From d1ff60fa39b994ece8f987473ee37ba9f97538d7 Mon Sep 17 00:00:00 2001 From: Shing Zhan Date: Mon, 26 Feb 2024 21:10:34 +0000 Subject: [PATCH] Fix bug --- python/tests/beagle_numba.py | 8 ++++---- 1 file changed, 4 insertions(+), 4 deletions(-) diff --git a/python/tests/beagle_numba.py b/python/tests/beagle_numba.py index 7ef0e4cc13..5607d1062c 100644 --- a/python/tests/beagle_numba.py +++ b/python/tests/beagle_numba.py @@ -566,8 +566,8 @@ def run_interpolation_beagle( typed_pos = pos[typed_idx] untyped_pos = pos[untyped_idx] # Get genetic map positions of markers. - typed_cm = convert_to_genetic_map_positions(typed_pos, genetic_map) - untyped_cm = convert_to_genetic_map_positions(untyped_pos, genetic_map) + typed_cm = convert_to_genetic_map_positions(typed_pos, genetic_map=genetic_map) + untyped_cm = convert_to_genetic_map_positions(untyped_pos, genetic_map=genetic_map) # Subset haplotypes. ref_h_typed = ref_h[typed_idx, :] ref_h_untyped = ref_h[untyped_idx, :] @@ -644,8 +644,8 @@ def run_tsimpute( typed_pos = pos[typed_idx] untyped_pos = pos[untyped_idx] # Get genetic map positions of markers. - typed_cm = convert_to_genetic_map_positions(typed_pos, genetic_map) - untyped_cm = convert_to_genetic_map_positions(untyped_pos, genetic_map) + typed_cm = convert_to_genetic_map_positions(typed_pos, genetic_map=genetic_map) + untyped_cm = convert_to_genetic_map_positions(untyped_pos, genetic_map=genetic_map) # Get rates at genotyped markers. transition_probs = tp[typed_idx] mismatch_probs = mp[typed_idx]