\s*$/g; - -// Prefer a tbody over its parent table for containing new rows -function manipulationTarget( elem, content ) { - if ( nodeName( elem, "table" ) && - nodeName( content.nodeType !== 11 ? content : content.firstChild, "tr" ) ) { - - return jQuery( elem ).children( "tbody" )[ 0 ] || elem; - } - - return elem; -} - -// Replace/restore the type attribute of script elements for safe DOM manipulation -function disableScript( elem ) { - elem.type = ( elem.getAttribute( "type" ) !== null ) + "/" + elem.type; - return elem; -} -function restoreScript( elem ) { - if ( ( elem.type || "" ).slice( 0, 5 ) === "true/" ) { - elem.type = elem.type.slice( 5 ); - } else { - elem.removeAttribute( "type" ); - } - - return elem; -} - -function cloneCopyEvent( src, dest ) { - var i, l, type, pdataOld, udataOld, udataCur, events; - - if ( dest.nodeType !== 1 ) { - return; - } - - // 1. Copy private data: events, handlers, etc. - if ( dataPriv.hasData( src ) ) { - pdataOld = dataPriv.get( src ); - events = pdataOld.events; - - if ( events ) { - dataPriv.remove( dest, "handle events" ); - - for ( type in events ) { - for ( i = 0, l = events[ type ].length; i < l; i++ ) { - jQuery.event.add( dest, type, events[ type ][ i ] ); - } - } - } - } - - // 2. Copy user data - if ( dataUser.hasData( src ) ) { - udataOld = dataUser.access( src ); - udataCur = jQuery.extend( {}, udataOld ); - - dataUser.set( dest, udataCur ); - } -} - -// Fix IE bugs, see support tests -function fixInput( src, dest ) { - var nodeName = dest.nodeName.toLowerCase(); - - // Fails to persist the checked state of a cloned checkbox or radio button. - if ( nodeName === "input" && rcheckableType.test( src.type ) ) { - dest.checked = src.checked; - - // Fails to return the selected option to the default selected state when cloning options - } else if ( nodeName === "input" || nodeName === "textarea" ) { - dest.defaultValue = src.defaultValue; - } -} - -function domManip( collection, args, callback, ignored ) { - - // Flatten any nested arrays - args = flat( args ); - - var fragment, first, scripts, hasScripts, node, doc, - i = 0, - l = collection.length, - iNoClone = l - 1, - value = args[ 0 ], - valueIsFunction = isFunction( value ); - - // We can't cloneNode fragments that contain checked, in WebKit - if ( valueIsFunction || - ( l > 1 && typeof value === "string" && - !support.checkClone && rchecked.test( value ) ) ) { - return collection.each( function( index ) { - var self = collection.eq( index ); - if ( valueIsFunction ) { - args[ 0 ] = value.call( this, index, self.html() ); - } - domManip( self, args, callback, ignored ); - } ); - } - - if ( l ) { - fragment = buildFragment( args, collection[ 0 ].ownerDocument, false, collection, ignored ); - first = fragment.firstChild; - - if ( fragment.childNodes.length === 1 ) { - fragment = first; - } - - // Require either new content or an interest in ignored elements to invoke the callback - if ( first || ignored ) { - scripts = jQuery.map( getAll( fragment, "script" ), disableScript ); - hasScripts = scripts.length; - - // Use the original fragment for the last item - // instead of the first because it can end up - // being emptied incorrectly in certain situations (#8070). - for ( ; i < l; i++ ) { - node = fragment; - - if ( i !== iNoClone ) { - node = jQuery.clone( node, true, true ); - - // Keep references to cloned scripts for later restoration - if ( hasScripts ) { - - // Support: Android <=4.0 only, PhantomJS 1 only - // push.apply(_, arraylike) throws on ancient WebKit - jQuery.merge( scripts, getAll( node, "script" ) ); - } - } - - callback.call( collection[ i ], node, i ); - } - - if ( hasScripts ) { - doc = scripts[ scripts.length - 1 ].ownerDocument; - - // Reenable scripts - jQuery.map( scripts, restoreScript ); - - // Evaluate executable scripts on first document insertion - for ( i = 0; i < hasScripts; i++ ) { - node = scripts[ i ]; - if ( rscriptType.test( node.type || "" ) && - !dataPriv.access( node, "globalEval" ) && - jQuery.contains( doc, node ) ) { - - if ( node.src && ( node.type || "" ).toLowerCase() !== "module" ) { - - // Optional AJAX dependency, but won't run scripts if not present - if ( jQuery._evalUrl && !node.noModule ) { - jQuery._evalUrl( node.src, { - nonce: node.nonce || node.getAttribute( "nonce" ) - }, doc ); - } - } else { - DOMEval( node.textContent.replace( rcleanScript, "" ), node, doc ); - } - } - } - } - } - } - - return collection; -} - -function remove( elem, selector, keepData ) { - var node, - nodes = selector ? jQuery.filter( selector, elem ) : elem, - i = 0; - - for ( ; ( node = nodes[ i ] ) != null; i++ ) { - if ( !keepData && node.nodeType === 1 ) { - jQuery.cleanData( getAll( node ) ); - } - - if ( node.parentNode ) { - if ( keepData && isAttached( node ) ) { - setGlobalEval( getAll( node, "script" ) ); - } - node.parentNode.removeChild( node ); - } - } - - return elem; -} - -jQuery.extend( { - htmlPrefilter: function( html ) { - return html; - }, - - clone: function( elem, dataAndEvents, deepDataAndEvents ) { - var i, l, srcElements, destElements, - clone = elem.cloneNode( true ), - inPage = isAttached( elem ); - - // Fix IE cloning issues - if ( !support.noCloneChecked && ( elem.nodeType === 1 || elem.nodeType === 11 ) && - !jQuery.isXMLDoc( elem ) ) { - - // We eschew Sizzle here for performance reasons: https://jsperf.com/getall-vs-sizzle/2 - destElements = getAll( clone ); - srcElements = getAll( elem ); - - for ( i = 0, l = srcElements.length; i < l; i++ ) { - fixInput( srcElements[ i ], destElements[ i ] ); - } - } - - // Copy the events from the original to the clone - if ( dataAndEvents ) { - if ( deepDataAndEvents ) { - srcElements = srcElements || getAll( elem ); - destElements = destElements || getAll( clone ); - - for ( i = 0, l = srcElements.length; i < l; i++ ) { - cloneCopyEvent( srcElements[ i ], destElements[ i ] ); - } - } else { - cloneCopyEvent( elem, clone ); - } - } - - // Preserve script evaluation history - destElements = getAll( clone, "script" ); - if ( destElements.length > 0 ) { - setGlobalEval( destElements, !inPage && getAll( elem, "script" ) ); - } - - // Return the cloned set - return clone; - }, - - cleanData: function( elems ) { - var data, elem, type, - special = jQuery.event.special, - i = 0; - - for ( ; ( elem = elems[ i ] ) !== undefined; i++ ) { - if ( acceptData( elem ) ) { - if ( ( data = elem[ dataPriv.expando ] ) ) { - if ( data.events ) { - for ( type in data.events ) { - if ( special[ type ] ) { - jQuery.event.remove( elem, type ); - - // This is a shortcut to avoid jQuery.event.remove's overhead - } else { - jQuery.removeEvent( elem, type, data.handle ); - } - } - } - - // Support: Chrome <=35 - 45+ - // Assign undefined instead of using delete, see Data#remove - elem[ dataPriv.expando ] = undefined; - } - if ( elem[ dataUser.expando ] ) { - - // Support: Chrome <=35 - 45+ - // Assign undefined instead of using delete, see Data#remove - elem[ dataUser.expando ] = undefined; - } - } - } - } -} ); - -jQuery.fn.extend( { - detach: function( selector ) { - return remove( this, selector, true ); - }, - - remove: function( selector ) { - return remove( this, selector ); - }, - - text: function( value ) { - return access( this, function( value ) { - return value === undefined ? - jQuery.text( this ) : - this.empty().each( function() { - if ( this.nodeType === 1 || this.nodeType === 11 || this.nodeType === 9 ) { - this.textContent = value; - } - } ); - }, null, value, arguments.length ); - }, - - append: function() { - return domManip( this, arguments, function( elem ) { - if ( this.nodeType === 1 || this.nodeType === 11 || this.nodeType === 9 ) { - var target = manipulationTarget( this, elem ); - target.appendChild( elem ); - } - } ); - }, - - prepend: function() { - return domManip( this, arguments, function( elem ) { - if ( this.nodeType === 1 || this.nodeType === 11 || this.nodeType === 9 ) { - var target = manipulationTarget( this, elem ); - target.insertBefore( elem, target.firstChild ); - } - } ); - }, - - before: function() { - return domManip( this, arguments, function( elem ) { - if ( this.parentNode ) { - this.parentNode.insertBefore( elem, this ); - } - } ); - }, - - after: function() { - return domManip( this, arguments, function( elem ) { - if ( this.parentNode ) { - this.parentNode.insertBefore( elem, this.nextSibling ); - } - } ); - }, - - empty: function() { - var elem, - i = 0; - - for ( ; ( elem = this[ i ] ) != null; i++ ) { - if ( elem.nodeType === 1 ) { - - // Prevent memory leaks - jQuery.cleanData( getAll( elem, false ) ); - - // Remove any remaining nodes - elem.textContent = ""; - } - } - - return this; - }, - - clone: function( dataAndEvents, deepDataAndEvents ) { - dataAndEvents = dataAndEvents == null ? false : dataAndEvents; - deepDataAndEvents = deepDataAndEvents == null ? dataAndEvents : deepDataAndEvents; - - return this.map( function() { - return jQuery.clone( this, dataAndEvents, deepDataAndEvents ); - } ); - }, - - html: function( value ) { - return access( this, function( value ) { - var elem = this[ 0 ] || {}, - i = 0, - l = this.length; - - if ( value === undefined && elem.nodeType === 1 ) { - return elem.innerHTML; - } - - // See if we can take a shortcut and just use innerHTML - if ( typeof value === "string" && !rnoInnerhtml.test( value ) && - !wrapMap[ ( rtagName.exec( value ) || [ "", "" ] )[ 1 ].toLowerCase() ] ) { - - value = jQuery.htmlPrefilter( value ); - - try { - for ( ; i < l; i++ ) { - elem = this[ i ] || {}; - - // Remove element nodes and prevent memory leaks - if ( elem.nodeType === 1 ) { - jQuery.cleanData( getAll( elem, false ) ); - elem.innerHTML = value; - } - } - - elem = 0; - - // If using innerHTML throws an exception, use the fallback method - } catch ( e ) {} - } - - if ( elem ) { - this.empty().append( value ); - } - }, null, value, arguments.length ); - }, - - replaceWith: function() { - var ignored = []; - - // Make the changes, replacing each non-ignored context element with the new content - return domManip( this, arguments, function( elem ) { - var parent = this.parentNode; - - if ( jQuery.inArray( this, ignored ) < 0 ) { - jQuery.cleanData( getAll( this ) ); - if ( parent ) { - parent.replaceChild( elem, this ); - } - } - - // Force callback invocation - }, ignored ); - } -} ); - -jQuery.each( { - appendTo: "append", - prependTo: "prepend", - insertBefore: "before", - insertAfter: "after", - replaceAll: "replaceWith" -}, function( name, original ) { - jQuery.fn[ name ] = function( selector ) { - var elems, - ret = [], - insert = jQuery( selector ), - last = insert.length - 1, - i = 0; - - for ( ; i <= last; i++ ) { - elems = i === last ? this : this.clone( true ); - jQuery( insert[ i ] )[ original ]( elems ); - - // Support: Android <=4.0 only, PhantomJS 1 only - // .get() because push.apply(_, arraylike) throws on ancient WebKit - push.apply( ret, elems.get() ); - } - - return this.pushStack( ret ); - }; -} ); -var rnumnonpx = new RegExp( "^(" + pnum + ")(?!px)[a-z%]+$", "i" ); - -var getStyles = function( elem ) { - - // Support: IE <=11 only, Firefox <=30 (#15098, #14150) - // IE throws on elements created in popups - // FF meanwhile throws on frame elements through "defaultView.getComputedStyle" - var view = elem.ownerDocument.defaultView; - - if ( !view || !view.opener ) { - view = window; - } - - return view.getComputedStyle( elem ); - }; - -var swap = function( elem, options, callback ) { - var ret, name, - old = {}; - - // Remember the old values, and insert the new ones - for ( name in options ) { - old[ name ] = elem.style[ name ]; - elem.style[ name ] = options[ name ]; - } - - ret = callback.call( elem ); - - // Revert the old values - for ( name in options ) { - elem.style[ name ] = old[ name ]; - } - - return ret; -}; - - -var rboxStyle = new RegExp( cssExpand.join( "|" ), "i" ); - - - -( function() { - - // Executing both pixelPosition & boxSizingReliable tests require only one layout - // so they're executed at the same time to save the second computation. - function computeStyleTests() { - - // This is a singleton, we need to execute it only once - if ( !div ) { - return; - } - - container.style.cssText = "position:absolute;left:-11111px;width:60px;" + - "margin-top:1px;padding:0;border:0"; - div.style.cssText = - "position:relative;display:block;box-sizing:border-box;overflow:scroll;" + - "margin:auto;border:1px;padding:1px;" + - "width:60%;top:1%"; - documentElement.appendChild( container ).appendChild( div ); - - var divStyle = window.getComputedStyle( div ); - pixelPositionVal = divStyle.top !== "1%"; - - // Support: Android 4.0 - 4.3 only, Firefox <=3 - 44 - reliableMarginLeftVal = roundPixelMeasures( divStyle.marginLeft ) === 12; - - // Support: Android 4.0 - 4.3 only, Safari <=9.1 - 10.1, iOS <=7.0 - 9.3 - // Some styles come back with percentage values, even though they shouldn't - div.style.right = "60%"; - pixelBoxStylesVal = roundPixelMeasures( divStyle.right ) === 36; - - // Support: IE 9 - 11 only - // Detect misreporting of content dimensions for box-sizing:border-box elements - boxSizingReliableVal = roundPixelMeasures( divStyle.width ) === 36; - - // Support: IE 9 only - // Detect overflow:scroll screwiness (gh-3699) - // Support: Chrome <=64 - // Don't get tricked when zoom affects offsetWidth (gh-4029) - div.style.position = "absolute"; - scrollboxSizeVal = roundPixelMeasures( div.offsetWidth / 3 ) === 12; - - documentElement.removeChild( container ); - - // Nullify the div so it wouldn't be stored in the memory and - // it will also be a sign that checks already performed - div = null; - } - - function roundPixelMeasures( measure ) { - return Math.round( parseFloat( measure ) ); - } - - var pixelPositionVal, boxSizingReliableVal, scrollboxSizeVal, pixelBoxStylesVal, - reliableTrDimensionsVal, reliableMarginLeftVal, - container = document.createElement( "div" ), - div = document.createElement( "div" ); - - // Finish early in limited (non-browser) environments - if ( !div.style ) { - return; - } - - // Support: IE <=9 - 11 only - // Style of cloned element affects source element cloned (#8908) - div.style.backgroundClip = "content-box"; - div.cloneNode( true ).style.backgroundClip = ""; - support.clearCloneStyle = div.style.backgroundClip === "content-box"; - - jQuery.extend( support, { - boxSizingReliable: function() { - computeStyleTests(); - return boxSizingReliableVal; - }, - pixelBoxStyles: function() { - computeStyleTests(); - return pixelBoxStylesVal; - }, - pixelPosition: function() { - computeStyleTests(); - return pixelPositionVal; - }, - reliableMarginLeft: function() { - computeStyleTests(); - return reliableMarginLeftVal; - }, - scrollboxSize: function() { - computeStyleTests(); - return scrollboxSizeVal; - }, - - // Support: IE 9 - 11+, Edge 15 - 18+ - // IE/Edge misreport `getComputedStyle` of table rows with width/height - // set in CSS while `offset*` properties report correct values. - // Behavior in IE 9 is more subtle than in newer versions & it passes - // some versions of this test; make sure not to make it pass there! - // - // Support: Firefox 70+ - // Only Firefox includes border widths - // in computed dimensions. (gh-4529) - reliableTrDimensions: function() { - var table, tr, trChild, trStyle; - if ( reliableTrDimensionsVal == null ) { - table = document.createElement( "table" ); - tr = document.createElement( "tr" ); - trChild = document.createElement( "div" ); - - table.style.cssText = "position:absolute;left:-11111px;border-collapse:separate"; - tr.style.cssText = "border:1px solid"; - - // Support: Chrome 86+ - // Height set through cssText does not get applied. - // Computed height then comes back as 0. - tr.style.height = "1px"; - trChild.style.height = "9px"; - - // Support: Android 8 Chrome 86+ - // In our bodyBackground.html iframe, - // display for all div elements is set to "inline", - // which causes a problem only in Android 8 Chrome 86. - // Ensuring the div is display: block - // gets around this issue. - trChild.style.display = "block"; - - documentElement - .appendChild( table ) - .appendChild( tr ) - .appendChild( trChild ); - - trStyle = window.getComputedStyle( tr ); - reliableTrDimensionsVal = ( parseInt( trStyle.height, 10 ) + - parseInt( trStyle.borderTopWidth, 10 ) + - parseInt( trStyle.borderBottomWidth, 10 ) ) === tr.offsetHeight; - - documentElement.removeChild( table ); - } - return reliableTrDimensionsVal; - } - } ); -} )(); - - -function curCSS( elem, name, computed ) { - var width, minWidth, maxWidth, ret, - - // Support: Firefox 51+ - // Retrieving style before computed somehow - // fixes an issue with getting wrong values - // on detached elements - style = elem.style; - - computed = computed || getStyles( elem ); - - // getPropertyValue is needed for: - // .css('filter') (IE 9 only, #12537) - // .css('--customProperty) (#3144) - if ( computed ) { - ret = computed.getPropertyValue( name ) || computed[ name ]; - - if ( ret === "" && !isAttached( elem ) ) { - ret = jQuery.style( elem, name ); - } - - // A tribute to the "awesome hack by Dean Edwards" - // Android Browser returns percentage for some values, - // but width seems to be reliably pixels. - // This is against the CSSOM draft spec: - // https://drafts.csswg.org/cssom/#resolved-values - if ( !support.pixelBoxStyles() && rnumnonpx.test( ret ) && rboxStyle.test( name ) ) { - - // Remember the original values - width = style.width; - minWidth = style.minWidth; - maxWidth = style.maxWidth; - - // Put in the new values to get a computed value out - style.minWidth = style.maxWidth = style.width = ret; - ret = computed.width; - - // Revert the changed values - style.width = width; - style.minWidth = minWidth; - style.maxWidth = maxWidth; - } - } - - return ret !== undefined ? - - // Support: IE <=9 - 11 only - // IE returns zIndex value as an integer. - ret + "" : - ret; -} - - -function addGetHookIf( conditionFn, hookFn ) { - - // Define the hook, we'll check on the first run if it's really needed. - return { - get: function() { - if ( conditionFn() ) { - - // Hook not needed (or it's not possible to use it due - // to missing dependency), remove it. - delete this.get; - return; - } - - // Hook needed; redefine it so that the support test is not executed again. - return ( this.get = hookFn ).apply( this, arguments ); - } - }; -} - - -var cssPrefixes = [ "Webkit", "Moz", "ms" ], - emptyStyle = document.createElement( "div" ).style, - vendorProps = {}; - -// Return a vendor-prefixed property or undefined -function vendorPropName( name ) { - - // Check for vendor prefixed names - var capName = name[ 0 ].toUpperCase() + name.slice( 1 ), - i = cssPrefixes.length; - - while ( i-- ) { - name = cssPrefixes[ i ] + capName; - if ( name in emptyStyle ) { - return name; - } - } -} - -// Return a potentially-mapped jQuery.cssProps or vendor prefixed property -function finalPropName( name ) { - var final = jQuery.cssProps[ name ] || vendorProps[ name ]; - - if ( final ) { - return final; - } - if ( name in emptyStyle ) { - return name; - } - return vendorProps[ name ] = vendorPropName( name ) || name; -} - - -var - - // Swappable if display is none or starts with table - // except "table", "table-cell", or "table-caption" - // See here for display values: https://developer.mozilla.org/en-US/docs/CSS/display - rdisplayswap = /^(none|table(?!-c[ea]).+)/, - rcustomProp = /^--/, - cssShow = { position: "absolute", visibility: "hidden", display: "block" }, - cssNormalTransform = { - letterSpacing: "0", - fontWeight: "400" - }; - -function setPositiveNumber( _elem, value, subtract ) { - - // Any relative (+/-) values have already been - // normalized at this point - var matches = rcssNum.exec( value ); - return matches ? - - // Guard against undefined "subtract", e.g., when used as in cssHooks - Math.max( 0, matches[ 2 ] - ( subtract || 0 ) ) + ( matches[ 3 ] || "px" ) : - value; -} - -function boxModelAdjustment( elem, dimension, box, isBorderBox, styles, computedVal ) { - var i = dimension === "width" ? 1 : 0, - extra = 0, - delta = 0; - - // Adjustment may not be necessary - if ( box === ( isBorderBox ? "border" : "content" ) ) { - return 0; - } - - for ( ; i < 4; i += 2 ) { - - // Both box models exclude margin - if ( box === "margin" ) { - delta += jQuery.css( elem, box + cssExpand[ i ], true, styles ); - } - - // If we get here with a content-box, we're seeking "padding" or "border" or "margin" - if ( !isBorderBox ) { - - // Add padding - delta += jQuery.css( elem, "padding" + cssExpand[ i ], true, styles ); - - // For "border" or "margin", add border - if ( box !== "padding" ) { - delta += jQuery.css( elem, "border" + cssExpand[ i ] + "Width", true, styles ); - - // But still keep track of it otherwise - } else { - extra += jQuery.css( elem, "border" + cssExpand[ i ] + "Width", true, styles ); - } - - // If we get here with a border-box (content + padding + border), we're seeking "content" or - // "padding" or "margin" - } else { - - // For "content", subtract padding - if ( box === "content" ) { - delta -= jQuery.css( elem, "padding" + cssExpand[ i ], true, styles ); - } - - // For "content" or "padding", subtract border - if ( box !== "margin" ) { - delta -= jQuery.css( elem, "border" + cssExpand[ i ] + "Width", true, styles ); - } - } - } - - // Account for positive content-box scroll gutter when requested by providing computedVal - if ( !isBorderBox && computedVal >= 0 ) { - - // offsetWidth/offsetHeight is a rounded sum of content, padding, scroll gutter, and border - // Assuming integer scroll gutter, subtract the rest and round down - delta += Math.max( 0, Math.ceil( - elem[ "offset" + dimension[ 0 ].toUpperCase() + dimension.slice( 1 ) ] - - computedVal - - delta - - extra - - 0.5 - - // If offsetWidth/offsetHeight is unknown, then we can't determine content-box scroll gutter - // Use an explicit zero to avoid NaN (gh-3964) - ) ) || 0; - } - - return delta; -} - -function getWidthOrHeight( elem, dimension, extra ) { - - // Start with computed style - var styles = getStyles( elem ), - - // To avoid forcing a reflow, only fetch boxSizing if we need it (gh-4322). - // Fake content-box until we know it's needed to know the true value. - boxSizingNeeded = !support.boxSizingReliable() || extra, - isBorderBox = boxSizingNeeded && - jQuery.css( elem, "boxSizing", false, styles ) === "border-box", - valueIsBorderBox = isBorderBox, - - val = curCSS( elem, dimension, styles ), - offsetProp = "offset" + dimension[ 0 ].toUpperCase() + dimension.slice( 1 ); - - // Support: Firefox <=54 - // Return a confounding non-pixel value or feign ignorance, as appropriate. - if ( rnumnonpx.test( val ) ) { - if ( !extra ) { - return val; - } - val = "auto"; - } - - - // Support: IE 9 - 11 only - // Use offsetWidth/offsetHeight for when box sizing is unreliable. - // In those cases, the computed value can be trusted to be border-box. - if ( ( !support.boxSizingReliable() && isBorderBox || - - // Support: IE 10 - 11+, Edge 15 - 18+ - // IE/Edge misreport `getComputedStyle` of table rows with width/height - // set in CSS while `offset*` properties report correct values. - // Interestingly, in some cases IE 9 doesn't suffer from this issue. - !support.reliableTrDimensions() && nodeName( elem, "tr" ) || - - // Fall back to offsetWidth/offsetHeight when value is "auto" - // This happens for inline elements with no explicit setting (gh-3571) - val === "auto" || - - // Support: Android <=4.1 - 4.3 only - // Also use offsetWidth/offsetHeight for misreported inline dimensions (gh-3602) - !parseFloat( val ) && jQuery.css( elem, "display", false, styles ) === "inline" ) && - - // Make sure the element is visible & connected - elem.getClientRects().length ) { - - isBorderBox = jQuery.css( elem, "boxSizing", false, styles ) === "border-box"; - - // Where available, offsetWidth/offsetHeight approximate border box dimensions. - // Where not available (e.g., SVG), assume unreliable box-sizing and interpret the - // retrieved value as a content box dimension. - valueIsBorderBox = offsetProp in elem; - if ( valueIsBorderBox ) { - val = elem[ offsetProp ]; - } - } - - // Normalize "" and auto - val = parseFloat( val ) || 0; - - // Adjust for the element's box model - return ( val + - boxModelAdjustment( - elem, - dimension, - extra || ( isBorderBox ? "border" : "content" ), - valueIsBorderBox, - styles, - - // Provide the current computed size to request scroll gutter calculation (gh-3589) - val - ) - ) + "px"; -} - -jQuery.extend( { - - // Add in style property hooks for overriding the default - // behavior of getting and setting a style property - cssHooks: { - opacity: { - get: function( elem, computed ) { - if ( computed ) { - - // We should always get a number back from opacity - var ret = curCSS( elem, "opacity" ); - return ret === "" ? "1" : ret; - } - } - } - }, - - // Don't automatically add "px" to these possibly-unitless properties - cssNumber: { - "animationIterationCount": true, - "columnCount": true, - "fillOpacity": true, - "flexGrow": true, - "flexShrink": true, - "fontWeight": true, - "gridArea": true, - "gridColumn": true, - "gridColumnEnd": true, - "gridColumnStart": true, - "gridRow": true, - "gridRowEnd": true, - "gridRowStart": true, - "lineHeight": true, - "opacity": true, - "order": true, - "orphans": true, - "widows": true, - "zIndex": true, - "zoom": true - }, - - // Add in properties whose names you wish to fix before - // setting or getting the value - cssProps: {}, - - // Get and set the style property on a DOM Node - style: function( elem, name, value, extra ) { - - // Don't set styles on text and comment nodes - if ( !elem || elem.nodeType === 3 || elem.nodeType === 8 || !elem.style ) { - return; - } - - // Make sure that we're working with the right name - var ret, type, hooks, - origName = camelCase( name ), - isCustomProp = rcustomProp.test( name ), - style = elem.style; - - // Make sure that we're working with the right name. We don't - // want to query the value if it is a CSS custom property - // since they are user-defined. - if ( !isCustomProp ) { - name = finalPropName( origName ); - } - - // Gets hook for the prefixed version, then unprefixed version - hooks = jQuery.cssHooks[ name ] || jQuery.cssHooks[ origName ]; - - // Check if we're setting a value - if ( value !== undefined ) { - type = typeof value; - - // Convert "+=" or "-=" to relative numbers (#7345) - if ( type === "string" && ( ret = rcssNum.exec( value ) ) && ret[ 1 ] ) { - value = adjustCSS( elem, name, ret ); - - // Fixes bug #9237 - type = "number"; - } - - // Make sure that null and NaN values aren't set (#7116) - if ( value == null || value !== value ) { - return; - } - - // If a number was passed in, add the unit (except for certain CSS properties) - // The isCustomProp check can be removed in jQuery 4.0 when we only auto-append - // "px" to a few hardcoded values. - if ( type === "number" && !isCustomProp ) { - value += ret && ret[ 3 ] || ( jQuery.cssNumber[ origName ] ? "" : "px" ); - } - - // background-* props affect original clone's values - if ( !support.clearCloneStyle && value === "" && name.indexOf( "background" ) === 0 ) { - style[ name ] = "inherit"; - } - - // If a hook was provided, use that value, otherwise just set the specified value - if ( !hooks || !( "set" in hooks ) || - ( value = hooks.set( elem, value, extra ) ) !== undefined ) { - - if ( isCustomProp ) { - style.setProperty( name, value ); - } else { - style[ name ] = value; - } - } - - } else { - - // If a hook was provided get the non-computed value from there - if ( hooks && "get" in hooks && - ( ret = hooks.get( elem, false, extra ) ) !== undefined ) { - - return ret; - } - - // Otherwise just get the value from the style object - return style[ name ]; - } - }, - - css: function( elem, name, extra, styles ) { - var val, num, hooks, - origName = camelCase( name ), - isCustomProp = rcustomProp.test( name ); - - // Make sure that we're working with the right name. We don't - // want to modify the value if it is a CSS custom property - // since they are user-defined. - if ( !isCustomProp ) { - name = finalPropName( origName ); - } - - // Try prefixed name followed by the unprefixed name - hooks = jQuery.cssHooks[ name ] || jQuery.cssHooks[ origName ]; - - // If a hook was provided get the computed value from there - if ( hooks && "get" in hooks ) { - val = hooks.get( elem, true, extra ); - } - - // Otherwise, if a way to get the computed value exists, use that - if ( val === undefined ) { - val = curCSS( elem, name, styles ); - } - - // Convert "normal" to computed value - if ( val === "normal" && name in cssNormalTransform ) { - val = cssNormalTransform[ name ]; - } - - // Make numeric if forced or a qualifier was provided and val looks numeric - if ( extra === "" || extra ) { - num = parseFloat( val ); - return extra === true || isFinite( num ) ? num || 0 : val; - } - - return val; - } -} ); - -jQuery.each( [ "height", "width" ], function( _i, dimension ) { - jQuery.cssHooks[ dimension ] = { - get: function( elem, computed, extra ) { - if ( computed ) { - - // Certain elements can have dimension info if we invisibly show them - // but it must have a current display style that would benefit - return rdisplayswap.test( jQuery.css( elem, "display" ) ) && - - // Support: Safari 8+ - // Table columns in Safari have non-zero offsetWidth & zero - // getBoundingClientRect().width unless display is changed. - // Support: IE <=11 only - // Running getBoundingClientRect on a disconnected node - // in IE throws an error. - ( !elem.getClientRects().length || !elem.getBoundingClientRect().width ) ? - swap( elem, cssShow, function() { - return getWidthOrHeight( elem, dimension, extra ); - } ) : - getWidthOrHeight( elem, dimension, extra ); - } - }, - - set: function( elem, value, extra ) { - var matches, - styles = getStyles( elem ), - - // Only read styles.position if the test has a chance to fail - // to avoid forcing a reflow. - scrollboxSizeBuggy = !support.scrollboxSize() && - styles.position === "absolute", - - // To avoid forcing a reflow, only fetch boxSizing if we need it (gh-3991) - boxSizingNeeded = scrollboxSizeBuggy || extra, - isBorderBox = boxSizingNeeded && - jQuery.css( elem, "boxSizing", false, styles ) === "border-box", - subtract = extra ? - boxModelAdjustment( - elem, - dimension, - extra, - isBorderBox, - styles - ) : - 0; - - // Account for unreliable border-box dimensions by comparing offset* to computed and - // faking a content-box to get border and padding (gh-3699) - if ( isBorderBox && scrollboxSizeBuggy ) { - subtract -= Math.ceil( - elem[ "offset" + dimension[ 0 ].toUpperCase() + dimension.slice( 1 ) ] - - parseFloat( styles[ dimension ] ) - - boxModelAdjustment( elem, dimension, "border", false, styles ) - - 0.5 - ); - } - - // Convert to pixels if value adjustment is needed - if ( subtract && ( matches = rcssNum.exec( value ) ) && - ( matches[ 3 ] || "px" ) !== "px" ) { - - elem.style[ dimension ] = value; - value = jQuery.css( elem, dimension ); - } - - return setPositiveNumber( elem, value, subtract ); - } - }; -} ); - -jQuery.cssHooks.marginLeft = addGetHookIf( support.reliableMarginLeft, - function( elem, computed ) { - if ( computed ) { - return ( parseFloat( curCSS( elem, "marginLeft" ) ) || - elem.getBoundingClientRect().left - - swap( elem, { marginLeft: 0 }, function() { - return elem.getBoundingClientRect().left; - } ) - ) + "px"; - } - } -); - -// These hooks are used by animate to expand properties -jQuery.each( { - margin: "", - padding: "", - border: "Width" -}, function( prefix, suffix ) { - jQuery.cssHooks[ prefix + suffix ] = { - expand: function( value ) { - var i = 0, - expanded = {}, - - // Assumes a single number if not a string - parts = typeof value === "string" ? value.split( " " ) : [ value ]; - - for ( ; i < 4; i++ ) { - expanded[ prefix + cssExpand[ i ] + suffix ] = - parts[ i ] || parts[ i - 2 ] || parts[ 0 ]; - } - - return expanded; - } - }; - - if ( prefix !== "margin" ) { - jQuery.cssHooks[ prefix + suffix ].set = setPositiveNumber; - } -} ); - -jQuery.fn.extend( { - css: function( name, value ) { - return access( this, function( elem, name, value ) { - var styles, len, - map = {}, - i = 0; - - if ( Array.isArray( name ) ) { - styles = getStyles( elem ); - len = name.length; - - for ( ; i < len; i++ ) { - map[ name[ i ] ] = jQuery.css( elem, name[ i ], false, styles ); - } - - return map; - } - - return value !== undefined ? - jQuery.style( elem, name, value ) : - jQuery.css( elem, name ); - }, name, value, arguments.length > 1 ); - } -} ); - - -function Tween( elem, options, prop, end, easing ) { - return new Tween.prototype.init( elem, options, prop, end, easing ); -} -jQuery.Tween = Tween; - -Tween.prototype = { - constructor: Tween, - init: function( elem, options, prop, end, easing, unit ) { - this.elem = elem; - this.prop = prop; - this.easing = easing || jQuery.easing._default; - this.options = options; - this.start = this.now = this.cur(); - this.end = end; - this.unit = unit || ( jQuery.cssNumber[ prop ] ? "" : "px" ); - }, - cur: function() { - var hooks = Tween.propHooks[ this.prop ]; - - return hooks && hooks.get ? - hooks.get( this ) : - Tween.propHooks._default.get( this ); - }, - run: function( percent ) { - var eased, - hooks = Tween.propHooks[ this.prop ]; - - if ( this.options.duration ) { - this.pos = eased = jQuery.easing[ this.easing ]( - percent, this.options.duration * percent, 0, 1, this.options.duration - ); - } else { - this.pos = eased = percent; - } - this.now = ( this.end - this.start ) * eased + this.start; - - if ( this.options.step ) { - this.options.step.call( this.elem, this.now, this ); - } - - if ( hooks && hooks.set ) { - hooks.set( this ); - } else { - Tween.propHooks._default.set( this ); - } - return this; - } -}; - -Tween.prototype.init.prototype = Tween.prototype; - -Tween.propHooks = { - _default: { - get: function( tween ) { - var result; - - // Use a property on the element directly when it is not a DOM element, - // or when there is no matching style property that exists. - if ( tween.elem.nodeType !== 1 || - tween.elem[ tween.prop ] != null && tween.elem.style[ tween.prop ] == null ) { - return tween.elem[ tween.prop ]; - } - - // Passing an empty string as a 3rd parameter to .css will automatically - // attempt a parseFloat and fallback to a string if the parse fails. - // Simple values such as "10px" are parsed to Float; - // complex values such as "rotate(1rad)" are returned as-is. - result = jQuery.css( tween.elem, tween.prop, "" ); - - // Empty strings, null, undefined and "auto" are converted to 0. - return !result || result === "auto" ? 0 : result; - }, - set: function( tween ) { - - // Use step hook for back compat. - // Use cssHook if its there. - // Use .style if available and use plain properties where available. - if ( jQuery.fx.step[ tween.prop ] ) { - jQuery.fx.step[ tween.prop ]( tween ); - } else if ( tween.elem.nodeType === 1 && ( - jQuery.cssHooks[ tween.prop ] || - tween.elem.style[ finalPropName( tween.prop ) ] != null ) ) { - jQuery.style( tween.elem, tween.prop, tween.now + tween.unit ); - } else { - tween.elem[ tween.prop ] = tween.now; - } - } - } -}; - -// Support: IE <=9 only -// Panic based approach to setting things on disconnected nodes -Tween.propHooks.scrollTop = Tween.propHooks.scrollLeft = { - set: function( tween ) { - if ( tween.elem.nodeType && tween.elem.parentNode ) { - tween.elem[ tween.prop ] = tween.now; - } - } -}; - -jQuery.easing = { - linear: function( p ) { - return p; - }, - swing: function( p ) { - return 0.5 - Math.cos( p * Math.PI ) / 2; - }, - _default: "swing" -}; - -jQuery.fx = Tween.prototype.init; - -// Back compat <1.8 extension point -jQuery.fx.step = {}; - - - - -var - fxNow, inProgress, - rfxtypes = /^(?:toggle|show|hide)$/, - rrun = /queueHooks$/; - -function schedule() { - if ( inProgress ) { - if ( document.hidden === false && window.requestAnimationFrame ) { - window.requestAnimationFrame( schedule ); - } else { - window.setTimeout( schedule, jQuery.fx.interval ); - } - - jQuery.fx.tick(); - } -} - -// Animations created synchronously will run synchronously -function createFxNow() { - window.setTimeout( function() { - fxNow = undefined; - } ); - return ( fxNow = Date.now() ); -} - -// Generate parameters to create a standard animation -function genFx( type, includeWidth ) { - var which, - i = 0, - attrs = { height: type }; - - // If we include width, step value is 1 to do all cssExpand values, - // otherwise step value is 2 to skip over Left and Right - includeWidth = includeWidth ? 1 : 0; - for ( ; i < 4; i += 2 - includeWidth ) { - which = cssExpand[ i ]; - attrs[ "margin" + which ] = attrs[ "padding" + which ] = type; - } - - if ( includeWidth ) { - attrs.opacity = attrs.width = type; - } - - return attrs; -} - -function createTween( value, prop, animation ) { - var tween, - collection = ( Animation.tweeners[ prop ] || [] ).concat( Animation.tweeners[ "*" ] ), - index = 0, - length = collection.length; - for ( ; index < length; index++ ) { - if ( ( tween = collection[ index ].call( animation, prop, value ) ) ) { - - // We're done with this property - return tween; - } - } -} - -function defaultPrefilter( elem, props, opts ) { - var prop, value, toggle, hooks, oldfire, propTween, restoreDisplay, display, - isBox = "width" in props || "height" in props, - anim = this, - orig = {}, - style = elem.style, - hidden = elem.nodeType && isHiddenWithinTree( elem ), - dataShow = dataPriv.get( elem, "fxshow" ); - - // Queue-skipping animations hijack the fx hooks - if ( !opts.queue ) { - hooks = jQuery._queueHooks( elem, "fx" ); - if ( hooks.unqueued == null ) { - hooks.unqueued = 0; - oldfire = hooks.empty.fire; - hooks.empty.fire = function() { - if ( !hooks.unqueued ) { - oldfire(); - } - }; - } - hooks.unqueued++; - - anim.always( function() { - - // Ensure the complete handler is called before this completes - anim.always( function() { - hooks.unqueued--; - if ( !jQuery.queue( elem, "fx" ).length ) { - hooks.empty.fire(); - } - } ); - } ); - } - - // Detect show/hide animations - for ( prop in props ) { - value = props[ prop ]; - if ( rfxtypes.test( value ) ) { - delete props[ prop ]; - toggle = toggle || value === "toggle"; - if ( value === ( hidden ? "hide" : "show" ) ) { - - // Pretend to be hidden if this is a "show" and - // there is still data from a stopped show/hide - if ( value === "show" && dataShow && dataShow[ prop ] !== undefined ) { - hidden = true; - - // Ignore all other no-op show/hide data - } else { - continue; - } - } - orig[ prop ] = dataShow && dataShow[ prop ] || jQuery.style( elem, prop ); - } - } - - // Bail out if this is a no-op like .hide().hide() - propTween = !jQuery.isEmptyObject( props ); - if ( !propTween && jQuery.isEmptyObject( orig ) ) { - return; - } - - // Restrict "overflow" and "display" styles during box animations - if ( isBox && elem.nodeType === 1 ) { - - // Support: IE <=9 - 11, Edge 12 - 15 - // Record all 3 overflow attributes because IE does not infer the shorthand - // from identically-valued overflowX and overflowY and Edge just mirrors - // the overflowX value there. - opts.overflow = [ style.overflow, style.overflowX, style.overflowY ]; - - // Identify a display type, preferring old show/hide data over the CSS cascade - restoreDisplay = dataShow && dataShow.display; - if ( restoreDisplay == null ) { - restoreDisplay = dataPriv.get( elem, "display" ); - } - display = jQuery.css( elem, "display" ); - if ( display === "none" ) { - if ( restoreDisplay ) { - display = restoreDisplay; - } else { - - // Get nonempty value(s) by temporarily forcing visibility - showHide( [ elem ], true ); - restoreDisplay = elem.style.display || restoreDisplay; - display = jQuery.css( elem, "display" ); - showHide( [ elem ] ); - } - } - - // Animate inline elements as inline-block - if ( display === "inline" || display === "inline-block" && restoreDisplay != null ) { - if ( jQuery.css( elem, "float" ) === "none" ) { - - // Restore the original display value at the end of pure show/hide animations - if ( !propTween ) { - anim.done( function() { - style.display = restoreDisplay; - } ); - if ( restoreDisplay == null ) { - display = style.display; - restoreDisplay = display === "none" ? "" : display; - } - } - style.display = "inline-block"; - } - } - } - - if ( opts.overflow ) { - style.overflow = "hidden"; - anim.always( function() { - style.overflow = opts.overflow[ 0 ]; - style.overflowX = opts.overflow[ 1 ]; - style.overflowY = opts.overflow[ 2 ]; - } ); - } - - // Implement show/hide animations - propTween = false; - for ( prop in orig ) { - - // General show/hide setup for this element animation - if ( !propTween ) { - if ( dataShow ) { - if ( "hidden" in dataShow ) { - hidden = dataShow.hidden; - } - } else { - dataShow = dataPriv.access( elem, "fxshow", { display: restoreDisplay } ); - } - - // Store hidden/visible for toggle so `.stop().toggle()` "reverses" - if ( toggle ) { - dataShow.hidden = !hidden; - } - - // Show elements before animating them - if ( hidden ) { - showHide( [ elem ], true ); - } - - /* eslint-disable no-loop-func */ - - anim.done( function() { - - /* eslint-enable no-loop-func */ - - // The final step of a "hide" animation is actually hiding the element - if ( !hidden ) { - showHide( [ elem ] ); - } - dataPriv.remove( elem, "fxshow" ); - for ( prop in orig ) { - jQuery.style( elem, prop, orig[ prop ] ); - } - } ); - } - - // Per-property setup - propTween = createTween( hidden ? dataShow[ prop ] : 0, prop, anim ); - if ( !( prop in dataShow ) ) { - dataShow[ prop ] = propTween.start; - if ( hidden ) { - propTween.end = propTween.start; - propTween.start = 0; - } - } - } -} - -function propFilter( props, specialEasing ) { - var index, name, easing, value, hooks; - - // camelCase, specialEasing and expand cssHook pass - for ( index in props ) { - name = camelCase( index ); - easing = specialEasing[ name ]; - value = props[ index ]; - if ( Array.isArray( value ) ) { - easing = value[ 1 ]; - value = props[ index ] = value[ 0 ]; - } - - if ( index !== name ) { - props[ name ] = value; - delete props[ index ]; - } - - hooks = jQuery.cssHooks[ name ]; - if ( hooks && "expand" in hooks ) { - value = hooks.expand( value ); - delete props[ name ]; - - // Not quite $.extend, this won't overwrite existing keys. - // Reusing 'index' because we have the correct "name" - for ( index in value ) { - if ( !( index in props ) ) { - props[ index ] = value[ index ]; - specialEasing[ index ] = easing; - } - } - } else { - specialEasing[ name ] = easing; - } - } -} - -function Animation( elem, properties, options ) { - var result, - stopped, - index = 0, - length = Animation.prefilters.length, - deferred = jQuery.Deferred().always( function() { - - // Don't match elem in the :animated selector - delete tick.elem; - } ), - tick = function() { - if ( stopped ) { - return false; - } - var currentTime = fxNow || createFxNow(), - remaining = Math.max( 0, animation.startTime + animation.duration - currentTime ), - - // Support: Android 2.3 only - // Archaic crash bug won't allow us to use `1 - ( 0.5 || 0 )` (#12497) - temp = remaining / animation.duration || 0, - percent = 1 - temp, - index = 0, - length = animation.tweens.length; - - for ( ; index < length; index++ ) { - animation.tweens[ index ].run( percent ); - } - - deferred.notifyWith( elem, [ animation, percent, remaining ] ); - - // If there's more to do, yield - if ( percent < 1 && length ) { - return remaining; - } - - // If this was an empty animation, synthesize a final progress notification - if ( !length ) { - deferred.notifyWith( elem, [ animation, 1, 0 ] ); - } - - // Resolve the animation and report its conclusion - deferred.resolveWith( elem, [ animation ] ); - return false; - }, - animation = deferred.promise( { - elem: elem, - props: jQuery.extend( {}, properties ), - opts: jQuery.extend( true, { - specialEasing: {}, - easing: jQuery.easing._default - }, options ), - originalProperties: properties, - originalOptions: options, - startTime: fxNow || createFxNow(), - duration: options.duration, - tweens: [], - createTween: function( prop, end ) { - var tween = jQuery.Tween( elem, animation.opts, prop, end, - animation.opts.specialEasing[ prop ] || animation.opts.easing ); - animation.tweens.push( tween ); - return tween; - }, - stop: function( gotoEnd ) { - var index = 0, - - // If we are going to the end, we want to run all the tweens - // otherwise we skip this part - length = gotoEnd ? animation.tweens.length : 0; - if ( stopped ) { - return this; - } - stopped = true; - for ( ; index < length; index++ ) { - animation.tweens[ index ].run( 1 ); - } - - // Resolve when we played the last frame; otherwise, reject - if ( gotoEnd ) { - deferred.notifyWith( elem, [ animation, 1, 0 ] ); - deferred.resolveWith( elem, [ animation, gotoEnd ] ); - } else { - deferred.rejectWith( elem, [ animation, gotoEnd ] ); - } - return this; - } - } ), - props = animation.props; - - propFilter( props, animation.opts.specialEasing ); - - for ( ; index < length; index++ ) { - result = Animation.prefilters[ index ].call( animation, elem, props, animation.opts ); - if ( result ) { - if ( isFunction( result.stop ) ) { - jQuery._queueHooks( animation.elem, animation.opts.queue ).stop = - result.stop.bind( result ); - } - return result; - } - } - - jQuery.map( props, createTween, animation ); - - if ( isFunction( animation.opts.start ) ) { - animation.opts.start.call( elem, animation ); - } - - // Attach callbacks from options - animation - .progress( animation.opts.progress ) - .done( animation.opts.done, animation.opts.complete ) - .fail( animation.opts.fail ) - .always( animation.opts.always ); - - jQuery.fx.timer( - jQuery.extend( tick, { - elem: elem, - anim: animation, - queue: animation.opts.queue - } ) - ); - - return animation; -} - -jQuery.Animation = jQuery.extend( Animation, { - - tweeners: { - "*": [ function( prop, value ) { - var tween = this.createTween( prop, value ); - adjustCSS( tween.elem, prop, rcssNum.exec( value ), tween ); - return tween; - } ] - }, - - tweener: function( props, callback ) { - if ( isFunction( props ) ) { - callback = props; - props = [ "*" ]; - } else { - props = props.match( rnothtmlwhite ); - } - - var prop, - index = 0, - length = props.length; - - for ( ; index < length; index++ ) { - prop = props[ index ]; - Animation.tweeners[ prop ] = Animation.tweeners[ prop ] || []; - Animation.tweeners[ prop ].unshift( callback ); - } - }, - - prefilters: [ defaultPrefilter ], - - prefilter: function( callback, prepend ) { - if ( prepend ) { - Animation.prefilters.unshift( callback ); - } else { - Animation.prefilters.push( callback ); - } - } -} ); - -jQuery.speed = function( speed, easing, fn ) { - var opt = speed && typeof speed === "object" ? jQuery.extend( {}, speed ) : { - complete: fn || !fn && easing || - isFunction( speed ) && speed, - duration: speed, - easing: fn && easing || easing && !isFunction( easing ) && easing - }; - - // Go to the end state if fx are off - if ( jQuery.fx.off ) { - opt.duration = 0; - - } else { - if ( typeof opt.duration !== "number" ) { - if ( opt.duration in jQuery.fx.speeds ) { - opt.duration = jQuery.fx.speeds[ opt.duration ]; - - } else { - opt.duration = jQuery.fx.speeds._default; - } - } - } - - // Normalize opt.queue - true/undefined/null -> "fx" - if ( opt.queue == null || opt.queue === true ) { - opt.queue = "fx"; - } - - // Queueing - opt.old = opt.complete; - - opt.complete = function() { - if ( isFunction( opt.old ) ) { - opt.old.call( this ); - } - - if ( opt.queue ) { - jQuery.dequeue( this, opt.queue ); - } - }; - - return opt; -}; - -jQuery.fn.extend( { - fadeTo: function( speed, to, easing, callback ) { - - // Show any hidden elements after setting opacity to 0 - return this.filter( isHiddenWithinTree ).css( "opacity", 0 ).show() - - // Animate to the value specified - .end().animate( { opacity: to }, speed, easing, callback ); - }, - animate: function( prop, speed, easing, callback ) { - var empty = jQuery.isEmptyObject( prop ), - optall = jQuery.speed( speed, easing, callback ), - doAnimation = function() { - - // Operate on a copy of prop so per-property easing won't be lost - var anim = Animation( this, jQuery.extend( {}, prop ), optall ); - - // Empty animations, or finishing resolves immediately - if ( empty || dataPriv.get( this, "finish" ) ) { - anim.stop( true ); - } - }; - - doAnimation.finish = doAnimation; - - return empty || optall.queue === false ? - this.each( doAnimation ) : - this.queue( optall.queue, doAnimation ); - }, - stop: function( type, clearQueue, gotoEnd ) { - var stopQueue = function( hooks ) { - var stop = hooks.stop; - delete hooks.stop; - stop( gotoEnd ); - }; - - if ( typeof type !== "string" ) { - gotoEnd = clearQueue; - clearQueue = type; - type = undefined; - } - if ( clearQueue ) { - this.queue( type || "fx", [] ); - } - - return this.each( function() { - var dequeue = true, - index = type != null && type + "queueHooks", - timers = jQuery.timers, - data = dataPriv.get( this ); - - if ( index ) { - if ( data[ index ] && data[ index ].stop ) { - stopQueue( data[ index ] ); - } - } else { - for ( index in data ) { - if ( data[ index ] && data[ index ].stop && rrun.test( index ) ) { - stopQueue( data[ index ] ); - } - } - } - - for ( index = timers.length; index--; ) { - if ( timers[ index ].elem === this && - ( type == null || timers[ index ].queue === type ) ) { - - timers[ index ].anim.stop( gotoEnd ); - dequeue = false; - timers.splice( index, 1 ); - } - } - - // Start the next in the queue if the last step wasn't forced. - // Timers currently will call their complete callbacks, which - // will dequeue but only if they were gotoEnd. - if ( dequeue || !gotoEnd ) { - jQuery.dequeue( this, type ); - } - } ); - }, - finish: function( type ) { - if ( type !== false ) { - type = type || "fx"; - } - return this.each( function() { - var index, - data = dataPriv.get( this ), - queue = data[ type + "queue" ], - hooks = data[ type + "queueHooks" ], - timers = jQuery.timers, - length = queue ? queue.length : 0; - - // Enable finishing flag on private data - data.finish = true; - - // Empty the queue first - jQuery.queue( this, type, [] ); - - if ( hooks && hooks.stop ) { - hooks.stop.call( this, true ); - } - - // Look for any active animations, and finish them - for ( index = timers.length; index--; ) { - if ( timers[ index ].elem === this && timers[ index ].queue === type ) { - timers[ index ].anim.stop( true ); - timers.splice( index, 1 ); - } - } - - // Look for any animations in the old queue and finish them - for ( index = 0; index < length; index++ ) { - if ( queue[ index ] && queue[ index ].finish ) { - queue[ index ].finish.call( this ); - } - } - - // Turn off finishing flag - delete data.finish; - } ); - } -} ); - -jQuery.each( [ "toggle", "show", "hide" ], function( _i, name ) { - var cssFn = jQuery.fn[ name ]; - jQuery.fn[ name ] = function( speed, easing, callback ) { - return speed == null || typeof speed === "boolean" ? - cssFn.apply( this, arguments ) : - this.animate( genFx( name, true ), speed, easing, callback ); - }; -} ); - -// Generate shortcuts for custom animations -jQuery.each( { - slideDown: genFx( "show" ), - slideUp: genFx( "hide" ), - slideToggle: genFx( "toggle" ), - fadeIn: { opacity: "show" }, - fadeOut: { opacity: "hide" }, - fadeToggle: { opacity: "toggle" } -}, function( name, props ) { - jQuery.fn[ name ] = function( speed, easing, callback ) { - return this.animate( props, speed, easing, callback ); - }; -} ); - -jQuery.timers = []; -jQuery.fx.tick = function() { - var timer, - i = 0, - timers = jQuery.timers; - - fxNow = Date.now(); - - for ( ; i < timers.length; i++ ) { - timer = timers[ i ]; - - // Run the timer and safely remove it when done (allowing for external removal) - if ( !timer() && timers[ i ] === timer ) { - timers.splice( i--, 1 ); - } - } - - if ( !timers.length ) { - jQuery.fx.stop(); - } - fxNow = undefined; -}; - -jQuery.fx.timer = function( timer ) { - jQuery.timers.push( timer ); - jQuery.fx.start(); -}; - -jQuery.fx.interval = 13; -jQuery.fx.start = function() { - if ( inProgress ) { - return; - } - - inProgress = true; - schedule(); -}; - -jQuery.fx.stop = function() { - inProgress = null; -}; - -jQuery.fx.speeds = { - slow: 600, - fast: 200, - - // Default speed - _default: 400 -}; - - -// Based off of the plugin by Clint Helfers, with permission. -// https://web.archive.org/web/20100324014747/http://blindsignals.com/index.php/2009/07/jquery-delay/ -jQuery.fn.delay = function( time, type ) { - time = jQuery.fx ? jQuery.fx.speeds[ time ] || time : time; - type = type || "fx"; - - return this.queue( type, function( next, hooks ) { - var timeout = window.setTimeout( next, time ); - hooks.stop = function() { - window.clearTimeout( timeout ); - }; - } ); -}; - - -( function() { - var input = document.createElement( "input" ), - select = document.createElement( "select" ), - opt = select.appendChild( document.createElement( "option" ) ); - - input.type = "checkbox"; - - // Support: Android <=4.3 only - // Default value for a checkbox should be "on" - support.checkOn = input.value !== ""; - - // Support: IE <=11 only - // Must access selectedIndex to make default options select - support.optSelected = opt.selected; - - // Support: IE <=11 only - // An input loses its value after becoming a radio - input = document.createElement( "input" ); - input.value = "t"; - input.type = "radio"; - support.radioValue = input.value === "t"; -} )(); - - -var boolHook, - attrHandle = jQuery.expr.attrHandle; - -jQuery.fn.extend( { - attr: function( name, value ) { - return access( this, jQuery.attr, name, value, arguments.length > 1 ); - }, - - removeAttr: function( name ) { - return this.each( function() { - jQuery.removeAttr( this, name ); - } ); - } -} ); - -jQuery.extend( { - attr: function( elem, name, value ) { - var ret, hooks, - nType = elem.nodeType; - - // Don't get/set attributes on text, comment and attribute nodes - if ( nType === 3 || nType === 8 || nType === 2 ) { - return; - } - - // Fallback to prop when attributes are not supported - if ( typeof elem.getAttribute === "undefined" ) { - return jQuery.prop( elem, name, value ); - } - - // Attribute hooks are determined by the lowercase version - // Grab necessary hook if one is defined - if ( nType !== 1 || !jQuery.isXMLDoc( elem ) ) { - hooks = jQuery.attrHooks[ name.toLowerCase() ] || - ( jQuery.expr.match.bool.test( name ) ? boolHook : undefined ); - } - - if ( value !== undefined ) { - if ( value === null ) { - jQuery.removeAttr( elem, name ); - return; - } - - if ( hooks && "set" in hooks && - ( ret = hooks.set( elem, value, name ) ) !== undefined ) { - return ret; - } - - elem.setAttribute( name, value + "" ); - return value; - } - - if ( hooks && "get" in hooks && ( ret = hooks.get( elem, name ) ) !== null ) { - return ret; - } - - ret = jQuery.find.attr( elem, name ); - - // Non-existent attributes return null, we normalize to undefined - return ret == null ? undefined : ret; - }, - - attrHooks: { - type: { - set: function( elem, value ) { - if ( !support.radioValue && value === "radio" && - nodeName( elem, "input" ) ) { - var val = elem.value; - elem.setAttribute( "type", value ); - if ( val ) { - elem.value = val; - } - return value; - } - } - } - }, - - removeAttr: function( elem, value ) { - var name, - i = 0, - - // Attribute names can contain non-HTML whitespace characters - // https://html.spec.whatwg.org/multipage/syntax.html#attributes-2 - attrNames = value && value.match( rnothtmlwhite ); - - if ( attrNames && elem.nodeType === 1 ) { - while ( ( name = attrNames[ i++ ] ) ) { - elem.removeAttribute( name ); - } - } - } -} ); - -// Hooks for boolean attributes -boolHook = { - set: function( elem, value, name ) { - if ( value === false ) { - - // Remove boolean attributes when set to false - jQuery.removeAttr( elem, name ); - } else { - elem.setAttribute( name, name ); - } - return name; - } -}; - -jQuery.each( jQuery.expr.match.bool.source.match( /\w+/g ), function( _i, name ) { - var getter = attrHandle[ name ] || jQuery.find.attr; - - attrHandle[ name ] = function( elem, name, isXML ) { - var ret, handle, - lowercaseName = name.toLowerCase(); - - if ( !isXML ) { - - // Avoid an infinite loop by temporarily removing this function from the getter - handle = attrHandle[ lowercaseName ]; - attrHandle[ lowercaseName ] = ret; - ret = getter( elem, name, isXML ) != null ? - lowercaseName : - null; - attrHandle[ lowercaseName ] = handle; - } - return ret; - }; -} ); - - - - -var rfocusable = /^(?:input|select|textarea|button)$/i, - rclickable = /^(?:a|area)$/i; - -jQuery.fn.extend( { - prop: function( name, value ) { - return access( this, jQuery.prop, name, value, arguments.length > 1 ); - }, - - removeProp: function( name ) { - return this.each( function() { - delete this[ jQuery.propFix[ name ] || name ]; - } ); - } -} ); - -jQuery.extend( { - prop: function( elem, name, value ) { - var ret, hooks, - nType = elem.nodeType; - - // Don't get/set properties on text, comment and attribute nodes - if ( nType === 3 || nType === 8 || nType === 2 ) { - return; - } - - if ( nType !== 1 || !jQuery.isXMLDoc( elem ) ) { - - // Fix name and attach hooks - name = jQuery.propFix[ name ] || name; - hooks = jQuery.propHooks[ name ]; - } - - if ( value !== undefined ) { - if ( hooks && "set" in hooks && - ( ret = hooks.set( elem, value, name ) ) !== undefined ) { - return ret; - } - - return ( elem[ name ] = value ); - } - - if ( hooks && "get" in hooks && ( ret = hooks.get( elem, name ) ) !== null ) { - return ret; - } - - return elem[ name ]; - }, - - propHooks: { - tabIndex: { - get: function( elem ) { - - // Support: IE <=9 - 11 only - // elem.tabIndex doesn't always return the - // correct value when it hasn't been explicitly set - // https://web.archive.org/web/20141116233347/http://fluidproject.org/blog/2008/01/09/getting-setting-and-removing-tabindex-values-with-javascript/ - // Use proper attribute retrieval(#12072) - var tabindex = jQuery.find.attr( elem, "tabindex" ); - - if ( tabindex ) { - return parseInt( tabindex, 10 ); - } - - if ( - rfocusable.test( elem.nodeName ) || - rclickable.test( elem.nodeName ) && - elem.href - ) { - return 0; - } - - return -1; - } - } - }, - - propFix: { - "for": "htmlFor", - "class": "className" - } -} ); - -// Support: IE <=11 only -// Accessing the selectedIndex property -// forces the browser to respect setting selected -// on the option -// The getter ensures a default option is selected -// when in an optgroup -// eslint rule "no-unused-expressions" is disabled for this code -// since it considers such accessions noop -if ( !support.optSelected ) { - jQuery.propHooks.selected = { - get: function( elem ) { - - /* eslint no-unused-expressions: "off" */ - - var parent = elem.parentNode; - if ( parent && parent.parentNode ) { - parent.parentNode.selectedIndex; - } - return null; - }, - set: function( elem ) { - - /* eslint no-unused-expressions: "off" */ - - var parent = elem.parentNode; - if ( parent ) { - parent.selectedIndex; - - if ( parent.parentNode ) { - parent.parentNode.selectedIndex; - } - } - } - }; -} - -jQuery.each( [ - "tabIndex", - "readOnly", - "maxLength", - "cellSpacing", - "cellPadding", - "rowSpan", - "colSpan", - "useMap", - "frameBorder", - "contentEditable" -], function() { - jQuery.propFix[ this.toLowerCase() ] = this; -} ); - - - - - // Strip and collapse whitespace according to HTML spec - // https://infra.spec.whatwg.org/#strip-and-collapse-ascii-whitespace - function stripAndCollapse( value ) { - var tokens = value.match( rnothtmlwhite ) || []; - return tokens.join( " " ); - } - - -function getClass( elem ) { - return elem.getAttribute && elem.getAttribute( "class" ) || ""; -} - -function classesToArray( value ) { - if ( Array.isArray( value ) ) { - return value; - } - if ( typeof value === "string" ) { - return value.match( rnothtmlwhite ) || []; - } - return []; -} - -jQuery.fn.extend( { - addClass: function( value ) { - var classes, elem, cur, curValue, clazz, j, finalValue, - i = 0; - - if ( isFunction( value ) ) { - return this.each( function( j ) { - jQuery( this ).addClass( value.call( this, j, getClass( this ) ) ); - } ); - } - - classes = classesToArray( value ); - - if ( classes.length ) { - while ( ( elem = this[ i++ ] ) ) { - curValue = getClass( elem ); - cur = elem.nodeType === 1 && ( " " + stripAndCollapse( curValue ) + " " ); - - if ( cur ) { - j = 0; - while ( ( clazz = classes[ j++ ] ) ) { - if ( cur.indexOf( " " + clazz + " " ) < 0 ) { - cur += clazz + " "; - } - } - - // Only assign if different to avoid unneeded rendering. - finalValue = stripAndCollapse( cur ); - if ( curValue !== finalValue ) { - elem.setAttribute( "class", finalValue ); - } - } - } - } - - return this; - }, - - removeClass: function( value ) { - var classes, elem, cur, curValue, clazz, j, finalValue, - i = 0; - - if ( isFunction( value ) ) { - return this.each( function( j ) { - jQuery( this ).removeClass( value.call( this, j, getClass( this ) ) ); - } ); - } - - if ( !arguments.length ) { - return this.attr( "class", "" ); - } - - classes = classesToArray( value ); - - if ( classes.length ) { - while ( ( elem = this[ i++ ] ) ) { - curValue = getClass( elem ); - - // This expression is here for better compressibility (see addClass) - cur = elem.nodeType === 1 && ( " " + stripAndCollapse( curValue ) + " " ); - - if ( cur ) { - j = 0; - while ( ( clazz = classes[ j++ ] ) ) { - - // Remove *all* instances - while ( cur.indexOf( " " + clazz + " " ) > -1 ) { - cur = cur.replace( " " + clazz + " ", " " ); - } - } - - // Only assign if different to avoid unneeded rendering. - finalValue = stripAndCollapse( cur ); - if ( curValue !== finalValue ) { - elem.setAttribute( "class", finalValue ); - } - } - } - } - - return this; - }, - - toggleClass: function( value, stateVal ) { - var type = typeof value, - isValidValue = type === "string" || Array.isArray( value ); - - if ( typeof stateVal === "boolean" && isValidValue ) { - return stateVal ? this.addClass( value ) : this.removeClass( value ); - } - - if ( isFunction( value ) ) { - return this.each( function( i ) { - jQuery( this ).toggleClass( - value.call( this, i, getClass( this ), stateVal ), - stateVal - ); - } ); - } - - return this.each( function() { - var className, i, self, classNames; - - if ( isValidValue ) { - - // Toggle individual class names - i = 0; - self = jQuery( this ); - classNames = classesToArray( value ); - - while ( ( className = classNames[ i++ ] ) ) { - - // Check each className given, space separated list - if ( self.hasClass( className ) ) { - self.removeClass( className ); - } else { - self.addClass( className ); - } - } - - // Toggle whole class name - } else if ( value === undefined || type === "boolean" ) { - className = getClass( this ); - if ( className ) { - - // Store className if set - dataPriv.set( this, "__className__", className ); - } - - // If the element has a class name or if we're passed `false`, - // then remove the whole classname (if there was one, the above saved it). - // Otherwise bring back whatever was previously saved (if anything), - // falling back to the empty string if nothing was stored. - if ( this.setAttribute ) { - this.setAttribute( "class", - className || value === false ? - "" : - dataPriv.get( this, "__className__" ) || "" - ); - } - } - } ); - }, - - hasClass: function( selector ) { - var className, elem, - i = 0; - - className = " " + selector + " "; - while ( ( elem = this[ i++ ] ) ) { - if ( elem.nodeType === 1 && - ( " " + stripAndCollapse( getClass( elem ) ) + " " ).indexOf( className ) > -1 ) { - return true; - } - } - - return false; - } -} ); - - - - -var rreturn = /\r/g; - -jQuery.fn.extend( { - val: function( value ) { - var hooks, ret, valueIsFunction, - elem = this[ 0 ]; - - if ( !arguments.length ) { - if ( elem ) { - hooks = jQuery.valHooks[ elem.type ] || - jQuery.valHooks[ elem.nodeName.toLowerCase() ]; - - if ( hooks && - "get" in hooks && - ( ret = hooks.get( elem, "value" ) ) !== undefined - ) { - return ret; - } - - ret = elem.value; - - // Handle most common string cases - if ( typeof ret === "string" ) { - return ret.replace( rreturn, "" ); - } - - // Handle cases where value is null/undef or number - return ret == null ? "" : ret; - } - - return; - } - - valueIsFunction = isFunction( value ); - - return this.each( function( i ) { - var val; - - if ( this.nodeType !== 1 ) { - return; - } - - if ( valueIsFunction ) { - val = value.call( this, i, jQuery( this ).val() ); - } else { - val = value; - } - - // Treat null/undefined as ""; convert numbers to string - if ( val == null ) { - val = ""; - - } else if ( typeof val === "number" ) { - val += ""; - - } else if ( Array.isArray( val ) ) { - val = jQuery.map( val, function( value ) { - return value == null ? "" : value + ""; - } ); - } - - hooks = jQuery.valHooks[ this.type ] || jQuery.valHooks[ this.nodeName.toLowerCase() ]; - - // If set returns undefined, fall back to normal setting - if ( !hooks || !( "set" in hooks ) || hooks.set( this, val, "value" ) === undefined ) { - this.value = val; - } - } ); - } -} ); - -jQuery.extend( { - valHooks: { - option: { - get: function( elem ) { - - var val = jQuery.find.attr( elem, "value" ); - return val != null ? - val : - - // Support: IE <=10 - 11 only - // option.text throws exceptions (#14686, #14858) - // Strip and collapse whitespace - // https://html.spec.whatwg.org/#strip-and-collapse-whitespace - stripAndCollapse( jQuery.text( elem ) ); - } - }, - select: { - get: function( elem ) { - var value, option, i, - options = elem.options, - index = elem.selectedIndex, - one = elem.type === "select-one", - values = one ? null : [], - max = one ? index + 1 : options.length; - - if ( index < 0 ) { - i = max; - - } else { - i = one ? index : 0; - } - - // Loop through all the selected options - for ( ; i < max; i++ ) { - option = options[ i ]; - - // Support: IE <=9 only - // IE8-9 doesn't update selected after form reset (#2551) - if ( ( option.selected || i === index ) && - - // Don't return options that are disabled or in a disabled optgroup - !option.disabled && - ( !option.parentNode.disabled || - !nodeName( option.parentNode, "optgroup" ) ) ) { - - // Get the specific value for the option - value = jQuery( option ).val(); - - // We don't need an array for one selects - if ( one ) { - return value; - } - - // Multi-Selects return an array - values.push( value ); - } - } - - return values; - }, - - set: function( elem, value ) { - var optionSet, option, - options = elem.options, - values = jQuery.makeArray( value ), - i = options.length; - - while ( i-- ) { - option = options[ i ]; - - /* eslint-disable no-cond-assign */ - - if ( option.selected = - jQuery.inArray( jQuery.valHooks.option.get( option ), values ) > -1 - ) { - optionSet = true; - } - - /* eslint-enable no-cond-assign */ - } - - // Force browsers to behave consistently when non-matching value is set - if ( !optionSet ) { - elem.selectedIndex = -1; - } - return values; - } - } - } -} ); - -// Radios and checkboxes getter/setter -jQuery.each( [ "radio", "checkbox" ], function() { - jQuery.valHooks[ this ] = { - set: function( elem, value ) { - if ( Array.isArray( value ) ) { - return ( elem.checked = jQuery.inArray( jQuery( elem ).val(), value ) > -1 ); - } - } - }; - if ( !support.checkOn ) { - jQuery.valHooks[ this ].get = function( elem ) { - return elem.getAttribute( "value" ) === null ? "on" : elem.value; - }; - } -} ); - - - - -// Return jQuery for attributes-only inclusion - - -support.focusin = "onfocusin" in window; - - -var rfocusMorph = /^(?:focusinfocus|focusoutblur)$/, - stopPropagationCallback = function( e ) { - e.stopPropagation(); - }; - -jQuery.extend( jQuery.event, { - - trigger: function( event, data, elem, onlyHandlers ) { - - var i, cur, tmp, bubbleType, ontype, handle, special, lastElement, - eventPath = [ elem || document ], - type = hasOwn.call( event, "type" ) ? event.type : event, - namespaces = hasOwn.call( event, "namespace" ) ? event.namespace.split( "." ) : []; - - cur = lastElement = tmp = elem = elem || document; - - // Don't do events on text and comment nodes - if ( elem.nodeType === 3 || elem.nodeType === 8 ) { - return; - } - - // focus/blur morphs to focusin/out; ensure we're not firing them right now - if ( rfocusMorph.test( type + jQuery.event.triggered ) ) { - return; - } - - if ( type.indexOf( "." ) > -1 ) { - - // Namespaced trigger; create a regexp to match event type in handle() - namespaces = type.split( "." ); - type = namespaces.shift(); - namespaces.sort(); - } - ontype = type.indexOf( ":" ) < 0 && "on" + type; - - // Caller can pass in a jQuery.Event object, Object, or just an event type string - event = event[ jQuery.expando ] ? - event : - new jQuery.Event( type, typeof event === "object" && event ); - - // Trigger bitmask: & 1 for native handlers; & 2 for jQuery (always true) - event.isTrigger = onlyHandlers ? 2 : 3; - event.namespace = namespaces.join( "." ); - event.rnamespace = event.namespace ? - new RegExp( "(^|\\.)" + namespaces.join( "\\.(?:.*\\.|)" ) + "(\\.|$)" ) : - null; - - // Clean up the event in case it is being reused - event.result = undefined; - if ( !event.target ) { - event.target = elem; - } - - // Clone any incoming data and prepend the event, creating the handler arg list - data = data == null ? - [ event ] : - jQuery.makeArray( data, [ event ] ); - - // Allow special events to draw outside the lines - special = jQuery.event.special[ type ] || {}; - if ( !onlyHandlers && special.trigger && special.trigger.apply( elem, data ) === false ) { - return; - } - - // Determine event propagation path in advance, per W3C events spec (#9951) - // Bubble up to document, then to window; watch for a global ownerDocument var (#9724) - if ( !onlyHandlers && !special.noBubble && !isWindow( elem ) ) { - - bubbleType = special.delegateType || type; - if ( !rfocusMorph.test( bubbleType + type ) ) { - cur = cur.parentNode; - } - for ( ; cur; cur = cur.parentNode ) { - eventPath.push( cur ); - tmp = cur; - } - - // Only add window if we got to document (e.g., not plain obj or detached DOM) - if ( tmp === ( elem.ownerDocument || document ) ) { - eventPath.push( tmp.defaultView || tmp.parentWindow || window ); - } - } - - // Fire handlers on the event path - i = 0; - while ( ( cur = eventPath[ i++ ] ) && !event.isPropagationStopped() ) { - lastElement = cur; - event.type = i > 1 ? - bubbleType : - special.bindType || type; - - // jQuery handler - handle = ( dataPriv.get( cur, "events" ) || Object.create( null ) )[ event.type ] && - dataPriv.get( cur, "handle" ); - if ( handle ) { - handle.apply( cur, data ); - } - - // Native handler - handle = ontype && cur[ ontype ]; - if ( handle && handle.apply && acceptData( cur ) ) { - event.result = handle.apply( cur, data ); - if ( event.result === false ) { - event.preventDefault(); - } - } - } - event.type = type; - - // If nobody prevented the default action, do it now - if ( !onlyHandlers && !event.isDefaultPrevented() ) { - - if ( ( !special._default || - special._default.apply( eventPath.pop(), data ) === false ) && - acceptData( elem ) ) { - - // Call a native DOM method on the target with the same name as the event. - // Don't do default actions on window, that's where global variables be (#6170) - if ( ontype && isFunction( elem[ type ] ) && !isWindow( elem ) ) { - - // Don't re-trigger an onFOO event when we call its FOO() method - tmp = elem[ ontype ]; - - if ( tmp ) { - elem[ ontype ] = null; - } - - // Prevent re-triggering of the same event, since we already bubbled it above - jQuery.event.triggered = type; - - if ( event.isPropagationStopped() ) { - lastElement.addEventListener( type, stopPropagationCallback ); - } - - elem[ type ](); - - if ( event.isPropagationStopped() ) { - lastElement.removeEventListener( type, stopPropagationCallback ); - } - - jQuery.event.triggered = undefined; - - if ( tmp ) { - elem[ ontype ] = tmp; - } - } - } - } - - return event.result; - }, - - // Piggyback on a donor event to simulate a different one - // Used only for `focus(in | out)` events - simulate: function( type, elem, event ) { - var e = jQuery.extend( - new jQuery.Event(), - event, - { - type: type, - isSimulated: true - } - ); - - jQuery.event.trigger( e, null, elem ); - } - -} ); - -jQuery.fn.extend( { - - trigger: function( type, data ) { - return this.each( function() { - jQuery.event.trigger( type, data, this ); - } ); - }, - triggerHandler: function( type, data ) { - var elem = this[ 0 ]; - if ( elem ) { - return jQuery.event.trigger( type, data, elem, true ); - } - } -} ); - - -// Support: Firefox <=44 -// Firefox doesn't have focus(in | out) events -// Related ticket - https://bugzilla.mozilla.org/show_bug.cgi?id=687787 -// -// Support: Chrome <=48 - 49, Safari <=9.0 - 9.1 -// focus(in | out) events fire after focus & blur events, -// which is spec violation - http://www.w3.org/TR/DOM-Level-3-Events/#events-focusevent-event-order -// Related ticket - https://bugs.chromium.org/p/chromium/issues/detail?id=449857 -if ( !support.focusin ) { - jQuery.each( { focus: "focusin", blur: "focusout" }, function( orig, fix ) { - - // Attach a single capturing handler on the document while someone wants focusin/focusout - var handler = function( event ) { - jQuery.event.simulate( fix, event.target, jQuery.event.fix( event ) ); - }; - - jQuery.event.special[ fix ] = { - setup: function() { - - // Handle: regular nodes (via `this.ownerDocument`), window - // (via `this.document`) & document (via `this`). - var doc = this.ownerDocument || this.document || this, - attaches = dataPriv.access( doc, fix ); - - if ( !attaches ) { - doc.addEventListener( orig, handler, true ); - } - dataPriv.access( doc, fix, ( attaches || 0 ) + 1 ); - }, - teardown: function() { - var doc = this.ownerDocument || this.document || this, - attaches = dataPriv.access( doc, fix ) - 1; - - if ( !attaches ) { - doc.removeEventListener( orig, handler, true ); - dataPriv.remove( doc, fix ); - - } else { - dataPriv.access( doc, fix, attaches ); - } - } - }; - } ); -} -var location = window.location; - -var nonce = { guid: Date.now() }; - -var rquery = ( /\?/ ); - - - -// Cross-browser xml parsing -jQuery.parseXML = function( data ) { - var xml, parserErrorElem; - if ( !data || typeof data !== "string" ) { - return null; - } - - // Support: IE 9 - 11 only - // IE throws on parseFromString with invalid input. - try { - xml = ( new window.DOMParser() ).parseFromString( data, "text/xml" ); - } catch ( e ) {} - - parserErrorElem = xml && xml.getElementsByTagName( "parsererror" )[ 0 ]; - if ( !xml || parserErrorElem ) { - jQuery.error( "Invalid XML: " + ( - parserErrorElem ? - jQuery.map( parserErrorElem.childNodes, function( el ) { - return el.textContent; - } ).join( "\n" ) : - data - ) ); - } - return xml; -}; - - -var - rbracket = /\[\]$/, - rCRLF = /\r?\n/g, - rsubmitterTypes = /^(?:submit|button|image|reset|file)$/i, - rsubmittable = /^(?:input|select|textarea|keygen)/i; - -function buildParams( prefix, obj, traditional, add ) { - var name; - - if ( Array.isArray( obj ) ) { - - // Serialize array item. - jQuery.each( obj, function( i, v ) { - if ( traditional || rbracket.test( prefix ) ) { - - // Treat each array item as a scalar. - add( prefix, v ); - - } else { - - // Item is non-scalar (array or object), encode its numeric index. - buildParams( - prefix + "[" + ( typeof v === "object" && v != null ? i : "" ) + "]", - v, - traditional, - add - ); - } - } ); - - } else if ( !traditional && toType( obj ) === "object" ) { - - // Serialize object item. - for ( name in obj ) { - buildParams( prefix + "[" + name + "]", obj[ name ], traditional, add ); - } - - } else { - - // Serialize scalar item. - add( prefix, obj ); - } -} - -// Serialize an array of form elements or a set of -// key/values into a query string -jQuery.param = function( a, traditional ) { - var prefix, - s = [], - add = function( key, valueOrFunction ) { - - // If value is a function, invoke it and use its return value - var value = isFunction( valueOrFunction ) ? - valueOrFunction() : - valueOrFunction; - - s[ s.length ] = encodeURIComponent( key ) + "=" + - encodeURIComponent( value == null ? "" : value ); - }; - - if ( a == null ) { - return ""; - } - - // If an array was passed in, assume that it is an array of form elements. - if ( Array.isArray( a ) || ( a.jquery && !jQuery.isPlainObject( a ) ) ) { - - // Serialize the form elements - jQuery.each( a, function() { - add( this.name, this.value ); - } ); - - } else { - - // If traditional, encode the "old" way (the way 1.3.2 or older - // did it), otherwise encode params recursively. - for ( prefix in a ) { - buildParams( prefix, a[ prefix ], traditional, add ); - } - } - - // Return the resulting serialization - return s.join( "&" ); -}; - -jQuery.fn.extend( { - serialize: function() { - return jQuery.param( this.serializeArray() ); - }, - serializeArray: function() { - return this.map( function() { - - // Can add propHook for "elements" to filter or add form elements - var elements = jQuery.prop( this, "elements" ); - return elements ? jQuery.makeArray( elements ) : this; - } ).filter( function() { - var type = this.type; - - // Use .is( ":disabled" ) so that fieldset[disabled] works - return this.name && !jQuery( this ).is( ":disabled" ) && - rsubmittable.test( this.nodeName ) && !rsubmitterTypes.test( type ) && - ( this.checked || !rcheckableType.test( type ) ); - } ).map( function( _i, elem ) { - var val = jQuery( this ).val(); - - if ( val == null ) { - return null; - } - - if ( Array.isArray( val ) ) { - return jQuery.map( val, function( val ) { - return { name: elem.name, value: val.replace( rCRLF, "\r\n" ) }; - } ); - } - - return { name: elem.name, value: val.replace( rCRLF, "\r\n" ) }; - } ).get(); - } -} ); - - -var - r20 = /%20/g, - rhash = /#.*$/, - rantiCache = /([?&])_=[^&]*/, - rheaders = /^(.*?):[ \t]*([^\r\n]*)$/mg, - - // #7653, #8125, #8152: local protocol detection - rlocalProtocol = /^(?:about|app|app-storage|.+-extension|file|res|widget):$/, - rnoContent = /^(?:GET|HEAD)$/, - rprotocol = /^\/\//, - - /* Prefilters - * 1) They are useful to introduce custom dataTypes (see ajax/jsonp.js for an example) - * 2) These are called: - * - BEFORE asking for a transport - * - AFTER param serialization (s.data is a string if s.processData is true) - * 3) key is the dataType - * 4) the catchall symbol "*" can be used - * 5) execution will start with transport dataType and THEN continue down to "*" if needed - */ - prefilters = {}, - - /* Transports bindings - * 1) key is the dataType - * 2) the catchall symbol "*" can be used - * 3) selection will start with transport dataType and THEN go to "*" if needed - */ - transports = {}, - - // Avoid comment-prolog char sequence (#10098); must appease lint and evade compression - allTypes = "*/".concat( "*" ), - - // Anchor tag for parsing the document origin - originAnchor = document.createElement( "a" ); - -originAnchor.href = location.href; - -// Base "constructor" for jQuery.ajaxPrefilter and jQuery.ajaxTransport -function addToPrefiltersOrTransports( structure ) { - - // dataTypeExpression is optional and defaults to "*" - return function( dataTypeExpression, func ) { - - if ( typeof dataTypeExpression !== "string" ) { - func = dataTypeExpression; - dataTypeExpression = "*"; - } - - var dataType, - i = 0, - dataTypes = dataTypeExpression.toLowerCase().match( rnothtmlwhite ) || []; - - if ( isFunction( func ) ) { - - // For each dataType in the dataTypeExpression - while ( ( dataType = dataTypes[ i++ ] ) ) { - - // Prepend if requested - if ( dataType[ 0 ] === "+" ) { - dataType = dataType.slice( 1 ) || "*"; - ( structure[ dataType ] = structure[ dataType ] || [] ).unshift( func ); - - // Otherwise append - } else { - ( structure[ dataType ] = structure[ dataType ] || [] ).push( func ); - } - } - } - }; -} - -// Base inspection function for prefilters and transports -function inspectPrefiltersOrTransports( structure, options, originalOptions, jqXHR ) { - - var inspected = {}, - seekingTransport = ( structure === transports ); - - function inspect( dataType ) { - var selected; - inspected[ dataType ] = true; - jQuery.each( structure[ dataType ] || [], function( _, prefilterOrFactory ) { - var dataTypeOrTransport = prefilterOrFactory( options, originalOptions, jqXHR ); - if ( typeof dataTypeOrTransport === "string" && - !seekingTransport && !inspected[ dataTypeOrTransport ] ) { - - options.dataTypes.unshift( dataTypeOrTransport ); - inspect( dataTypeOrTransport ); - return false; - } else if ( seekingTransport ) { - return !( selected = dataTypeOrTransport ); - } - } ); - return selected; - } - - return inspect( options.dataTypes[ 0 ] ) || !inspected[ "*" ] && inspect( "*" ); -} - -// A special extend for ajax options -// that takes "flat" options (not to be deep extended) -// Fixes #9887 -function ajaxExtend( target, src ) { - var key, deep, - flatOptions = jQuery.ajaxSettings.flatOptions || {}; - - for ( key in src ) { - if ( src[ key ] !== undefined ) { - ( flatOptions[ key ] ? target : ( deep || ( deep = {} ) ) )[ key ] = src[ key ]; - } - } - if ( deep ) { - jQuery.extend( true, target, deep ); - } - - return target; -} - -/* Handles responses to an ajax request: - * - finds the right dataType (mediates between content-type and expected dataType) - * - returns the corresponding response - */ -function ajaxHandleResponses( s, jqXHR, responses ) { - - var ct, type, finalDataType, firstDataType, - contents = s.contents, - dataTypes = s.dataTypes; - - // Remove auto dataType and get content-type in the process - while ( dataTypes[ 0 ] === "*" ) { - dataTypes.shift(); - if ( ct === undefined ) { - ct = s.mimeType || jqXHR.getResponseHeader( "Content-Type" ); - } - } - - // Check if we're dealing with a known content-type - if ( ct ) { - for ( type in contents ) { - if ( contents[ type ] && contents[ type ].test( ct ) ) { - dataTypes.unshift( type ); - break; - } - } - } - - // Check to see if we have a response for the expected dataType - if ( dataTypes[ 0 ] in responses ) { - finalDataType = dataTypes[ 0 ]; - } else { - - // Try convertible dataTypes - for ( type in responses ) { - if ( !dataTypes[ 0 ] || s.converters[ type + " " + dataTypes[ 0 ] ] ) { - finalDataType = type; - break; - } - if ( !firstDataType ) { - firstDataType = type; - } - } - - // Or just use first one - finalDataType = finalDataType || firstDataType; - } - - // If we found a dataType - // We add the dataType to the list if needed - // and return the corresponding response - if ( finalDataType ) { - if ( finalDataType !== dataTypes[ 0 ] ) { - dataTypes.unshift( finalDataType ); - } - return responses[ finalDataType ]; - } -} - -/* Chain conversions given the request and the original response - * Also sets the responseXXX fields on the jqXHR instance - */ -function ajaxConvert( s, response, jqXHR, isSuccess ) { - var conv2, current, conv, tmp, prev, - converters = {}, - - // Work with a copy of dataTypes in case we need to modify it for conversion - dataTypes = s.dataTypes.slice(); - - // Create converters map with lowercased keys - if ( dataTypes[ 1 ] ) { - for ( conv in s.converters ) { - converters[ conv.toLowerCase() ] = s.converters[ conv ]; - } - } - - current = dataTypes.shift(); - - // Convert to each sequential dataType - while ( current ) { - - if ( s.responseFields[ current ] ) { - jqXHR[ s.responseFields[ current ] ] = response; - } - - // Apply the dataFilter if provided - if ( !prev && isSuccess && s.dataFilter ) { - response = s.dataFilter( response, s.dataType ); - } - - prev = current; - current = dataTypes.shift(); - - if ( current ) { - - // There's only work to do if current dataType is non-auto - if ( current === "*" ) { - - current = prev; - - // Convert response if prev dataType is non-auto and differs from current - } else if ( prev !== "*" && prev !== current ) { - - // Seek a direct converter - conv = converters[ prev + " " + current ] || converters[ "* " + current ]; - - // If none found, seek a pair - if ( !conv ) { - for ( conv2 in converters ) { - - // If conv2 outputs current - tmp = conv2.split( " " ); - if ( tmp[ 1 ] === current ) { - - // If prev can be converted to accepted input - conv = converters[ prev + " " + tmp[ 0 ] ] || - converters[ "* " + tmp[ 0 ] ]; - if ( conv ) { - - // Condense equivalence converters - if ( conv === true ) { - conv = converters[ conv2 ]; - - // Otherwise, insert the intermediate dataType - } else if ( converters[ conv2 ] !== true ) { - current = tmp[ 0 ]; - dataTypes.unshift( tmp[ 1 ] ); - } - break; - } - } - } - } - - // Apply converter (if not an equivalence) - if ( conv !== true ) { - - // Unless errors are allowed to bubble, catch and return them - if ( conv && s.throws ) { - response = conv( response ); - } else { - try { - response = conv( response ); - } catch ( e ) { - return { - state: "parsererror", - error: conv ? e : "No conversion from " + prev + " to " + current - }; - } - } - } - } - } - } - - return { state: "success", data: response }; -} - -jQuery.extend( { - - // Counter for holding the number of active queries - active: 0, - - // Last-Modified header cache for next request - lastModified: {}, - etag: {}, - - ajaxSettings: { - url: location.href, - type: "GET", - isLocal: rlocalProtocol.test( location.protocol ), - global: true, - processData: true, - async: true, - contentType: "application/x-www-form-urlencoded; charset=UTF-8", - - /* - timeout: 0, - data: null, - dataType: null, - username: null, - password: null, - cache: null, - throws: false, - traditional: false, - headers: {}, - */ - - accepts: { - "*": allTypes, - text: "text/plain", - html: "text/html", - xml: "application/xml, text/xml", - json: "application/json, text/javascript" - }, - - contents: { - xml: /\bxml\b/, - html: /\bhtml/, - json: /\bjson\b/ - }, - - responseFields: { - xml: "responseXML", - text: "responseText", - json: "responseJSON" - }, - - // Data converters - // Keys separate source (or catchall "*") and destination types with a single space - converters: { - - // Convert anything to text - "* text": String, - - // Text to html (true = no transformation) - "text html": true, - - // Evaluate text as a json expression - "text json": JSON.parse, - - // Parse text as xml - "text xml": jQuery.parseXML - }, - - // For options that shouldn't be deep extended: - // you can add your own custom options here if - // and when you create one that shouldn't be - // deep extended (see ajaxExtend) - flatOptions: { - url: true, - context: true - } - }, - - // Creates a full fledged settings object into target - // with both ajaxSettings and settings fields. - // If target is omitted, writes into ajaxSettings. - ajaxSetup: function( target, settings ) { - return settings ? - - // Building a settings object - ajaxExtend( ajaxExtend( target, jQuery.ajaxSettings ), settings ) : - - // Extending ajaxSettings - ajaxExtend( jQuery.ajaxSettings, target ); - }, - - ajaxPrefilter: addToPrefiltersOrTransports( prefilters ), - ajaxTransport: addToPrefiltersOrTransports( transports ), - - // Main method - ajax: function( url, options ) { - - // If url is an object, simulate pre-1.5 signature - if ( typeof url === "object" ) { - options = url; - url = undefined; - } - - // Force options to be an object - options = options || {}; - - var transport, - - // URL without anti-cache param - cacheURL, - - // Response headers - responseHeadersString, - responseHeaders, - - // timeout handle - timeoutTimer, - - // Url cleanup var - urlAnchor, - - // Request state (becomes false upon send and true upon completion) - completed, - - // To know if global events are to be dispatched - fireGlobals, - - // Loop variable - i, - - // uncached part of the url - uncached, - - // Create the final options object - s = jQuery.ajaxSetup( {}, options ), - - // Callbacks context - callbackContext = s.context || s, - - // Context for global events is callbackContext if it is a DOM node or jQuery collection - globalEventContext = s.context && - ( callbackContext.nodeType || callbackContext.jquery ) ? - jQuery( callbackContext ) : - jQuery.event, - - // Deferreds - deferred = jQuery.Deferred(), - completeDeferred = jQuery.Callbacks( "once memory" ), - - // Status-dependent callbacks - statusCode = s.statusCode || {}, - - // Headers (they are sent all at once) - requestHeaders = {}, - requestHeadersNames = {}, - - // Default abort message - strAbort = "canceled", - - // Fake xhr - jqXHR = { - readyState: 0, - - // Builds headers hashtable if needed - getResponseHeader: function( key ) { - var match; - if ( completed ) { - if ( !responseHeaders ) { - responseHeaders = {}; - while ( ( match = rheaders.exec( responseHeadersString ) ) ) { - responseHeaders[ match[ 1 ].toLowerCase() + " " ] = - ( responseHeaders[ match[ 1 ].toLowerCase() + " " ] || [] ) - .concat( match[ 2 ] ); - } - } - match = responseHeaders[ key.toLowerCase() + " " ]; - } - return match == null ? null : match.join( ", " ); - }, - - // Raw string - getAllResponseHeaders: function() { - return completed ? responseHeadersString : null; - }, - - // Caches the header - setRequestHeader: function( name, value ) { - if ( completed == null ) { - name = requestHeadersNames[ name.toLowerCase() ] = - requestHeadersNames[ name.toLowerCase() ] || name; - requestHeaders[ name ] = value; - } - return this; - }, - - // Overrides response content-type header - overrideMimeType: function( type ) { - if ( completed == null ) { - s.mimeType = type; - } - return this; - }, - - // Status-dependent callbacks - statusCode: function( map ) { - var code; - if ( map ) { - if ( completed ) { - - // Execute the appropriate callbacks - jqXHR.always( map[ jqXHR.status ] ); - } else { - - // Lazy-add the new callbacks in a way that preserves old ones - for ( code in map ) { - statusCode[ code ] = [ statusCode[ code ], map[ code ] ]; - } - } - } - return this; - }, - - // Cancel the request - abort: function( statusText ) { - var finalText = statusText || strAbort; - if ( transport ) { - transport.abort( finalText ); - } - done( 0, finalText ); - return this; - } - }; - - // Attach deferreds - deferred.promise( jqXHR ); - - // Add protocol if not provided (prefilters might expect it) - // Handle falsy url in the settings object (#10093: consistency with old signature) - // We also use the url parameter if available - s.url = ( ( url || s.url || location.href ) + "" ) - .replace( rprotocol, location.protocol + "//" ); - - // Alias method option to type as per ticket #12004 - s.type = options.method || options.type || s.method || s.type; - - // Extract dataTypes list - s.dataTypes = ( s.dataType || "*" ).toLowerCase().match( rnothtmlwhite ) || [ "" ]; - - // A cross-domain request is in order when the origin doesn't match the current origin. - if ( s.crossDomain == null ) { - urlAnchor = document.createElement( "a" ); - - // Support: IE <=8 - 11, Edge 12 - 15 - // IE throws exception on accessing the href property if url is malformed, - // e.g. http://example.com:80x/ - try { - urlAnchor.href = s.url; - - // Support: IE <=8 - 11 only - // Anchor's host property isn't correctly set when s.url is relative - urlAnchor.href = urlAnchor.href; - s.crossDomain = originAnchor.protocol + "//" + originAnchor.host !== - urlAnchor.protocol + "//" + urlAnchor.host; - } catch ( e ) { - - // If there is an error parsing the URL, assume it is crossDomain, - // it can be rejected by the transport if it is invalid - s.crossDomain = true; - } - } - - // Convert data if not already a string - if ( s.data && s.processData && typeof s.data !== "string" ) { - s.data = jQuery.param( s.data, s.traditional ); - } - - // Apply prefilters - inspectPrefiltersOrTransports( prefilters, s, options, jqXHR ); - - // If request was aborted inside a prefilter, stop there - if ( completed ) { - return jqXHR; - } - - // We can fire global events as of now if asked to - // Don't fire events if jQuery.event is undefined in an AMD-usage scenario (#15118) - fireGlobals = jQuery.event && s.global; - - // Watch for a new set of requests - if ( fireGlobals && jQuery.active++ === 0 ) { - jQuery.event.trigger( "ajaxStart" ); - } - - // Uppercase the type - s.type = s.type.toUpperCase(); - - // Determine if request has content - s.hasContent = !rnoContent.test( s.type ); - - // Save the URL in case we're toying with the If-Modified-Since - // and/or If-None-Match header later on - // Remove hash to simplify url manipulation - cacheURL = s.url.replace( rhash, "" ); - - // More options handling for requests with no content - if ( !s.hasContent ) { - - // Remember the hash so we can put it back - uncached = s.url.slice( cacheURL.length ); - - // If data is available and should be processed, append data to url - if ( s.data && ( s.processData || typeof s.data === "string" ) ) { - cacheURL += ( rquery.test( cacheURL ) ? "&" : "?" ) + s.data; - - // #9682: remove data so that it's not used in an eventual retry - delete s.data; - } - - // Add or update anti-cache param if needed - if ( s.cache === false ) { - cacheURL = cacheURL.replace( rantiCache, "$1" ); - uncached = ( rquery.test( cacheURL ) ? "&" : "?" ) + "_=" + ( nonce.guid++ ) + - uncached; - } - - // Put hash and anti-cache on the URL that will be requested (gh-1732) - s.url = cacheURL + uncached; - - // Change '%20' to '+' if this is encoded form body content (gh-2658) - } else if ( s.data && s.processData && - ( s.contentType || "" ).indexOf( "application/x-www-form-urlencoded" ) === 0 ) { - s.data = s.data.replace( r20, "+" ); - } - - // Set the If-Modified-Since and/or If-None-Match header, if in ifModified mode. - if ( s.ifModified ) { - if ( jQuery.lastModified[ cacheURL ] ) { - jqXHR.setRequestHeader( "If-Modified-Since", jQuery.lastModified[ cacheURL ] ); - } - if ( jQuery.etag[ cacheURL ] ) { - jqXHR.setRequestHeader( "If-None-Match", jQuery.etag[ cacheURL ] ); - } - } - - // Set the correct header, if data is being sent - if ( s.data && s.hasContent && s.contentType !== false || options.contentType ) { - jqXHR.setRequestHeader( "Content-Type", s.contentType ); - } - - // Set the Accepts header for the server, depending on the dataType - jqXHR.setRequestHeader( - "Accept", - s.dataTypes[ 0 ] && s.accepts[ s.dataTypes[ 0 ] ] ? - s.accepts[ s.dataTypes[ 0 ] ] + - ( s.dataTypes[ 0 ] !== "*" ? ", " + allTypes + "; q=0.01" : "" ) : - s.accepts[ "*" ] - ); - - // Check for headers option - for ( i in s.headers ) { - jqXHR.setRequestHeader( i, s.headers[ i ] ); - } - - // Allow custom headers/mimetypes and early abort - if ( s.beforeSend && - ( s.beforeSend.call( callbackContext, jqXHR, s ) === false || completed ) ) { - - // Abort if not done already and return - return jqXHR.abort(); - } - - // Aborting is no longer a cancellation - strAbort = "abort"; - - // Install callbacks on deferreds - completeDeferred.add( s.complete ); - jqXHR.done( s.success ); - jqXHR.fail( s.error ); - - // Get transport - transport = inspectPrefiltersOrTransports( transports, s, options, jqXHR ); - - // If no transport, we auto-abort - if ( !transport ) { - done( -1, "No Transport" ); - } else { - jqXHR.readyState = 1; - - // Send global event - if ( fireGlobals ) { - globalEventContext.trigger( "ajaxSend", [ jqXHR, s ] ); - } - - // If request was aborted inside ajaxSend, stop there - if ( completed ) { - return jqXHR; - } - - // Timeout - if ( s.async && s.timeout > 0 ) { - timeoutTimer = window.setTimeout( function() { - jqXHR.abort( "timeout" ); - }, s.timeout ); - } - - try { - completed = false; - transport.send( requestHeaders, done ); - } catch ( e ) { - - // Rethrow post-completion exceptions - if ( completed ) { - throw e; - } - - // Propagate others as results - done( -1, e ); - } - } - - // Callback for when everything is done - function done( status, nativeStatusText, responses, headers ) { - var isSuccess, success, error, response, modified, - statusText = nativeStatusText; - - // Ignore repeat invocations - if ( completed ) { - return; - } - - completed = true; - - // Clear timeout if it exists - if ( timeoutTimer ) { - window.clearTimeout( timeoutTimer ); - } - - // Dereference transport for early garbage collection - // (no matter how long the jqXHR object will be used) - transport = undefined; - - // Cache response headers - responseHeadersString = headers || ""; - - // Set readyState - jqXHR.readyState = status > 0 ? 4 : 0; - - // Determine if successful - isSuccess = status >= 200 && status < 300 || status === 304; - - // Get response data - if ( responses ) { - response = ajaxHandleResponses( s, jqXHR, responses ); - } - - // Use a noop converter for missing script but not if jsonp - if ( !isSuccess && - jQuery.inArray( "script", s.dataTypes ) > -1 && - jQuery.inArray( "json", s.dataTypes ) < 0 ) { - s.converters[ "text script" ] = function() {}; - } - - // Convert no matter what (that way responseXXX fields are always set) - response = ajaxConvert( s, response, jqXHR, isSuccess ); - - // If successful, handle type chaining - if ( isSuccess ) { - - // Set the If-Modified-Since and/or If-None-Match header, if in ifModified mode. - if ( s.ifModified ) { - modified = jqXHR.getResponseHeader( "Last-Modified" ); - if ( modified ) { - jQuery.lastModified[ cacheURL ] = modified; - } - modified = jqXHR.getResponseHeader( "etag" ); - if ( modified ) { - jQuery.etag[ cacheURL ] = modified; - } - } - - // if no content - if ( status === 204 || s.type === "HEAD" ) { - statusText = "nocontent"; - - // if not modified - } else if ( status === 304 ) { - statusText = "notmodified"; - - // If we have data, let's convert it - } else { - statusText = response.state; - success = response.data; - error = response.error; - isSuccess = !error; - } - } else { - - // Extract error from statusText and normalize for non-aborts - error = statusText; - if ( status || !statusText ) { - statusText = "error"; - if ( status < 0 ) { - status = 0; - } - } - } - - // Set data for the fake xhr object - jqXHR.status = status; - jqXHR.statusText = ( nativeStatusText || statusText ) + ""; - - // Success/Error - if ( isSuccess ) { - deferred.resolveWith( callbackContext, [ success, statusText, jqXHR ] ); - } else { - deferred.rejectWith( callbackContext, [ jqXHR, statusText, error ] ); - } - - // Status-dependent callbacks - jqXHR.statusCode( statusCode ); - statusCode = undefined; - - if ( fireGlobals ) { - globalEventContext.trigger( isSuccess ? "ajaxSuccess" : "ajaxError", - [ jqXHR, s, isSuccess ? success : error ] ); - } - - // Complete - completeDeferred.fireWith( callbackContext, [ jqXHR, statusText ] ); - - if ( fireGlobals ) { - globalEventContext.trigger( "ajaxComplete", [ jqXHR, s ] ); - - // Handle the global AJAX counter - if ( !( --jQuery.active ) ) { - jQuery.event.trigger( "ajaxStop" ); - } - } - } - - return jqXHR; - }, - - getJSON: function( url, data, callback ) { - return jQuery.get( url, data, callback, "json" ); - }, - - getScript: function( url, callback ) { - return jQuery.get( url, undefined, callback, "script" ); - } -} ); - -jQuery.each( [ "get", "post" ], function( _i, method ) { - jQuery[ method ] = function( url, data, callback, type ) { - - // Shift arguments if data argument was omitted - if ( isFunction( data ) ) { - type = type || callback; - callback = data; - data = undefined; - } - - // The url can be an options object (which then must have .url) - return jQuery.ajax( jQuery.extend( { - url: url, - type: method, - dataType: type, - data: data, - success: callback - }, jQuery.isPlainObject( url ) && url ) ); - }; -} ); - -jQuery.ajaxPrefilter( function( s ) { - var i; - for ( i in s.headers ) { - if ( i.toLowerCase() === "content-type" ) { - s.contentType = s.headers[ i ] || ""; - } - } -} ); - - -jQuery._evalUrl = function( url, options, doc ) { - return jQuery.ajax( { - url: url, - - // Make this explicit, since user can override this through ajaxSetup (#11264) - type: "GET", - dataType: "script", - cache: true, - async: false, - global: false, - - // Only evaluate the response if it is successful (gh-4126) - // dataFilter is not invoked for failure responses, so using it instead - // of the default converter is kludgy but it works. - converters: { - "text script": function() {} - }, - dataFilter: function( response ) { - jQuery.globalEval( response, options, doc ); - } - } ); -}; - - -jQuery.fn.extend( { - wrapAll: function( html ) { - var wrap; - - if ( this[ 0 ] ) { - if ( isFunction( html ) ) { - html = html.call( this[ 0 ] ); - } - - // The elements to wrap the target around - wrap = jQuery( html, this[ 0 ].ownerDocument ).eq( 0 ).clone( true ); - - if ( this[ 0 ].parentNode ) { - wrap.insertBefore( this[ 0 ] ); - } - - wrap.map( function() { - var elem = this; - - while ( elem.firstElementChild ) { - elem = elem.firstElementChild; - } - - return elem; - } ).append( this ); - } - - return this; - }, - - wrapInner: function( html ) { - if ( isFunction( html ) ) { - return this.each( function( i ) { - jQuery( this ).wrapInner( html.call( this, i ) ); - } ); - } - - return this.each( function() { - var self = jQuery( this ), - contents = self.contents(); - - if ( contents.length ) { - contents.wrapAll( html ); - - } else { - self.append( html ); - } - } ); - }, - - wrap: function( html ) { - var htmlIsFunction = isFunction( html ); - - return this.each( function( i ) { - jQuery( this ).wrapAll( htmlIsFunction ? html.call( this, i ) : html ); - } ); - }, - - unwrap: function( selector ) { - this.parent( selector ).not( "body" ).each( function() { - jQuery( this ).replaceWith( this.childNodes ); - } ); - return this; - } -} ); - - -jQuery.expr.pseudos.hidden = function( elem ) { - return !jQuery.expr.pseudos.visible( elem ); -}; -jQuery.expr.pseudos.visible = function( elem ) { - return !!( elem.offsetWidth || elem.offsetHeight || elem.getClientRects().length ); -}; - - - - -jQuery.ajaxSettings.xhr = function() { - try { - return new window.XMLHttpRequest(); - } catch ( e ) {} -}; - -var xhrSuccessStatus = { - - // File protocol always yields status code 0, assume 200 - 0: 200, - - // Support: IE <=9 only - // #1450: sometimes IE returns 1223 when it should be 204 - 1223: 204 - }, - xhrSupported = jQuery.ajaxSettings.xhr(); - -support.cors = !!xhrSupported && ( "withCredentials" in xhrSupported ); -support.ajax = xhrSupported = !!xhrSupported; - -jQuery.ajaxTransport( function( options ) { - var callback, errorCallback; - - // Cross domain only allowed if supported through XMLHttpRequest - if ( support.cors || xhrSupported && !options.crossDomain ) { - return { - send: function( headers, complete ) { - var i, - xhr = options.xhr(); - - xhr.open( - options.type, - options.url, - options.async, - options.username, - options.password - ); - - // Apply custom fields if provided - if ( options.xhrFields ) { - for ( i in options.xhrFields ) { - xhr[ i ] = options.xhrFields[ i ]; - } - } - - // Override mime type if needed - if ( options.mimeType && xhr.overrideMimeType ) { - xhr.overrideMimeType( options.mimeType ); - } - - // X-Requested-With header - // For cross-domain requests, seeing as conditions for a preflight are - // akin to a jigsaw puzzle, we simply never set it to be sure. - // (it can always be set on a per-request basis or even using ajaxSetup) - // For same-domain requests, won't change header if already provided. - if ( !options.crossDomain && !headers[ "X-Requested-With" ] ) { - headers[ "X-Requested-With" ] = "XMLHttpRequest"; - } - - // Set headers - for ( i in headers ) { - xhr.setRequestHeader( i, headers[ i ] ); - } - - // Callback - callback = function( type ) { - return function() { - if ( callback ) { - callback = errorCallback = xhr.onload = - xhr.onerror = xhr.onabort = xhr.ontimeout = - xhr.onreadystatechange = null; - - if ( type === "abort" ) { - xhr.abort(); - } else if ( type === "error" ) { - - // Support: IE <=9 only - // On a manual native abort, IE9 throws - // errors on any property access that is not readyState - if ( typeof xhr.status !== "number" ) { - complete( 0, "error" ); - } else { - complete( - - // File: protocol always yields status 0; see #8605, #14207 - xhr.status, - xhr.statusText - ); - } - } else { - complete( - xhrSuccessStatus[ xhr.status ] || xhr.status, - xhr.statusText, - - // Support: IE <=9 only - // IE9 has no XHR2 but throws on binary (trac-11426) - // For XHR2 non-text, let the caller handle it (gh-2498) - ( xhr.responseType || "text" ) !== "text" || - typeof xhr.responseText !== "string" ? - { binary: xhr.response } : - { text: xhr.responseText }, - xhr.getAllResponseHeaders() - ); - } - } - }; - }; - - // Listen to events - xhr.onload = callback(); - errorCallback = xhr.onerror = xhr.ontimeout = callback( "error" ); - - // Support: IE 9 only - // Use onreadystatechange to replace onabort - // to handle uncaught aborts - if ( xhr.onabort !== undefined ) { - xhr.onabort = errorCallback; - } else { - xhr.onreadystatechange = function() { - - // Check readyState before timeout as it changes - if ( xhr.readyState === 4 ) { - - // Allow onerror to be called first, - // but that will not handle a native abort - // Also, save errorCallback to a variable - // as xhr.onerror cannot be accessed - window.setTimeout( function() { - if ( callback ) { - errorCallback(); - } - } ); - } - }; - } - - // Create the abort callback - callback = callback( "abort" ); - - try { - - // Do send the request (this may raise an exception) - xhr.send( options.hasContent && options.data || null ); - } catch ( e ) { - - // #14683: Only rethrow if this hasn't been notified as an error yet - if ( callback ) { - throw e; - } - } - }, - - abort: function() { - if ( callback ) { - callback(); - } - } - }; - } -} ); - - - - -// Prevent auto-execution of scripts when no explicit dataType was provided (See gh-2432) -jQuery.ajaxPrefilter( function( s ) { - if ( s.crossDomain ) { - s.contents.script = false; - } -} ); - -// Install script dataType -jQuery.ajaxSetup( { - accepts: { - script: "text/javascript, application/javascript, " + - "application/ecmascript, application/x-ecmascript" - }, - contents: { - script: /\b(?:java|ecma)script\b/ - }, - converters: { - "text script": function( text ) { - jQuery.globalEval( text ); - return text; - } - } -} ); - -// Handle cache's special case and crossDomain -jQuery.ajaxPrefilter( "script", function( s ) { - if ( s.cache === undefined ) { - s.cache = false; - } - if ( s.crossDomain ) { - s.type = "GET"; - } -} ); - -// Bind script tag hack transport -jQuery.ajaxTransport( "script", function( s ) { - - // This transport only deals with cross domain or forced-by-attrs requests - if ( s.crossDomain || s.scriptAttrs ) { - var script, callback; - return { - send: function( _, complete ) { - script = jQuery( " - - - - - - - - - - - - - - - Skip to contents - - -
-
-
- - - -

r-universe

-

Project Status: Active – The project has reached a stable, usable state and is being actively developed.

-

DOI

-
-

Overview -

-

Simple Principal Components Analysis (PCA; see vignette("pca")) and (Multiple) Correspondence Analysis (CA) based on the Singular Value Decomposition (SVD). This package provides S4 classes and methods to compute, extract, summarize and visualize results of multivariate data analysis. It also includes methods for partial bootstrap validation.

-

There are many very good packages for multivariate data analysis (such as FactoMineR, ade4, vegan or ca, all extended by FactoExtra). dimensio is designed to be as simple as possible, providing all the necessary tools to explore the results of the analysis.

-
To cite dimensio in publications use:
-
-  Frerebeau N (2023). _dimensio: Multivariate Data Analysis_.
-  Université Bordeaux Montaigne, Pessac, France.
-  doi:10.5281/zenodo.4478530 <https://doi.org/10.5281/zenodo.4478530>,
-  R package version 0.4.1, <https://packages.tesselle.org/dimensio/>.
-
-A BibTeX entry for LaTeX users is
-
-  @Manual{,
-    author = {Nicolas Frerebeau},
-    title = {{dimensio: Multivariate Data Analysis}},
-    year = {2023},
-    organization = {Université Bordeaux Montaigne},
-    address = {Pessac, France},
-    note = {R package version 0.4.1},
-    doi = {10.5281/zenodo.4478530},
-    url = {https://packages.tesselle.org/dimensio/},
-  }
-
-This package is a part of the tesselle project
-<https://www.tesselle.org>.
-
-
-

Installation -

-

You can install the released version of dimensio from CRAN with:

-
-install.packages("dimensio")
-

And the development version from GitHub with:

-
-# install.packages("remotes")
-remotes::install_github("tesselle/dimensio")
-
-
-

Usage -

-
-## Install extra packages (if needed)
-# install.packages("khroma")
-
-## Load packages
-library(dimensio)
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Compute -

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-## Load data
-data(iris)
-
-## Compute PCA
-## (non numeric variables are automatically removed)
-X <- pca(iris, center = TRUE, scale = TRUE)
-#> 1 qualitative variable was removed: Species.
-
-
-

Extract -

-

dimensio provides several methods to extract the results:

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    -
  • -get_data() returns the original data.
  • -
  • -get_contributions() returns the contributions to the definition of the principal dimensions.
  • -
  • -get_coordinates() returns the principal or standard coordinates.
  • -
  • -get_correlations() returns the correlations between variables and dimensions.
  • -
  • -get_cos2() returns the cos2 values (i.e. the quality of the representation of the points on the factor map).
  • -
  • -get_eigenvalues() returns the eigenvalues, the percentages of variance and the cumulative percentages of variance.
  • -
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Visualize -

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The package allows to quickly visualize the results:

- -

The viz_*() functions allow to highlight additional information by varying different graphical elements (color, transparency, shape and size of symbols…).

-
-## Form biplot
-biplot(X, type = "form")
-

-
-## Highlight species
-viz_individuals(
-  x = X, 
-  highlight = iris$Species, 
-  col = khroma::color("high contrast")(3), 
-  pch = 16
-)
-## Add ellipses
-viz_tolerance(
-  x = X, 
-  group = iris$Species, 
-  level = 0.95,
-  border = khroma::color("high contrast")(3)
-)
-
-## Highlight petal length
-viz_individuals(
-  x = X,
-  highlight = iris$Petal.Length,
-  col = khroma::color("iridescent")(255), 
-  cex = c(1, 2),
-  pch = 16
-)
-

-
-## Plot variables factor map
-viz_variables(X)
-
-## Scree plot
-screeplot(X, eigenvalues = FALSE, cumulative = TRUE)
-

-
-
-
-

Contributing -

-

Please note that the dimensio project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.

-
-
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- - - - - - - diff --git a/dimensio/dev/link.svg b/dimensio/dev/link.svg deleted file mode 100644 index 88ad82769..000000000 --- a/dimensio/dev/link.svg +++ /dev/null @@ -1,12 +0,0 @@ - - - - - - diff --git a/dimensio/dev/logo.png b/dimensio/dev/logo.png deleted file mode 100644 index a19b3e7a5..000000000 Binary files a/dimensio/dev/logo.png and /dev/null differ diff --git a/dimensio/dev/news/index.html b/dimensio/dev/news/index.html deleted file mode 100644 index 1894866a3..000000000 --- a/dimensio/dev/news/index.html +++ /dev/null @@ -1,187 +0,0 @@ - -Changelog • dimensio - Skip to contents - - -
-
-
- -
-

dimensio 0.4.1.9000

-
-

New classes and methods

-
  • Add cdt() to compute the complete disjunctive table of a factor table.
  • -
  • Add burt() to compute the Burt table of a factor table.
  • -
  • Add mca() to compute multiple correspondence analysis.
  • -
-
-

Enhancements

-
  • -biplot() allows to produce a symetric CA biplot.
  • -
  • Set graphical parameters as arguments in biplot().
  • -
  • Add automatic legend in biplot().
  • -
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Internals

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  • Import arkhe.
  • -
-
-
-

dimensio 0.4.1

CRAN release: 2023-10-19

-
-

Bugfixes & changes

-
  • Put ... after required arguments.
  • -
-
-

Enhancements

-
-
-
-

dimensio 0.4.0

CRAN release: 2023-08-23

-
-

New classes and methods

-
  • Add screeplot() to produce a scree plot.
  • -
  • Add viz_*() methods to replace plot_*() methods.
  • -
-
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Bugfixes & changes

-
  • Deprecate plot_*() methods. The internal use of ggplot2 is poorly interoperable or composable. This will reduces hard dependencies.
  • -
-
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dimensio 0.3.1

CRAN release: 2023-04-04

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Bugfixes & changes

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dimensio 0.3.0

CRAN release: 2022-08-15

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-

New classes and methods

-
-
-

Enhancements

-
  • -plot_rows and plot_columns() gained new arguments allowing to highlight additional information by varying different graphical elements.
  • -
  • -get_coordinates() gained a new argument allowing to select principal or standard coordinates.
  • -
-
-

Breaking changes

-
  • Remove plot() methods for PCA and CA classes.
  • -
  • Remove bootstrap() and jackknife() methods for numeric and integer vectors.
  • -
-
-
-

dimensio 0.2.2

CRAN release: 2021-09-18

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New classes and methods

-
  • Add bootstrap() and jackknife() methods for numeric and integer vectors.
  • -
-
-

Bugfixes & changes

-
  • Fix sign of singular vectors for consistency with FactoMineR.
  • -
-
-

Internals

-
  • Add BootstrapVector and JackknifeVector classes to store bootstrap and jackknife resampling values (inherit from base numeric).
  • -
-
-
-

dimensio 0.2.1

CRAN release: 2021-05-17

-
-

Bugfixes & changes

-
  • Fix row names in build_results(). When initializing a MultivariateResults object with supplementary observations, the row names of the standard and contributions matrices were incorrect (computation moves all supplementary points at the end of the results).
  • -
-
-
-

dimensio 0.2.0

CRAN release: 2021-04-22

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-

New classes and methods

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  • Add bootstrap() for partial bootstrap analysis.
  • -
  • Add BootstrapCA and BootstrapPCA: S4 classes to store partial bootstrap analysis.
  • -
-
-

Bugfixes & changes

-
-
-
-

dimensio 0.1.0

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  • Prelease.
  • -
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- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/pkgdown.js b/dimensio/dev/pkgdown.js deleted file mode 100644 index 5fccd9c0e..000000000 --- a/dimensio/dev/pkgdown.js +++ /dev/null @@ -1,156 +0,0 @@ -/* http://gregfranko.com/blog/jquery-best-practices/ */ -(function($) { - $(function() { - - $('nav.navbar').headroom(); - - Toc.init({ - $nav: $("#toc"), - $scope: $("main h2, main h3, main h4, main h5, main h6") - }); - - if ($('#toc').length) { - $('body').scrollspy({ - target: '#toc', - offset: $("nav.navbar").outerHeight() + 1 - }); - } - - // Activate popovers - $('[data-bs-toggle="popover"]').popover({ - container: 'body', - html: true, - trigger: 'focus', - placement: "top", - sanitize: false, - }); - - $('[data-bs-toggle="tooltip"]').tooltip(); - - /* Clipboard --------------------------*/ - - function changeTooltipMessage(element, msg) { - var tooltipOriginalTitle=element.getAttribute('data-original-title'); - element.setAttribute('data-original-title', msg); - $(element).tooltip('show'); - element.setAttribute('data-original-title', tooltipOriginalTitle); - } - - if(ClipboardJS.isSupported()) { - $(document).ready(function() { - var copyButton = ""; - - $("div.sourceCode").addClass("hasCopyButton"); - - // Insert copy buttons: - $(copyButton).prependTo(".hasCopyButton"); - - // Initialize tooltips: - $('.btn-copy-ex').tooltip({container: 'body'}); - - // Initialize clipboard: - var clipboard = new ClipboardJS('[data-clipboard-copy]', { - text: function(trigger) { - return trigger.parentNode.textContent.replace(/\n#>[^\n]*/g, ""); - } - }); - - clipboard.on('success', function(e) { - changeTooltipMessage(e.trigger, 'Copied!'); - e.clearSelection(); - }); - - clipboard.on('error', function() { - changeTooltipMessage(e.trigger,'Press Ctrl+C or Command+C to copy'); - }); - - }); - } - - /* Search marking --------------------------*/ - var url = new URL(window.location.href); - var toMark = url.searchParams.get("q"); - var mark = new Mark("main#main"); - if (toMark) { - mark.mark(toMark, { - accuracy: { - value: "complementary", - limiters: [",", ".", ":", "/"], - } - }); - } - - /* Search --------------------------*/ - /* Adapted from https://github.com/rstudio/bookdown/blob/2d692ba4b61f1e466c92e78fd712b0ab08c11d31/inst/resources/bs4_book/bs4_book.js#L25 */ - // Initialise search index on focus - var fuse; - $("#search-input").focus(async function(e) { - if (fuse) { - return; - } - - $(e.target).addClass("loading"); - var response = await fetch($("#search-input").data("search-index")); - var data = await response.json(); - - var options = { - keys: ["what", "text", "code"], - ignoreLocation: true, - threshold: 0.1, - includeMatches: true, - includeScore: true, - }; - fuse = new Fuse(data, options); - - $(e.target).removeClass("loading"); - }); - - // Use algolia autocomplete - var options = { - autoselect: true, - debug: true, - hint: false, - minLength: 2, - }; - var q; -async function searchFuse(query, callback) { - await fuse; - - var items; - if (!fuse) { - items = []; - } else { - q = query; - var results = fuse.search(query, { limit: 20 }); - items = results - .filter((x) => x.score <= 0.75) - .map((x) => x.item); - if (items.length === 0) { - items = [{dir:"Sorry 😿",previous_headings:"",title:"No results found.",what:"No results found.",path:window.location.href}]; - } - } - callback(items); -} - $("#search-input").autocomplete(options, [ - { - name: "content", - source: searchFuse, - templates: { - suggestion: (s) => { - if (s.title == s.what) { - return `${s.dir} >
${s.title}
`; - } else if (s.previous_headings == "") { - return `${s.dir} >
${s.title}
> ${s.what}`; - } else { - return `${s.dir} >
${s.title}
> ${s.previous_headings} > ${s.what}`; - } - }, - }, - }, - ]).on('autocomplete:selected', function(event, s) { - window.location.href = s.path + "?q=" + q + "#" + s.id; - }); - }); -})(window.jQuery || window.$) - - diff --git a/dimensio/dev/pkgdown.yml b/dimensio/dev/pkgdown.yml deleted file mode 100644 index 67eaa4d81..000000000 --- a/dimensio/dev/pkgdown.yml +++ /dev/null @@ -1,10 +0,0 @@ -pandoc: 2.19.2 -pkgdown: 2.0.7 -pkgdown_sha: ~ -articles: - pca: pca.html -last_built: 2023-11-24T15:02Z -urls: - reference: https://packages.tesselle.org/dimensio/reference - article: https://packages.tesselle.org/dimensio/articles - diff --git a/dimensio/dev/pull_request_template.html b/dimensio/dev/pull_request_template.html deleted file mode 100644 index 8655048d1..000000000 --- a/dimensio/dev/pull_request_template.html +++ /dev/null @@ -1,94 +0,0 @@ - -NA • dimensio - Skip to contents - - -
-
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- - -
-

Description

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- - -
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Example

- - -
- - -
- - -
- - - -
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-
-
- -
-

An S4 class to store the results of a simple correspondence analysis.

-
- - -
-

Note

-

This class inherits from MultivariateAnalysis.

-
- -
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Data from Lebart et al. 2006, p. 170-172
-data("colours")
-
-## The chi square of independence between the two variables
-stats::chisq.test(colours)
-#> 
-#> 	Pearson's Chi-squared test
-#> 
-#> data:  colours
-#> X-squared = 138.29, df = 9, p-value < 2.2e-16
-#> 
-
-## Compute correspondence analysis
-X <- ca(colours)
-
-## Plot rows
-viz_rows(X, labels = TRUE)
-
-
-## Plot columns
-viz_columns(X, labels = TRUE)
-
-
-## Get row coordinates
-head(get_coordinates(X, margin = 1))
-#>                  F1          F2           F3  .sup
-#> marron   -0.4921577 -0.08832151  0.021611305 FALSE
-#> noisette -0.2125969  0.16739109 -0.100518284 FALSE
-#> vert      0.1617534  0.33903957  0.087597437 FALSE
-#> bleu      0.5474139 -0.08295428 -0.004709408 FALSE
-
-## Get column coordinates
-head(get_coordinates(X, margin = 2))
-#>                 F1          F2          F3  .sup
-#> brun    -0.5045624 -0.21482046  0.05550909 FALSE
-#> chatain -0.1482527  0.03266635 -0.04880414 FALSE
-#> roux    -0.1295233  0.31964240  0.08315117 FALSE
-#> blond    0.8353478 -0.06957934  0.01621471 FALSE
-
-## Get row distances to centroid
-head(get_distances(X, margin = 1))
-#>     marron   noisette       vert       bleu 
-#> 0.25048691 0.08332116 0.14878530 0.30656555 
-
-## Get row inertias
-head(get_inertia(X, margin = 1))
-#>     marron   noisette       vert       bleu 
-#> 0.09308635 0.01308930 0.01608490 0.11133715 
-
-## Get row contributions
-head(get_contributions(X, margin = 1))
-#>                 F1       F2         F3
-#> marron   43.115744 13.04249  6.6795992
-#> noisette  3.400961 19.80398 61.0855951
-#> vert      1.354851 55.90952 31.9248234
-#> bleu     52.128445 11.24401  0.3099822
-
-## Get eigenvalues
-get_eigenvalues(X)
-#>    eigenvalues  variance cumulative
-#> F1 0.208772652 89.372732   89.37273
-#> F2 0.022226615  9.514911   98.88764
-#> F3 0.002598439  1.112356  100.00000
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/MultivariateAnalysis.html b/dimensio/dev/reference/MultivariateAnalysis.html deleted file mode 100644 index a74a85292..000000000 --- a/dimensio/dev/reference/MultivariateAnalysis.html +++ /dev/null @@ -1,132 +0,0 @@ - -Output of Multivariate Data Analysis — MultivariateAnalysis • dimensio - Skip to contents - - -
-
-
- -
-

A virtual S4 class to store the output of a multivariate data analysis.

-
- - -
-

Slots

- - -
data
-

A numeric matrix.

- - -
dimension
-

An integer giving the dimension of the solution.

- - -
singular_values
-

A numeric vector giving the singular values.

- - -
rows
-

A MultivariateResults object.

- - -
columns
-

A MultivariateResults object.

- - -
-
-

Subset

- - -

In the code snippets below, x is a MultivariateAnalysis object.

x[[i]]
-

Extracts information from a slot selected by subscript i. -i is a length-one character vector.

- - -
- -
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/MultivariateBootstrap.html b/dimensio/dev/reference/MultivariateBootstrap.html deleted file mode 100644 index 79e5a2ad8..000000000 --- a/dimensio/dev/reference/MultivariateBootstrap.html +++ /dev/null @@ -1,107 +0,0 @@ - -Output of Bootstrap Replications — MultivariateBootstrap • dimensio - Skip to contents - - -
-
-
- -
-

A virtual S4 class to store the output of a bootstrap analysis.

-
- - -
-

Slots

- - -
replications
-

An integer giving the number of bootstrap -replications.

- - -
- -
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/MultivariateResults.html b/dimensio/dev/reference/MultivariateResults.html deleted file mode 100644 index 3cab6cad3..000000000 --- a/dimensio/dev/reference/MultivariateResults.html +++ /dev/null @@ -1,145 +0,0 @@ - -Multivariate Data Analysis Results — MultivariateResults • dimensio - Skip to contents - - -
-
-
- -
-

An S4 class to store the results of a multivariate data analysis.

-
- - -
-

Slots

- - -
names
-

A character vector specifying the row names.

- - -
principal
-

A numeric matrix giving the principal coordinates.

- - -
standard
-

A numeric matrix giving the standard coordinates.

- - -
contributions
-

A numeric matrix giving the contributions to the -definition of the dimensions.

- - -
cosine
-

A numeric matrix giving the \(cos^2\) values.

- - -
distances
-

A numeric vector giving the distances to centroid.

- - -
weights
-

A numeric vector giving the masses/weights.

- - -
supplement
-

A logical vector specifying the supplementary points.

- - -
order
-

An integer vector giving the original indices of the data -(computation moves all supplementary points at the end of the results).

- - -
groups
-

A character vector specifying the class for each -observation.

- - -
- -
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/MultivariateSummary.html b/dimensio/dev/reference/MultivariateSummary.html deleted file mode 100644 index 9647e3824..000000000 --- a/dimensio/dev/reference/MultivariateSummary.html +++ /dev/null @@ -1,122 +0,0 @@ - -Summary of Multivariate Data Analysis — MultivariateSummary • dimensio - Skip to contents - - -
-
-
- -
-

A virtual S4 class to store the summary of a multivariate data analysis.

-
- - -
-

Slots

- - -
data
-

A numeric matrix.

- - -
eigenvalues
-

A numeric matrix.

- - -
results
-

A numeric matrix.

- - -
supplement
-

A logical vector specifying the supplementary points.

- - -
margin
-

An integer.

- - -
- -
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/PCA-class.html b/dimensio/dev/reference/PCA-class.html deleted file mode 100644 index b2f1a8cdf..000000000 --- a/dimensio/dev/reference/PCA-class.html +++ /dev/null @@ -1,158 +0,0 @@ - -PCA Results — PCA-class • dimensio - Skip to contents - - -
-
-
- -
-

An S4 class to store the results of a principal components analysis.

-
- - -
-

Slots

- - -
center
-

A numeric vector giving the column mean of the initial -dataset (active individuals only).

- - -
scale
-

A numeric vector giving the column standard deviations of the -initial dataset (active individuals only).

- - -
-
-

Note

-

This class inherits from MultivariateAnalysis.

-
- -
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE, sup_row = sample(150, 10), sup_col = 2)
-#> 1 qualitative variable was removed: Species.
-
-## Get row coordinates
-head(get_coordinates(X, margin = 1))
-#>          F1          F2  .sup
-#> 1 -2.038822  0.30343996 FALSE
-#> 2 -2.174225  0.10641058 FALSE
-#> 3 -2.343292 -0.07580517 FALSE
-#> 4 -2.343668 -0.20394712 FALSE
-#> 5 -2.106523  0.20492527 FALSE
-#> 6 -1.581835  0.41785687 FALSE
-
-## Get column coordinates
-head(get_coordinates(X, margin = 2))
-#>                      F1         F2  .sup
-#> Sepal.Length  0.9308544  0.3643509 FALSE
-#> Petal.Length  0.9840002 -0.1164774 FALSE
-#> Petal.Width   0.9662991 -0.2323751 FALSE
-#> Sepal.Width  -0.3126997  0.4643739  TRUE
-
-## Get correlations between variables and dimensions
-head(get_correlations(X))
-#>                      F1         F2  .sup
-#> Sepal.Length  0.9308544  0.3643509 FALSE
-#> Petal.Length  0.9840002 -0.1164774 FALSE
-#> Petal.Width   0.9662991 -0.2323751 FALSE
-#> Sepal.Width  -0.3126997  0.4643739  TRUE
-
-## Get eigenvalues
-get_eigenvalues(X)
-#>    eigenvalues  variance cumulative
-#> F1   2.7684805 93.252596    93.2526
-#> F2   0.2003167  6.747404   100.0000
-
-
-
- - -
- - - -
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-
-
- -
-

Abundances of Marine Species in Sea-Bed Samples

-
- -
-

Usage

-
benthos
-
- -
-

Format

-

A data.frame with 13 columns (sites) and 92 rows (species).

-
- -
-

See also

-

Other datasets: -colours, -countries

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/biplot-1.png b/dimensio/dev/reference/biplot-1.png deleted file mode 100644 index e42a06a51..000000000 Binary files a/dimensio/dev/reference/biplot-1.png and /dev/null differ diff --git a/dimensio/dev/reference/biplot-2.png b/dimensio/dev/reference/biplot-2.png deleted file mode 100644 index 32b7f6aac..000000000 Binary files a/dimensio/dev/reference/biplot-2.png and /dev/null differ diff --git a/dimensio/dev/reference/biplot-3.png b/dimensio/dev/reference/biplot-3.png deleted file mode 100644 index 893009470..000000000 Binary files a/dimensio/dev/reference/biplot-3.png and /dev/null differ diff --git a/dimensio/dev/reference/biplot-4.png b/dimensio/dev/reference/biplot-4.png deleted file mode 100644 index 102d8a1d2..000000000 Binary files a/dimensio/dev/reference/biplot-4.png and /dev/null differ diff --git a/dimensio/dev/reference/biplot-5.png b/dimensio/dev/reference/biplot-5.png deleted file mode 100644 index 3bf121a3a..000000000 Binary files a/dimensio/dev/reference/biplot-5.png and /dev/null differ diff --git a/dimensio/dev/reference/biplot.html b/dimensio/dev/reference/biplot.html deleted file mode 100644 index 0525229aa..000000000 --- a/dimensio/dev/reference/biplot.html +++ /dev/null @@ -1,343 +0,0 @@ - -Biplot — biplot • dimensio - Skip to contents - - -
-
-
- -
-

Biplot

-
- -
-

Usage

-
# S4 method for CA
-biplot(
-  x,
-  ...,
-  axes = c(1, 2),
-  type = c("symetric", "rows", "columns", "contributions"),
-  active = TRUE,
-  sup = TRUE,
-  labels = NULL,
-  col.rows = c("#E69F00", "#009E73"),
-  col.columns = c("#56B4E9", "#F0E442"),
-  cex.rows = graphics::par("cex"),
-  cex.columns = graphics::par("cex"),
-  pch.rows = 16,
-  pch.columns = 17,
-  xlim = NULL,
-  ylim = NULL,
-  main = NULL,
-  sub = NULL,
-  legend = list(x = "topleft")
-)
-
-# S4 method for PCA
-biplot(
-  x,
-  ...,
-  axes = c(1, 2),
-  type = c("form", "covariance"),
-  active = TRUE,
-  sup = TRUE,
-  labels = "variables",
-  col.rows = c("#E69F00", "#009E73"),
-  col.columns = c("#56B4E9", "#F0E442"),
-  pch = 16,
-  cex = 1,
-  lty = 1,
-  lwd = 2,
-  xlim = NULL,
-  ylim = NULL,
-  main = NULL,
-  sub = NULL,
-  legend = list(x = "topleft")
-)
-
- -
-

Arguments

-
x
-

A CA, MCA or PCA object.

- - -
...
-

Currently not used.

- - -
axes
-

A length-two numeric vector giving the dimensions to be -plotted.

- - -
type
-

A character string specifying the biplot to be plotted -(see below). It must be one of "rows", "columns", "contribution" (CA), -"form" or "covariance" (PCA). Any unambiguous substring can be given.

- - -
active
-

A logical scalar: should the active observations be -plotted?

- - -
sup
-

A logical scalar: should the supplementary observations be -plotted?

- - -
labels
-

A character vector specifying whether -"rows"/"individuals" and/or "columns"/"variables" names must be -drawn. Any unambiguous substring can be given.

- - -
col.rows
-

A length-two vector of color specification for the active -and supplementary rows.

- - -
col.columns
-

A length-two vector of color specification for the -active and supplementary columns.

- - -
xlim
-

A length-two numeric vector giving the x limits of the plot. -The default value, NULL, indicates that the range of the -finite values to be plotted should be used.

- - -
ylim
-

A length-two numeric vector giving the y limits of the plot. -The default value, NULL, indicates that the range of the -finite values to be plotted should be used.

- - -
main
-

A character string giving a main title for the plot.

- - -
sub
-

A character string giving a subtitle for the plot.

- - -
legend
-

A list of additional arguments to be passed to -graphics::legend(); names of the list are used as argument names. -If NULL, no legend is displayed.

- - -
pch, pch.rows, pch.columns
-

A symbol specification.

- - -
cex, cex.rows, cex.columns
-

A numeric vector giving the amount by -which plotting characters and symbols should be scaled relative to the -default.

- - -
lty, lwd
-

A specification for the line type and width.

- -
-
-

Value

- - -

biplot() is called for its side-effects: it results in a graphic being -displayed. Invisibly returns x.

-
-
-

Details

-

A biplot is the simultaneous representation of rows and columns of a -rectangular dataset. It is the generalization of a scatterplot to the case -of mutlivariate data: it allows to visualize as much information as possible -in a single graph (Greenacre 2010).

-

Biplots have the drawbacks of their advantages: they can quickly become -difficult to read as they display a lot of information at once. It may then -be preferable to visualize the results for individuals and variables -separately.

-
-
-

PCA Biplots

- - -
form (row-metric-preserving)
-

The form biplot favors the -representation of the individuals: the distance between the individuals -approximates the Euclidean distance between rows. In the form biplot the -length of a vector approximates the quality of the representation of the -variable.

- -
covariance (column-metric-preserving)
-

The covariance biplot favors -the representation of the variables: the length of a vector approximates -the standard deviation of the variable and the cosine of the angle formed -by two vectors approximates the correlation between the two variables. In -the covariance biplot the distance between the individuals approximates the -Mahalanobis distance between rows.

- - -
-
-

CA Biplots

- - -
symetric (symetric biplot)
-

Represents the row and column profiles -simultaneously in a common space: rows and columns are in standard -coordinates. Note that the the inter-distance between any row and column -items is not meaningful.

- -
rows (asymetric biplot)
-

Row principal biplot (row-metric-preserving) -with rows in principal coordinates and columns in standard coordinates.

- -
columns (asymetric biplot)
-

Column principal biplot -(column-metric-preserving) with rows in standard coordinates and columns in -principal coordinates.

- -
contribution (asymetric biplot)
-

Contribution biplot with rows in -principal coordinates and columns in standard coordinates multiplied by the -square roots of their masses.

- - -
-
-

References

-

Aitchison, J. and Greenacre, M. J. (2002). Biplots of Compositional Data. -Journal of the Royal Statistical Society: Series C (Applied Statistics), -51(4): 375-92. doi:10.1111/1467-9876.00275 -.

-

Greenacre, M. J. (2010). Biplots in Practice. Bilbao: Fundación BBVA.

-
-
-

See also

-

Other plot methods: -screeplot(), -viz_contributions(), -viz_individuals(), -viz_variables(), -viz_wrap, -wrap

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Replicate examples from Greenacre 2007, p. 59-68
-data("countries")
-
-## Compute principal components analysis
-## All rows and all columns obtain the same weight
-row_w <- rep(1 / nrow(countries), nrow(countries)) # 1/13
-col_w <- rep(1 / ncol(countries), ncol(countries)) # 1/6
-Y <- pca(countries, scale = FALSE, weight_row = row_w, weight_col = col_w)
-
-## Row-metric-preserving biplot (form biplot)
-biplot(Y, type = "form")
-
-
-## Column-metric-preserving biplot (covariance biplot)
-biplot(Y, type = "covariance")
-
-
-## Replicate examples from Greenacre 2007, p. 79-88
-data("benthos")
-
-## Compute correspondence analysis
-X <- ca(benthos)
-
-## Symetric CA biplot
-biplot(X, labels = "columns")
-
-
-## Row principal CA biplot
-biplot(X, type = "row", labels = "columns")
-
-
-## Column principal CA biplot
-biplot(X, type = "column", labels = "columns")
-
-
-## Contribution CA biplot
-biplot(X, type = "contrib", labels = NULL)
-
-
-
-
- - -
- - - -
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-
-
- -
-

Checks analysis with partial bootstrap resampling.

-
- -
-

Usage

-
# S4 method for CA
-bootstrap(object, n = 30)
-
-# S4 method for PCA
-bootstrap(object, n = 30)
-
- -
-

Arguments

-
object
-

A CA or PCA object.

- - -
n
-

A non-negative integer giving the number of bootstrap -replications.

- -
-
-

Value

- - -

Returns a BootstrapCA or a BootstrapPCA object.

-
-
-

References

-

Greenacre, Michael J. Theory and Applications of Correspondence -Analysis. London: Academic Press, 1984.

-

Lebart, L., Piron, M. and Morineau, A. Statistique exploratoire -multidimensionnelle: visualisation et inférence en fouille de données. -Paris: Dunod, 2006.

-

Lockyear, K. (2013). Applying Bootstrapped Correspondence Analysis to -Archaeological Data. Journal of Archaeological Science, 40(12): 4744-4753. -doi:10.1016/j.jas.2012.08.035 -.

-

Ringrose, T. J. (1992). Bootstrapping and Correspondence Analysis in -Archaeology. Journal of Archaeological Science, 19(6): 615-629. -doi:10.1016/0305-4403(92)90032-X -.

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Bootstrap on CA
-## Data from Lebart et al. 2006, p. 170-172
-data("colours")
-
-## Compute correspondence analysis
-X <- ca(colours)
-
-## Bootstrap (30 replicates)
-Y <- bootstrap(X, n = 30)
-
-if (FALSE) {
-## Get replicated coordinates
-get_replications(Y, margin = 1)
-get_replications(Y, margin = 2)
-}
-
-## Plot with ellipses
-viz_rows(Y)
-viz_tolerance(Y, margin = 1, level = c(0.68, 0.95))
-
-
-viz_columns(Y)
-viz_tolerance(Y, margin = 2, level = c(0.68, 0.95))
-
-
-## Plot with convex hulls
-viz_columns(Y)
-viz_hull(Y, margin = 2)
-
-
-## Bootstrap on PCA
-## Compute principal components analysis
-data("iris")
-X <- pca(iris)
-#> 1 qualitative variable was removed: Species.
-
-## Bootstrap (30 replicates)
-Y <- bootstrap(X, n = 30)
-
-## Plot with ellipses
-viz_variables(Y)
-viz_tolerance(Y, margin = 2, level = c(0.68, 0.95))
-
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/ca-1.png b/dimensio/dev/reference/ca-1.png deleted file mode 100644 index b23932cca..000000000 Binary files a/dimensio/dev/reference/ca-1.png and /dev/null differ diff --git a/dimensio/dev/reference/ca-2.png b/dimensio/dev/reference/ca-2.png deleted file mode 100644 index cf3db5afc..000000000 Binary files a/dimensio/dev/reference/ca-2.png and /dev/null differ diff --git a/dimensio/dev/reference/ca.html b/dimensio/dev/reference/ca.html deleted file mode 100644 index 6cc30a944..000000000 --- a/dimensio/dev/reference/ca.html +++ /dev/null @@ -1,214 +0,0 @@ - -Correspondence Analysis — ca • dimensio - Skip to contents - - -
-
-
- -
-

Computes a simple correspondence analysis based on the singular value -decomposition.

-
- -
-

Usage

-
ca(object, ...)
-
-# S4 method for data.frame
-ca(object, rank = NULL, sup_row = NULL, sup_col = NULL)
-
-# S4 method for matrix
-ca(object, rank = NULL, sup_row = NULL, sup_col = NULL)
-
- -
-

Arguments

-
object
-

A \(m \times p\) numeric matrix or a -data.frame.

- - -
...
-

Currently not used.

- - -
rank
-

An integer value specifying the maximal number of -components to be kept in the results. If NULL (the default), -\(min(m, p) - 1\) components will be returned.

- - -
sup_row
-

A vector specifying the indices of the supplementary rows.

- - -
sup_col
-

A vector specifying the indices of the supplementary columns.

- -
-
-

Value

- - -

A CA object.

-
-
-

References

-

Greenacre, M. J. Theory and Applications of Correspondence Analysis. -London: Academic Press, 1984.

-

Greenacre, M. J. Correspondence Analysis in Practice. Seconde edition. -Interdisciplinary Statistics Series. Boca Raton: Chapman & Hall/CRC, 2007.

-

Lebart, L., Piron, M. and Morineau, A. Statistique exploratoire -multidimensionnelle: visualisation et inférence en fouille de données. -Paris: Dunod, 2006.

-
-
-

See also

-

svd()

-

Other multivariate analysis: -mca(), -pca(), -predict()

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Data from Lebart et al. 2006, p. 170-172
-data("colours")
-
-## The chi square of independence between the two variables
-stats::chisq.test(colours)
-#> 
-#> 	Pearson's Chi-squared test
-#> 
-#> data:  colours
-#> X-squared = 138.29, df = 9, p-value < 2.2e-16
-#> 
-
-## Compute correspondence analysis
-X <- ca(colours)
-
-## Plot rows
-viz_rows(X, labels = TRUE)
-
-
-## Plot columns
-viz_columns(X, labels = TRUE)
-
-
-## Get row coordinates
-head(get_coordinates(X, margin = 1))
-#>                  F1          F2           F3  .sup
-#> marron   -0.4921577 -0.08832151  0.021611305 FALSE
-#> noisette -0.2125969  0.16739109 -0.100518284 FALSE
-#> vert      0.1617534  0.33903957  0.087597437 FALSE
-#> bleu      0.5474139 -0.08295428 -0.004709408 FALSE
-
-## Get column coordinates
-head(get_coordinates(X, margin = 2))
-#>                 F1          F2          F3  .sup
-#> brun    -0.5045624 -0.21482046  0.05550909 FALSE
-#> chatain -0.1482527  0.03266635 -0.04880414 FALSE
-#> roux    -0.1295233  0.31964240  0.08315117 FALSE
-#> blond    0.8353478 -0.06957934  0.01621471 FALSE
-
-## Get row distances to centroid
-head(get_distances(X, margin = 1))
-#>     marron   noisette       vert       bleu 
-#> 0.25048691 0.08332116 0.14878530 0.30656555 
-
-## Get row inertias
-head(get_inertia(X, margin = 1))
-#>     marron   noisette       vert       bleu 
-#> 0.09308635 0.01308930 0.01608490 0.11133715 
-
-## Get row contributions
-head(get_contributions(X, margin = 1))
-#>                 F1       F2         F3
-#> marron   43.115744 13.04249  6.6795992
-#> noisette  3.400961 19.80398 61.0855951
-#> vert      1.354851 55.90952 31.9248234
-#> bleu     52.128445 11.24401  0.3099822
-
-## Get eigenvalues
-get_eigenvalues(X)
-#>    eigenvalues  variance cumulative
-#> F1 0.208772652 89.372732   89.37273
-#> F2 0.022226615  9.514911   98.88764
-#> F3 0.002598439  1.112356  100.00000
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/colours.html b/dimensio/dev/reference/colours.html deleted file mode 100644 index 5e0663700..000000000 --- a/dimensio/dev/reference/colours.html +++ /dev/null @@ -1,102 +0,0 @@ - -Colours — colours • dimensio - Skip to contents - - -
-
-
- -
-

Contingency table of eye and hair colours of different individuals.

-
- -
-

Usage

-
colours
-
- -
-

Format

-

A data.frame with 4 columns (hair colours) and 4 rows (eye -colours).

-
-
-

Source

-

Lebart, L., Piron, M. and Morineau, A. Statistique exploratoire -multidimensionnelle: visualisation et inférence en fouille de données. -Paris: Dunod, 2006, p. 170-172

-
-
-

See also

-

Other datasets: -benthos, -countries

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/countries.html b/dimensio/dev/reference/countries.html deleted file mode 100644 index 087042202..000000000 --- a/dimensio/dev/reference/countries.html +++ /dev/null @@ -1,99 +0,0 @@ - -Countries — countries • dimensio - Skip to contents - - -
-
-
- -
-

Student ratings of 13 countries on six attributes.

-
- -
-

Usage

-
countries
-
- -
-

Format

-

A data.frame with 6 columns (attributes) and 13 rows (countries).

-
-
-

Source

-

Greenacre, M. J. Biplots in Practice. Bilbao: Fundación BBVA, 2010.

-
-
-

See also

-

Other datasets: -benthos, -colours

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/dimensio-deprecated.html b/dimensio/dev/reference/dimensio-deprecated.html deleted file mode 100644 index e729cd643..000000000 --- a/dimensio/dev/reference/dimensio-deprecated.html +++ /dev/null @@ -1,213 +0,0 @@ - -Deprecated Functions in dimensio — dimensio-deprecated • dimensio - Skip to contents - - -
-
-
- -
-

These functions still work but will be removed (defunct) in the next version.

-
- -
-

Usage

-
stat_hull(
-  mapping = NULL,
-  data = NULL,
-  geom = "polygon",
-  position = "identity",
-  na.rm = FALSE,
-  show.legend = NA,
-  inherit.aes = TRUE,
-  ...
-)
-
-plot_rows(object, ...)
-
-# S4 method for MultivariateAnalysis
-plot_rows(
-  object,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  alpha = NULL,
-  colour = NULL,
-  fill = NULL,
-  shape = NULL,
-  size = NULL,
-  group = NULL
-)
-
-plot_columns(object, ...)
-
-# S4 method for MultivariateAnalysis
-plot_columns(
-  object,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  alpha = NULL,
-  colour = NULL,
-  fill = NULL,
-  shape = NULL,
-  size = NULL,
-  group = NULL
-)
-
-# S4 method for BootstrapPCA
-plot_columns(
-  object,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  alpha = NULL,
-  colour = NULL,
-  fill = NULL,
-  shape = NULL,
-  size = NULL,
-  group = NULL
-)
-
-plot_individuals(object, ...)
-
-# S4 method for PCA
-plot_individuals(
-  object,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  alpha = NULL,
-  colour = NULL,
-  fill = NULL,
-  shape = NULL,
-  size = NULL,
-  group = NULL
-)
-
-plot_variables(object, ...)
-
-# S4 method for PCA
-plot_variables(
-  object,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  alpha = NULL,
-  colour = NULL,
-  linetype = NULL,
-  size = NULL,
-  group = NULL
-)
-
-plot_variance(object, ...)
-
-# S4 method for MultivariateAnalysis
-plot_variance(
-  object,
-  select = NULL,
-  variance = TRUE,
-  cumulative = TRUE,
-  fill = "grey30",
-  border = "grey10",
-  colour = "red"
-)
-
-plot_contributions(object, ...)
-
-# S4 method for MultivariateAnalysis
-plot_contributions(
-  object,
-  margin = 2,
-  axes = 1,
-  sort = TRUE,
-  decreasing = TRUE,
-  limit = 10,
-  fill = "grey30",
-  border = "grey10"
-)
-
-plot_cos2(object, ...)
-
-# S4 method for MultivariateAnalysis
-plot_cos2(
-  object,
-  margin = 2,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  sort = TRUE,
-  decreasing = TRUE,
-  limit = 10,
-  fill = "grey30",
-  border = "grey10"
-)
-
- - -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/dimensio-package.html b/dimensio/dev/reference/dimensio-package.html deleted file mode 100644 index dea324ec8..000000000 --- a/dimensio/dev/reference/dimensio-package.html +++ /dev/null @@ -1,106 +0,0 @@ - -dimensio: Multivariate Data Analysis — dimensio-package • dimensio - Skip to contents - - -
-
-
- -
-

-

Simple Principal Components Analysis (PCA) and (Multiple) Correspondence Analysis (CA) based on the Singular Value Decomposition (SVD). This package provides S4 classes and methods to compute, extract, summarize and visualize results of multivariate data analysis. It also includes methods for partial bootstrap validation described in Greenacre (1984) <isbn:978-0-12-299050-2> and Lebart et al. (2006) <isbn:978-2-10-049616-7>.

-
- - -
-

Details

- -
Package:dimensio
Type:Package
Version:0.4.1
License:GPL-3
Zenodo:doi:10.5281/zenodo.4478530
- -
-

Author

-

Full list of authors and contributors (alphabetic order)

-
Jean-Baptiste FourvelCNRS, France
Nicolas FrerebeauUniversité Bordeaux Montaigne, France
Brice LebrunUniversité Bordeaux Montaigne, France

Package maintainer

-

Nicolas Frerebeau
nicolas.frerebeau@u-bordeaux-montaigne.fr

-

Archéosciences Bordeaux (UMR 6034)
-Maison de l'Archéologie
-Université Bordeaux Montaigne
-F-33607 Pessac cedex
-France

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/dimnames.html b/dimensio/dev/reference/dimnames.html deleted file mode 100644 index 848f410bb..000000000 --- a/dimensio/dev/reference/dimnames.html +++ /dev/null @@ -1,126 +0,0 @@ - -Dimnames of an Object — dimnames • dimensio - Skip to contents - - -
-
-
- -
-

Retrieve or set the dimnames of an object.

-
- -
-

Usage

-
# S4 method for MultivariateAnalysis
-dim(x)
-
-# S4 method for MultivariateAnalysis
-rownames(x, do.NULL = TRUE, prefix = "row")
-
-# S4 method for MultivariateAnalysis
-colnames(x, do.NULL = TRUE, prefix = "col")
-
-# S4 method for MultivariateAnalysis
-dimnames(x)
-
- -
-

Arguments

-
x
-

An object from which to retrieve the row or column names -(a CA or PCA object).

- - -
do.NULL
-

A logical scalar. If FALSE and names are NULL, names -are created.

- - -
prefix
-

A character string specifying the prefix for created names.

- -
-
-

See also

- -
-
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/figures/README-biplot-1.png b/dimensio/dev/reference/figures/README-biplot-1.png deleted file mode 100644 index db0286fee..000000000 Binary files a/dimensio/dev/reference/figures/README-biplot-1.png and /dev/null differ diff --git a/dimensio/dev/reference/figures/README-plot-ind-1.png b/dimensio/dev/reference/figures/README-plot-ind-1.png deleted file mode 100644 index f8cb9ef5b..000000000 Binary files a/dimensio/dev/reference/figures/README-plot-ind-1.png and /dev/null differ diff --git a/dimensio/dev/reference/figures/README-plot-ind-2.png b/dimensio/dev/reference/figures/README-plot-ind-2.png deleted file mode 100644 index 5702ab5ec..000000000 Binary files a/dimensio/dev/reference/figures/README-plot-ind-2.png and /dev/null differ diff --git a/dimensio/dev/reference/figures/README-plot-var-1.png b/dimensio/dev/reference/figures/README-plot-var-1.png deleted file mode 100644 index 0572f1687..000000000 Binary files a/dimensio/dev/reference/figures/README-plot-var-1.png and /dev/null differ diff --git a/dimensio/dev/reference/figures/README-plot-var-2.png b/dimensio/dev/reference/figures/README-plot-var-2.png deleted file mode 100644 index 6e2771926..000000000 Binary files a/dimensio/dev/reference/figures/README-plot-var-2.png and /dev/null differ diff --git a/dimensio/dev/reference/figures/logo.png b/dimensio/dev/reference/figures/logo.png deleted file mode 100644 index a19b3e7a5..000000000 Binary files a/dimensio/dev/reference/figures/logo.png and /dev/null differ diff --git a/dimensio/dev/reference/get_contributions.html b/dimensio/dev/reference/get_contributions.html deleted file mode 100644 index 8f1975961..000000000 --- a/dimensio/dev/reference/get_contributions.html +++ /dev/null @@ -1,150 +0,0 @@ - -Get Contributions — get_contributions • dimensio - Skip to contents - - -
-
-
- -
-

Get Contributions

-
- -
-

Usage

-
get_contributions(x, ...)
-
-get_correlations(x, ...)
-
-get_cos2(x, ...)
-
-# S4 method for MultivariateAnalysis
-get_contributions(x, margin = 1)
-
-# S4 method for PCA
-get_correlations(x, sup_name = ".sup")
-
-# S4 method for MultivariateAnalysis
-get_cos2(x, margin = 1, sup_name = ".sup")
-
- -
-

Arguments

-
x
-

An object from which to get element(s) (a CA, -MCA or PCA object).

- - -
...
-

Currently not used.

- - -
margin
-

A length-one numeric vector giving the subscript which the -data will be returned: 1 indicates individuals/rows (the default), 2 -indicates variables/columns.

- - -
sup_name
-

A character string specifying the name of the column to -create for supplementary points attribution (see below).

- -
-
-

Value

- - -
  • get_contributions() returns a data.frame of contributions to the -definition of the principal dimensions.

  • -
  • get_correlations() returns a data.frame of correlations between -variables and dimensions (PCA). An extra column (named after sup_name) -is added specifying whether an observation is a supplementary point or -not.

  • -
  • get_cos2() returns a data.frame of \(cos^2\) values (i.e. -quality of the representation of the points on the factor map). An extra -column (named after sup_name) is added specifying whether an observation -is a supplementary point or not.

  • -
-
-

See also

-

Other mutators: -dimnames(), -get_coordinates(), -get_data(), -get_distances(), -get_eigenvalues(), -loadings(), -subset()

-
-
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/get_coordinates.html b/dimensio/dev/reference/get_coordinates.html deleted file mode 100644 index 45b32199d..000000000 --- a/dimensio/dev/reference/get_coordinates.html +++ /dev/null @@ -1,222 +0,0 @@ - -Get Coordinates — get_coordinates • dimensio - Skip to contents - - -
-
-
- -
-

Get Coordinates

-
- -
-

Usage

-
get_coordinates(x, ...)
-
-get_replications(x, ...)
-
-# S4 method for MultivariateAnalysis
-get_coordinates(x, margin = 1, principal = TRUE, sup_name = ".sup")
-
-# S4 method for MultivariateBootstrap
-get_replications(x, margin = 1)
-
-# S4 method for BootstrapPCA
-get_replications(x)
-
- -
-

Arguments

-
x
-

An object from which to get element(s) (a CA, -MCA or PCA object).

- - -
...
-

Currently not used.

- - -
margin
-

A length-one numeric vector giving the subscript which the -data will be returned: 1 indicates individuals/rows (the default), 2 -indicates variables/columns.

- - -
principal
-

A logical scalar: should principal coordinates be -returned? If FALSE, standard coordinates are returned.

- - -
sup_name
-

A character string specifying the name of the column to -create for supplementary points attribution (see below).

- -
-
-

Value

- - -
  • get_coordinates() returns a data.frame of coordinates. An extra -column (named after sup_name) is added specifying whether an observation -is a supplementary point or not.

  • -
  • get_replications() returns an array of coordinates.

  • -
-
-

See also

- -
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE, sup_row = 5:10)
-#> 1 qualitative variable was removed: Species.
-
-## Get row principal coordinates
-head(get_coordinates(X, margin = 1, principal = TRUE))
-#>           F1         F2          F3  .sup
-#> 1  -2.385846  0.5084067 -0.12383101 FALSE
-#> 2  -2.215654 -0.6515155 -0.23313750 FALSE
-#> 3  -2.496566 -0.3169280  0.04974232 FALSE
-#> 4  -2.433607 -0.5744432  0.09690301 FALSE
-#> 11 -2.279483  1.0742447 -0.26629760 FALSE
-#> 12 -2.450871  0.1591839  0.09988982 FALSE
-
-## Get row standard coordinates
-head(get_coordinates(X, margin = 1, principal = FALSE))
-#>           F1         F2         F3  .sup
-#> 1  -1.403075  0.5268995 -0.3142569 FALSE
-#> 2  -1.302987 -0.6752138 -0.5916536 FALSE
-#> 3  -1.468187 -0.3284560  0.1262355 FALSE
-#> 4  -1.431162 -0.5953380  0.2459193 FALSE
-#> 11 -1.340525  1.1133193 -0.6758069 FALSE
-#> 12 -1.441315  0.1649741  0.2534992 FALSE
-
-## Tidy principal coordinates
-head(tidy(X, margin = 1))
-#>   label component supplementary coordinate contribution        cos2
-#> 1     1        F1         FALSE -2.3858463   1.36709655 0.954033073
-#> 2     1        F2         FALSE  0.5084067   0.19279380 0.043321256
-#> 3     1        F3         FALSE -0.1238310   0.06858151 0.002570025
-#> 4    10        F1          TRUE -2.3173283           NA 0.953213276
-#> 5    10        F2          TRUE -0.4448514           NA 0.035127301
-#> 6    10        F3          TRUE -0.2525218           NA 0.011319124
-head(tidy(X, margin = 2))
-#>          label component supplementary coordinate contribution         cos2
-#> 1 Petal.Length        F1         FALSE 0.99121597  33.97921607 0.9825091061
-#> 2 Petal.Length        F2         FALSE 0.01655680   0.02944324 0.0002741275
-#> 3 Petal.Length        F3         FALSE 0.05477927   1.93260521 0.0030007681
-#> 4  Petal.Width        F1         FALSE 0.96350955  32.10619376 0.9283506618
-#> 5  Petal.Width        F2         FALSE 0.05756108   0.35586957 0.0033132775
-#> 6  Petal.Width        F3         FALSE 0.24948796  40.08758618 0.0622442430
-
-head(augment(X, margin = 1, axes = c(1, 2)))
-#>          F1         F2 label supplementary        mass      sum contribution
-#> 1 -2.385846  0.5084067     1         FALSE 0.006944444 5.950740     4.132458
-#> 2 -2.215654 -0.6515155     2         FALSE 0.006944444 5.333593     3.703884
-#> 3 -2.496566 -0.3169280     3         FALSE 0.006944444 6.333284     4.398114
-#> 4 -2.433607 -0.5744432     4         FALSE 0.006944444 6.252426     4.341962
-#> 5 -2.279483  1.0742447    11         FALSE 0.006944444 6.350046     4.409754
-#> 6 -2.450871  0.1591839    12         FALSE 0.006944444 6.032107     4.188963
-#>        cos2
-#> 1 0.9973543
-#> 2 0.9880287
-#> 3 0.9995093
-#> 4 0.9977072
-#> 5 0.9889258
-#> 6 0.9951651
-head(augment(X, margin = 2, axes = c(1, 2)))
-#>           F1         F2        label supplementary mass       sum contribution
-#> 1  0.8875399 0.36087785 Sepal.Length         FALSE    1 0.9179599     91.79599
-#> 2 -0.4392190 0.89286998  Sepal.Width         FALSE    1 0.9901302     99.01302
-#> 3  0.9912160 0.01655680 Petal.Length         FALSE    1 0.9827832     98.27832
-#> 4  0.9635096 0.05756108  Petal.Width         FALSE    1 0.9316639     93.16639
-#>        cos2
-#> 1 0.9179599
-#> 2 0.9901302
-#> 3 0.9827832
-#> 4 0.9316639
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/get_data.html b/dimensio/dev/reference/get_data.html deleted file mode 100644 index 01d60efae..000000000 --- a/dimensio/dev/reference/get_data.html +++ /dev/null @@ -1,120 +0,0 @@ - -Get Original Data — get_data • dimensio - Skip to contents - - -
-
-
- -
-

Get Original Data

-
- -
-

Usage

-
get_data(x, ...)
-
-# S4 method for MultivariateAnalysis
-get_data(x)
-
- -
-

Arguments

-
x
-

An object from which to get element(s) (a CA, -MCA or PCA object).

- - -
...
-

Currently not used.

- -
-
-

Value

- - -

Returns a data.frame of original data.

-
-
-

See also

- -
-
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/get_distances.html b/dimensio/dev/reference/get_distances.html deleted file mode 100644 index 0bc61d6fd..000000000 --- a/dimensio/dev/reference/get_distances.html +++ /dev/null @@ -1,126 +0,0 @@ - -Get Distances — get_distances • dimensio - Skip to contents - - -
-
-
- -
-

Get Distances

-
- -
-

Usage

-
get_distances(x, ...)
-
-# S4 method for MultivariateAnalysis
-get_distances(x, margin = 1)
-
- -
-

Arguments

-
x
-

An object from which to get element(s) (a CA, -MCA or PCA object).

- - -
...
-

Currently not used.

- - -
margin
-

A length-one numeric vector giving the subscript which the -data will be returned: 1 indicates individuals/rows (the default), 2 -indicates variables/columns.

- -
-
-

Value

- - -

A numeric vector of squared distance to the centroide.

-
-
-

See also

- -
-
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/get_eigenvalues.html b/dimensio/dev/reference/get_eigenvalues.html deleted file mode 100644 index 4691f42e0..000000000 --- a/dimensio/dev/reference/get_eigenvalues.html +++ /dev/null @@ -1,146 +0,0 @@ - -Get Eigenvalues — get_eigenvalues • dimensio - Skip to contents - - -
-
-
- -
-

Get Eigenvalues

-
- -
-

Usage

-
get_eigenvalues(x)
-
-get_inertia(x, ...)
-
-get_variance(x, ...)
-
-# S4 method for MultivariateAnalysis
-get_eigenvalues(x)
-
-# S4 method for MultivariateAnalysis
-get_inertia(x, margin = 1)
-
-# S4 method for MultivariateAnalysis
-get_variance(x, digits = 2)
-
- -
-

Arguments

-
x
-

An object from which to get element(s) (a CA, -MCA or PCA object).

- - -
...
-

Currently not used.

- - -
margin
-

A length-one numeric vector giving the subscript which the -data will be returned: 1 indicates individuals/rows (the default), 2 -indicates variables/columns.

- - -
digits
-

An integer indicating the number of decimal places to be -used.

- -
-
-

Value

- - -
  • get_eigenvalues() returns a data.frame with the following columns: -eigenvalues, variance (percentage of variance) and cumulative -(cumulative percentage of variance).

  • -
  • get_variance() returns a numeric vector giving the percentage of -explained variance of each dimension.

  • -
  • get_inertia() returns a numeric vector.

  • -
-
-

See also

- -
-
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/index.html b/dimensio/dev/reference/index.html deleted file mode 100644 index 32f9be18a..000000000 --- a/dimensio/dev/reference/index.html +++ /dev/null @@ -1,286 +0,0 @@ - -Function reference • dimensio - Skip to contents - - -
-
-
- -
-

Analysis

- - - - -
- - - - -
- - ca() -
-
Correspondence Analysis
-
- - mca() -
-
Multiple Correspondence Analysis
-
- - pca() -
-
Principal Components Analysis
-
- - predict(<CA>) predict(<PCA>) -
-
Predict New Coordinates
-
-

Resampling

- - - - -
- - - - -
- - bootstrap(<CA>) bootstrap(<PCA>) -
-
Partial Bootstrap Analysis
-
-

Visualization

- - - - -
- - - - -
- - biplot(<CA>) biplot(<PCA>) -
-
Biplot
-
- - screeplot(<MultivariateAnalysis>) -
-
Scree Plot
-
- - viz_contributions() viz_cos2() -
-
Visualize Contributions and cos2
-
- - viz_individuals() viz_rows() -
-
Visualize Individuals Factor Map
-
- - viz_variables() viz_columns() -
-
Visualize Variables Factor Map
-
- - viz_hull() viz_confidence() viz_tolerance() -
-
Plot Envelopes
-
- - wrap_hull() wrap_confidence() wrap_tolerance() -
-
Wrap Observations
-
-

Summary

- - - - -
- - - - -
- - summary(<CA>) summary(<PCA>) -
-
Object Summaries
-
- - tidy() augment() -
-
Tidy Coordinates
-
-

Getters and Setters

- - - - -
- - - - -
- - dim(<MultivariateAnalysis>) rownames(<MultivariateAnalysis>) colnames(<MultivariateAnalysis>) dimnames(<MultivariateAnalysis>) -
-
Dimnames of an Object
-
- - get_contributions() get_correlations() get_cos2() -
-
Get Contributions
-
- - get_coordinates() get_replications() -
-
Get Coordinates
-
- - get_data() -
-
Get Original Data
-
- - get_distances() -
-
Get Distances
-
- - get_eigenvalues() get_inertia() get_variance() -
-
Get Eigenvalues
-
- - loadings(<PCA>) -
-
Extract Loadings
-
- - `[[`(<CA>,<ANY>,<missing>) `[[`(<PCA>,<ANY>,<missing>) -
-
Extract Parts of an Object
-
-

Tools

- - - - -
- - - - -
- - burt() -
-
Burt Table
-
- - cdt() -
-
Complete Disjunctive Table
-
-

Datasets

- - - - -
- - - - -
- - benthos -
-
Benthos
-
- - colours -
-
Colours
-
- - countries -
-
Countries
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/loadings.html b/dimensio/dev/reference/loadings.html deleted file mode 100644 index 72c8d4e16..000000000 --- a/dimensio/dev/reference/loadings.html +++ /dev/null @@ -1,119 +0,0 @@ - -Extract Loadings — loadings • dimensio - Skip to contents - - -
-
-
- -
-

Extract loadingsin principal components analysis.

-
- -
-

Usage

-
# S4 method for PCA
-loadings(x)
-
- -
-

Arguments

-
x
-

A PCA object.

- -
-
-

Value

- - -

Returns variable loadings (i.e. the coefficients of the linear combination -of the original variables).

-
-
-

Note

-

loadings() is only implemented for consistency with -[stats][stats::loadings].

-
-
-

See also

- -
-
-

Author

-

N. Frerebeau

-
- -
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/pca.html b/dimensio/dev/reference/pca.html deleted file mode 100644 index b1806e4a2..000000000 --- a/dimensio/dev/reference/pca.html +++ /dev/null @@ -1,225 +0,0 @@ - -Principal Components Analysis — pca • dimensio - Skip to contents - - -
-
-
- -
-

Computes a principal components analysis based on the singular value -decomposition.

-
- -
-

Usage

-
pca(object, ...)
-
-# S4 method for data.frame
-pca(
-  object,
-  center = TRUE,
-  scale = TRUE,
-  rank = NULL,
-  sup_row = NULL,
-  sup_col = NULL,
-  weight_row = NULL,
-  weight_col = NULL
-)
-
-# S4 method for matrix
-pca(
-  object,
-  center = TRUE,
-  scale = TRUE,
-  rank = NULL,
-  sup_row = NULL,
-  sup_col = NULL,
-  weight_row = NULL,
-  weight_col = NULL
-)
-
- -
-

Arguments

-
object
-

A \(m \times p\) numeric matrix or a -data.frame.

- - -
...
-

Currently not used.

- - -
center
-

A logical scalar: should the variables be shifted to be -zero centered?

- - -
scale
-

A logical scalar: should the variables be scaled to unit -variance?

- - -
rank
-

An integer value specifying the maximal number of components -to be kept in the results. If NULL (the default), \(p - 1\) components -will be returned.

- - -
sup_row
-

A vector specifying the indices of the supplementary rows.

- - -
sup_col
-

A vector specifying the indices of the supplementary columns.

- - -
weight_row
-

A numeric vector specifying the active row (individual) -weights. If NULL (the default), uniform weights are used. Row weights are -internally normalized to sum 1

- - -
weight_col
-

A numeric vector specifying the active column -(variable) weights. If NULL (the default), uniform weights (1) are -used.

- -
-
-

Value

- - -

A PCA object.

-
-
-

References

-

Lebart, L., Piron, M. and Morineau, A. Statistique exploratoire -multidimensionnelle: visualisation et inférence en fouille de données. -Paris: Dunod, 2006.

-
-
-

See also

-

svd()

-

Other multivariate analysis: -ca(), -mca(), -predict()

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE, sup_row = sample(150, 10), sup_col = 2)
-#> 1 qualitative variable was removed: Species.
-
-## Get row coordinates
-head(get_coordinates(X, margin = 1))
-#>          F1          F2  .sup
-#> 1 -2.079218  0.29865902 FALSE
-#> 2 -2.217337  0.09684061 FALSE
-#> 3 -2.389419 -0.08978021 FALSE
-#> 7 -2.348014 -0.27354012 FALSE
-#> 8 -2.114316  0.18255224 FALSE
-#> 9 -2.562635 -0.40770540 FALSE
-
-## Get column coordinates
-head(get_coordinates(X, margin = 2))
-#>                      F1         F2  .sup
-#> Sepal.Length  0.9277166  0.3723421 FALSE
-#> Petal.Length  0.9835384 -0.1208904 FALSE
-#> Petal.Width   0.9657049 -0.2345722 FALSE
-#> Sepal.Width  -0.3356727  0.4451266  TRUE
-
-## Get correlations between variables and dimensions
-head(get_correlations(X))
-#>                      F1         F2  .sup
-#> Sepal.Length  0.9277166  0.3723421 FALSE
-#> Petal.Length  0.9835384 -0.1208904 FALSE
-#> Petal.Width   0.9657049 -0.2345722 FALSE
-#> Sepal.Width  -0.3356727  0.4451266  TRUE
-
-## Get eigenvalues
-get_eigenvalues(X)
-#>    eigenvalues  variance cumulative
-#> F1   2.7605919 92.984627   92.98463
-#> F2   0.2082772  7.015373  100.00000
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/predict.html b/dimensio/dev/reference/predict.html deleted file mode 100644 index 9bfc89858..000000000 --- a/dimensio/dev/reference/predict.html +++ /dev/null @@ -1,182 +0,0 @@ - -Predict New Coordinates — predict • dimensio - Skip to contents - - -
-
-
- -
-

Predict the projection of new individuals/rows or variables/columns.

-
- -
-

Usage

-
# S4 method for CA
-predict(object, newdata, margin = 1)
-
-# S4 method for PCA
-predict(object, newdata, margin = 1)
-
- -
-

Arguments

-
object
-

A CA or PCA object.

- - -
newdata
-

An object of supplementary points coercible to a -matrix for which to compute principal coordinates.

- - -
margin
-

A length-one numeric vector giving the subscript which the -data will be predicted: 1 indicates individuals/rows (the default), 2 -indicates variables/columns.

- -
-
-

Value

- - -

A data.frame of coordinates.

-
-
-

See also

-

Other multivariate analysis: -ca(), -mca(), -pca()

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Create a matrix
-A <- matrix(data = sample(1:10, 100, TRUE), nrow = 10, ncol = 10)
-
-## Compute correspondence analysis
-X <- ca(A, sup_row = 8:10, sup_col = 7:10)
-
-## Predict new row coordinates
-Y <- matrix(data = sample(1:10, 120, TRUE), nrow = 20, ncol = 6)
-predict(X, Y, margin = 1)
-#>             F1            F2          F3           F4           F5
-#> 1   0.24278415  0.4153749728  0.07257390 -0.097383675  0.118922779
-#> 2  -0.47216906  0.1153913614 -0.01789554 -0.075059344  0.093455638
-#> 3   0.49079198  0.1847260892  0.23802123 -0.177001312 -0.140452292
-#> 4  -0.11097712 -0.3802202818 -0.15402983  0.337133180  0.111773585
-#> 5  -0.19826077  0.2666014838 -0.10139952 -0.020183831  0.091185798
-#> 6   0.08040509 -0.0498662832 -0.15737951  0.315663726 -0.024124961
-#> 7   0.10659921 -0.0005990011  0.04768837 -0.075444307  0.203960072
-#> 8  -0.28254580 -0.2176888085 -0.09217525  0.157057442  0.191688505
-#> 9   0.34957249  0.0066677001  0.14511333  0.001687393 -0.443038476
-#> 10 -0.36820316  0.3259796703  0.22053979  0.158327509 -0.015726437
-#> 11  0.33172872 -0.6377648437  0.04015996 -0.223340171 -0.290311143
-#> 12 -0.22590087  0.3273022479 -0.00919882 -0.484000025 -0.071073320
-#> 13  0.30516764 -0.2733804680  0.45898982  0.487206057 -0.047877940
-#> 14 -0.18882878  0.0916783260 -0.14459880 -0.108216350 -0.034722903
-#> 15  0.17613277  0.2834408751  0.20501039  0.208716789  0.438267971
-#> 16 -0.07265103  0.0548121102  0.35856644  0.034730071 -0.217258859
-#> 17  0.16882833  0.3624723330 -0.04259558  0.209204614  0.079426707
-#> 18 -0.18255261 -0.0891678661  0.10984542 -0.093106411  0.303157527
-#> 19  0.21728633 -0.1274478305 -0.22935147  0.207323269 -0.005307477
-#> 20  0.29045760  0.3602251332  0.44401923  0.329927074  0.440654190
-
-## Predict new column coordinates
-Z <- matrix(data = sample(1:10, 140, TRUE), nrow = 7, ncol = 20)
-predict(X, Z, margin = 2)
-#>             F1          F2           F3           F4          F5
-#> 1   0.40103075 -0.43485840  0.370745120 -0.187316175 -0.14236763
-#> 2  -0.06073891 -0.06502427 -0.006173824  0.009009563 -0.23330581
-#> 3   0.41479055 -0.26211354  0.114708621 -0.229117308 -0.21233212
-#> 4  -0.27594192  0.25998065  0.021008376 -0.028977667 -0.29700550
-#> 5  -0.04007132 -0.59571024  0.440569341 -0.143853971  0.21379966
-#> 6   0.29826155 -0.55763938  0.379375075 -0.007750335 -0.34664509
-#> 7  -0.20615276 -0.11574713  0.196243912 -0.126638903  0.36689381
-#> 8  -0.05066656 -0.24692063  0.101953988  0.068454382 -0.17059727
-#> 9   0.61902103  0.12792093 -0.037727946 -0.208935670 -0.52620099
-#> 10  0.04333604 -0.23346100  0.412008487  0.080158289 -0.18081302
-#> 11  0.20014141  0.08229970  0.426963531 -0.049447468 -0.26821297
-#> 12  0.23098480 -0.28265471  0.260298508 -0.345082249 -0.17182670
-#> 13 -0.33037429 -0.08670636  0.103794993  0.230594074 -0.46486930
-#> 14  0.14002613 -0.48733471  0.035548246 -0.066758475 -0.21346143
-#> 15  0.39621018  0.21986498 -0.156959357 -0.255086340 -0.05148005
-#> 16  0.24977291 -0.14219109  0.053729554 -0.190876567  0.13851718
-#> 17  0.05746184 -0.20561334  0.246529312 -0.248951879 -0.40185774
-#> 18 -0.39608793 -0.26271245  0.457060688 -0.042555663 -0.54216706
-#> 19  0.12518398 -0.10783761  0.058677248 -0.171676457 -0.24709415
-#> 20  0.23176652 -0.65093796  0.110309109 -0.418312438 -0.16535564
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/screeplot-1.png b/dimensio/dev/reference/screeplot-1.png deleted file mode 100644 index e2ca92b1b..000000000 Binary files a/dimensio/dev/reference/screeplot-1.png and /dev/null differ diff --git a/dimensio/dev/reference/screeplot-2.png b/dimensio/dev/reference/screeplot-2.png deleted file mode 100644 index 7d027f3f6..000000000 Binary files a/dimensio/dev/reference/screeplot-2.png and /dev/null differ diff --git a/dimensio/dev/reference/screeplot.html b/dimensio/dev/reference/screeplot.html deleted file mode 100644 index 5e82794fb..000000000 --- a/dimensio/dev/reference/screeplot.html +++ /dev/null @@ -1,182 +0,0 @@ - -Scree Plot — screeplot • dimensio - Skip to contents - - -
-
-
- -
-

Plot eigenvalues (scree plot) or variances histogram.

-
- -
-

Usage

-
# S4 method for MultivariateAnalysis
-screeplot(
-  x,
-  ...,
-  eigenvalues = FALSE,
-  cumulative = FALSE,
-  labels = TRUE,
-  limit = 10,
-  col = "grey90",
-  border = "grey10",
-  col.cumulative = "red",
-  lty.cumulative = "solid",
-  lwd.cumulative = 2
-)
-
- -
-

Arguments

-
x
-

A CA, MCA or PCA object.

- - -
...
-

Extra parameters to be passed to graphics::barplot().

- - -
eigenvalues
-

A logical scalar: should the eigenvalues be plotted -instead of variance/inertia?

- - -
cumulative
-

A logical scalar: should the cumulative percentages of -variance be plotted?

- - -
labels
-

A logical scalar: should text labels be drawn on top of -bars?

- - -
limit
-

An integer specifying the number of top elements to be -displayed.

- - -
col, border
-

A character string specifying the bars infilling and -border colors.

- - -
col.cumulative
-

A specification for the line color.

- - -
lty.cumulative
-

A specification for the line type.

- - -
lwd.cumulative
-

A specification for the line width.

- -
-
-

Value

- - -

screeplot() is called for its side-effects: it results in a graphic -being displayed. Invisibly returns x.

-
-
-

See also

-

Other plot methods: -biplot(), -viz_contributions(), -viz_individuals(), -viz_variables(), -viz_wrap, -wrap

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE)
-#> 1 qualitative variable was removed: Species.
-
-## Screeplot
-screeplot(X)
-
-screeplot(X, cumulative = TRUE)
-
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/subset.html b/dimensio/dev/reference/subset.html deleted file mode 100644 index 293b346dd..000000000 --- a/dimensio/dev/reference/subset.html +++ /dev/null @@ -1,707 +0,0 @@ - -Extract Parts of an Object — subset • dimensio - Skip to contents - - -
-
-
- -
-

Operators acting on objects to extract parts.

-
- -
-

Usage

-
# S4 method for CA,ANY,missing
-[[(x, i)
-
-# S4 method for PCA,ANY,missing
-[[(x, i)
-
- -
-

Arguments

-
x
-

An object from which to extract element(s) or in which to replace -element(s).

- - -
i
-

A character string specifying elements to extract. -Any unambiguous substring can be given (see details).

- -
-
-

Value

- - -

A list.

-
-
-

Details

-

If i is "data", returns a list with the following elements:

data
-

A numeric matrix of raw data.

- -
mean
-

A numeric vector giving the variables means (PCA).

- -
sd
-

A numeric vector giving the variables standard deviations -(PCA).

- - -

If i is "rows", returns a list with the following elements:

coord
-

A numeric matrix of rows/individuals coordinates.

- -
cos2
-

A numeric matrix of rows/individuals squared cosine.

- -
masses
-

A numeric vector giving the rows masses/individual -weights.

- -
sup
-

A logical vector specifying whether a point is a -supplementary observation or not.

- - -

If i is "columns", returns a list with the following elements:

coord
-

A numeric matrix of columns/variables coordinates.

- -
cor
-

A numeric matrix of correlation between variables and -the dimensions (PCA).

- -
cos2
-

A numeric matrix of columns/variables squared cosine.

- -
masses
-

A numeric vector giving the columns masses/variable -weights.

- -
sup
-

A logical vector specifying whether a point is a -supplementary observation or not.

- - -

If i is "eigenvalues", returns a numeric vector of eigenvalues.

-
-
-

See also

- -
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE, sup_row = 8:10, sup_col = 1)
-#> 1 qualitative variable was removed: Species.
-
-## Get results for the individuals
-X[["rows"]]
-#> $coordinates
-#>             F1           F2
-#> 1   -2.1799607  0.107860619
-#> 2   -1.6996139 -0.926588874
-#> 3   -1.9288393 -0.527485410
-#> 4   -1.7585967 -0.705022642
-#> 5   -2.2760301  0.314750517
-#> 6   -2.2841520  1.069266219
-#> 7   -1.9994783 -0.054120776
-#> 11  -2.3350128  0.536316749
-#> 12  -2.0097181 -0.069676614
-#> 13  -1.7840271 -0.971497378
-#> 14  -1.8952870 -1.015526377
-#> 15  -2.7344808  1.112957446
-#> 16  -2.8386721  2.074363046
-#> 17  -2.4324986  1.010560888
-#> 18  -2.0955476  0.152769123
-#> 19  -2.2724958  0.817467817
-#> 20  -2.3466691  0.788115151
-#> 21  -1.9726315 -0.055000281
-#> 22  -2.1661866  0.626133757
-#> 23  -2.4243767  0.256045186
-#> 24  -1.6233228 -0.127164668
-#> 25  -1.8984582 -0.025647615
-#> 26  -1.6254407 -0.897236208
-#> 27  -1.8408919  0.020140394
-#> 28  -2.1428741  0.122536952
-#> 29  -2.0838914 -0.099029280
-#> 30  -1.8175794 -0.483456411
-#> 31  -1.7215100 -0.690346310
-#> 32  -1.8779785  0.005464061
-#> 33  -2.8037034  1.318967839
-#> 34  -2.8524463  1.556089908
-#> 35  -1.7585967 -0.705022642
-#> 36  -1.9659259 -0.542161743
-#> 37  -2.2170474  0.093184286
-#> 38  -2.3604432  0.269842013
-#> 39  -1.7367006 -0.941265207
-#> 40  -2.0468047 -0.084352947
-#> 41  -2.1326343  0.138092790
-#> 42  -0.9798020 -2.344585993
-#> 43  -1.9288393 -0.527485410
-#> 44  -1.7681350  0.316847300
-#> 45  -2.1139094  0.891728987
-#> 46  -1.6152008 -0.881680370
-#> 47  -2.3939955  0.757882980
-#> 48  -1.8917527 -0.512809077
-#> 49  -2.3350128  0.536316749
-#> 50  -1.9878220 -0.305919178
-#> 51   0.3450638  0.510411957
-#> 52   0.3553036  0.525967795
-#> 53   0.5997195  0.377783228
-#> 54   0.8656684 -1.499239964
-#> 55   0.7766677 -0.286915466
-#> 56   0.5707548 -0.391408807
-#> 57   0.4178206  0.807118863
-#> 58   0.2567533 -1.529809908
-#> 59   0.5117721 -0.169842576
-#> 60   0.5287175 -0.641448199
-#> 61   0.7152040 -2.328016836
-#> 62   0.4361824  0.068158999
-#> 63   0.7084985 -1.840855375
-#> 64   0.6332719 -0.110257739
-#> 65   0.1409057 -0.316605905
-#> 66   0.3298732  0.259493060
-#> 67   0.5474423  0.112187998
-#> 68   0.2652383 -0.791729549
-#> 69   1.3159972 -1.542931190
-#> 70   0.4676168 -1.189953508
-#> 71   0.7198029  0.704722305
-#> 72   0.3853216 -0.464790472
-#> 73   1.1761357 -0.863556163
-#> 74   0.5605150 -0.406964645
-#> 75   0.4005122 -0.213871574
-#> 76   0.4259426  0.052603161
-#> 77   0.7664279 -0.302471304
-#> 78   0.9017017  0.275386670
-#> 79   0.6435117 -0.094701901
-#> 80   0.1387878 -1.086677445
-#> 81   0.5265996 -1.411519740
-#> 82   0.4050998 -1.471104576
-#> 83   0.3598912 -0.731265207
-#> 84   1.1425834 -0.375515196
-#> 85   0.5474423  0.112187998
-#> 86   0.2475780  0.984656096
-#> 87   0.5255462  0.348430562
-#> 88   1.0140150 -1.440534633
-#> 89   0.2302695 -0.036334342
-#> 90   0.6735297 -1.085460167
-#> 91   0.6413938 -0.864773441
-#> 92   0.5001159  0.081955827
-#> 93   0.4930472 -0.923478773
-#> 94   0.3528226 -1.736699807
-#> 95   0.5555643 -0.642327704
-#> 96   0.1829431 -0.066566513
-#> 97   0.3634255 -0.228547907
-#> 98   0.4005122 -0.213871574
-#> 99   0.1338371 -1.322040504
-#> 100  0.4224083 -0.450114139
-#> 101  1.6596649  1.402087727
-#> 102  1.3958227 -0.240789684
-#> 103  1.5731339  0.587107682
-#> 104  1.3047041  0.201463273
-#> 105  1.6204604  0.617339853
-#> 106  1.8327404  0.689842013
-#> 107  1.1966153 -0.832444487
-#> 108  1.5643105  0.304197604
-#> 109  1.7631548 -0.596743655
-#> 110  1.4085435  2.037433755
-#> 111  0.9998890  0.838568312
-#> 112  1.4699960 -0.211437019
-#> 113  1.4247874  0.528402351
-#> 114  1.6352879 -0.624337311
-#> 115  1.7218189  0.190642734
-#> 116  1.3273016  1.002646490
-#> 117  1.1715481  0.393676839
-#> 118  1.1856853  2.404546038
-#> 119  2.4971040 -0.003871575
-#> 120  1.5014304 -1.469549526
-#> 121  1.4756482  1.061351821
-#> 122  1.3099931 -0.018343948
-#> 123  1.9775527  0.245830045
-#> 124  1.2372363 -0.315050854
-#> 125  1.2107526  1.178424712
-#> 126  1.1648425  0.880838301
-#> 127  1.1040803 -0.122837289
-#> 128  0.9490282  0.305618841
-#> 129  1.6540127  0.129298887
-#> 130  1.1139818  0.347888830
-#> 131  1.6706197  0.112863543
-#> 132  0.9055992  2.270700031
-#> 133  1.7384258  0.174207390
-#> 134  0.9621009 -0.213533802
-#> 135  1.2552597 -0.598840438
-#> 136  1.8161334  0.706277356
-#> 137  1.3308359  1.505363789
-#> 138  1.0754787  0.600566737
-#> 139  0.9119416  0.290942508
-#> 140  1.2916314  0.720615916
-#> 141  1.6190440  0.884694094
-#> 142  1.3491977  0.766403925
-#> 143  1.3958227 -0.240789684
-#> 144  1.5498214  1.090704487
-#> 145  1.5484050  1.358058728
-#> 146  1.4823537  0.574190360
-#> 147  1.5508748 -0.669245814
-#> 148  1.2291144  0.439464848
-#> 149  1.1722495  1.431102620
-#> 150  1.0232015  0.334971507
-#> 8   -2.0468047 -0.084352947
-#> 9   -1.6035446 -1.133478772
-#> 10  -1.8430098 -0.749931146
-#> 
-#> $contributions
-#>              F1           F2
-#> 1   1.453343684 0.0106993487
-#> 2   0.883428800 0.7895973615
-#> 3   1.137792525 0.2558894786
-#> 4   0.945809064 0.4571278240
-#> 5   1.584261926 0.0911096611
-#> 6   1.595588876 1.0514853344
-#> 7   1.222656219 0.0026937641
-#> 11  1.667437334 0.2645295822
-#> 12  1.235211341 0.0044648369
-#> 13  0.973360803 0.8679901399
-#> 14  1.098552806 0.9484489111
-#> 15  2.286760836 1.1391702764
-#> 16  2.464344658 3.9573190026
-#> 17  1.809573309 0.9391965689
-#> 18  1.342969212 0.0214636064
-#> 19  1.579345535 0.6145721192
-#> 20  1.684126390 0.5712298316
-#> 21  1.190043653 0.0027820270
-#> 22  1.435035728 0.3605502185
-#> 23  1.797509409 0.0602927030
-#> 24  0.805899240 0.0148718312
-#> 25  1.102232091 0.0006049584
-#> 26  0.808003463 0.7403636858
-#> 27  1.036400344 0.0003730503
-#> 28  1.404314222 0.0138091094
-#> 29  1.328070529 0.0090190079
-#> 30  1.010317225 0.2149543180
-#> 31  0.906337800 0.4382940161
-#> 32  1.078579659 0.0000274576
-#> 33  2.404003572 1.5999261560
-#> 34  2.488318246 2.2269009410
-#> 35  0.945809064 0.4571278240
-#> 36  1.181966834 0.2703268996
-#> 37  1.503214416 0.0079857717
-#> 38  1.703954895 0.0669654302
-#> 39  0.922403375 0.8148084750
-#> 40  1.281220300 0.0065438305
-#> 41  1.390925123 0.0175377362
-#> 42  0.293594279 5.0554970160
-#> 43  1.137792525 0.2558894786
-#> 44  0.956096741 0.0923276004
-#> 45  1.366607256 0.7313028984
-#> 46  0.797855133 0.7149141115
-#> 47  1.752740637 0.5282455348
-#> 48  1.094459487 0.2418482414
-#> 49  1.667437334 0.2645295822
-#> 50  1.208442464 0.0860686388
-#> 51  0.036414113 0.2395924925
-#> 52  0.038607369 0.2544191706
-#> 53  0.109993587 0.1312553072
-#> 54  0.229178638 2.0671587361
-#> 55  0.184476671 0.0757075942
-#> 56  0.099625421 0.1408940695
-#> 57  0.053388873 0.5991099343
-#> 58  0.020160574 2.1523181354
-#> 59  0.080098468 0.0265292309
-#> 60  0.085490582 0.3784031185
-#> 61  0.156433881 4.9842952461
-#> 62  0.058184494 0.0042724593
-#> 63  0.153514287 3.1165268007
-#> 64  0.122645427 0.0111802030
-#> 65  0.006071949 0.0921869714
-#> 66  0.033278603 0.0619274246
-#> 67  0.091653220 0.0115750885
-#> 68  0.021515104 0.5764813136
-#> 69  0.529640167 2.1893976274
-#> 70  0.066873073 1.3022414468
-#> 71  0.158452140 0.4567384375
-#> 72  0.045406471 0.1986762522
-#> 73  0.423044289 0.6858240370
-#> 74  0.096082758 0.1523157768
-#> 75  0.049057166 0.0420666239
-#> 76  0.055484680 0.0025448091
-#> 77  0.179644343 0.0841394918
-#> 78  0.248654774 0.0697456870
-#> 79  0.126643778 0.0082480050
-#> 80  0.005890792 1.0860075196
-#> 81  0.084807053 1.8323373666
-#> 82  0.050187444 1.9903003497
-#> 83  0.039610792 0.4917918728
-#> 84  0.399251696 0.1296840484
-#> 85  0.091653220 0.0115750885
-#> 86  0.018745415 0.8916628530
-#> 87  0.084468126 0.1116513580
-#> 88  0.314455886 1.9084418605
-#> 89  0.016216010 0.0012141326
-#> 90  0.138734505 1.0835758275
-#> 91  0.125811545 0.6877588893
-#> 92  0.076491334 0.0061771934
-#> 93  0.074344362 0.7843056805
-#> 94  0.038070081 2.7738376469
-#> 95  0.094392957 0.3794415052
-#> 96  0.010235356 0.0040751457
-#> 97  0.040392607 0.0480381224
-#> 98  0.049057166 0.0420666239
-#> 99  0.005478023 1.6073892100
-#> 100 0.054567719 0.1863274482
-#> 101 0.842387320 1.8079312085
-#> 102 0.595842510 0.0533221045
-#> 103 0.756837054 0.3170056865
-#> 104 0.520589025 0.0373270182
-#> 105 0.803059702 0.3504936509
-#> 106 1.027242319 0.4376539041
-#> 107 0.437905211 0.6372973156
-#> 108 0.748370960 0.0851026540
-#> 109 0.950718311 0.3274968644
-#> 110 0.606752411 3.8176711884
-#> 111 0.305755696 0.6467082790
-#> 112 0.660850565 0.0411143642
-#> 113 0.620827724 0.2567798899
-#> 114 0.817823172 0.3584842707
-#> 115 0.906663024 0.0334250480
-#> 116 0.538778450 0.9245431850
-#> 117 0.419750477 0.1425316314
-#> 118 0.429941982 5.3173802664
-#> 119 1.906971687 0.0000137850
-#> 120 0.689416059 1.9860948268
-#> 121 0.665942333 1.0359773621
-#> 122 0.524818373 0.0003094690
-#> 123 1.195988781 0.0555778122
-#> 124 0.468140574 0.0912836189
-#> 125 0.448313474 1.2771303006
-#> 126 0.414959229 0.7135491729
-#> 127 0.372796904 0.0138768844
-#> 128 0.275441407 0.0858997255
-#> 129 0.836659379 0.0153752114
-#> 130 0.379513426 0.1113044416
-#> 131 0.853544550 0.0117149082
-#> 132 0.250808937 4.7418854471
-#> 133 0.924236944 0.0279103111
-#> 134 0.283081973 0.0419338551
-#> 135 0.481879173 0.3298023644
-#> 136 1.008710388 0.4587563529
-#> 137 0.541651566 2.0840803395
-#> 138 0.353732210 0.3317065721
-#> 139 0.254334345 0.0778477176
-#> 140 0.510209050 0.4775724073
-#> 141 0.801656426 0.7198098450
-#> 142 0.556701191 0.5401905310
-#> 143 0.595842510 0.0533221045
-#> 144 0.734571902 1.0940715530
-#> 145 0.733229824 1.6961670731
-#> 146 0.672008322 0.3032098599
-#> 147 0.735570728 0.4119104916
-#> 148 0.462014453 0.1776150699
-#> 149 0.420253277 1.8835323329
-#> 150 0.320179346 0.1031922926
-#> 
-#> $cos2
-#>              F1           F2
-#> 1   0.997537883 2.442069e-03
-#> 2   0.770275213 2.289389e-01
-#> 3   0.929285621 6.949892e-02
-#> 4   0.861533164 1.384668e-01
-#> 5   0.981140144 1.876324e-02
-#> 6   0.820250332 1.797497e-01
-#> 7   0.997006440 7.304536e-04
-#> 11  0.948921305 5.006041e-02
-#> 12  0.997254638 1.198698e-03
-#> 13  0.771015900 2.286355e-01
-#> 14  0.775718588 2.227084e-01
-#> 15  0.857879117 1.421129e-01
-#> 16  0.651874030 3.480990e-01
-#> 17  0.849498051 1.466163e-01
-#> 18  0.993184069 5.278443e-03
-#> 19  0.884472859 1.144510e-01
-#> 20  0.898639841 1.013588e-01
-#> 21  0.995527356 7.739112e-04
-#> 22  0.920782450 7.693067e-02
-#> 23  0.985634960 1.099383e-02
-#> 24  0.983278582 6.033923e-03
-#> 25  0.988580295 1.804280e-04
-#> 26  0.766287189 2.334871e-01
-#> 27  0.996619952 1.192913e-04
-#> 28  0.996181238 3.257461e-03
-#> 29  0.997744694 2.253183e-03
-#> 30  0.933168940 6.602192e-02
-#> 31  0.861052131 1.384664e-01
-#> 32  0.993951874 8.414246e-06
-#> 33  0.814686002 1.802995e-01
-#> 34  0.769931500 2.291324e-01
-#> 35  0.861533164 1.384668e-01
-#> 36  0.926583440 7.047060e-02
-#> 37  0.998037699 1.763122e-03
-#> 38  0.984800233 1.287005e-02
-#> 39  0.771150422 2.265235e-01
-#> 40  0.997960094 1.694966e-03
-#> 41  0.992507874 4.161436e-03
-#> 42  0.146925900 8.413062e-01
-#> 43  0.929285621 6.949892e-02
-#> 44  0.946393484 3.039071e-02
-#> 45  0.848161656 1.509286e-01
-#> 46  0.765582021 2.281188e-01
-#> 47  0.906464208 9.084652e-02
-#> 48  0.931348538 6.843763e-02
-#> 49  0.948921305 5.006041e-02
-#> 50  0.976803096 2.313478e-02
-#> 51  0.277995466 6.082479e-01
-#> 52  0.311683132 6.830184e-01
-#> 53  0.664146963 2.635440e-01
-#> 54  0.249361414 7.479428e-01
-#> 55  0.878241702 1.198537e-01
-#> 56  0.637260992 2.996949e-01
-#> 57  0.210729871 7.863598e-01
-#> 58  0.027308118 9.694709e-01
-#> 59  0.758623302 8.355378e-02
-#> 60  0.387926000 5.709851e-01
-#> 61  0.086194377 9.132535e-01
-#> 62  0.926162213 2.261503e-02
-#> 63  0.128022840 8.642691e-01
-#> 64  0.898327863 2.723157e-02
-#> 65  0.130964651 6.612032e-01
-#> 66  0.593595505 3.673229e-01
-#> 67  0.958380776 4.024891e-02
-#> 68  0.090772461 8.087892e-01
-#> 69  0.420435646 5.779399e-01
-#> 70  0.133260226 8.629393e-01
-#> 71  0.504882110 4.839482e-01
-#> 72  0.406578554 5.915782e-01
-#> 73  0.645293645 3.478754e-01
-#> 74  0.519247169 2.737241e-01
-#> 75  0.734870489 2.095489e-01
-#> 76  0.958138539 1.461335e-02
-#> 77  0.812191218 1.264981e-01
-#> 78  0.912896321 8.514938e-02
-#> 79  0.978657862 2.119510e-02
-#> 80  0.016044824 9.836341e-01
-#> 81  0.122144323 8.775790e-01
-#> 82  0.070309187 9.272035e-01
-#> 83  0.194938448 8.048312e-01
-#> 84  0.891022209 9.624269e-02
-#> 85  0.958380776 4.024891e-02
-#> 86  0.059437245 9.401643e-01
-#> 87  0.672034771 2.953945e-01
-#> 88  0.330736771 6.674844e-01
-#> 89  0.946744678 2.357189e-02
-#> 90  0.277285564 7.201808e-01
-#> 91  0.342463747 6.225436e-01
-#> 92  0.891508689 2.394109e-02
-#> 93  0.221487022 7.770072e-01
-#> 94  0.039508517 9.572545e-01
-#> 95  0.426831711 5.705601e-01
-#> 96  0.490691231 6.496627e-02
-#> 97  0.698527791 2.762532e-01
-#> 98  0.734870489 2.095489e-01
-#> 99  0.009680752 9.445952e-01
-#> 100 0.467996371 5.314018e-01
-#> 101 0.576108690 4.111629e-01
-#> 102 0.961696898 2.861893e-02
-#> 103 0.877177165 1.221776e-01
-#> 104 0.958249977 2.284791e-02
-#> 105 0.870879776 1.263950e-01
-#> 106 0.851672810 1.206619e-01
-#> 107 0.657810722 3.183482e-01
-#> 108 0.886186912 3.351128e-02
-#> 109 0.885499558 1.014339e-01
-#> 110 0.321916434 6.735496e-01
-#> 111 0.577480507 4.061726e-01
-#> 112 0.978244776 2.023845e-02
-#> 113 0.873487112 1.201395e-01
-#> 114 0.848034409 1.236129e-01
-#> 115 0.885718143 1.085828e-02
-#> 116 0.607788840 3.468240e-01
-#> 117 0.884632536 9.989009e-02
-#> 118 0.191705611 7.884282e-01
-#> 119 0.992440547 2.385649e-06
-#> 120 0.508966080 4.875811e-01
-#> 121 0.651305390 3.369285e-01
-#> 122 0.949464886 1.861772e-04
-#> 123 0.939398567 1.451656e-02
-#> 124 0.929464957 6.026831e-02
-#> 125 0.513528277 4.864713e-01
-#> 126 0.594651369 3.400324e-01
-#> 127 0.968111697 1.198353e-02
-#> 128 0.898455967 9.317487e-02
-#> 129 0.989867285 6.049073e-03
-#> 130 0.787377903 7.679059e-02
-#> 131 0.967682818 4.416571e-03
-#> 132 0.132869218 8.353566e-01
-#> 133 0.977445867 9.815525e-03
-#> 134 0.899008289 4.428491e-02
-#> 135 0.716813201 1.631402e-01
-#> 136 0.867820065 1.312456e-01
-#> 137 0.428750425 5.485781e-01
-#> 138 0.748409494 2.333771e-01
-#> 139 0.890507966 9.063963e-02
-#> 140 0.754859896 2.349616e-01
-#> 141 0.744129523 2.221864e-01
-#> 142 0.695525700 2.244282e-01
-#> 143 0.961696898 2.861893e-02
-#> 144 0.666268263 3.299894e-01
-#> 145 0.547542725 4.211977e-01
-#> 146 0.810397292 1.215923e-01
-#> 147 0.830568366 1.546654e-01
-#> 148 0.874671814 1.118173e-01
-#> 149 0.391519529 5.835188e-01
-#> 150 0.903130625 9.679300e-02
-#> 8   0.997960094 1.694966e-03
-#> 9   0.666045138 3.327885e-01
-#> 10  0.856123843 1.417503e-01
-#> 
-#> $masses
-#>           1           2           3           4           5           6 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>           7          14          15          16          17          18 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          19          20          21          22          23          24 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          25          26          27          28          29          30 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          31          32          33          34          35          36 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          37          38          39          40          41          42 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          43          44          45          46          47          48 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          49          50          51          52          53          54 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          55          56          57          58          59          60 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          61          62          63          64          65          66 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          67          68          69          70          71          72 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          73          74          75          76          77          78 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          79          80          81          82          83          84 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          85          86          87          88          89          90 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          91          92          93          94          95          96 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>          97          98          99         100         101         102 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>         103         104         105         106         107         108 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>         109         110         111         112         113         114 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>         115         116         117         118         119         120 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>         121         122         123         124         125         126 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>         127         128         129         130         131         132 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>         133         134         135         136         137         138 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>         139         140         141         142         143         144 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>         145         146         147         148         149         150 
-#> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 
-#>           8           9          10 
-#> 0.006802721 0.006802721 0.006802721 
-#> 
-#> $supplement
-#>   [1] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#>  [13] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#>  [25] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#>  [37] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#>  [49] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#>  [61] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#>  [73] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#>  [85] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#>  [97] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#> [109] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#> [121] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#> [133] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE
-#> [145] FALSE FALSE FALSE  TRUE  TRUE  TRUE
-#> 
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/summary.html b/dimensio/dev/reference/summary.html deleted file mode 100644 index 389d18250..000000000 --- a/dimensio/dev/reference/summary.html +++ /dev/null @@ -1,178 +0,0 @@ - -Object Summaries — summary • dimensio - Skip to contents - - -
-
-
- -
-

Provides a summary of the results of a multivariate data analysis.

-
- -
-

Usage

-
# S4 method for CA
-summary(object, margin = 1, active = TRUE, sup = TRUE, rank = 3)
-
-# S4 method for PCA
-summary(object, margin = 1, active = TRUE, sup = TRUE, rank = 3)
-
- -
-

Arguments

-
object
-

A CA, MCA or PCA object.

- - -
margin
-

A length-one numeric vector giving the subscript which the -data will be summarized: 1 indicates individuals/rows (the default), 2 -indicates variables/columns.

- - -
active
-

A logical scalar: should the active observations be -summarized?

- - -
sup
-

A logical scalar: should the supplementary observations be -summarized?

- - -
rank
-

An integer value specifying the maximal number of components -to be kept in the results.

- -
-
-

See also

-

Other summary: -tidy()

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Data from Lebart et al. 2006, p. 170-172
-data("colours")
-
-## Compute correspondence analysis
-X <- ca(colours)
-
-## Rows summary
-summary(X, margin = 1)
-#> --- Correspondence Analysis (CA) ------------------------------------------------
-#> 
-#> Eigenvalues:
-#>    eigenvalues variance cumulative
-#> F1       0.209   89.373     89.373
-#> F2       0.022    9.515     98.888
-#> F3       0.003    1.112    100.000
-#> 
-#> Active rows:
-#>          inertia CA1_coord CA1_contrib CA1_cos2 CA2_coord CA2_contrib CA2_cos2
-#> marron    93.086    -0.492      43.116    0.967    -0.088      13.042    0.031
-#> noisette  13.089    -0.213       3.401    0.542     0.167      19.804    0.336
-#> vert      16.085     0.162       1.355    0.176     0.339      55.910    0.773
-#> bleu     111.337     0.547      52.128    0.977    -0.083      11.244    0.022
-#>          CA3_coord CA3_contrib CA3_cos2
-#> marron       0.022       6.680    0.002
-#> noisette    -0.101      61.086    0.121
-#> vert         0.088      31.925    0.052
-#> bleu        -0.005       0.310    0.000
-
-## Columns summary
-summary(X, margin = 2)
-#> --- Correspondence Analysis (CA) ------------------------------------------------
-#> 
-#> Eigenvalues:
-#>    eigenvalues variance cumulative
-#> F1       0.209   89.373     89.373
-#> F2       0.022    9.515     98.888
-#> F3       0.003    1.112    100.000
-#> 
-#> Active columns:
-#>         inertia CA1_coord CA1_contrib CA1_cos2 CA2_coord CA2_contrib CA2_cos2
-#> brun     55.425    -0.505      22.246    0.838    -0.215      37.877    0.152
-#> chatain  12.284    -0.148       5.086    0.864     0.033       2.319    0.042
-#> roux     15.095    -0.130       0.964    0.133     0.320      55.131    0.812
-#> blond   150.793     0.835      71.704    0.993    -0.070       4.673    0.007
-#>         CA3_coord CA3_contrib CA3_cos2
-#> brun        0.056      21.633    0.010
-#> chatain    -0.049      44.284    0.094
-#> roux        0.083      31.913    0.055
-#> blond       0.016       2.171    0.000
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/tidy.html b/dimensio/dev/reference/tidy.html deleted file mode 100644 index f0fd8240a..000000000 --- a/dimensio/dev/reference/tidy.html +++ /dev/null @@ -1,249 +0,0 @@ - -Tidy Coordinates — tidy • dimensio - Skip to contents - - -
-
-
- -
-

Tidy Coordinates

-
- -
-

Usage

-
tidy(x, ...)
-
-augment(x, ...)
-
-# S4 method for MultivariateAnalysis
-augment(x, ..., margin = 1, axes = c(1, 2), principal = TRUE)
-
-# S4 method for MultivariateAnalysis
-tidy(x, ..., margin = 1, principal = TRUE)
-
- -
-

Arguments

-
x
-

A CA, MCA or PCA object.

- - -
...
-

Currently not used.

- - -
margin
-

A length-one numeric vector giving the subscript -which the data will be returned: 1 indicates individuals/rows (the -default), 2 indicates variables/columns.

- - -
axes
-

A length-two numeric vector giving the dimensions -to be for which to compute results.

- - -
principal
-

A logical scalar: should principal coordinates be -returned? If FALSE, standard coordinates are returned.

- -
-
-

Value

- - -

tidy() returns a long data.frame with the following columns:

label
-

Row/column names of the original data.

- -
component
-

Component.

- -
supplementary
-

Whether an observation is active or -supplementary.

- -
coordinate
-

Coordinates.

- -
contribution
-

Contributions to the definition of the components.

- -
cos2
-

\(cos^2\).

- - -

augment() returns a wide data.frame of the row/column coordinates -along axes and the following columns:

label
-

Row/column names of the original data.

- -
supplementary
-

Whether an observation is active or -supplementary.

- -
mass
-

Weight/mass of each observation.

- -
sum
-

Sum of squared coordinates along axes.

- -
contribution
-

Joint contributions to the definition of axes.

- -
cos2
-

Joint \(cos^2\) along axes.

- - -
-
-

See also

-

Other summary: -summary()

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE, sup_row = 5:10)
-#> 1 qualitative variable was removed: Species.
-
-## Get row principal coordinates
-head(get_coordinates(X, margin = 1, principal = TRUE))
-#>           F1         F2          F3  .sup
-#> 1  -2.385846  0.5084067 -0.12383101 FALSE
-#> 2  -2.215654 -0.6515155 -0.23313750 FALSE
-#> 3  -2.496566 -0.3169280  0.04974232 FALSE
-#> 4  -2.433607 -0.5744432  0.09690301 FALSE
-#> 11 -2.279483  1.0742447 -0.26629760 FALSE
-#> 12 -2.450871  0.1591839  0.09988982 FALSE
-
-## Get row standard coordinates
-head(get_coordinates(X, margin = 1, principal = FALSE))
-#>           F1         F2         F3  .sup
-#> 1  -1.403075  0.5268995 -0.3142569 FALSE
-#> 2  -1.302987 -0.6752138 -0.5916536 FALSE
-#> 3  -1.468187 -0.3284560  0.1262355 FALSE
-#> 4  -1.431162 -0.5953380  0.2459193 FALSE
-#> 11 -1.340525  1.1133193 -0.6758069 FALSE
-#> 12 -1.441315  0.1649741  0.2534992 FALSE
-
-## Tidy principal coordinates
-head(tidy(X, margin = 1))
-#>   label component supplementary coordinate contribution        cos2
-#> 1     1        F1         FALSE -2.3858463   1.36709655 0.954033073
-#> 2     1        F2         FALSE  0.5084067   0.19279380 0.043321256
-#> 3     1        F3         FALSE -0.1238310   0.06858151 0.002570025
-#> 4    10        F1          TRUE -2.3173283           NA 0.953213276
-#> 5    10        F2          TRUE -0.4448514           NA 0.035127301
-#> 6    10        F3          TRUE -0.2525218           NA 0.011319124
-head(tidy(X, margin = 2))
-#>          label component supplementary coordinate contribution         cos2
-#> 1 Petal.Length        F1         FALSE 0.99121597  33.97921607 0.9825091061
-#> 2 Petal.Length        F2         FALSE 0.01655680   0.02944324 0.0002741275
-#> 3 Petal.Length        F3         FALSE 0.05477927   1.93260521 0.0030007681
-#> 4  Petal.Width        F1         FALSE 0.96350955  32.10619376 0.9283506618
-#> 5  Petal.Width        F2         FALSE 0.05756108   0.35586957 0.0033132775
-#> 6  Petal.Width        F3         FALSE 0.24948796  40.08758618 0.0622442430
-
-head(augment(X, margin = 1, axes = c(1, 2)))
-#>          F1         F2 label supplementary        mass      sum contribution
-#> 1 -2.385846  0.5084067     1         FALSE 0.006944444 5.950740     4.132458
-#> 2 -2.215654 -0.6515155     2         FALSE 0.006944444 5.333593     3.703884
-#> 3 -2.496566 -0.3169280     3         FALSE 0.006944444 6.333284     4.398114
-#> 4 -2.433607 -0.5744432     4         FALSE 0.006944444 6.252426     4.341962
-#> 5 -2.279483  1.0742447    11         FALSE 0.006944444 6.350046     4.409754
-#> 6 -2.450871  0.1591839    12         FALSE 0.006944444 6.032107     4.188963
-#>        cos2
-#> 1 0.9973543
-#> 2 0.9880287
-#> 3 0.9995093
-#> 4 0.9977072
-#> 5 0.9889258
-#> 6 0.9951651
-head(augment(X, margin = 2, axes = c(1, 2)))
-#>           F1         F2        label supplementary mass       sum contribution
-#> 1  0.8875399 0.36087785 Sepal.Length         FALSE    1 0.9179599     91.79599
-#> 2 -0.4392190 0.89286998  Sepal.Width         FALSE    1 0.9901302     99.01302
-#> 3  0.9912160 0.01655680 Petal.Length         FALSE    1 0.9827832     98.27832
-#> 4  0.9635096 0.05756108  Petal.Width         FALSE    1 0.9316639     93.16639
-#>        cos2
-#> 1 0.9179599
-#> 2 0.9901302
-#> 3 0.9827832
-#> 4 0.9316639
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/viz_contributions-1.png b/dimensio/dev/reference/viz_contributions-1.png deleted file mode 100644 index 9911ff466..000000000 Binary files a/dimensio/dev/reference/viz_contributions-1.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_contributions-2.png b/dimensio/dev/reference/viz_contributions-2.png deleted file mode 100644 index 81ca78457..000000000 Binary files a/dimensio/dev/reference/viz_contributions-2.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_contributions.html b/dimensio/dev/reference/viz_contributions.html deleted file mode 100644 index 5a4296540..000000000 --- a/dimensio/dev/reference/viz_contributions.html +++ /dev/null @@ -1,220 +0,0 @@ - -Visualize Contributions and cos2 — viz_contributions • dimensio - Skip to contents - - -
-
-
- -
-

Plots contributions histogram and \(cos^2\) scatterplot.

-
- -
-

Usage

-
viz_contributions(x, ...)
-
-viz_cos2(x, ...)
-
-# S4 method for MultivariateAnalysis
-viz_contributions(
-  x,
-  ...,
-  margin = 2,
-  axes = 1,
-  sort = TRUE,
-  decreasing = TRUE,
-  limit = 10,
-  horiz = FALSE,
-  col = "grey90",
-  border = "grey10"
-)
-
-# S4 method for MultivariateAnalysis
-viz_cos2(
-  x,
-  ...,
-  margin = 2,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  sort = TRUE,
-  decreasing = TRUE,
-  limit = 10,
-  horiz = FALSE,
-  col = "grey90",
-  border = "grey10"
-)
-
- -
-

Arguments

-
x
-

A CA, MCA or PCA object.

- - -
...
-

Extra parameters to be passed to graphics::barplot().

- - -
margin
-

A length-one numeric vector giving the subscript which the -data will be returned: 1 indicates individuals/rows (the default), 2 -indicates variables/columns.

- - -
axes
-

A numeric vector giving the dimensions to be plotted.

- - -
sort
-

A logical scalar: should the data be sorted?

- - -
decreasing
-

A logical scalar: should the sort order be decreasing? -Only used if sort is TRUE.

- - -
limit
-

An integer specifying the number of top elements to be -displayed.

- - -
horiz
-

A logical scalar: should the bars be drawn horizontally -with the first at the bottom?

- - -
col, border
-

A character string specifying the bars infilling and -border colors.

- - -
active
-

A logical scalar: should the active observations be -plotted?

- - -
sup
-

A logical scalar: should the supplementary observations be -plotted?

- -
-
-

Value

- - -

viz_contributions() and viz_cos2() are called for their side-effects: -they result in a graphic being displayed. Invisibly return x.

-
-
-

See also

-

Other plot methods: -biplot(), -screeplot(), -viz_individuals(), -viz_variables(), -viz_wrap, -wrap

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE)
-#> 1 qualitative variable was removed: Species.
-
-## Get row contributions
-head(get_contributions(X, margin = 1))
-#>          F1         F2          F3
-#> 1 1.1715796 0.16806554 0.074085470
-#> 2 0.9891845 0.33146674 0.250034006
-#> 3 1.2768164 0.08526419 0.008875320
-#> 4 1.2077372 0.26029781 0.037858004
-#> 5 1.3046313 0.30516562 0.001125175
-#> 6 0.9841236 1.61748779 0.003303827
-
-## Plot contributions
-viz_contributions(X)
-
-
-## Plot cos2
-viz_cos2(X)
-
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/viz_individuals-1.png b/dimensio/dev/reference/viz_individuals-1.png deleted file mode 100644 index db18278cd..000000000 Binary files a/dimensio/dev/reference/viz_individuals-1.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_individuals-2.png b/dimensio/dev/reference/viz_individuals-2.png deleted file mode 100644 index 5da13a9d4..000000000 Binary files a/dimensio/dev/reference/viz_individuals-2.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_individuals-3.png b/dimensio/dev/reference/viz_individuals-3.png deleted file mode 100644 index 1e7114522..000000000 Binary files a/dimensio/dev/reference/viz_individuals-3.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_individuals-4.png b/dimensio/dev/reference/viz_individuals-4.png deleted file mode 100644 index c40e5894b..000000000 Binary files a/dimensio/dev/reference/viz_individuals-4.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_individuals-5.png b/dimensio/dev/reference/viz_individuals-5.png deleted file mode 100644 index 867f96026..000000000 Binary files a/dimensio/dev/reference/viz_individuals-5.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_individuals-6.png b/dimensio/dev/reference/viz_individuals-6.png deleted file mode 100644 index 5e06431c6..000000000 Binary files a/dimensio/dev/reference/viz_individuals-6.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_individuals-7.png b/dimensio/dev/reference/viz_individuals-7.png deleted file mode 100644 index 931ab2d78..000000000 Binary files a/dimensio/dev/reference/viz_individuals-7.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_individuals-8.png b/dimensio/dev/reference/viz_individuals-8.png deleted file mode 100644 index 87cb88ec0..000000000 Binary files a/dimensio/dev/reference/viz_individuals-8.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_individuals-9.png b/dimensio/dev/reference/viz_individuals-9.png deleted file mode 100644 index 30c76a07c..000000000 Binary files a/dimensio/dev/reference/viz_individuals-9.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_individuals.html b/dimensio/dev/reference/viz_individuals.html deleted file mode 100644 index 4edbc4ace..000000000 --- a/dimensio/dev/reference/viz_individuals.html +++ /dev/null @@ -1,297 +0,0 @@ - -Visualize Individuals Factor Map — viz_individuals • dimensio - Skip to contents - - -
-
-
- -
-

Plots row/individual principal coordinates.

-
- -
-

Usage

-
viz_individuals(x, ...)
-
-viz_rows(x, ...)
-
-# S4 method for MultivariateAnalysis
-viz_rows(
-  x,
-  ...,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  labels = FALSE,
-  highlight = NULL,
-  xlim = NULL,
-  ylim = NULL,
-  main = NULL,
-  sub = NULL,
-  panel.first = NULL,
-  panel.last = NULL,
-  legend = list(x = "topleft")
-)
-
-# S4 method for BootstrapCA
-viz_rows(x, ..., axes = c(1, 2))
-
-# S4 method for PCA
-viz_individuals(
-  x,
-  ...,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  labels = FALSE,
-  highlight = NULL,
-  xlim = NULL,
-  ylim = NULL,
-  main = NULL,
-  sub = NULL,
-  panel.first = NULL,
-  panel.last = NULL,
-  legend = list(x = "topleft")
-)
-
- -
-

Arguments

-
x
-

A CA, MCA or PCA object.

- - -
...
-

Further graphical parameters (see details).

- - -
axes
-

A length-two numeric vector giving the dimensions to be -plotted.

- - -
active
-

A logical scalar: should the active observations be -plotted?

- - -
sup
-

A logical scalar: should the supplementary observations be -plotted?

- - -
labels
-

A logical scalar: should labels be drawn?

- - -
highlight
-

A vector specifying the information to be highlighted. -If NULL (the default), no highlighting is applied. If a single character -string is passed, it must be one of "observation", "mass", "sum", -"contribution" or "cos2" (see augment()). Any unambiguous substring -can be given.

- - -
xlim
-

A length-two numeric vector giving the x limits of the plot. -The default value, NULL, indicates that the range of the -finite values to be plotted should be used.

- - -
ylim
-

A length-two numeric vector giving the y limits of the plot. -The default value, NULL, indicates that the range of the -finite values to be plotted should be used.

- - -
main
-

A character string giving a main title for the plot.

- - -
sub
-

A character string giving a subtitle for the plot.

- - -
panel.first
-

An expression to be evaluated after the plot axes are -set up but before any plotting takes place. This can be useful for drawing -background grids.

- - -
panel.last
-

An expression to be evaluated after plotting has taken -place but before the axes, title and box are added.

- - -
legend
-

A list of additional arguments to be passed to -graphics::legend(); names of the list are used as argument names. -If NULL, no legend is displayed.

- -
-
-

Value

- - -

viz_*() is called for its side-effects: it results in a graphic -being displayed. Invisibly returns x.

-
-
-

Details

-

Commonly used graphical parameters are:

pch
-

A vector of plotting characters or symbols. This can either be -a single character or an integer code for one of a set of -graphics symbols.

- -
cex
-

A numerical vector giving the amount by which plotting -characters and symbols should be scaled relative to the -default.

- -
col
-

The colors for lines and points. Multiple colors can be -specified so that each point can be given its own color.

- -
bg
-

The background color for the open plot symbols given by -pch = 21:25.

- - -
-
-

Note

-

Be careful: graphical parameters are silently recycled.

-
-
-

See also

-

Other plot methods: -biplot(), -screeplot(), -viz_contributions(), -viz_variables(), -viz_wrap, -wrap

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE)
-#> 1 qualitative variable was removed: Species.
-
-## Plot individuals
-viz_individuals(X, panel.last = graphics::grid())
-
-
-## Plot variables
-viz_variables(X, panel.last = graphics::grid())
-
-
-## Graphical parameters
-## Continuous values
-viz_individuals(X, highlight = iris$Petal.Length, pch = 16)
-
-viz_individuals(X, highlight = iris$Petal.Length, pch = 16,
-                col = grDevices::hcl.colors(12, "RdPu"))
-
-viz_individuals(X, highlight = iris$Petal.Length, pch = 16,
-                col = grDevices::hcl.colors(12, "RdPu"),
-                cex = c(1, 2))
-
-
-viz_variables(X, highlight = "contribution",
-              col = grDevices::hcl.colors(12, "BluGrn", rev = TRUE),
-              lwd = c(1, 5))
-
-
-## Discrete values
-viz_individuals(X, highlight = iris$Species, pch = 21:23)
-
-viz_individuals(X, highlight = iris$Species, pch = 21:23,
-                bg = c("#004488", "#DDAA33", "#BB5566"),
-                col = "black")
-
-
-viz_variables(X, highlight = c("Petal", "Petal", "Sepal", "Sepal"),
-              col = c("#EE7733", "#0077BB"),
-              lty = c(1, 3))
-
-
-
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/viz_variables-1.png b/dimensio/dev/reference/viz_variables-1.png deleted file mode 100644 index db18278cd..000000000 Binary files a/dimensio/dev/reference/viz_variables-1.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_variables-2.png b/dimensio/dev/reference/viz_variables-2.png deleted file mode 100644 index 232d92b7d..000000000 Binary files a/dimensio/dev/reference/viz_variables-2.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_variables-3.png b/dimensio/dev/reference/viz_variables-3.png deleted file mode 100644 index 1e7114522..000000000 Binary files a/dimensio/dev/reference/viz_variables-3.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_variables-4.png b/dimensio/dev/reference/viz_variables-4.png deleted file mode 100644 index c40e5894b..000000000 Binary files a/dimensio/dev/reference/viz_variables-4.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_variables-5.png b/dimensio/dev/reference/viz_variables-5.png deleted file mode 100644 index 867f96026..000000000 Binary files a/dimensio/dev/reference/viz_variables-5.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_variables-6.png b/dimensio/dev/reference/viz_variables-6.png deleted file mode 100644 index 5e06431c6..000000000 Binary files a/dimensio/dev/reference/viz_variables-6.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_variables-7.png b/dimensio/dev/reference/viz_variables-7.png deleted file mode 100644 index 931ab2d78..000000000 Binary files a/dimensio/dev/reference/viz_variables-7.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_variables-8.png b/dimensio/dev/reference/viz_variables-8.png deleted file mode 100644 index 87cb88ec0..000000000 Binary files a/dimensio/dev/reference/viz_variables-8.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_variables-9.png b/dimensio/dev/reference/viz_variables-9.png deleted file mode 100644 index 30c76a07c..000000000 Binary files a/dimensio/dev/reference/viz_variables-9.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_variables.html b/dimensio/dev/reference/viz_variables.html deleted file mode 100644 index 909edd7f7..000000000 --- a/dimensio/dev/reference/viz_variables.html +++ /dev/null @@ -1,324 +0,0 @@ - -Visualize Variables Factor Map — viz_variables • dimensio - Skip to contents - - -
-
-
- -
-

Plots column/variable principal coordinates.

-
- -
-

Usage

-
viz_variables(x, ...)
-
-viz_columns(x, ...)
-
-# S4 method for MultivariateAnalysis
-viz_columns(
-  x,
-  ...,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  labels = FALSE,
-  highlight = NULL,
-  xlim = NULL,
-  ylim = NULL,
-  main = NULL,
-  sub = NULL,
-  panel.first = NULL,
-  panel.last = NULL,
-  legend = list(x = "topleft")
-)
-
-# S4 method for BootstrapCA
-viz_columns(x, ..., axes = c(1, 2))
-
-# S4 method for PCA
-viz_variables(
-  x,
-  ...,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  labels = TRUE,
-  highlight = NULL,
-  xlim = NULL,
-  ylim = NULL,
-  main = NULL,
-  sub = NULL,
-  panel.first = NULL,
-  panel.last = NULL,
-  legend = list(x = "topleft")
-)
-
-# S4 method for CA
-viz_variables(
-  x,
-  ...,
-  axes = c(1, 2),
-  active = TRUE,
-  sup = TRUE,
-  labels = FALSE,
-  highlight = NULL,
-  xlim = NULL,
-  ylim = NULL,
-  main = NULL,
-  sub = NULL,
-  panel.first = NULL,
-  panel.last = NULL,
-  legend = list(x = "topleft")
-)
-
-# S4 method for BootstrapPCA
-viz_variables(x, ..., axes = c(1, 2))
-
- -
-

Arguments

-
x
-

A CA, MCA or PCA object.

- - -
...
-

Further graphical parameters (see details).

- - -
axes
-

A length-two numeric vector giving the dimensions to be -plotted.

- - -
active
-

A logical scalar: should the active observations be -plotted?

- - -
sup
-

A logical scalar: should the supplementary observations be -plotted?

- - -
labels
-

A logical scalar: should labels be drawn?

- - -
highlight
-

A vector specifying the information to be highlighted. -If NULL (the default), no highlighting is applied. If a single character -string is passed, it must be one of "observation", "mass", "sum", -"contribution" or "cos2" (see augment()). Any unambiguous substring -can be given.

- - -
xlim
-

A length-two numeric vector giving the x limits of the plot. -The default value, NULL, indicates that the range of the -finite values to be plotted should be used.

- - -
ylim
-

A length-two numeric vector giving the y limits of the plot. -The default value, NULL, indicates that the range of the -finite values to be plotted should be used.

- - -
main
-

A character string giving a main title for the plot.

- - -
sub
-

A character string giving a subtitle for the plot.

- - -
panel.first
-

An expression to be evaluated after the plot axes are -set up but before any plotting takes place. This can be useful for drawing -background grids.

- - -
panel.last
-

An expression to be evaluated after plotting has taken -place but before the axes, title and box are added.

- - -
legend
-

A list of additional arguments to be passed to -graphics::legend(); names of the list are used as argument names. -If NULL, no legend is displayed.

- -
-
-

Value

- - -

viz_*() is called for its side-effects: it results in a graphic -being displayed. Invisibly returns x.

-
-
-

Details

-

Commonly used graphical parameters are:

pch
-

A vector of plotting characters or symbols. This can either be -a single character or an integer code for one of a set of -graphics symbols.

- -
cex
-

A numerical vector giving the amount by which plotting -characters and symbols should be scaled relative to the -default.

- -
lty
-

A vector of line types.

- -
lwd
-

A vector of line widths.

- -
col
-

The colors for lines and points. Multiple colors can be -specified so that each point can be given its own color.

- -
bg
-

The background color for the open plot symbols given by -pch = 21:25.

- - -
-
-

Note

-

Be careful: graphical parameters are silently recycled.

-
-
-

See also

-

Other plot methods: -biplot(), -screeplot(), -viz_contributions(), -viz_individuals(), -viz_wrap, -wrap

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE)
-#> 1 qualitative variable was removed: Species.
-
-## Plot individuals
-viz_individuals(X, panel.last = graphics::grid())
-
-
-## Plot variables
-viz_variables(X, panel.last = graphics::grid())
-
-
-## Graphical parameters
-## Continuous values
-viz_individuals(X, highlight = iris$Petal.Length, pch = 16)
-
-viz_individuals(X, highlight = iris$Petal.Length, pch = 16,
-                col = grDevices::hcl.colors(12, "RdPu"))
-
-viz_individuals(X, highlight = iris$Petal.Length, pch = 16,
-                col = grDevices::hcl.colors(12, "RdPu"),
-                cex = c(1, 2))
-
-
-viz_variables(X, highlight = "contribution",
-              col = grDevices::hcl.colors(12, "BluGrn", rev = TRUE),
-              lwd = c(1, 5))
-
-
-## Discrete values
-viz_individuals(X, highlight = iris$Species, pch = 21:23)
-
-viz_individuals(X, highlight = iris$Species, pch = 21:23,
-                bg = c("#004488", "#DDAA33", "#BB5566"),
-                col = "black")
-
-
-viz_variables(X, highlight = c("Petal", "Petal", "Sepal", "Sepal"),
-              col = c("#EE7733", "#0077BB"),
-              lty = c(1, 3))
-
-
-
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/viz_wrap-1.png b/dimensio/dev/reference/viz_wrap-1.png deleted file mode 100644 index 1635f5dbf..000000000 Binary files a/dimensio/dev/reference/viz_wrap-1.png and /dev/null differ diff --git a/dimensio/dev/reference/viz_wrap.html b/dimensio/dev/reference/viz_wrap.html deleted file mode 100644 index c59c57b51..000000000 --- a/dimensio/dev/reference/viz_wrap.html +++ /dev/null @@ -1,185 +0,0 @@ - -Plot Envelopes — viz_wrap • dimensio - Skip to contents - - -
-
-
- -
-

Plot Envelopes

-
- -
-

Usage

-
viz_hull(x, ...)
-
-viz_confidence(x, ...)
-
-viz_tolerance(x, ...)
-
-# S4 method for MultivariateAnalysis
-viz_tolerance(x, ..., margin = 1, axes = c(1, 2), group = NULL, level = 0.95)
-
-# S4 method for BootstrapCA
-viz_tolerance(x, ..., margin = 1, axes = c(1, 2), level = 0.95)
-
-# S4 method for MultivariateAnalysis
-viz_confidence(x, ..., margin = 1, axes = c(1, 2), group = NULL, level = 0.95)
-
-# S4 method for BootstrapCA
-viz_confidence(x, ..., margin = 1, axes = c(1, 2), level = 0.95)
-
-# S4 method for MultivariateAnalysis
-viz_hull(x, ..., margin = 1, axes = c(1, 2), group = NULL)
-
-# S4 method for BootstrapCA
-viz_hull(x, ..., margin = 1, axes = c(1, 2))
-
- -
-

Arguments

-
x
-

An object from which to wrap observations (a CA, -MCA or PCA object).

- - -
...
-

Further graphical parameters to be passed to -graphics::polygon().

- - -
margin
-

A length-one numeric vector giving the subscript which the -data will be returned: 1 indicates individuals/rows (the default), 2 -indicates variables/columns.

- - -
axes
-

A length-two numeric vector giving the dimensions -to be for which to compute results.

- - -
group
-

A vector specifying the group an observation belongs to.

- - -
level
-

A numeric vector specifying the confidence/tolerance level.

- -
-
-

Value

- - -

viz_*()is called for its side-effects: it results in a graphic being -displayed. Invisibly returns x.

-
-
-

See also

-

Other plot methods: -biplot(), -screeplot(), -viz_contributions(), -viz_individuals(), -viz_variables(), -wrap

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE)
-#> 1 qualitative variable was removed: Species.
-
-## Convex hull coordinates
-hulls <- wrap_hull(X, margin = 1, group = iris$Species)
-
-## Confidence ellipse coordinates
-conf <- wrap_confidence(X, margin = 1, group = iris$Species,
-                        level = c(0.68, 0.95))
-
-## Tolerance ellipse coordinates
-conf <- wrap_confidence(X, margin = 1, group = iris$Species, level = 0.95)
-
-## Plot with convex hulls
-col <- c("#004488", "#DDAA33", "#BB5566")
-viz_rows(X, highlight = iris$Species, col = col)
-viz_hull(X, group = iris$Species, border = col)
-
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/reference/wrap-1.png b/dimensio/dev/reference/wrap-1.png deleted file mode 100644 index 1635f5dbf..000000000 Binary files a/dimensio/dev/reference/wrap-1.png and /dev/null differ diff --git a/dimensio/dev/reference/wrap.html b/dimensio/dev/reference/wrap.html deleted file mode 100644 index af6fd9a0b..000000000 --- a/dimensio/dev/reference/wrap.html +++ /dev/null @@ -1,193 +0,0 @@ - -Wrap Observations — wrap • dimensio - Skip to contents - - -
-
-
- -
- -
  • wrap_hull() computes convex hull of a set of observations.

  • -
  • wrap_confidence() computes a confidence ellipse.

  • -
  • wrap_tolerance() computes a tolerance ellipse.

  • -
- -
-

Usage

-
wrap_hull(x, ...)
-
-wrap_confidence(x, ...)
-
-wrap_tolerance(x, ...)
-
-# S4 method for MultivariateAnalysis
-wrap_confidence(x, margin = 1, axes = c(1, 2), group = NULL, level = 0.95)
-
-# S4 method for MultivariateAnalysis
-wrap_tolerance(x, margin = 1, axes = c(1, 2), group = NULL, level = 0.95)
-
-# S4 method for MultivariateAnalysis
-wrap_hull(x, margin = 1, axes = c(1, 2), group = NULL)
-
- -
-

Arguments

-
x
-

An object from which to wrap observations (a CA, -MCA or PCA object).

- - -
...
-

Currently not used.

- - -
margin
-

A length-one numeric vector giving the subscript which the -data will be returned: 1 indicates individuals/rows (the default), 2 -indicates variables/columns.

- - -
axes
-

A length-two numeric vector giving the dimensions -to be for which to compute results.

- - -
group
-

A vector specifying the group an observation belongs to.

- - -
level
-

A numeric vector specifying the confidence/tolerance level.

- -
-
-

Value

- - -

wrap_*() returns a data.frame of envelope x and y coordinates.

- - -

An extra column named group is added specifying the group an observation -belongs to.

-
-
-

See also

-

Other plot methods: -biplot(), -screeplot(), -viz_contributions(), -viz_individuals(), -viz_variables(), -viz_wrap

-
-
-

Author

-

N. Frerebeau

-
- -
-

Examples

-
## Load data
-data("iris")
-
-## Compute principal components analysis
-X <- pca(iris, scale = TRUE)
-#> 1 qualitative variable was removed: Species.
-
-## Convex hull coordinates
-hulls <- wrap_hull(X, margin = 1, group = iris$Species)
-
-## Confidence ellipse coordinates
-conf <- wrap_confidence(X, margin = 1, group = iris$Species,
-                        level = c(0.68, 0.95))
-
-## Tolerance ellipse coordinates
-conf <- wrap_confidence(X, margin = 1, group = iris$Species, level = 0.95)
-
-## Plot with convex hulls
-col <- c("#004488", "#DDAA33", "#BB5566")
-viz_rows(X, highlight = iris$Species, col = col)
-viz_hull(X, group = iris$Species, border = col)
-
-
-
-
- - -
- - - -
- - - - - - - diff --git a/dimensio/dev/search.json b/dimensio/dev/search.json deleted file mode 100644 index 72a0fbd08..000000000 --- a/dimensio/dev/search.json +++ /dev/null @@ -1 +0,0 @@ -[{"path":"https://packages.tesselle.org/dimensio/dev/articles/pca.html","id":"do-pca","dir":"Articles","previous_headings":"","what":"Do PCA","title":"Principal Components Analysis","text":"","code":"## Load data data(iris) head(iris) #> Sepal.Length Sepal.Width Petal.Length Petal.Width Species #> 1 5.1 3.5 1.4 0.2 setosa #> 2 4.9 3.0 1.4 0.2 setosa #> 3 4.7 3.2 1.3 0.2 setosa #> 4 4.6 3.1 1.5 0.2 setosa #> 5 5.0 3.6 1.4 0.2 setosa #> 6 5.4 3.9 1.7 0.4 setosa ## Compute PCA ## (non numeric variables are automatically removed) X <- pca(iris, center = TRUE, scale = TRUE) #> 1 qualitative variable was removed: Species."},{"path":"https://packages.tesselle.org/dimensio/dev/articles/pca.html","id":"explore-the-results","dir":"Articles","previous_headings":"","what":"Explore the results","title":"Principal Components Analysis","text":"dimensio provides several methods extract (get_*()) results: get_data() returns original data. get_contributions() returns contributions definition principal dimensions. get_coordinates() returns principal standard coordinates. get_correlations() returns correlations variables dimensions. get_cos2() returns cos2 values (.e. quality representation points factor map). get_eigenvalues() returns eigenvalues, percentages variance cumulative percentages variance. package also allows quickly visualize (viz_*()) results: biplot() produces biplot. screeplot() produces scree plot. viz_rows()/viz_individuals() displays row/individual principal coordinates. viz_columns()/viz_variables() displays columns/variable principal coordinates. viz_contributions() displays (joint) contributions. viz_cos2() displays (joint) cos2.","code":"## Get eigenvalues get_eigenvalues(X) #> eigenvalues variance cumulative #> F1 2.9184978 73.342264 73.34226 #> F2 0.9140305 22.969715 96.31198 #> F3 0.1467569 3.688021 100.00000 ## Scree plot screeplot(X, cumulative = TRUE) ## Plot variable contributions to the definition of the first two axes viz_contributions(X, margin = 2, axes = c(1, 2))"},{"path":"https://packages.tesselle.org/dimensio/dev/articles/pca.html","id":"pca-biplot","dir":"Articles","previous_headings":"","what":"PCA biplot","title":"Principal Components Analysis","text":"biplot simultaneous representation rows columns rectangular dataset. generalization scatterplot case mutlivariate data: allows visualize much information possible single graph (greenacre2010?). dimensio allows display two types biplots: form biplot (row-metric-preserving biplot) covariance biplot (column-metric-preserving biplot). See (greenacre2010?) details biplots. form biplot favors representation individuals: distance individuals approximates Euclidean distance rows. form biplot length vector approximates quality representation variable. covariance biplot favors representation variables: length vector approximates standard deviation variable cosine angle formed two vectors approximates correlation two variables (greenacre2010?). covariance biplot distance individuals approximates Mahalanobis distance rows. Biplots drawbacks advantages: can quickly become difficult read display lot information . may preferable visualize results individuals variables separately.","code":"biplot(X, type = \"form\", label = \"variables\") biplot(X, type = \"covariance\", label = \"variables\")"},{"path":"https://packages.tesselle.org/dimensio/dev/articles/pca.html","id":"plot-pca-loadings","dir":"Articles","previous_headings":"","what":"Plot PCA loadings","title":"Principal Components Analysis","text":"viz_variables() depicts variables rays emanating origin (lengths directions important interpretation). viz_variables() allows highlight additional information varying different graphical elements (color, transparency, shape size symbols…).","code":"## Plot variables factor map viz_variables(X) ## Highlight cos2 viz_variables( x = X, highlight = \"cos2\", col = khroma::color(\"YlOrBr\")(4, range = c(0.5, 1)), legend = list(x = \"bottomleft\") )"},{"path":"https://packages.tesselle.org/dimensio/dev/articles/pca.html","id":"plot-pca-scores","dir":"Articles","previous_headings":"","what":"Plot PCA scores","title":"Principal Components Analysis","text":"viz_individuals() allows display individuals highlight additional information.","code":"## Plot individuals and color by species viz_individuals( x = X, highlight = iris$Species, col = khroma::color(\"bright\")(3), # Custom color scale pch = c(15, 16, 17), # Custom symbols legend = list(x = \"bottomright\") ) ## Add ellipses viz_individuals(x = X) viz_tolerance(x = X, group = iris$Species, level = 0.95, border = khroma::color(\"high contrast\")(3)) ## Add convex hull viz_individuals(x = X) viz_hull(x = X, group = iris$Species, level = 0.95, border = khroma::color(\"high contrast\")(3)) ## Highlight petal length viz_individuals( x = X, highlight = iris$Petal.Length, col = khroma::color(\"YlOrBr\")(12), # Custom color scale cex = c(1, 2), # Custom size scale pch = 16, legend = list(x = \"bottomleft\") ) ## Highlight contributions viz_individuals( x = X, highlight = \"contrib\", col = khroma::color(\"iridescent\")(12), # Custom color scale cex = c(1, 2), # Custom size scale pch = 16, legend = list(x = \"bottomleft\") )"},{"path":"https://packages.tesselle.org/dimensio/dev/articles/pca.html","id":"custom-plot","dir":"Articles","previous_headings":"","what":"Custom plot","title":"Principal Components Analysis","text":"need flexibility, get_*() family tidy() augment() functions allow extract results data frames thus build custom graphs base graphics ggplot2.","code":"iris_tidy <- tidy(X, margin = 2) head(iris_tidy) #> label component supplementary coordinate contribution cos2 #> 1 Petal.Length F1 FALSE 0.99155518 33.68793618 0.983181682 #> 2 Petal.Length F2 FALSE 0.02341519 0.05998389 0.000548271 #> 3 Petal.Length F3 FALSE 0.05444699 2.01999049 0.002964475 #> 4 Petal.Width F1 FALSE 0.96497896 31.90629060 0.931184395 #> 5 Petal.Width F2 FALSE 0.06399985 0.44812296 0.004095980 #> 6 Petal.Width F3 FALSE 0.24298265 40.23019050 0.059040571 iris_augment <- augment(X, margin = 1) head(iris_augment) #> F1 F2 label supplementary mass sum contribution #> 1 -2.264703 0.4800266 1 FALSE 0.006666667 5.359304 3.572870 #> 2 -2.080961 -0.6741336 2 FALSE 0.006666667 4.784855 3.189904 #> 3 -2.364229 -0.3419080 3 FALSE 0.006666667 5.706480 3.804320 #> 4 -2.299384 -0.5973945 4 FALSE 0.006666667 5.644048 3.762699 #> 5 -2.389842 0.6468354 5 FALSE 0.006666667 6.129742 4.086494 #> 6 -2.075631 1.4891775 6 FALSE 0.006666667 6.525894 4.350596 #> cos2 #> 1 0.9968578 #> 2 0.9864650 #> 3 0.9995167 #> 4 0.9977577 #> 5 0.9997491 #> 6 0.9998819 ## Custom plot with ggplot2 ggplot2::ggplot(data = iris_augment) + ggplot2::aes(x = F1, y = F2, colour = contribution) + ggplot2::geom_vline(xintercept = 0, linewidth = 0.5, linetype = \"dashed\") + ggplot2::geom_hline(yintercept = 0, linewidth = 0.5, linetype = \"dashed\") + ggplot2::geom_point() + ggplot2::coord_fixed() + # /!\\ ggplot2::theme_bw() + khroma::scale_color_iridescent()"},{"path":[]},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/index.html","id":"overview","dir":"","previous_headings":"","what":"Overview","title":"Multivariate Data Analysis","text":"Simple Principal Components Analysis (PCA; see vignette(\"pca\")) (Multiple) Correspondence Analysis (CA) based Singular Value Decomposition (SVD). package provides S4 classes methods compute, extract, summarize visualize results multivariate data analysis. also includes methods partial bootstrap validation. many good packages multivariate data analysis (FactoMineR, ade4, vegan ca, extended FactoExtra). dimensio designed simple possible, providing necessary tools explore results analysis.","code":"To cite dimensio in publications use: Frerebeau N (2023). _dimensio: Multivariate Data Analysis_. Université Bordeaux Montaigne, Pessac, France. doi:10.5281/zenodo.4478530 , R package version 0.4.1, . A BibTeX entry for LaTeX users is @Manual{, author = {Nicolas Frerebeau}, title = {{dimensio: Multivariate Data Analysis}}, year = {2023}, organization = {Université Bordeaux Montaigne}, address = {Pessac, France}, note = {R package version 0.4.1}, doi = {10.5281/zenodo.4478530}, url = {https://packages.tesselle.org/dimensio/}, } This package is a part of the tesselle project ."},{"path":"https://packages.tesselle.org/dimensio/dev/index.html","id":"installation","dir":"","previous_headings":"","what":"Installation","title":"Multivariate Data Analysis","text":"can install released version dimensio CRAN : development version GitHub :","code":"install.packages(\"dimensio\") # install.packages(\"remotes\") remotes::install_github(\"tesselle/dimensio\")"},{"path":"https://packages.tesselle.org/dimensio/dev/index.html","id":"usage","dir":"","previous_headings":"","what":"Usage","title":"Multivariate Data Analysis","text":"","code":"## Install extra packages (if needed) # install.packages(\"khroma\") ## Load packages library(dimensio)"},{"path":"https://packages.tesselle.org/dimensio/dev/index.html","id":"compute","dir":"","previous_headings":"Usage","what":"Compute","title":"Multivariate Data Analysis","text":"","code":"## Load data data(iris) ## Compute PCA ## (non numeric variables are automatically removed) X <- pca(iris, center = TRUE, scale = TRUE) #> 1 qualitative variable was removed: Species."},{"path":"https://packages.tesselle.org/dimensio/dev/index.html","id":"extract","dir":"","previous_headings":"Usage","what":"Extract","title":"Multivariate Data Analysis","text":"dimensio provides several methods extract results: get_data() returns original data. get_contributions() returns contributions definition principal dimensions. get_coordinates() returns principal standard coordinates. get_correlations() returns correlations variables dimensions. get_cos2() returns cos2 values (.e. quality representation points factor map). get_eigenvalues() returns eigenvalues, percentages variance cumulative percentages variance.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/index.html","id":"visualize","dir":"","previous_headings":"Usage","what":"Visualize","title":"Multivariate Data Analysis","text":"package allows quickly visualize results: biplot() produces biplot. screeplot() produces scree plot. viz_rows()/viz_individuals() displays row/individual principal coordinates. viz_columns()/viz_variables() displays columns/variable principal coordinates. viz_variables() depicts variables rays emanating origin (lengths directions important interpretation). viz_contributions() displays (joint) contributions. viz_cos2() displays (joint) cos2. viz_*() functions allow highlight additional information varying different graphical elements (color, transparency, shape size symbols…).","code":"## Form biplot biplot(X, type = \"form\") ## Highlight species viz_individuals( x = X, highlight = iris$Species, col = khroma::color(\"high contrast\")(3), pch = 16 ) ## Add ellipses viz_tolerance( x = X, group = iris$Species, level = 0.95, border = khroma::color(\"high contrast\")(3) ) ## Highlight petal length viz_individuals( x = X, highlight = iris$Petal.Length, col = khroma::color(\"iridescent\")(255), cex = c(1, 2), pch = 16 ) ## Plot variables factor map viz_variables(X) ## Scree plot screeplot(X, eigenvalues = FALSE, cumulative = TRUE)"},{"path":"https://packages.tesselle.org/dimensio/dev/index.html","id":"contributing","dir":"","previous_headings":"","what":"Contributing","title":"Multivariate Data Analysis","text":"Please note dimensio project released Contributor Code Conduct. contributing project, agree abide terms.","code":""},{"path":[]},{"path":[]},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/BootstrapCA-class.html","id":null,"dir":"Reference","previous_headings":"","what":"Bootstrap CA Results — BootstrapCA-class","title":"Bootstrap CA Results — BootstrapCA-class","text":"S4 class store bootstrap correspondence analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/BootstrapCA-class.html","id":"note","dir":"Reference","previous_headings":"","what":"Note","title":"Bootstrap CA Results — BootstrapCA-class","text":"class inherits CA MultivariateBootstrap.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/BootstrapCA-class.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Bootstrap CA Results — BootstrapCA-class","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/BootstrapCA-class.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Bootstrap CA Results — BootstrapCA-class","text":"","code":"## Bootstrap on CA ## Data from Lebart et al. 2006, p. 170-172 data(\"colours\") ## Compute correspondence analysis X <- ca(colours) ## Bootstrap (30 replicates) Y <- bootstrap(X, n = 30) if (FALSE) { ## Get replicated coordinates get_replications(Y, margin = 1) get_replications(Y, margin = 2) } ## Plot with ellipses viz_rows(Y) viz_tolerance(Y, margin = 1, level = c(0.68, 0.95)) viz_columns(Y) viz_tolerance(Y, margin = 2, level = c(0.68, 0.95)) ## Plot with convex hulls viz_columns(Y) viz_hull(Y, margin = 2) ## Bootstrap on PCA ## Compute principal components analysis data(\"iris\") X <- pca(iris) #> 1 qualitative variable was removed: Species. ## Bootstrap (30 replicates) Y <- bootstrap(X, n = 30) ## Plot with ellipses viz_variables(Y) viz_tolerance(Y, margin = 2, level = c(0.68, 0.95))"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/BootstrapPCA-class.html","id":null,"dir":"Reference","previous_headings":"","what":"Bootstrap PCA Results — BootstrapPCA-class","title":"Bootstrap PCA Results — BootstrapPCA-class","text":"S4 class store bootstrap principal components analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/BootstrapPCA-class.html","id":"note","dir":"Reference","previous_headings":"","what":"Note","title":"Bootstrap PCA Results — BootstrapPCA-class","text":"class inherits PCA MultivariateBootstrap.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/BootstrapPCA-class.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Bootstrap PCA Results — BootstrapPCA-class","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/BootstrapPCA-class.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Bootstrap PCA Results — BootstrapPCA-class","text":"","code":"## Bootstrap on CA ## Data from Lebart et al. 2006, p. 170-172 data(\"colours\") ## Compute correspondence analysis X <- ca(colours) ## Bootstrap (30 replicates) Y <- bootstrap(X, n = 30) if (FALSE) { ## Get replicated coordinates get_replications(Y, margin = 1) get_replications(Y, margin = 2) } ## Plot with ellipses viz_rows(Y) viz_tolerance(Y, margin = 1, level = c(0.68, 0.95)) viz_columns(Y) viz_tolerance(Y, margin = 2, level = c(0.68, 0.95)) ## Plot with convex hulls viz_columns(Y) viz_hull(Y, margin = 2) ## Bootstrap on PCA ## Compute principal components analysis data(\"iris\") X <- pca(iris) #> 1 qualitative variable was removed: Species. ## Bootstrap (30 replicates) Y <- bootstrap(X, n = 30) ## Plot with ellipses viz_variables(Y) viz_tolerance(Y, margin = 2, level = c(0.68, 0.95))"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/CA-class.html","id":null,"dir":"Reference","previous_headings":"","what":"CA Results — CA-class","title":"CA Results — CA-class","text":"S4 class store results simple correspondence analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/CA-class.html","id":"note","dir":"Reference","previous_headings":"","what":"Note","title":"CA Results — CA-class","text":"class inherits MultivariateAnalysis.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/CA-class.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"CA Results — CA-class","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/CA-class.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"CA Results — CA-class","text":"","code":"## Data from Lebart et al. 2006, p. 170-172 data(\"colours\") ## The chi square of independence between the two variables stats::chisq.test(colours) #> #> \tPearson's Chi-squared test #> #> data: colours #> X-squared = 138.29, df = 9, p-value < 2.2e-16 #> ## Compute correspondence analysis X <- ca(colours) ## Plot rows viz_rows(X, labels = TRUE) ## Plot columns viz_columns(X, labels = TRUE) ## Get row coordinates head(get_coordinates(X, margin = 1)) #> F1 F2 F3 .sup #> marron -0.4921577 -0.08832151 0.021611305 FALSE #> noisette -0.2125969 0.16739109 -0.100518284 FALSE #> vert 0.1617534 0.33903957 0.087597437 FALSE #> bleu 0.5474139 -0.08295428 -0.004709408 FALSE ## Get column coordinates head(get_coordinates(X, margin = 2)) #> F1 F2 F3 .sup #> brun -0.5045624 -0.21482046 0.05550909 FALSE #> chatain -0.1482527 0.03266635 -0.04880414 FALSE #> roux -0.1295233 0.31964240 0.08315117 FALSE #> blond 0.8353478 -0.06957934 0.01621471 FALSE ## Get row distances to centroid head(get_distances(X, margin = 1)) #> marron noisette vert bleu #> 0.25048691 0.08332116 0.14878530 0.30656555 ## Get row inertias head(get_inertia(X, margin = 1)) #> marron noisette vert bleu #> 0.09308635 0.01308930 0.01608490 0.11133715 ## Get row contributions head(get_contributions(X, margin = 1)) #> F1 F2 F3 #> marron 43.115744 13.04249 6.6795992 #> noisette 3.400961 19.80398 61.0855951 #> vert 1.354851 55.90952 31.9248234 #> bleu 52.128445 11.24401 0.3099822 ## Get eigenvalues get_eigenvalues(X) #> eigenvalues variance cumulative #> F1 0.208772652 89.372732 89.37273 #> F2 0.022226615 9.514911 98.88764 #> F3 0.002598439 1.112356 100.00000"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MCA-class.html","id":null,"dir":"Reference","previous_headings":"","what":"MCA Results — MCA-class","title":"MCA Results — MCA-class","text":"S4 class store results multiple correspondence analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MCA-class.html","id":"note","dir":"Reference","previous_headings":"","what":"Note","title":"MCA Results — MCA-class","text":"class inherits CA.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MCA-class.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"MCA Results — MCA-class","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateAnalysis.html","id":null,"dir":"Reference","previous_headings":"","what":"Output of Multivariate Data Analysis — MultivariateAnalysis","title":"Output of Multivariate Data Analysis — MultivariateAnalysis","text":"virtual S4 class store output multivariate data analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateAnalysis.html","id":"slots","dir":"Reference","previous_headings":"","what":"Slots","title":"Output of Multivariate Data Analysis — MultivariateAnalysis","text":"data numeric matrix. dimension integer giving dimension solution. singular_values numeric vector giving singular values. rows MultivariateResults object. columns MultivariateResults object.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateAnalysis.html","id":"subset","dir":"Reference","previous_headings":"","what":"Subset","title":"Output of Multivariate Data Analysis — MultivariateAnalysis","text":"code snippets , x MultivariateAnalysis object. x[[]] Extracts information slot selected subscript . length-one character vector.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateAnalysis.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Output of Multivariate Data Analysis — MultivariateAnalysis","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateBootstrap.html","id":null,"dir":"Reference","previous_headings":"","what":"Output of Bootstrap Replications — MultivariateBootstrap","title":"Output of Bootstrap Replications — MultivariateBootstrap","text":"virtual S4 class store output bootstrap analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateBootstrap.html","id":"slots","dir":"Reference","previous_headings":"","what":"Slots","title":"Output of Bootstrap Replications — MultivariateBootstrap","text":"replications integer giving number bootstrap replications.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateBootstrap.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Output of Bootstrap Replications — MultivariateBootstrap","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateResults.html","id":null,"dir":"Reference","previous_headings":"","what":"Multivariate Data Analysis Results — MultivariateResults","title":"Multivariate Data Analysis Results — MultivariateResults","text":"S4 class store results multivariate data analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateResults.html","id":"slots","dir":"Reference","previous_headings":"","what":"Slots","title":"Multivariate Data Analysis Results — MultivariateResults","text":"names character vector specifying row names. principal numeric matrix giving principal coordinates. standard numeric matrix giving standard coordinates. contributions numeric matrix giving contributions definition dimensions. cosine numeric matrix giving \\(cos^2\\) values. distances numeric vector giving distances centroid. weights numeric vector giving masses/weights. supplement logical vector specifying supplementary points. order integer vector giving original indices data (computation moves supplementary points end results). groups character vector specifying class observation.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateResults.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Multivariate Data Analysis Results — MultivariateResults","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateSummary.html","id":null,"dir":"Reference","previous_headings":"","what":"Summary of Multivariate Data Analysis — MultivariateSummary","title":"Summary of Multivariate Data Analysis — MultivariateSummary","text":"virtual S4 class store summary multivariate data analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateSummary.html","id":"slots","dir":"Reference","previous_headings":"","what":"Slots","title":"Summary of Multivariate Data Analysis — MultivariateSummary","text":"data numeric matrix. eigenvalues numeric matrix. results numeric matrix. supplement logical vector specifying supplementary points. margin integer.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/MultivariateSummary.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Summary of Multivariate Data Analysis — MultivariateSummary","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/PCA-class.html","id":null,"dir":"Reference","previous_headings":"","what":"PCA Results — PCA-class","title":"PCA Results — PCA-class","text":"S4 class store results principal components analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/PCA-class.html","id":"slots","dir":"Reference","previous_headings":"","what":"Slots","title":"PCA Results — PCA-class","text":"center numeric vector giving column mean initial dataset (active individuals ). scale numeric vector giving column standard deviations initial dataset (active individuals ).","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/PCA-class.html","id":"note","dir":"Reference","previous_headings":"","what":"Note","title":"PCA Results — PCA-class","text":"class inherits MultivariateAnalysis.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/PCA-class.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"PCA Results — PCA-class","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/PCA-class.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"PCA Results — PCA-class","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE, sup_row = sample(150, 10), sup_col = 2) #> 1 qualitative variable was removed: Species. ## Get row coordinates head(get_coordinates(X, margin = 1)) #> F1 F2 .sup #> 1 -2.038822 0.30343996 FALSE #> 2 -2.174225 0.10641058 FALSE #> 3 -2.343292 -0.07580517 FALSE #> 4 -2.343668 -0.20394712 FALSE #> 5 -2.106523 0.20492527 FALSE #> 6 -1.581835 0.41785687 FALSE ## Get column coordinates head(get_coordinates(X, margin = 2)) #> F1 F2 .sup #> Sepal.Length 0.9308544 0.3643509 FALSE #> Petal.Length 0.9840002 -0.1164774 FALSE #> Petal.Width 0.9662991 -0.2323751 FALSE #> Sepal.Width -0.3126997 0.4643739 TRUE ## Get correlations between variables and dimensions head(get_correlations(X)) #> F1 F2 .sup #> Sepal.Length 0.9308544 0.3643509 FALSE #> Petal.Length 0.9840002 -0.1164774 FALSE #> Petal.Width 0.9662991 -0.2323751 FALSE #> Sepal.Width -0.3126997 0.4643739 TRUE ## Get eigenvalues get_eigenvalues(X) #> eigenvalues variance cumulative #> F1 2.7684805 93.252596 93.2526 #> F2 0.2003167 6.747404 100.0000"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/benthos.html","id":null,"dir":"Reference","previous_headings":"","what":"Benthos — benthos","title":"Benthos — benthos","text":"Abundances Marine Species Sea-Bed Samples","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/benthos.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Benthos — benthos","text":"","code":"benthos"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/benthos.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Benthos — benthos","text":"data.frame 13 columns (sites) 92 rows (species).","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/benthos.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Benthos — benthos","text":"http://www.carme-n.org/?sec=data7","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":null,"dir":"Reference","previous_headings":"","what":"Biplot — biplot","title":"Biplot — biplot","text":"Biplot","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Biplot — biplot","text":"","code":"# S4 method for CA biplot( x, ..., axes = c(1, 2), type = c(\"symetric\", \"rows\", \"columns\", \"contributions\"), active = TRUE, sup = TRUE, labels = NULL, col.rows = c(\"#E69F00\", \"#009E73\"), col.columns = c(\"#56B4E9\", \"#F0E442\"), cex.rows = graphics::par(\"cex\"), cex.columns = graphics::par(\"cex\"), pch.rows = 16, pch.columns = 17, xlim = NULL, ylim = NULL, main = NULL, sub = NULL, legend = list(x = \"topleft\") ) # S4 method for PCA biplot( x, ..., axes = c(1, 2), type = c(\"form\", \"covariance\"), active = TRUE, sup = TRUE, labels = \"variables\", col.rows = c(\"#E69F00\", \"#009E73\"), col.columns = c(\"#56B4E9\", \"#F0E442\"), pch = 16, cex = 1, lty = 1, lwd = 2, xlim = NULL, ylim = NULL, main = NULL, sub = NULL, legend = list(x = \"topleft\") )"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Biplot — biplot","text":"x CA, MCA PCA object. ... Currently used. axes length-two numeric vector giving dimensions plotted. type character string specifying biplot plotted (see ). must one \"rows\", \"columns\", \"contribution\" (CA), \"form\" \"covariance\" (PCA). unambiguous substring can given. active logical scalar: active observations plotted? sup logical scalar: supplementary observations plotted? labels character vector specifying whether \"rows\"/\"individuals\" /\"columns\"/\"variables\" names must drawn. unambiguous substring can given. col.rows length-two vector color specification active supplementary rows. col.columns length-two vector color specification active supplementary columns. xlim length-two numeric vector giving x limits plot. default value, NULL, indicates range finite values plotted used. ylim length-two numeric vector giving y limits plot. default value, NULL, indicates range finite values plotted used. main character string giving main title plot. sub character string giving subtitle plot. legend list additional arguments passed graphics::legend(); names list used argument names. NULL, legend displayed. pch, pch.rows, pch.columns symbol specification. cex, cex.rows, cex.columns numeric vector giving amount plotting characters symbols scaled relative default. lty, lwd specification line type width.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Biplot — biplot","text":"biplot() called side-effects: results graphic displayed. Invisibly returns x.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":"details","dir":"Reference","previous_headings":"","what":"Details","title":"Biplot — biplot","text":"biplot simultaneous representation rows columns rectangular dataset. generalization scatterplot case mutlivariate data: allows visualize much information possible single graph (Greenacre 2010). Biplots drawbacks advantages: can quickly become difficult read display lot information . may preferable visualize results individuals variables separately.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":"pca-biplots","dir":"Reference","previous_headings":"","what":"PCA Biplots","title":"Biplot — biplot","text":"form (row-metric-preserving) form biplot favors representation individuals: distance individuals approximates Euclidean distance rows. form biplot length vector approximates quality representation variable. covariance (column-metric-preserving) covariance biplot favors representation variables: length vector approximates standard deviation variable cosine angle formed two vectors approximates correlation two variables. covariance biplot distance individuals approximates Mahalanobis distance rows.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":"ca-biplots","dir":"Reference","previous_headings":"","what":"CA Biplots","title":"Biplot — biplot","text":"symetric (symetric biplot) Represents row column profiles simultaneously common space: rows columns standard coordinates. Note inter-distance row column items meaningful. rows (asymetric biplot) Row principal biplot (row-metric-preserving) rows principal coordinates columns standard coordinates. columns (asymetric biplot) Column principal biplot (column-metric-preserving) rows standard coordinates columns principal coordinates. contribution (asymetric biplot) Contribution biplot rows principal coordinates columns standard coordinates multiplied square roots masses.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":"references","dir":"Reference","previous_headings":"","what":"References","title":"Biplot — biplot","text":"Aitchison, J. Greenacre, M. J. (2002). Biplots Compositional Data. Journal Royal Statistical Society: Series C (Applied Statistics), 51(4): 375-92. doi:10.1111/1467-9876.00275 . Greenacre, M. J. (2010). Biplots Practice. Bilbao: Fundación BBVA.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Biplot — biplot","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/biplot.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Biplot — biplot","text":"","code":"## Replicate examples from Greenacre 2007, p. 59-68 data(\"countries\") ## Compute principal components analysis ## All rows and all columns obtain the same weight row_w <- rep(1 / nrow(countries), nrow(countries)) # 1/13 col_w <- rep(1 / ncol(countries), ncol(countries)) # 1/6 Y <- pca(countries, scale = FALSE, weight_row = row_w, weight_col = col_w) ## Row-metric-preserving biplot (form biplot) biplot(Y, type = \"form\") ## Column-metric-preserving biplot (covariance biplot) biplot(Y, type = \"covariance\") ## Replicate examples from Greenacre 2007, p. 79-88 data(\"benthos\") ## Compute correspondence analysis X <- ca(benthos) ## Symetric CA biplot biplot(X, labels = \"columns\") ## Row principal CA biplot biplot(X, type = \"row\", labels = \"columns\") ## Column principal CA biplot biplot(X, type = \"column\", labels = \"columns\") ## Contribution CA biplot biplot(X, type = \"contrib\", labels = NULL)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/bootstrap.html","id":null,"dir":"Reference","previous_headings":"","what":"Partial Bootstrap Analysis — boot","title":"Partial Bootstrap Analysis — boot","text":"Checks analysis partial bootstrap resampling.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/bootstrap.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Partial Bootstrap Analysis — boot","text":"","code":"# S4 method for CA bootstrap(object, n = 30) # S4 method for PCA bootstrap(object, n = 30)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/bootstrap.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Partial Bootstrap Analysis — boot","text":"object CA PCA object. n non-negative integer giving number bootstrap replications.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/bootstrap.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Partial Bootstrap Analysis — boot","text":"Returns BootstrapCA BootstrapPCA object.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/bootstrap.html","id":"references","dir":"Reference","previous_headings":"","what":"References","title":"Partial Bootstrap Analysis — boot","text":"Greenacre, Michael J. Theory Applications Correspondence Analysis. London: Academic Press, 1984. Lebart, L., Piron, M. Morineau, . Statistique exploratoire multidimensionnelle: visualisation et inférence en fouille de données. Paris: Dunod, 2006. Lockyear, K. (2013). Applying Bootstrapped Correspondence Analysis Archaeological Data. Journal Archaeological Science, 40(12): 4744-4753. doi:10.1016/j.jas.2012.08.035 . Ringrose, T. J. (1992). Bootstrapping Correspondence Analysis Archaeology. Journal Archaeological Science, 19(6): 615-629. doi:10.1016/0305-4403(92)90032-X .","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/bootstrap.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Partial Bootstrap Analysis — boot","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/bootstrap.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Partial Bootstrap Analysis — boot","text":"","code":"## Bootstrap on CA ## Data from Lebart et al. 2006, p. 170-172 data(\"colours\") ## Compute correspondence analysis X <- ca(colours) ## Bootstrap (30 replicates) Y <- bootstrap(X, n = 30) if (FALSE) { ## Get replicated coordinates get_replications(Y, margin = 1) get_replications(Y, margin = 2) } ## Plot with ellipses viz_rows(Y) viz_tolerance(Y, margin = 1, level = c(0.68, 0.95)) viz_columns(Y) viz_tolerance(Y, margin = 2, level = c(0.68, 0.95)) ## Plot with convex hulls viz_columns(Y) viz_hull(Y, margin = 2) ## Bootstrap on PCA ## Compute principal components analysis data(\"iris\") X <- pca(iris) #> 1 qualitative variable was removed: Species. ## Bootstrap (30 replicates) Y <- bootstrap(X, n = 30) ## Plot with ellipses viz_variables(Y) viz_tolerance(Y, margin = 2, level = c(0.68, 0.95))"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/burt.html","id":null,"dir":"Reference","previous_headings":"","what":"Burt Table — burt","title":"Burt Table — burt","text":"Computes burt table factor table.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/burt.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Burt Table — burt","text":"","code":"burt(object, ...) # S4 method for data.frame burt(object, exclude = NULL, abbrev = TRUE)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/burt.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Burt Table — burt","text":"object data.frame. ... Currently used. exclude vector values excluded forming set levels (see factor()). NULL (default), make NA extra level. abbrev logical scalar: column names abbreviated? FALSE, form 'factor_level' abbrev = TRUE just 'level' suffice factors distinct levels.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/burt.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Burt Table — burt","text":"symetric matrix.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/burt.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Burt Table — burt","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/burt.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Burt Table — burt","text":"","code":"## Create a factor table x <- data.frame( A = c(\"a\", \"b\", \"a\"), B = c(\"x\", \"y\", \"z\") ) ## Complete disjunctive table cdt(x) #> a b x y z #> [1,] 1 0 1 0 0 #> [2,] 0 1 0 1 0 #> [3,] 1 0 0 0 1 ## Burt table burt(x) #> a b x y z #> a 2 0 1 0 1 #> b 0 1 0 1 0 #> x 1 0 1 0 0 #> y 0 1 0 1 0 #> z 1 0 0 0 1"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/ca.html","id":null,"dir":"Reference","previous_headings":"","what":"Correspondence Analysis — ca","title":"Correspondence Analysis — ca","text":"Computes simple correspondence analysis based singular value decomposition.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/ca.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Correspondence Analysis — ca","text":"","code":"ca(object, ...) # S4 method for data.frame ca(object, rank = NULL, sup_row = NULL, sup_col = NULL) # S4 method for matrix ca(object, rank = NULL, sup_row = NULL, sup_col = NULL)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/ca.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Correspondence Analysis — ca","text":"object \\(m \\times p\\) numeric matrix data.frame. ... Currently used. rank integer value specifying maximal number components kept results. NULL (default), \\(min(m, p) - 1\\) components returned. sup_row vector specifying indices supplementary rows. sup_col vector specifying indices supplementary columns.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/ca.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Correspondence Analysis — ca","text":"CA object.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/ca.html","id":"references","dir":"Reference","previous_headings":"","what":"References","title":"Correspondence Analysis — ca","text":"Greenacre, M. J. Theory Applications Correspondence Analysis. London: Academic Press, 1984. Greenacre, M. J. Correspondence Analysis Practice. Seconde edition. Interdisciplinary Statistics Series. Boca Raton: Chapman & Hall/CRC, 2007. Lebart, L., Piron, M. Morineau, . Statistique exploratoire multidimensionnelle: visualisation et inférence en fouille de données. Paris: Dunod, 2006.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/ca.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Correspondence Analysis — ca","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/ca.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Correspondence Analysis — ca","text":"","code":"## Data from Lebart et al. 2006, p. 170-172 data(\"colours\") ## The chi square of independence between the two variables stats::chisq.test(colours) #> #> \tPearson's Chi-squared test #> #> data: colours #> X-squared = 138.29, df = 9, p-value < 2.2e-16 #> ## Compute correspondence analysis X <- ca(colours) ## Plot rows viz_rows(X, labels = TRUE) ## Plot columns viz_columns(X, labels = TRUE) ## Get row coordinates head(get_coordinates(X, margin = 1)) #> F1 F2 F3 .sup #> marron -0.4921577 -0.08832151 0.021611305 FALSE #> noisette -0.2125969 0.16739109 -0.100518284 FALSE #> vert 0.1617534 0.33903957 0.087597437 FALSE #> bleu 0.5474139 -0.08295428 -0.004709408 FALSE ## Get column coordinates head(get_coordinates(X, margin = 2)) #> F1 F2 F3 .sup #> brun -0.5045624 -0.21482046 0.05550909 FALSE #> chatain -0.1482527 0.03266635 -0.04880414 FALSE #> roux -0.1295233 0.31964240 0.08315117 FALSE #> blond 0.8353478 -0.06957934 0.01621471 FALSE ## Get row distances to centroid head(get_distances(X, margin = 1)) #> marron noisette vert bleu #> 0.25048691 0.08332116 0.14878530 0.30656555 ## Get row inertias head(get_inertia(X, margin = 1)) #> marron noisette vert bleu #> 0.09308635 0.01308930 0.01608490 0.11133715 ## Get row contributions head(get_contributions(X, margin = 1)) #> F1 F2 F3 #> marron 43.115744 13.04249 6.6795992 #> noisette 3.400961 19.80398 61.0855951 #> vert 1.354851 55.90952 31.9248234 #> bleu 52.128445 11.24401 0.3099822 ## Get eigenvalues get_eigenvalues(X) #> eigenvalues variance cumulative #> F1 0.208772652 89.372732 89.37273 #> F2 0.022226615 9.514911 98.88764 #> F3 0.002598439 1.112356 100.00000"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/cdt.html","id":null,"dir":"Reference","previous_headings":"","what":"Complete Disjunctive Table — cdt","title":"Complete Disjunctive Table — cdt","text":"Computes complete disjunctive table factor table.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/cdt.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Complete Disjunctive Table — cdt","text":"","code":"cdt(object, ...) # S4 method for matrix cdt(object, exclude = NULL, abbrev = TRUE) # S4 method for data.frame cdt(object, exclude = NULL, abbrev = TRUE)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/cdt.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Complete Disjunctive Table — cdt","text":"object data.frame. ... Currently used. exclude vector values excluded forming set levels (see factor()). NULL (default), make NA extra level. abbrev logical scalar: column names abbreviated? FALSE, form 'factor_level' abbrev = TRUE just 'level' suffice factors distinct levels.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/cdt.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Complete Disjunctive Table — cdt","text":"data.frame.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/cdt.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Complete Disjunctive Table — cdt","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/cdt.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Complete Disjunctive Table — cdt","text":"","code":"## Create a factor table x <- data.frame( A = c(\"a\", \"b\", \"a\"), B = c(\"x\", \"y\", \"z\") ) ## Complete disjunctive table cdt(x) #> a b x y z #> [1,] 1 0 1 0 0 #> [2,] 0 1 0 1 0 #> [3,] 1 0 0 0 1 ## Burt table burt(x) #> a b x y z #> a 2 0 1 0 1 #> b 0 1 0 1 0 #> x 1 0 1 0 0 #> y 0 1 0 1 0 #> z 1 0 0 0 1"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/colours.html","id":null,"dir":"Reference","previous_headings":"","what":"Colours — colours","title":"Colours — colours","text":"Contingency table eye hair colours different individuals.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/colours.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Colours — colours","text":"","code":"colours"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/colours.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Colours — colours","text":"data.frame 4 columns (hair colours) 4 rows (eye colours).","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/colours.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Colours — colours","text":"Lebart, L., Piron, M. Morineau, . Statistique exploratoire multidimensionnelle: visualisation et inférence en fouille de données. Paris: Dunod, 2006, p. 170-172","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/countries.html","id":null,"dir":"Reference","previous_headings":"","what":"Countries — countries","title":"Countries — countries","text":"Student ratings 13 countries six attributes.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/countries.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Countries — countries","text":"","code":"countries"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/countries.html","id":"format","dir":"Reference","previous_headings":"","what":"Format","title":"Countries — countries","text":"data.frame 6 columns (attributes) 13 rows (countries).","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/countries.html","id":"source","dir":"Reference","previous_headings":"","what":"Source","title":"Countries — countries","text":"Greenacre, M. J. Biplots Practice. Bilbao: Fundación BBVA, 2010.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/dimensio-deprecated.html","id":null,"dir":"Reference","previous_headings":"","what":"Deprecated Functions in dimensio — dimensio-deprecated","title":"Deprecated Functions in dimensio — dimensio-deprecated","text":"functions still work removed (defunct) next version.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/dimensio-deprecated.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Deprecated Functions in dimensio — dimensio-deprecated","text":"","code":"stat_hull( mapping = NULL, data = NULL, geom = \"polygon\", position = \"identity\", na.rm = FALSE, show.legend = NA, inherit.aes = TRUE, ... ) plot_rows(object, ...) # S4 method for MultivariateAnalysis plot_rows( object, axes = c(1, 2), active = TRUE, sup = TRUE, alpha = NULL, colour = NULL, fill = NULL, shape = NULL, size = NULL, group = NULL ) plot_columns(object, ...) # S4 method for MultivariateAnalysis plot_columns( object, axes = c(1, 2), active = TRUE, sup = TRUE, alpha = NULL, colour = NULL, fill = NULL, shape = NULL, size = NULL, group = NULL ) # S4 method for BootstrapPCA plot_columns( object, axes = c(1, 2), active = TRUE, sup = TRUE, alpha = NULL, colour = NULL, fill = NULL, shape = NULL, size = NULL, group = NULL ) plot_individuals(object, ...) # S4 method for PCA plot_individuals( object, axes = c(1, 2), active = TRUE, sup = TRUE, alpha = NULL, colour = NULL, fill = NULL, shape = NULL, size = NULL, group = NULL ) plot_variables(object, ...) # S4 method for PCA plot_variables( object, axes = c(1, 2), active = TRUE, sup = TRUE, alpha = NULL, colour = NULL, linetype = NULL, size = NULL, group = NULL ) plot_variance(object, ...) # S4 method for MultivariateAnalysis plot_variance( object, select = NULL, variance = TRUE, cumulative = TRUE, fill = \"grey30\", border = \"grey10\", colour = \"red\" ) plot_contributions(object, ...) # S4 method for MultivariateAnalysis plot_contributions( object, margin = 2, axes = 1, sort = TRUE, decreasing = TRUE, limit = 10, fill = \"grey30\", border = \"grey10\" ) plot_cos2(object, ...) # S4 method for MultivariateAnalysis plot_cos2( object, margin = 2, axes = c(1, 2), active = TRUE, sup = TRUE, sort = TRUE, decreasing = TRUE, limit = 10, fill = \"grey30\", border = \"grey10\" )"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/dimensio-package.html","id":null,"dir":"Reference","previous_headings":"","what":"dimensio: Multivariate Data Analysis — dimensio-package","title":"dimensio: Multivariate Data Analysis — dimensio-package","text":"Simple Principal Components Analysis (PCA) (Multiple) Correspondence Analysis (CA) based Singular Value Decomposition (SVD). package provides S4 classes methods compute, extract, summarize visualize results multivariate data analysis. also includes methods partial bootstrap validation described Greenacre (1984) Lebart et al. (2006) .","code":""},{"path":[]},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/dimensio-package.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"dimensio: Multivariate Data Analysis — dimensio-package","text":"Full list authors contributors (alphabetic order) Package maintainer Nicolas Frerebeaunicolas.frerebeau@u-bordeaux-montaigne.fr Archéosciences Bordeaux (UMR 6034) Maison de l'Archéologie Université Bordeaux Montaigne F-33607 Pessac cedex France","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/dimnames.html","id":null,"dir":"Reference","previous_headings":"","what":"Dimnames of an Object — dimnames","title":"Dimnames of an Object — dimnames","text":"Retrieve set dimnames object.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/dimnames.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Dimnames of an Object — dimnames","text":"","code":"# S4 method for MultivariateAnalysis dim(x) # S4 method for MultivariateAnalysis rownames(x, do.NULL = TRUE, prefix = \"row\") # S4 method for MultivariateAnalysis colnames(x, do.NULL = TRUE, prefix = \"col\") # S4 method for MultivariateAnalysis dimnames(x)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/dimnames.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Dimnames of an Object — dimnames","text":"x object retrieve row column names (CA PCA object). .NULL logical scalar. FALSE names NULL, names created. prefix character string specifying prefix created names.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/dimnames.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Dimnames of an Object — dimnames","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_contributions.html","id":null,"dir":"Reference","previous_headings":"","what":"Get Contributions — get_contributions","title":"Get Contributions — get_contributions","text":"Get Contributions","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_contributions.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Get Contributions — get_contributions","text":"","code":"get_contributions(x, ...) get_correlations(x, ...) get_cos2(x, ...) # S4 method for MultivariateAnalysis get_contributions(x, margin = 1) # S4 method for PCA get_correlations(x, sup_name = \".sup\") # S4 method for MultivariateAnalysis get_cos2(x, margin = 1, sup_name = \".sup\")"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_contributions.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Get Contributions — get_contributions","text":"x object get element(s) (CA, MCA PCA object). ... Currently used. margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns. sup_name character string specifying name column create supplementary points attribution (see ).","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_contributions.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Get Contributions — get_contributions","text":"get_contributions() returns data.frame contributions definition principal dimensions. get_correlations() returns data.frame correlations variables dimensions (PCA). extra column (named sup_name) added specifying whether observation supplementary point . get_cos2() returns data.frame \\(cos^2\\) values (.e. quality representation points factor map). extra column (named sup_name) added specifying whether observation supplementary point .","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_contributions.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Get Contributions — get_contributions","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_coordinates.html","id":null,"dir":"Reference","previous_headings":"","what":"Get Coordinates — get_coordinates","title":"Get Coordinates — get_coordinates","text":"Get Coordinates","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_coordinates.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Get Coordinates — get_coordinates","text":"","code":"get_coordinates(x, ...) get_replications(x, ...) # S4 method for MultivariateAnalysis get_coordinates(x, margin = 1, principal = TRUE, sup_name = \".sup\") # S4 method for MultivariateBootstrap get_replications(x, margin = 1) # S4 method for BootstrapPCA get_replications(x)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_coordinates.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Get Coordinates — get_coordinates","text":"x object get element(s) (CA, MCA PCA object). ... Currently used. margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns. principal logical scalar: principal coordinates returned? FALSE, standard coordinates returned. sup_name character string specifying name column create supplementary points attribution (see ).","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_coordinates.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Get Coordinates — get_coordinates","text":"get_coordinates() returns data.frame coordinates. extra column (named sup_name) added specifying whether observation supplementary point . get_replications() returns array coordinates.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_coordinates.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Get Coordinates — get_coordinates","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_coordinates.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Get Coordinates — get_coordinates","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE, sup_row = 5:10) #> 1 qualitative variable was removed: Species. ## Get row principal coordinates head(get_coordinates(X, margin = 1, principal = TRUE)) #> F1 F2 F3 .sup #> 1 -2.385846 0.5084067 -0.12383101 FALSE #> 2 -2.215654 -0.6515155 -0.23313750 FALSE #> 3 -2.496566 -0.3169280 0.04974232 FALSE #> 4 -2.433607 -0.5744432 0.09690301 FALSE #> 11 -2.279483 1.0742447 -0.26629760 FALSE #> 12 -2.450871 0.1591839 0.09988982 FALSE ## Get row standard coordinates head(get_coordinates(X, margin = 1, principal = FALSE)) #> F1 F2 F3 .sup #> 1 -1.403075 0.5268995 -0.3142569 FALSE #> 2 -1.302987 -0.6752138 -0.5916536 FALSE #> 3 -1.468187 -0.3284560 0.1262355 FALSE #> 4 -1.431162 -0.5953380 0.2459193 FALSE #> 11 -1.340525 1.1133193 -0.6758069 FALSE #> 12 -1.441315 0.1649741 0.2534992 FALSE ## Tidy principal coordinates head(tidy(X, margin = 1)) #> label component supplementary coordinate contribution cos2 #> 1 1 F1 FALSE -2.3858463 1.36709655 0.954033073 #> 2 1 F2 FALSE 0.5084067 0.19279380 0.043321256 #> 3 1 F3 FALSE -0.1238310 0.06858151 0.002570025 #> 4 10 F1 TRUE -2.3173283 NA 0.953213276 #> 5 10 F2 TRUE -0.4448514 NA 0.035127301 #> 6 10 F3 TRUE -0.2525218 NA 0.011319124 head(tidy(X, margin = 2)) #> label component supplementary coordinate contribution cos2 #> 1 Petal.Length F1 FALSE 0.99121597 33.97921607 0.9825091061 #> 2 Petal.Length F2 FALSE 0.01655680 0.02944324 0.0002741275 #> 3 Petal.Length F3 FALSE 0.05477927 1.93260521 0.0030007681 #> 4 Petal.Width F1 FALSE 0.96350955 32.10619376 0.9283506618 #> 5 Petal.Width F2 FALSE 0.05756108 0.35586957 0.0033132775 #> 6 Petal.Width F3 FALSE 0.24948796 40.08758618 0.0622442430 head(augment(X, margin = 1, axes = c(1, 2))) #> F1 F2 label supplementary mass sum contribution #> 1 -2.385846 0.5084067 1 FALSE 0.006944444 5.950740 4.132458 #> 2 -2.215654 -0.6515155 2 FALSE 0.006944444 5.333593 3.703884 #> 3 -2.496566 -0.3169280 3 FALSE 0.006944444 6.333284 4.398114 #> 4 -2.433607 -0.5744432 4 FALSE 0.006944444 6.252426 4.341962 #> 5 -2.279483 1.0742447 11 FALSE 0.006944444 6.350046 4.409754 #> 6 -2.450871 0.1591839 12 FALSE 0.006944444 6.032107 4.188963 #> cos2 #> 1 0.9973543 #> 2 0.9880287 #> 3 0.9995093 #> 4 0.9977072 #> 5 0.9889258 #> 6 0.9951651 head(augment(X, margin = 2, axes = c(1, 2))) #> F1 F2 label supplementary mass sum contribution #> 1 0.8875399 0.36087785 Sepal.Length FALSE 1 0.9179599 91.79599 #> 2 -0.4392190 0.89286998 Sepal.Width FALSE 1 0.9901302 99.01302 #> 3 0.9912160 0.01655680 Petal.Length FALSE 1 0.9827832 98.27832 #> 4 0.9635096 0.05756108 Petal.Width FALSE 1 0.9316639 93.16639 #> cos2 #> 1 0.9179599 #> 2 0.9901302 #> 3 0.9827832 #> 4 0.9316639"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_data.html","id":null,"dir":"Reference","previous_headings":"","what":"Get Original Data — get_data","title":"Get Original Data — get_data","text":"Get Original Data","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_data.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Get Original Data — get_data","text":"","code":"get_data(x, ...) # S4 method for MultivariateAnalysis get_data(x)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_data.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Get Original Data — get_data","text":"x object get element(s) (CA, MCA PCA object). ... Currently used.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_data.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Get Original Data — get_data","text":"Returns data.frame original data.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_data.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Get Original Data — get_data","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_distances.html","id":null,"dir":"Reference","previous_headings":"","what":"Get Distances — get_distances","title":"Get Distances — get_distances","text":"Get Distances","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_distances.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Get Distances — get_distances","text":"","code":"get_distances(x, ...) # S4 method for MultivariateAnalysis get_distances(x, margin = 1)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_distances.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Get Distances — get_distances","text":"x object get element(s) (CA, MCA PCA object). ... Currently used. margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_distances.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Get Distances — get_distances","text":"numeric vector squared distance centroide.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_distances.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Get Distances — get_distances","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_eigenvalues.html","id":null,"dir":"Reference","previous_headings":"","what":"Get Eigenvalues — get_eigenvalues","title":"Get Eigenvalues — get_eigenvalues","text":"Get Eigenvalues","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_eigenvalues.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Get Eigenvalues — get_eigenvalues","text":"","code":"get_eigenvalues(x) get_inertia(x, ...) get_variance(x, ...) # S4 method for MultivariateAnalysis get_eigenvalues(x) # S4 method for MultivariateAnalysis get_inertia(x, margin = 1) # S4 method for MultivariateAnalysis get_variance(x, digits = 2)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_eigenvalues.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Get Eigenvalues — get_eigenvalues","text":"x object get element(s) (CA, MCA PCA object). ... Currently used. margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns. digits integer indicating number decimal places used.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_eigenvalues.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Get Eigenvalues — get_eigenvalues","text":"get_eigenvalues() returns data.frame following columns: eigenvalues, variance (percentage variance) cumulative (cumulative percentage variance). get_variance() returns numeric vector giving percentage explained variance dimension. get_inertia() returns numeric vector.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/get_eigenvalues.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Get Eigenvalues — get_eigenvalues","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/loadings.html","id":null,"dir":"Reference","previous_headings":"","what":"Extract Loadings — loadings","title":"Extract Loadings — loadings","text":"Extract loadingsin principal components analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/loadings.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Extract Loadings — loadings","text":"","code":"# S4 method for PCA loadings(x)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/loadings.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Extract Loadings — loadings","text":"x PCA object.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/loadings.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Extract Loadings — loadings","text":"Returns variable loadings (.e. coefficients linear combination original variables).","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/loadings.html","id":"note","dir":"Reference","previous_headings":"","what":"Note","title":"Extract Loadings — loadings","text":"loadings() implemented consistency [stats][stats::loadings].","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/loadings.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Extract Loadings — loadings","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/mca.html","id":null,"dir":"Reference","previous_headings":"","what":"Multiple Correspondence Analysis — mca","title":"Multiple Correspondence Analysis — mca","text":"Computes multiple correspondence analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/mca.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Multiple Correspondence Analysis — mca","text":"","code":"mca(object, ...) # S4 method for data.frame mca(object, rank = NULL, sup_row = NULL, sup_col = NULL, sup_quanti = NULL) # S4 method for matrix mca(object, rank = NULL, sup_row = NULL, sup_col = NULL, sup_quanti = NULL)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/mca.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Multiple Correspondence Analysis — mca","text":"object \\(m \\times p\\) numeric matrix data.frame. ... Currently used. rank integer value specifying maximal number components kept results. NULL (default), \\(min(m, p) - 1\\) components returned. sup_row vector specifying indices supplementary rows. sup_col vector specifying indices supplementary categorical columns. sup_quanti vector specifying indices supplementary quantitative columns.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/mca.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Multiple Correspondence Analysis — mca","text":"MCA object.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/mca.html","id":"references","dir":"Reference","previous_headings":"","what":"References","title":"Multiple Correspondence Analysis — mca","text":"Lebart, L., Piron, M. Morineau, . Statistique exploratoire multidimensionnelle: visualisation et inférence en fouille de données. Paris: Dunod, 2006.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/mca.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Multiple Correspondence Analysis — mca","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/pca.html","id":null,"dir":"Reference","previous_headings":"","what":"Principal Components Analysis — pca","title":"Principal Components Analysis — pca","text":"Computes principal components analysis based singular value decomposition.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/pca.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Principal Components Analysis — pca","text":"","code":"pca(object, ...) # S4 method for data.frame pca( object, center = TRUE, scale = TRUE, rank = NULL, sup_row = NULL, sup_col = NULL, weight_row = NULL, weight_col = NULL ) # S4 method for matrix pca( object, center = TRUE, scale = TRUE, rank = NULL, sup_row = NULL, sup_col = NULL, weight_row = NULL, weight_col = NULL )"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/pca.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Principal Components Analysis — pca","text":"object \\(m \\times p\\) numeric matrix data.frame. ... Currently used. center logical scalar: variables shifted zero centered? scale logical scalar: variables scaled unit variance? rank integer value specifying maximal number components kept results. NULL (default), \\(p - 1\\) components returned. sup_row vector specifying indices supplementary rows. sup_col vector specifying indices supplementary columns. weight_row numeric vector specifying active row (individual) weights. NULL (default), uniform weights used. Row weights internally normalized sum 1 weight_col numeric vector specifying active column (variable) weights. NULL (default), uniform weights (1) used.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/pca.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Principal Components Analysis — pca","text":"PCA object.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/pca.html","id":"references","dir":"Reference","previous_headings":"","what":"References","title":"Principal Components Analysis — pca","text":"Lebart, L., Piron, M. Morineau, . Statistique exploratoire multidimensionnelle: visualisation et inférence en fouille de données. Paris: Dunod, 2006.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/pca.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Principal Components Analysis — pca","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/pca.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Principal Components Analysis — pca","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE, sup_row = sample(150, 10), sup_col = 2) #> 1 qualitative variable was removed: Species. ## Get row coordinates head(get_coordinates(X, margin = 1)) #> F1 F2 .sup #> 1 -2.079218 0.29865902 FALSE #> 2 -2.217337 0.09684061 FALSE #> 3 -2.389419 -0.08978021 FALSE #> 7 -2.348014 -0.27354012 FALSE #> 8 -2.114316 0.18255224 FALSE #> 9 -2.562635 -0.40770540 FALSE ## Get column coordinates head(get_coordinates(X, margin = 2)) #> F1 F2 .sup #> Sepal.Length 0.9277166 0.3723421 FALSE #> Petal.Length 0.9835384 -0.1208904 FALSE #> Petal.Width 0.9657049 -0.2345722 FALSE #> Sepal.Width -0.3356727 0.4451266 TRUE ## Get correlations between variables and dimensions head(get_correlations(X)) #> F1 F2 .sup #> Sepal.Length 0.9277166 0.3723421 FALSE #> Petal.Length 0.9835384 -0.1208904 FALSE #> Petal.Width 0.9657049 -0.2345722 FALSE #> Sepal.Width -0.3356727 0.4451266 TRUE ## Get eigenvalues get_eigenvalues(X) #> eigenvalues variance cumulative #> F1 2.7605919 92.984627 92.98463 #> F2 0.2082772 7.015373 100.00000"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/predict.html","id":null,"dir":"Reference","previous_headings":"","what":"Predict New Coordinates — predict","title":"Predict New Coordinates — predict","text":"Predict projection new individuals/rows variables/columns.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/predict.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Predict New Coordinates — predict","text":"","code":"# S4 method for CA predict(object, newdata, margin = 1) # S4 method for PCA predict(object, newdata, margin = 1)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/predict.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Predict New Coordinates — predict","text":"object CA PCA object. newdata object supplementary points coercible matrix compute principal coordinates. margin length-one numeric vector giving subscript data predicted: 1 indicates individuals/rows (default), 2 indicates variables/columns.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/predict.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Predict New Coordinates — predict","text":"data.frame coordinates.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/predict.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Predict New Coordinates — predict","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/predict.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Predict New Coordinates — predict","text":"","code":"## Create a matrix A <- matrix(data = sample(1:10, 100, TRUE), nrow = 10, ncol = 10) ## Compute correspondence analysis X <- ca(A, sup_row = 8:10, sup_col = 7:10) ## Predict new row coordinates Y <- matrix(data = sample(1:10, 120, TRUE), nrow = 20, ncol = 6) predict(X, Y, margin = 1) #> F1 F2 F3 F4 F5 #> 1 0.24278415 0.4153749728 0.07257390 -0.097383675 0.118922779 #> 2 -0.47216906 0.1153913614 -0.01789554 -0.075059344 0.093455638 #> 3 0.49079198 0.1847260892 0.23802123 -0.177001312 -0.140452292 #> 4 -0.11097712 -0.3802202818 -0.15402983 0.337133180 0.111773585 #> 5 -0.19826077 0.2666014838 -0.10139952 -0.020183831 0.091185798 #> 6 0.08040509 -0.0498662832 -0.15737951 0.315663726 -0.024124961 #> 7 0.10659921 -0.0005990011 0.04768837 -0.075444307 0.203960072 #> 8 -0.28254580 -0.2176888085 -0.09217525 0.157057442 0.191688505 #> 9 0.34957249 0.0066677001 0.14511333 0.001687393 -0.443038476 #> 10 -0.36820316 0.3259796703 0.22053979 0.158327509 -0.015726437 #> 11 0.33172872 -0.6377648437 0.04015996 -0.223340171 -0.290311143 #> 12 -0.22590087 0.3273022479 -0.00919882 -0.484000025 -0.071073320 #> 13 0.30516764 -0.2733804680 0.45898982 0.487206057 -0.047877940 #> 14 -0.18882878 0.0916783260 -0.14459880 -0.108216350 -0.034722903 #> 15 0.17613277 0.2834408751 0.20501039 0.208716789 0.438267971 #> 16 -0.07265103 0.0548121102 0.35856644 0.034730071 -0.217258859 #> 17 0.16882833 0.3624723330 -0.04259558 0.209204614 0.079426707 #> 18 -0.18255261 -0.0891678661 0.10984542 -0.093106411 0.303157527 #> 19 0.21728633 -0.1274478305 -0.22935147 0.207323269 -0.005307477 #> 20 0.29045760 0.3602251332 0.44401923 0.329927074 0.440654190 ## Predict new column coordinates Z <- matrix(data = sample(1:10, 140, TRUE), nrow = 7, ncol = 20) predict(X, Z, margin = 2) #> F1 F2 F3 F4 F5 #> 1 0.40103075 -0.43485840 0.370745120 -0.187316175 -0.14236763 #> 2 -0.06073891 -0.06502427 -0.006173824 0.009009563 -0.23330581 #> 3 0.41479055 -0.26211354 0.114708621 -0.229117308 -0.21233212 #> 4 -0.27594192 0.25998065 0.021008376 -0.028977667 -0.29700550 #> 5 -0.04007132 -0.59571024 0.440569341 -0.143853971 0.21379966 #> 6 0.29826155 -0.55763938 0.379375075 -0.007750335 -0.34664509 #> 7 -0.20615276 -0.11574713 0.196243912 -0.126638903 0.36689381 #> 8 -0.05066656 -0.24692063 0.101953988 0.068454382 -0.17059727 #> 9 0.61902103 0.12792093 -0.037727946 -0.208935670 -0.52620099 #> 10 0.04333604 -0.23346100 0.412008487 0.080158289 -0.18081302 #> 11 0.20014141 0.08229970 0.426963531 -0.049447468 -0.26821297 #> 12 0.23098480 -0.28265471 0.260298508 -0.345082249 -0.17182670 #> 13 -0.33037429 -0.08670636 0.103794993 0.230594074 -0.46486930 #> 14 0.14002613 -0.48733471 0.035548246 -0.066758475 -0.21346143 #> 15 0.39621018 0.21986498 -0.156959357 -0.255086340 -0.05148005 #> 16 0.24977291 -0.14219109 0.053729554 -0.190876567 0.13851718 #> 17 0.05746184 -0.20561334 0.246529312 -0.248951879 -0.40185774 #> 18 -0.39608793 -0.26271245 0.457060688 -0.042555663 -0.54216706 #> 19 0.12518398 -0.10783761 0.058677248 -0.171676457 -0.24709415 #> 20 0.23176652 -0.65093796 0.110309109 -0.418312438 -0.16535564"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/prepare.html","id":null,"dir":"Reference","previous_headings":"","what":"Prepare Data for Plotting — prepare","title":"Prepare Data for Plotting — prepare","text":"Prepare Data Plotting","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/prepare.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Prepare Data for Plotting — prepare","text":"","code":"prepare( x, margin, ..., axes = c(1, 2), active = TRUE, sup = TRUE, principal = TRUE, highlight = NULL, col = NULL, bg = NULL, pch = NULL, cex = NULL, lty = NULL, lwd = NULL, alpha = FALSE )"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/prepare.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Prepare Data for Plotting — prepare","text":"x MultivariateAnalysis object. margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns. ... Currently used. axes length-two numeric vector giving dimensions plotted. active logical scalar: active observations plotted? sup logical scalar: supplementary observations plotted? principal logical scalar: principal coordinates returned? FALSE, standard coordinates returned. highlight vector specifying information highlighted. NULL (default), highlighting applied. single character string passed, must one \"observation\", \"mass\", \"sum\", \"contribution\" \"cos2\" (see augment()). unambiguous substring can given. col colors lines points. bg background color open plot symbols given pch = 21:25. pch vector plotting characters symbols. can either single character integer code one set graphics symbols. cex numerical vector giving amount plotting characters symbols scaled relative default. lty, lwd specification line type width.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/prepare.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Prepare Data for Plotting — prepare","text":"data.frame following columns: x Coordinates along x. y Coordinates along y. z Variable highlighted. label Label. col Color lines points. bg Background color. pch Symbol. cex Symbol size. lty Line type. lwd Line width.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/prepare.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Prepare Data for Plotting — prepare","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/prepare_legend.html","id":null,"dir":"Reference","previous_headings":"","what":"Build a Legend — prepare_legend","title":"Build a Legend — prepare_legend","text":"Build Legend","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/prepare_legend.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Build a Legend — prepare_legend","text":"","code":"prepare_legend(x, args, points = TRUE, lines = TRUE)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/prepare_legend.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Build a Legend — prepare_legend","text":"x data.frame returned prepare(). args list additional arguments passed graphics::legend(); names list used argument names. NULL, legend displayed. points logical scalar: legend points? lines logical scalar: legend lines?","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/prepare_legend.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Build a Legend — prepare_legend","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/reexports.html","id":null,"dir":"Reference","previous_headings":"","what":"Objects exported from other packages — reexports","title":"Objects exported from other packages — reexports","text":"objects imported packages. Follow links see documentation. arkhe bootstrap","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/screeplot.html","id":null,"dir":"Reference","previous_headings":"","what":"Scree Plot — screeplot","title":"Scree Plot — screeplot","text":"Plot eigenvalues (scree plot) variances histogram.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/screeplot.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Scree Plot — screeplot","text":"","code":"# S4 method for MultivariateAnalysis screeplot( x, ..., eigenvalues = FALSE, cumulative = FALSE, labels = TRUE, limit = 10, col = \"grey90\", border = \"grey10\", col.cumulative = \"red\", lty.cumulative = \"solid\", lwd.cumulative = 2 )"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/screeplot.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Scree Plot — screeplot","text":"x CA, MCA PCA object. ... Extra parameters passed graphics::barplot(). eigenvalues logical scalar: eigenvalues plotted instead variance/inertia? cumulative logical scalar: cumulative percentages variance plotted? labels logical scalar: text labels drawn top bars? limit integer specifying number top elements displayed. col, border character string specifying bars infilling border colors. col.cumulative specification line color. lty.cumulative specification line type. lwd.cumulative specification line width.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/screeplot.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Scree Plot — screeplot","text":"screeplot() called side-effects: results graphic displayed. Invisibly returns x.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/screeplot.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Scree Plot — screeplot","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/screeplot.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Scree Plot — screeplot","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE) #> 1 qualitative variable was removed: Species. ## Screeplot screeplot(X) screeplot(X, cumulative = TRUE)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/subset.html","id":null,"dir":"Reference","previous_headings":"","what":"Extract Parts of an Object — subset","title":"Extract Parts of an Object — subset","text":"Operators acting objects extract parts.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/subset.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Extract Parts of an Object — subset","text":"","code":"# S4 method for CA,ANY,missing [[(x, i) # S4 method for PCA,ANY,missing [[(x, i)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/subset.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Extract Parts of an Object — subset","text":"x object extract element(s) replace element(s). character string specifying elements extract. unambiguous substring can given (see details).","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/subset.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Extract Parts of an Object — subset","text":"list.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/subset.html","id":"details","dir":"Reference","previous_headings":"","what":"Details","title":"Extract Parts of an Object — subset","text":"\"data\", returns list following elements: data numeric matrix raw data. mean numeric vector giving variables means (PCA). sd numeric vector giving variables standard deviations (PCA). \"rows\", returns list following elements: coord numeric matrix rows/individuals coordinates. cos2 numeric matrix rows/individuals squared cosine. masses numeric vector giving rows masses/individual weights. sup logical vector specifying whether point supplementary observation . \"columns\", returns list following elements: coord numeric matrix columns/variables coordinates. cor numeric matrix correlation variables dimensions (PCA). cos2 numeric matrix columns/variables squared cosine. masses numeric vector giving columns masses/variable weights. sup logical vector specifying whether point supplementary observation . \"eigenvalues\", returns numeric vector eigenvalues.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/subset.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Extract Parts of an Object — subset","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/subset.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Extract Parts of an Object — subset","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE, sup_row = 8:10, sup_col = 1) #> 1 qualitative variable was removed: Species. ## Get results for the individuals X[[\"rows\"]] #> $coordinates #> F1 F2 #> 1 -2.1799607 0.107860619 #> 2 -1.6996139 -0.926588874 #> 3 -1.9288393 -0.527485410 #> 4 -1.7585967 -0.705022642 #> 5 -2.2760301 0.314750517 #> 6 -2.2841520 1.069266219 #> 7 -1.9994783 -0.054120776 #> 11 -2.3350128 0.536316749 #> 12 -2.0097181 -0.069676614 #> 13 -1.7840271 -0.971497378 #> 14 -1.8952870 -1.015526377 #> 15 -2.7344808 1.112957446 #> 16 -2.8386721 2.074363046 #> 17 -2.4324986 1.010560888 #> 18 -2.0955476 0.152769123 #> 19 -2.2724958 0.817467817 #> 20 -2.3466691 0.788115151 #> 21 -1.9726315 -0.055000281 #> 22 -2.1661866 0.626133757 #> 23 -2.4243767 0.256045186 #> 24 -1.6233228 -0.127164668 #> 25 -1.8984582 -0.025647615 #> 26 -1.6254407 -0.897236208 #> 27 -1.8408919 0.020140394 #> 28 -2.1428741 0.122536952 #> 29 -2.0838914 -0.099029280 #> 30 -1.8175794 -0.483456411 #> 31 -1.7215100 -0.690346310 #> 32 -1.8779785 0.005464061 #> 33 -2.8037034 1.318967839 #> 34 -2.8524463 1.556089908 #> 35 -1.7585967 -0.705022642 #> 36 -1.9659259 -0.542161743 #> 37 -2.2170474 0.093184286 #> 38 -2.3604432 0.269842013 #> 39 -1.7367006 -0.941265207 #> 40 -2.0468047 -0.084352947 #> 41 -2.1326343 0.138092790 #> 42 -0.9798020 -2.344585993 #> 43 -1.9288393 -0.527485410 #> 44 -1.7681350 0.316847300 #> 45 -2.1139094 0.891728987 #> 46 -1.6152008 -0.881680370 #> 47 -2.3939955 0.757882980 #> 48 -1.8917527 -0.512809077 #> 49 -2.3350128 0.536316749 #> 50 -1.9878220 -0.305919178 #> 51 0.3450638 0.510411957 #> 52 0.3553036 0.525967795 #> 53 0.5997195 0.377783228 #> 54 0.8656684 -1.499239964 #> 55 0.7766677 -0.286915466 #> 56 0.5707548 -0.391408807 #> 57 0.4178206 0.807118863 #> 58 0.2567533 -1.529809908 #> 59 0.5117721 -0.169842576 #> 60 0.5287175 -0.641448199 #> 61 0.7152040 -2.328016836 #> 62 0.4361824 0.068158999 #> 63 0.7084985 -1.840855375 #> 64 0.6332719 -0.110257739 #> 65 0.1409057 -0.316605905 #> 66 0.3298732 0.259493060 #> 67 0.5474423 0.112187998 #> 68 0.2652383 -0.791729549 #> 69 1.3159972 -1.542931190 #> 70 0.4676168 -1.189953508 #> 71 0.7198029 0.704722305 #> 72 0.3853216 -0.464790472 #> 73 1.1761357 -0.863556163 #> 74 0.5605150 -0.406964645 #> 75 0.4005122 -0.213871574 #> 76 0.4259426 0.052603161 #> 77 0.7664279 -0.302471304 #> 78 0.9017017 0.275386670 #> 79 0.6435117 -0.094701901 #> 80 0.1387878 -1.086677445 #> 81 0.5265996 -1.411519740 #> 82 0.4050998 -1.471104576 #> 83 0.3598912 -0.731265207 #> 84 1.1425834 -0.375515196 #> 85 0.5474423 0.112187998 #> 86 0.2475780 0.984656096 #> 87 0.5255462 0.348430562 #> 88 1.0140150 -1.440534633 #> 89 0.2302695 -0.036334342 #> 90 0.6735297 -1.085460167 #> 91 0.6413938 -0.864773441 #> 92 0.5001159 0.081955827 #> 93 0.4930472 -0.923478773 #> 94 0.3528226 -1.736699807 #> 95 0.5555643 -0.642327704 #> 96 0.1829431 -0.066566513 #> 97 0.3634255 -0.228547907 #> 98 0.4005122 -0.213871574 #> 99 0.1338371 -1.322040504 #> 100 0.4224083 -0.450114139 #> 101 1.6596649 1.402087727 #> 102 1.3958227 -0.240789684 #> 103 1.5731339 0.587107682 #> 104 1.3047041 0.201463273 #> 105 1.6204604 0.617339853 #> 106 1.8327404 0.689842013 #> 107 1.1966153 -0.832444487 #> 108 1.5643105 0.304197604 #> 109 1.7631548 -0.596743655 #> 110 1.4085435 2.037433755 #> 111 0.9998890 0.838568312 #> 112 1.4699960 -0.211437019 #> 113 1.4247874 0.528402351 #> 114 1.6352879 -0.624337311 #> 115 1.7218189 0.190642734 #> 116 1.3273016 1.002646490 #> 117 1.1715481 0.393676839 #> 118 1.1856853 2.404546038 #> 119 2.4971040 -0.003871575 #> 120 1.5014304 -1.469549526 #> 121 1.4756482 1.061351821 #> 122 1.3099931 -0.018343948 #> 123 1.9775527 0.245830045 #> 124 1.2372363 -0.315050854 #> 125 1.2107526 1.178424712 #> 126 1.1648425 0.880838301 #> 127 1.1040803 -0.122837289 #> 128 0.9490282 0.305618841 #> 129 1.6540127 0.129298887 #> 130 1.1139818 0.347888830 #> 131 1.6706197 0.112863543 #> 132 0.9055992 2.270700031 #> 133 1.7384258 0.174207390 #> 134 0.9621009 -0.213533802 #> 135 1.2552597 -0.598840438 #> 136 1.8161334 0.706277356 #> 137 1.3308359 1.505363789 #> 138 1.0754787 0.600566737 #> 139 0.9119416 0.290942508 #> 140 1.2916314 0.720615916 #> 141 1.6190440 0.884694094 #> 142 1.3491977 0.766403925 #> 143 1.3958227 -0.240789684 #> 144 1.5498214 1.090704487 #> 145 1.5484050 1.358058728 #> 146 1.4823537 0.574190360 #> 147 1.5508748 -0.669245814 #> 148 1.2291144 0.439464848 #> 149 1.1722495 1.431102620 #> 150 1.0232015 0.334971507 #> 8 -2.0468047 -0.084352947 #> 9 -1.6035446 -1.133478772 #> 10 -1.8430098 -0.749931146 #> #> $contributions #> F1 F2 #> 1 1.453343684 0.0106993487 #> 2 0.883428800 0.7895973615 #> 3 1.137792525 0.2558894786 #> 4 0.945809064 0.4571278240 #> 5 1.584261926 0.0911096611 #> 6 1.595588876 1.0514853344 #> 7 1.222656219 0.0026937641 #> 11 1.667437334 0.2645295822 #> 12 1.235211341 0.0044648369 #> 13 0.973360803 0.8679901399 #> 14 1.098552806 0.9484489111 #> 15 2.286760836 1.1391702764 #> 16 2.464344658 3.9573190026 #> 17 1.809573309 0.9391965689 #> 18 1.342969212 0.0214636064 #> 19 1.579345535 0.6145721192 #> 20 1.684126390 0.5712298316 #> 21 1.190043653 0.0027820270 #> 22 1.435035728 0.3605502185 #> 23 1.797509409 0.0602927030 #> 24 0.805899240 0.0148718312 #> 25 1.102232091 0.0006049584 #> 26 0.808003463 0.7403636858 #> 27 1.036400344 0.0003730503 #> 28 1.404314222 0.0138091094 #> 29 1.328070529 0.0090190079 #> 30 1.010317225 0.2149543180 #> 31 0.906337800 0.4382940161 #> 32 1.078579659 0.0000274576 #> 33 2.404003572 1.5999261560 #> 34 2.488318246 2.2269009410 #> 35 0.945809064 0.4571278240 #> 36 1.181966834 0.2703268996 #> 37 1.503214416 0.0079857717 #> 38 1.703954895 0.0669654302 #> 39 0.922403375 0.8148084750 #> 40 1.281220300 0.0065438305 #> 41 1.390925123 0.0175377362 #> 42 0.293594279 5.0554970160 #> 43 1.137792525 0.2558894786 #> 44 0.956096741 0.0923276004 #> 45 1.366607256 0.7313028984 #> 46 0.797855133 0.7149141115 #> 47 1.752740637 0.5282455348 #> 48 1.094459487 0.2418482414 #> 49 1.667437334 0.2645295822 #> 50 1.208442464 0.0860686388 #> 51 0.036414113 0.2395924925 #> 52 0.038607369 0.2544191706 #> 53 0.109993587 0.1312553072 #> 54 0.229178638 2.0671587361 #> 55 0.184476671 0.0757075942 #> 56 0.099625421 0.1408940695 #> 57 0.053388873 0.5991099343 #> 58 0.020160574 2.1523181354 #> 59 0.080098468 0.0265292309 #> 60 0.085490582 0.3784031185 #> 61 0.156433881 4.9842952461 #> 62 0.058184494 0.0042724593 #> 63 0.153514287 3.1165268007 #> 64 0.122645427 0.0111802030 #> 65 0.006071949 0.0921869714 #> 66 0.033278603 0.0619274246 #> 67 0.091653220 0.0115750885 #> 68 0.021515104 0.5764813136 #> 69 0.529640167 2.1893976274 #> 70 0.066873073 1.3022414468 #> 71 0.158452140 0.4567384375 #> 72 0.045406471 0.1986762522 #> 73 0.423044289 0.6858240370 #> 74 0.096082758 0.1523157768 #> 75 0.049057166 0.0420666239 #> 76 0.055484680 0.0025448091 #> 77 0.179644343 0.0841394918 #> 78 0.248654774 0.0697456870 #> 79 0.126643778 0.0082480050 #> 80 0.005890792 1.0860075196 #> 81 0.084807053 1.8323373666 #> 82 0.050187444 1.9903003497 #> 83 0.039610792 0.4917918728 #> 84 0.399251696 0.1296840484 #> 85 0.091653220 0.0115750885 #> 86 0.018745415 0.8916628530 #> 87 0.084468126 0.1116513580 #> 88 0.314455886 1.9084418605 #> 89 0.016216010 0.0012141326 #> 90 0.138734505 1.0835758275 #> 91 0.125811545 0.6877588893 #> 92 0.076491334 0.0061771934 #> 93 0.074344362 0.7843056805 #> 94 0.038070081 2.7738376469 #> 95 0.094392957 0.3794415052 #> 96 0.010235356 0.0040751457 #> 97 0.040392607 0.0480381224 #> 98 0.049057166 0.0420666239 #> 99 0.005478023 1.6073892100 #> 100 0.054567719 0.1863274482 #> 101 0.842387320 1.8079312085 #> 102 0.595842510 0.0533221045 #> 103 0.756837054 0.3170056865 #> 104 0.520589025 0.0373270182 #> 105 0.803059702 0.3504936509 #> 106 1.027242319 0.4376539041 #> 107 0.437905211 0.6372973156 #> 108 0.748370960 0.0851026540 #> 109 0.950718311 0.3274968644 #> 110 0.606752411 3.8176711884 #> 111 0.305755696 0.6467082790 #> 112 0.660850565 0.0411143642 #> 113 0.620827724 0.2567798899 #> 114 0.817823172 0.3584842707 #> 115 0.906663024 0.0334250480 #> 116 0.538778450 0.9245431850 #> 117 0.419750477 0.1425316314 #> 118 0.429941982 5.3173802664 #> 119 1.906971687 0.0000137850 #> 120 0.689416059 1.9860948268 #> 121 0.665942333 1.0359773621 #> 122 0.524818373 0.0003094690 #> 123 1.195988781 0.0555778122 #> 124 0.468140574 0.0912836189 #> 125 0.448313474 1.2771303006 #> 126 0.414959229 0.7135491729 #> 127 0.372796904 0.0138768844 #> 128 0.275441407 0.0858997255 #> 129 0.836659379 0.0153752114 #> 130 0.379513426 0.1113044416 #> 131 0.853544550 0.0117149082 #> 132 0.250808937 4.7418854471 #> 133 0.924236944 0.0279103111 #> 134 0.283081973 0.0419338551 #> 135 0.481879173 0.3298023644 #> 136 1.008710388 0.4587563529 #> 137 0.541651566 2.0840803395 #> 138 0.353732210 0.3317065721 #> 139 0.254334345 0.0778477176 #> 140 0.510209050 0.4775724073 #> 141 0.801656426 0.7198098450 #> 142 0.556701191 0.5401905310 #> 143 0.595842510 0.0533221045 #> 144 0.734571902 1.0940715530 #> 145 0.733229824 1.6961670731 #> 146 0.672008322 0.3032098599 #> 147 0.735570728 0.4119104916 #> 148 0.462014453 0.1776150699 #> 149 0.420253277 1.8835323329 #> 150 0.320179346 0.1031922926 #> #> $cos2 #> F1 F2 #> 1 0.997537883 2.442069e-03 #> 2 0.770275213 2.289389e-01 #> 3 0.929285621 6.949892e-02 #> 4 0.861533164 1.384668e-01 #> 5 0.981140144 1.876324e-02 #> 6 0.820250332 1.797497e-01 #> 7 0.997006440 7.304536e-04 #> 11 0.948921305 5.006041e-02 #> 12 0.997254638 1.198698e-03 #> 13 0.771015900 2.286355e-01 #> 14 0.775718588 2.227084e-01 #> 15 0.857879117 1.421129e-01 #> 16 0.651874030 3.480990e-01 #> 17 0.849498051 1.466163e-01 #> 18 0.993184069 5.278443e-03 #> 19 0.884472859 1.144510e-01 #> 20 0.898639841 1.013588e-01 #> 21 0.995527356 7.739112e-04 #> 22 0.920782450 7.693067e-02 #> 23 0.985634960 1.099383e-02 #> 24 0.983278582 6.033923e-03 #> 25 0.988580295 1.804280e-04 #> 26 0.766287189 2.334871e-01 #> 27 0.996619952 1.192913e-04 #> 28 0.996181238 3.257461e-03 #> 29 0.997744694 2.253183e-03 #> 30 0.933168940 6.602192e-02 #> 31 0.861052131 1.384664e-01 #> 32 0.993951874 8.414246e-06 #> 33 0.814686002 1.802995e-01 #> 34 0.769931500 2.291324e-01 #> 35 0.861533164 1.384668e-01 #> 36 0.926583440 7.047060e-02 #> 37 0.998037699 1.763122e-03 #> 38 0.984800233 1.287005e-02 #> 39 0.771150422 2.265235e-01 #> 40 0.997960094 1.694966e-03 #> 41 0.992507874 4.161436e-03 #> 42 0.146925900 8.413062e-01 #> 43 0.929285621 6.949892e-02 #> 44 0.946393484 3.039071e-02 #> 45 0.848161656 1.509286e-01 #> 46 0.765582021 2.281188e-01 #> 47 0.906464208 9.084652e-02 #> 48 0.931348538 6.843763e-02 #> 49 0.948921305 5.006041e-02 #> 50 0.976803096 2.313478e-02 #> 51 0.277995466 6.082479e-01 #> 52 0.311683132 6.830184e-01 #> 53 0.664146963 2.635440e-01 #> 54 0.249361414 7.479428e-01 #> 55 0.878241702 1.198537e-01 #> 56 0.637260992 2.996949e-01 #> 57 0.210729871 7.863598e-01 #> 58 0.027308118 9.694709e-01 #> 59 0.758623302 8.355378e-02 #> 60 0.387926000 5.709851e-01 #> 61 0.086194377 9.132535e-01 #> 62 0.926162213 2.261503e-02 #> 63 0.128022840 8.642691e-01 #> 64 0.898327863 2.723157e-02 #> 65 0.130964651 6.612032e-01 #> 66 0.593595505 3.673229e-01 #> 67 0.958380776 4.024891e-02 #> 68 0.090772461 8.087892e-01 #> 69 0.420435646 5.779399e-01 #> 70 0.133260226 8.629393e-01 #> 71 0.504882110 4.839482e-01 #> 72 0.406578554 5.915782e-01 #> 73 0.645293645 3.478754e-01 #> 74 0.519247169 2.737241e-01 #> 75 0.734870489 2.095489e-01 #> 76 0.958138539 1.461335e-02 #> 77 0.812191218 1.264981e-01 #> 78 0.912896321 8.514938e-02 #> 79 0.978657862 2.119510e-02 #> 80 0.016044824 9.836341e-01 #> 81 0.122144323 8.775790e-01 #> 82 0.070309187 9.272035e-01 #> 83 0.194938448 8.048312e-01 #> 84 0.891022209 9.624269e-02 #> 85 0.958380776 4.024891e-02 #> 86 0.059437245 9.401643e-01 #> 87 0.672034771 2.953945e-01 #> 88 0.330736771 6.674844e-01 #> 89 0.946744678 2.357189e-02 #> 90 0.277285564 7.201808e-01 #> 91 0.342463747 6.225436e-01 #> 92 0.891508689 2.394109e-02 #> 93 0.221487022 7.770072e-01 #> 94 0.039508517 9.572545e-01 #> 95 0.426831711 5.705601e-01 #> 96 0.490691231 6.496627e-02 #> 97 0.698527791 2.762532e-01 #> 98 0.734870489 2.095489e-01 #> 99 0.009680752 9.445952e-01 #> 100 0.467996371 5.314018e-01 #> 101 0.576108690 4.111629e-01 #> 102 0.961696898 2.861893e-02 #> 103 0.877177165 1.221776e-01 #> 104 0.958249977 2.284791e-02 #> 105 0.870879776 1.263950e-01 #> 106 0.851672810 1.206619e-01 #> 107 0.657810722 3.183482e-01 #> 108 0.886186912 3.351128e-02 #> 109 0.885499558 1.014339e-01 #> 110 0.321916434 6.735496e-01 #> 111 0.577480507 4.061726e-01 #> 112 0.978244776 2.023845e-02 #> 113 0.873487112 1.201395e-01 #> 114 0.848034409 1.236129e-01 #> 115 0.885718143 1.085828e-02 #> 116 0.607788840 3.468240e-01 #> 117 0.884632536 9.989009e-02 #> 118 0.191705611 7.884282e-01 #> 119 0.992440547 2.385649e-06 #> 120 0.508966080 4.875811e-01 #> 121 0.651305390 3.369285e-01 #> 122 0.949464886 1.861772e-04 #> 123 0.939398567 1.451656e-02 #> 124 0.929464957 6.026831e-02 #> 125 0.513528277 4.864713e-01 #> 126 0.594651369 3.400324e-01 #> 127 0.968111697 1.198353e-02 #> 128 0.898455967 9.317487e-02 #> 129 0.989867285 6.049073e-03 #> 130 0.787377903 7.679059e-02 #> 131 0.967682818 4.416571e-03 #> 132 0.132869218 8.353566e-01 #> 133 0.977445867 9.815525e-03 #> 134 0.899008289 4.428491e-02 #> 135 0.716813201 1.631402e-01 #> 136 0.867820065 1.312456e-01 #> 137 0.428750425 5.485781e-01 #> 138 0.748409494 2.333771e-01 #> 139 0.890507966 9.063963e-02 #> 140 0.754859896 2.349616e-01 #> 141 0.744129523 2.221864e-01 #> 142 0.695525700 2.244282e-01 #> 143 0.961696898 2.861893e-02 #> 144 0.666268263 3.299894e-01 #> 145 0.547542725 4.211977e-01 #> 146 0.810397292 1.215923e-01 #> 147 0.830568366 1.546654e-01 #> 148 0.874671814 1.118173e-01 #> 149 0.391519529 5.835188e-01 #> 150 0.903130625 9.679300e-02 #> 8 0.997960094 1.694966e-03 #> 9 0.666045138 3.327885e-01 #> 10 0.856123843 1.417503e-01 #> #> $masses #> 1 2 3 4 5 6 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 7 14 15 16 17 18 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 19 20 21 22 23 24 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 25 26 27 28 29 30 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 31 32 33 34 35 36 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 37 38 39 40 41 42 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 43 44 45 46 47 48 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 49 50 51 52 53 54 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 55 56 57 58 59 60 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 61 62 63 64 65 66 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 67 68 69 70 71 72 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 73 74 75 76 77 78 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 79 80 81 82 83 84 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 85 86 87 88 89 90 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 91 92 93 94 95 96 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 97 98 99 100 101 102 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 103 104 105 106 107 108 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 109 110 111 112 113 114 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 115 116 117 118 119 120 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 121 122 123 124 125 126 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 127 128 129 130 131 132 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 133 134 135 136 137 138 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 139 140 141 142 143 144 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 145 146 147 148 149 150 #> 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 0.006802721 #> 8 9 10 #> 0.006802721 0.006802721 0.006802721 #> #> $supplement #> [1] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [13] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [25] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [37] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [49] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [61] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [73] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [85] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [97] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [109] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [121] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [133] FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE FALSE #> [145] FALSE FALSE FALSE TRUE TRUE TRUE #>"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/summary.html","id":null,"dir":"Reference","previous_headings":"","what":"Object Summaries — summary","title":"Object Summaries — summary","text":"Provides summary results multivariate data analysis.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/summary.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Object Summaries — summary","text":"","code":"# S4 method for CA summary(object, margin = 1, active = TRUE, sup = TRUE, rank = 3) # S4 method for PCA summary(object, margin = 1, active = TRUE, sup = TRUE, rank = 3)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/summary.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Object Summaries — summary","text":"object CA, MCA PCA object. margin length-one numeric vector giving subscript data summarized: 1 indicates individuals/rows (default), 2 indicates variables/columns. active logical scalar: active observations summarized? sup logical scalar: supplementary observations summarized? rank integer value specifying maximal number components kept results.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/summary.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Object Summaries — summary","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/summary.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Object Summaries — summary","text":"","code":"## Data from Lebart et al. 2006, p. 170-172 data(\"colours\") ## Compute correspondence analysis X <- ca(colours) ## Rows summary summary(X, margin = 1) #> --- Correspondence Analysis (CA) ------------------------------------------------ #> #> Eigenvalues: #> eigenvalues variance cumulative #> F1 0.209 89.373 89.373 #> F2 0.022 9.515 98.888 #> F3 0.003 1.112 100.000 #> #> Active rows: #> inertia CA1_coord CA1_contrib CA1_cos2 CA2_coord CA2_contrib CA2_cos2 #> marron 93.086 -0.492 43.116 0.967 -0.088 13.042 0.031 #> noisette 13.089 -0.213 3.401 0.542 0.167 19.804 0.336 #> vert 16.085 0.162 1.355 0.176 0.339 55.910 0.773 #> bleu 111.337 0.547 52.128 0.977 -0.083 11.244 0.022 #> CA3_coord CA3_contrib CA3_cos2 #> marron 0.022 6.680 0.002 #> noisette -0.101 61.086 0.121 #> vert 0.088 31.925 0.052 #> bleu -0.005 0.310 0.000 ## Columns summary summary(X, margin = 2) #> --- Correspondence Analysis (CA) ------------------------------------------------ #> #> Eigenvalues: #> eigenvalues variance cumulative #> F1 0.209 89.373 89.373 #> F2 0.022 9.515 98.888 #> F3 0.003 1.112 100.000 #> #> Active columns: #> inertia CA1_coord CA1_contrib CA1_cos2 CA2_coord CA2_contrib CA2_cos2 #> brun 55.425 -0.505 22.246 0.838 -0.215 37.877 0.152 #> chatain 12.284 -0.148 5.086 0.864 0.033 2.319 0.042 #> roux 15.095 -0.130 0.964 0.133 0.320 55.131 0.812 #> blond 150.793 0.835 71.704 0.993 -0.070 4.673 0.007 #> CA3_coord CA3_contrib CA3_cos2 #> brun 0.056 21.633 0.010 #> chatain -0.049 44.284 0.094 #> roux 0.083 31.913 0.055 #> blond 0.016 2.171 0.000"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/svd2.html","id":null,"dir":"Reference","previous_headings":"","what":"Singular Value Decomposition of a Matrix — svd2","title":"Singular Value Decomposition of a Matrix — svd2","text":"Singular Value Decomposition Matrix","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/svd2.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Singular Value Decomposition of a Matrix — svd2","text":"","code":"svd2(x, rank = Inf)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/svd2.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Singular Value Decomposition of a Matrix — svd2","text":"x \\(m \\times p\\) numeric matrix. rank integer value specifying maximal number components kept results.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/svd2.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Singular Value Decomposition of a Matrix — svd2","text":"list following elements: d vector containing singular values x, length rank, sorted decreasingly. u matrix whose columns contain left singular vectors x. Dimension c(m, rank). v matrix whose columns contain right singular vectors x. Dimension c(p, rank).","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/svd2.html","id":"note","dir":"Reference","previous_headings":"","what":"Note","title":"Singular Value Decomposition of a Matrix — svd2","text":"PCA PCA-cor whitening sign-ambiguity eigenvector matrices. order resolve sign-ambiguity use eigenvector matrices positive diagonal. effect make cross-correlations cross-correlations positive diagonal PCA.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/tidy.html","id":null,"dir":"Reference","previous_headings":"","what":"Tidy Coordinates — tidy","title":"Tidy Coordinates — tidy","text":"Tidy Coordinates","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/tidy.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Tidy Coordinates — tidy","text":"","code":"tidy(x, ...) augment(x, ...) # S4 method for MultivariateAnalysis augment(x, ..., margin = 1, axes = c(1, 2), principal = TRUE) # S4 method for MultivariateAnalysis tidy(x, ..., margin = 1, principal = TRUE)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/tidy.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Tidy Coordinates — tidy","text":"x CA, MCA PCA object. ... Currently used. margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns. axes length-two numeric vector giving dimensions compute results. principal logical scalar: principal coordinates returned? FALSE, standard coordinates returned.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/tidy.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Tidy Coordinates — tidy","text":"tidy() returns long data.frame following columns: label Row/column names original data. component Component. supplementary Whether observation active supplementary. coordinate Coordinates. contribution Contributions definition components. cos2 \\(cos^2\\). augment() returns wide data.frame row/column coordinates along axes following columns: label Row/column names original data. supplementary Whether observation active supplementary. mass Weight/mass observation. sum Sum squared coordinates along axes. contribution Joint contributions definition axes. cos2 Joint \\(cos^2\\) along axes.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/tidy.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Tidy Coordinates — tidy","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/tidy.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Tidy Coordinates — tidy","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE, sup_row = 5:10) #> 1 qualitative variable was removed: Species. ## Get row principal coordinates head(get_coordinates(X, margin = 1, principal = TRUE)) #> F1 F2 F3 .sup #> 1 -2.385846 0.5084067 -0.12383101 FALSE #> 2 -2.215654 -0.6515155 -0.23313750 FALSE #> 3 -2.496566 -0.3169280 0.04974232 FALSE #> 4 -2.433607 -0.5744432 0.09690301 FALSE #> 11 -2.279483 1.0742447 -0.26629760 FALSE #> 12 -2.450871 0.1591839 0.09988982 FALSE ## Get row standard coordinates head(get_coordinates(X, margin = 1, principal = FALSE)) #> F1 F2 F3 .sup #> 1 -1.403075 0.5268995 -0.3142569 FALSE #> 2 -1.302987 -0.6752138 -0.5916536 FALSE #> 3 -1.468187 -0.3284560 0.1262355 FALSE #> 4 -1.431162 -0.5953380 0.2459193 FALSE #> 11 -1.340525 1.1133193 -0.6758069 FALSE #> 12 -1.441315 0.1649741 0.2534992 FALSE ## Tidy principal coordinates head(tidy(X, margin = 1)) #> label component supplementary coordinate contribution cos2 #> 1 1 F1 FALSE -2.3858463 1.36709655 0.954033073 #> 2 1 F2 FALSE 0.5084067 0.19279380 0.043321256 #> 3 1 F3 FALSE -0.1238310 0.06858151 0.002570025 #> 4 10 F1 TRUE -2.3173283 NA 0.953213276 #> 5 10 F2 TRUE -0.4448514 NA 0.035127301 #> 6 10 F3 TRUE -0.2525218 NA 0.011319124 head(tidy(X, margin = 2)) #> label component supplementary coordinate contribution cos2 #> 1 Petal.Length F1 FALSE 0.99121597 33.97921607 0.9825091061 #> 2 Petal.Length F2 FALSE 0.01655680 0.02944324 0.0002741275 #> 3 Petal.Length F3 FALSE 0.05477927 1.93260521 0.0030007681 #> 4 Petal.Width F1 FALSE 0.96350955 32.10619376 0.9283506618 #> 5 Petal.Width F2 FALSE 0.05756108 0.35586957 0.0033132775 #> 6 Petal.Width F3 FALSE 0.24948796 40.08758618 0.0622442430 head(augment(X, margin = 1, axes = c(1, 2))) #> F1 F2 label supplementary mass sum contribution #> 1 -2.385846 0.5084067 1 FALSE 0.006944444 5.950740 4.132458 #> 2 -2.215654 -0.6515155 2 FALSE 0.006944444 5.333593 3.703884 #> 3 -2.496566 -0.3169280 3 FALSE 0.006944444 6.333284 4.398114 #> 4 -2.433607 -0.5744432 4 FALSE 0.006944444 6.252426 4.341962 #> 5 -2.279483 1.0742447 11 FALSE 0.006944444 6.350046 4.409754 #> 6 -2.450871 0.1591839 12 FALSE 0.006944444 6.032107 4.188963 #> cos2 #> 1 0.9973543 #> 2 0.9880287 #> 3 0.9995093 #> 4 0.9977072 #> 5 0.9889258 #> 6 0.9951651 head(augment(X, margin = 2, axes = c(1, 2))) #> F1 F2 label supplementary mass sum contribution #> 1 0.8875399 0.36087785 Sepal.Length FALSE 1 0.9179599 91.79599 #> 2 -0.4392190 0.89286998 Sepal.Width FALSE 1 0.9901302 99.01302 #> 3 0.9912160 0.01655680 Petal.Length FALSE 1 0.9827832 98.27832 #> 4 0.9635096 0.05756108 Petal.Width FALSE 1 0.9316639 93.16639 #> cos2 #> 1 0.9179599 #> 2 0.9901302 #> 3 0.9827832 #> 4 0.9316639"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_biplot.html","id":null,"dir":"Reference","previous_headings":"","what":"Build a Biplot — viz_biplot","title":"Build a Biplot — viz_biplot","text":"Build Biplot","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_biplot.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Build a Biplot — viz_biplot","text":"","code":"viz_biplot( coord_row, coord_col, ..., rows = TRUE, columns = TRUE, labels = c(\"rows\", \"columns\", \"individuals\", \"variables\"), xlim = NULL, ylim = NULL, main = NULL, sub = NULL, xlab = NULL, ylab = NULL, axes = TRUE, frame.plot = axes, ann = graphics::par(\"ann\"), panel.first = NULL, panel.last = NULL, legend = list(x = \"topleft\") )"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_biplot.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Build a Biplot — viz_biplot","text":"coord_row data.frame returned prepare(). coord_col data.frame returned prepare(). columns logical scalar: columns drawn? labels character vector specifying whether \"rows\"/\"individuals\" /\"columns\"/\"variables\" names must drawn. unambiguous substring can given. xlim length-two numeric vector giving x limits plot. default value, NULL, indicates range finite values plotted used. ylim length-two numeric vector giving y limits plot. default value, NULL, indicates range finite values plotted used. main character string giving main title plot. sub character string giving subtitle plot. xlab, ylab character vector giving x y axis labels. axes logical scalar: axes drawn plot? frame.plot logical scalar: box drawn around plot? ann logical scalar: default annotation (title x y axis labels) appear plot? panel.first expression evaluated plot axes set plotting takes place. can useful drawing background grids. panel.last expression evaluated plotting taken place axes, title box added. legend list additional arguments passed graphics::legend(); names list used argument names. NULL, legend displayed. row logical scalar: rows drawn?","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_biplot.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Build a Biplot — viz_biplot","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_contributions.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Contributions and cos2 — viz_contributions","title":"Visualize Contributions and cos2 — viz_contributions","text":"Plots contributions histogram \\(cos^2\\) scatterplot.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_contributions.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Contributions and cos2 — viz_contributions","text":"","code":"viz_contributions(x, ...) viz_cos2(x, ...) # S4 method for MultivariateAnalysis viz_contributions( x, ..., margin = 2, axes = 1, sort = TRUE, decreasing = TRUE, limit = 10, horiz = FALSE, col = \"grey90\", border = \"grey10\" ) # S4 method for MultivariateAnalysis viz_cos2( x, ..., margin = 2, axes = c(1, 2), active = TRUE, sup = TRUE, sort = TRUE, decreasing = TRUE, limit = 10, horiz = FALSE, col = \"grey90\", border = \"grey10\" )"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_contributions.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Contributions and cos2 — viz_contributions","text":"x CA, MCA PCA object. ... Extra parameters passed graphics::barplot(). margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns. axes numeric vector giving dimensions plotted. sort logical scalar: data sorted? decreasing logical scalar: sort order decreasing? used sort TRUE. limit integer specifying number top elements displayed. horiz logical scalar: bars drawn horizontally first bottom? col, border character string specifying bars infilling border colors. active logical scalar: active observations plotted? sup logical scalar: supplementary observations plotted?","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_contributions.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Contributions and cos2 — viz_contributions","text":"viz_contributions() viz_cos2() called side-effects: result graphic displayed. Invisibly return x.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_contributions.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Visualize Contributions and cos2 — viz_contributions","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_contributions.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Contributions and cos2 — viz_contributions","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE) #> 1 qualitative variable was removed: Species. ## Get row contributions head(get_contributions(X, margin = 1)) #> F1 F2 F3 #> 1 1.1715796 0.16806554 0.074085470 #> 2 0.9891845 0.33146674 0.250034006 #> 3 1.2768164 0.08526419 0.008875320 #> 4 1.2077372 0.26029781 0.037858004 #> 5 1.3046313 0.30516562 0.001125175 #> 6 0.9841236 1.61748779 0.003303827 ## Plot contributions viz_contributions(X) ## Plot cos2 viz_cos2(X)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_individuals.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Individuals Factor Map — viz_individuals","title":"Visualize Individuals Factor Map — viz_individuals","text":"Plots row/individual principal coordinates.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_individuals.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Individuals Factor Map — viz_individuals","text":"","code":"viz_individuals(x, ...) viz_rows(x, ...) # S4 method for MultivariateAnalysis viz_rows( x, ..., axes = c(1, 2), active = TRUE, sup = TRUE, labels = FALSE, highlight = NULL, xlim = NULL, ylim = NULL, main = NULL, sub = NULL, panel.first = NULL, panel.last = NULL, legend = list(x = \"topleft\") ) # S4 method for BootstrapCA viz_rows(x, ..., axes = c(1, 2)) # S4 method for PCA viz_individuals( x, ..., axes = c(1, 2), active = TRUE, sup = TRUE, labels = FALSE, highlight = NULL, xlim = NULL, ylim = NULL, main = NULL, sub = NULL, panel.first = NULL, panel.last = NULL, legend = list(x = \"topleft\") )"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_individuals.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Individuals Factor Map — viz_individuals","text":"x CA, MCA PCA object. ... graphical parameters (see details). axes length-two numeric vector giving dimensions plotted. active logical scalar: active observations plotted? sup logical scalar: supplementary observations plotted? labels logical scalar: labels drawn? highlight vector specifying information highlighted. NULL (default), highlighting applied. single character string passed, must one \"observation\", \"mass\", \"sum\", \"contribution\" \"cos2\" (see augment()). unambiguous substring can given. xlim length-two numeric vector giving x limits plot. default value, NULL, indicates range finite values plotted used. ylim length-two numeric vector giving y limits plot. default value, NULL, indicates range finite values plotted used. main character string giving main title plot. sub character string giving subtitle plot. panel.first expression evaluated plot axes set plotting takes place. can useful drawing background grids. panel.last expression evaluated plotting taken place axes, title box added. legend list additional arguments passed graphics::legend(); names list used argument names. NULL, legend displayed.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_individuals.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Individuals Factor Map — viz_individuals","text":"viz_*() called side-effects: results graphic displayed. Invisibly returns x.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_individuals.html","id":"details","dir":"Reference","previous_headings":"","what":"Details","title":"Visualize Individuals Factor Map — viz_individuals","text":"Commonly used graphical parameters : pch vector plotting characters symbols. can either single character integer code one set graphics symbols. cex numerical vector giving amount plotting characters symbols scaled relative default. col colors lines points. Multiple colors can specified point can given color. bg background color open plot symbols given pch = 21:25.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_individuals.html","id":"note","dir":"Reference","previous_headings":"","what":"Note","title":"Visualize Individuals Factor Map — viz_individuals","text":"careful: graphical parameters silently recycled.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_individuals.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Visualize Individuals Factor Map — viz_individuals","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_individuals.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Individuals Factor Map — viz_individuals","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE) #> 1 qualitative variable was removed: Species. ## Plot individuals viz_individuals(X, panel.last = graphics::grid()) ## Plot variables viz_variables(X, panel.last = graphics::grid()) ## Graphical parameters ## Continuous values viz_individuals(X, highlight = iris$Petal.Length, pch = 16) viz_individuals(X, highlight = iris$Petal.Length, pch = 16, col = grDevices::hcl.colors(12, \"RdPu\")) viz_individuals(X, highlight = iris$Petal.Length, pch = 16, col = grDevices::hcl.colors(12, \"RdPu\"), cex = c(1, 2)) viz_variables(X, highlight = \"contribution\", col = grDevices::hcl.colors(12, \"BluGrn\", rev = TRUE), lwd = c(1, 5)) ## Discrete values viz_individuals(X, highlight = iris$Species, pch = 21:23) viz_individuals(X, highlight = iris$Species, pch = 21:23, bg = c(\"#004488\", \"#DDAA33\", \"#BB5566\"), col = \"black\") viz_variables(X, highlight = c(\"Petal\", \"Petal\", \"Sepal\", \"Sepal\"), col = c(\"#EE7733\", \"#0077BB\"), lty = c(1, 3))"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_points.html","id":null,"dir":"Reference","previous_headings":"","what":"Build a Factor Map — viz_points","title":"Build a Factor Map — viz_points","text":"Build Factor Map","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_points.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Build a Factor Map — viz_points","text":"","code":"viz_points( x, margin, axes, ..., active = TRUE, sup = TRUE, labels = FALSE, highlight = NULL, xlim = NULL, ylim = NULL, main = NULL, sub = NULL, xlab = NULL, ylab = NULL, ann = graphics::par(\"ann\"), frame.plot = TRUE, panel.first = NULL, panel.last = NULL, legend = list(x = \"topleft\") )"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_points.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Build a Factor Map — viz_points","text":"x CA, MCA PCA object. margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns. axes length-two numeric vector giving dimensions plotted. ... graphical parameters (see details). active logical scalar: active observations plotted? sup logical scalar: supplementary observations plotted? labels logical scalar: labels drawn? highlight vector specifying information highlighted. NULL (default), highlighting applied. single character string passed, must one \"observation\", \"mass\", \"sum\", \"contribution\" \"cos2\" (see augment()). unambiguous substring can given. xlim length-two numeric vector giving x limits plot. default value, NULL, indicates range finite values plotted used. ylim length-two numeric vector giving y limits plot. default value, NULL, indicates range finite values plotted used. main character string giving main title plot. sub character string giving subtitle plot. xlab, ylab character vector giving x y axis labels. ann logical scalar: default annotation (title x y axis labels) appear plot? frame.plot logical scalar: box drawn around plot? panel.first expression evaluated plot axes set plotting takes place. can useful drawing background grids. panel.last expression evaluated plotting taken place axes, title box added. legend list additional arguments passed graphics::legend(); names list used argument names. NULL, legend displayed.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_points.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Build a Factor Map — viz_points","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_variables.html","id":null,"dir":"Reference","previous_headings":"","what":"Visualize Variables Factor Map — viz_variables","title":"Visualize Variables Factor Map — viz_variables","text":"Plots column/variable principal coordinates.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_variables.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Visualize Variables Factor Map — viz_variables","text":"","code":"viz_variables(x, ...) viz_columns(x, ...) # S4 method for MultivariateAnalysis viz_columns( x, ..., axes = c(1, 2), active = TRUE, sup = TRUE, labels = FALSE, highlight = NULL, xlim = NULL, ylim = NULL, main = NULL, sub = NULL, panel.first = NULL, panel.last = NULL, legend = list(x = \"topleft\") ) # S4 method for BootstrapCA viz_columns(x, ..., axes = c(1, 2)) # S4 method for PCA viz_variables( x, ..., axes = c(1, 2), active = TRUE, sup = TRUE, labels = TRUE, highlight = NULL, xlim = NULL, ylim = NULL, main = NULL, sub = NULL, panel.first = NULL, panel.last = NULL, legend = list(x = \"topleft\") ) # S4 method for CA viz_variables( x, ..., axes = c(1, 2), active = TRUE, sup = TRUE, labels = FALSE, highlight = NULL, xlim = NULL, ylim = NULL, main = NULL, sub = NULL, panel.first = NULL, panel.last = NULL, legend = list(x = \"topleft\") ) # S4 method for BootstrapPCA viz_variables(x, ..., axes = c(1, 2))"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_variables.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Visualize Variables Factor Map — viz_variables","text":"x CA, MCA PCA object. ... graphical parameters (see details). axes length-two numeric vector giving dimensions plotted. active logical scalar: active observations plotted? sup logical scalar: supplementary observations plotted? labels logical scalar: labels drawn? highlight vector specifying information highlighted. NULL (default), highlighting applied. single character string passed, must one \"observation\", \"mass\", \"sum\", \"contribution\" \"cos2\" (see augment()). unambiguous substring can given. xlim length-two numeric vector giving x limits plot. default value, NULL, indicates range finite values plotted used. ylim length-two numeric vector giving y limits plot. default value, NULL, indicates range finite values plotted used. main character string giving main title plot. sub character string giving subtitle plot. panel.first expression evaluated plot axes set plotting takes place. can useful drawing background grids. panel.last expression evaluated plotting taken place axes, title box added. legend list additional arguments passed graphics::legend(); names list used argument names. NULL, legend displayed.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_variables.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Visualize Variables Factor Map — viz_variables","text":"viz_*() called side-effects: results graphic displayed. Invisibly returns x.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_variables.html","id":"details","dir":"Reference","previous_headings":"","what":"Details","title":"Visualize Variables Factor Map — viz_variables","text":"Commonly used graphical parameters : pch vector plotting characters symbols. can either single character integer code one set graphics symbols. cex numerical vector giving amount plotting characters symbols scaled relative default. lty vector line types. lwd vector line widths. col colors lines points. Multiple colors can specified point can given color. bg background color open plot symbols given pch = 21:25.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_variables.html","id":"note","dir":"Reference","previous_headings":"","what":"Note","title":"Visualize Variables Factor Map — viz_variables","text":"careful: graphical parameters silently recycled.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_variables.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Visualize Variables Factor Map — viz_variables","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_variables.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Visualize Variables Factor Map — viz_variables","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE) #> 1 qualitative variable was removed: Species. ## Plot individuals viz_individuals(X, panel.last = graphics::grid()) ## Plot variables viz_variables(X, panel.last = graphics::grid()) ## Graphical parameters ## Continuous values viz_individuals(X, highlight = iris$Petal.Length, pch = 16) viz_individuals(X, highlight = iris$Petal.Length, pch = 16, col = grDevices::hcl.colors(12, \"RdPu\")) viz_individuals(X, highlight = iris$Petal.Length, pch = 16, col = grDevices::hcl.colors(12, \"RdPu\"), cex = c(1, 2)) viz_variables(X, highlight = \"contribution\", col = grDevices::hcl.colors(12, \"BluGrn\", rev = TRUE), lwd = c(1, 5)) ## Discrete values viz_individuals(X, highlight = iris$Species, pch = 21:23) viz_individuals(X, highlight = iris$Species, pch = 21:23, bg = c(\"#004488\", \"#DDAA33\", \"#BB5566\"), col = \"black\") viz_variables(X, highlight = c(\"Petal\", \"Petal\", \"Sepal\", \"Sepal\"), col = c(\"#EE7733\", \"#0077BB\"), lty = c(1, 3))"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_wrap.html","id":null,"dir":"Reference","previous_headings":"","what":"Plot Envelopes — viz_wrap","title":"Plot Envelopes — viz_wrap","text":"Plot Envelopes","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_wrap.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Plot Envelopes — viz_wrap","text":"","code":"viz_hull(x, ...) viz_confidence(x, ...) viz_tolerance(x, ...) # S4 method for MultivariateAnalysis viz_tolerance(x, ..., margin = 1, axes = c(1, 2), group = NULL, level = 0.95) # S4 method for BootstrapCA viz_tolerance(x, ..., margin = 1, axes = c(1, 2), level = 0.95) # S4 method for MultivariateAnalysis viz_confidence(x, ..., margin = 1, axes = c(1, 2), group = NULL, level = 0.95) # S4 method for BootstrapCA viz_confidence(x, ..., margin = 1, axes = c(1, 2), level = 0.95) # S4 method for MultivariateAnalysis viz_hull(x, ..., margin = 1, axes = c(1, 2), group = NULL) # S4 method for BootstrapCA viz_hull(x, ..., margin = 1, axes = c(1, 2))"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_wrap.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Plot Envelopes — viz_wrap","text":"x object wrap observations (CA, MCA PCA object). ... graphical parameters passed graphics::polygon(). margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns. axes length-two numeric vector giving dimensions compute results. group vector specifying group observation belongs . level numeric vector specifying confidence/tolerance level.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_wrap.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Plot Envelopes — viz_wrap","text":"viz_*()called side-effects: results graphic displayed. Invisibly returns x.","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_wrap.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Plot Envelopes — viz_wrap","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/viz_wrap.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Plot Envelopes — viz_wrap","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE) #> 1 qualitative variable was removed: Species. ## Convex hull coordinates hulls <- wrap_hull(X, margin = 1, group = iris$Species) ## Confidence ellipse coordinates conf <- wrap_confidence(X, margin = 1, group = iris$Species, level = c(0.68, 0.95)) ## Tolerance ellipse coordinates conf <- wrap_confidence(X, margin = 1, group = iris$Species, level = 0.95) ## Plot with convex hulls col <- c(\"#004488\", \"#DDAA33\", \"#BB5566\") viz_rows(X, highlight = iris$Species, col = col) viz_hull(X, group = iris$Species, border = col)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/wrap.html","id":null,"dir":"Reference","previous_headings":"","what":"Wrap Observations — wrap","title":"Wrap Observations — wrap","text":"wrap_hull() computes convex hull set observations. wrap_confidence() computes confidence ellipse. wrap_tolerance() computes tolerance ellipse.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/wrap.html","id":"ref-usage","dir":"Reference","previous_headings":"","what":"Usage","title":"Wrap Observations — wrap","text":"","code":"wrap_hull(x, ...) wrap_confidence(x, ...) wrap_tolerance(x, ...) # S4 method for MultivariateAnalysis wrap_confidence(x, margin = 1, axes = c(1, 2), group = NULL, level = 0.95) # S4 method for MultivariateAnalysis wrap_tolerance(x, margin = 1, axes = c(1, 2), group = NULL, level = 0.95) # S4 method for MultivariateAnalysis wrap_hull(x, margin = 1, axes = c(1, 2), group = NULL)"},{"path":"https://packages.tesselle.org/dimensio/dev/reference/wrap.html","id":"arguments","dir":"Reference","previous_headings":"","what":"Arguments","title":"Wrap Observations — wrap","text":"x object wrap observations (CA, MCA PCA object). ... Currently used. margin length-one numeric vector giving subscript data returned: 1 indicates individuals/rows (default), 2 indicates variables/columns. axes length-two numeric vector giving dimensions compute results. group vector specifying group observation belongs . level numeric vector specifying confidence/tolerance level.","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/wrap.html","id":"value","dir":"Reference","previous_headings":"","what":"Value","title":"Wrap Observations — wrap","text":"wrap_*() returns data.frame envelope x y coordinates. extra column named group added specifying group observation belongs .","code":""},{"path":[]},{"path":"https://packages.tesselle.org/dimensio/dev/reference/wrap.html","id":"author","dir":"Reference","previous_headings":"","what":"Author","title":"Wrap Observations — wrap","text":"N. Frerebeau","code":""},{"path":"https://packages.tesselle.org/dimensio/dev/reference/wrap.html","id":"ref-examples","dir":"Reference","previous_headings":"","what":"Examples","title":"Wrap Observations — wrap","text":"","code":"## Load data data(\"iris\") ## Compute principal components analysis X <- pca(iris, scale = TRUE) #> 1 qualitative variable was removed: Species. ## Convex hull coordinates hulls <- wrap_hull(X, margin = 1, group = iris$Species) ## Confidence ellipse coordinates conf <- wrap_confidence(X, margin = 1, group = iris$Species, level = c(0.68, 0.95)) ## Tolerance ellipse coordinates conf <- wrap_confidence(X, margin = 1, group = iris$Species, level = 0.95) ## Plot with convex hulls col <- c(\"#004488\", \"#DDAA33\", \"#BB5566\") viz_rows(X, highlight = iris$Species, col = col) viz_hull(X, group = iris$Species, border = col)"}] diff --git a/dimensio/dev/sitemap.xml b/dimensio/dev/sitemap.xml deleted file mode 100644 index 3d6313f93..000000000 --- a/dimensio/dev/sitemap.xml +++ /dev/null @@ -1,165 +0,0 @@ - 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+ Multivariate Data Analysis • dimensio @@ -20,27 +20,26 @@ - - + + - + - - - + + + Skip to contents @@ -50,7 +49,7 @@ dimensio - 0.4.1 + 0.5.0