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NAMESPACE
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NAMESPACE
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# Generated by roxygen2: do not edit by hand
export(MaxQuantAnalysisInfo)
export(PlotAcquisitionCycle)
export(PlotAllDynamicRange)
export(PlotAndromedaScore)
export(PlotCharge)
export(PlotCombinedDynamicRange)
export(PlotHydrophobicity)
export(PlotIntensity)
export(PlotIsotopePattern)
export(PlotMsMs)
export(PlotPCA)
export(PlotPTM)
export(PlotPTMAcrossSamples)
export(PlotPeaks)
export(PlotPeptidesIdentified)
export(PlotProteaseSpecificity)
export(PlotProteinCoverage)
export(PlotProteinOverlap)
export(PlotProteinPeptideRatio)
export(PlotProteinsIdentified)
export(PlotTotalIonCurrent)
export(PlotiRT)
export(PlotiRTScore)
export(ReportTables)
export(generateReport)
export(make_MQCombined)
import(RColorBrewer)
import(ggplot2)
import(ggpubr)
import(purrr)
import(rmarkdown)
importFrom(RColorBrewer,brewer.pal)
importFrom(cowplot,draw_label)
importFrom(cowplot,ggdraw)
importFrom(cowplot,plot_grid)
importFrom(dplyr,arrange)
importFrom(dplyr,coalesce)
importFrom(dplyr,contains)
importFrom(dplyr,desc)
importFrom(dplyr,filter)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,lag)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,select)
importFrom(dplyr,summarise)
importFrom(ggforce,facet_wrap_paginate)
importFrom(gghalves,geom_half_violin)
importFrom(ggrepel,geom_text_repel)
importFrom(grDevices,colorRampPalette)
importFrom(grid,grid.draw)
importFrom(grid,grobName)
importFrom(grid,grobTree)
importFrom(grid,unit.c)
importFrom(gridExtra,marrangeGrob)
importFrom(gtable,gtable_add_cols)
importFrom(gtable,gtable_add_grob)
importFrom(knitr,kable)
importFrom(magrittr,"%>%")
importFrom(plyr,defaults)
importFrom(readr,read_delim)
importFrom(reshape2,dcast)
importFrom(reshape2,melt)
importFrom(rlang,abort)
importFrom(scales,zero_range)
importFrom(stats,aggregate)
importFrom(stats,coef)
importFrom(stats,complete.cases)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,reorder)
importFrom(stringr,str_count)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_squish)
importFrom(stringr,str_wrap)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,separate_rows)
importFrom(tidyr,starts_with)
importFrom(tools,toTitleCase)
importFrom(utils,head)