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DESCRIPTION
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Package: flashr
Encoding: UTF-8
Type: Package
Version: 0.6-8
Date: 2021-05-17
Title: Empirical Bayes Matrix Factorization
Authors@R: c(person("Matthew","Stephens",role=c("aut","cre"),
email="[email protected]"),
person("Wei","Wang",role="aut"),
person("Jason","Willwerscheid",role="aut"),
person("Peter","Carbonetto",role="ctb"))
Maintainer: Matthew Stephens <[email protected]>
Description: Methods for matrix factorization based on "Empirical
Bayes Matrix Factorization" (W. Wang & M. Stephens, 2018,
<https://arxiv.org/abs/1802.06931>). The name "flashr" comes from
"Factors and Loadings by Adaptive SHrinkage in R".
Depends: R (>= 3.3)
Imports:
ashr (>= 2.2-4),
ggplot2,
graphics,
grDevices,
methods,
reshape2,
softImpute,
stats,
utils
Suggests:
ebnm (>= 0.1-36),
testthat,
knitr,
rmarkdown,
REBayes,
Rmosek
License: BSD_3_clause + file LICENSE
URL: http://github.com/stephenslab/flashr
BugReports: http://github.com/stephenslab/flashr/issues
VignetteBuilder: knitr
LazyData: true
RoxygenNote: 6.1.1
Remotes:
stephens999/ashr,
stephenslab/ebnm