diff --git a/404.html b/404.html index 270ecf3..bd4b527 100644 --- a/404.html +++ b/404.html @@ -32,7 +32,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -97,7 +97,7 @@

Page not found (404)

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/articles/index.html b/articles/index.html index c3dcf4c..b686360 100644 --- a/articles/index.html +++ b/articles/index.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -69,7 +69,7 @@

All vignettes

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/articles/introduction.html b/articles/introduction.html index 89fdb4e..f6ef76c 100644 --- a/articles/introduction.html +++ b/articles/introduction.html @@ -32,7 +32,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -77,7 +77,7 @@

Overview of the tidyHeatmap package

Stefano Mangiola

-

2024-09-03

+

2024-10-31

Source: vignettes/introduction.Rmd @@ -296,7 +296,8 @@

Plotting## Warning: Using one column matrices in `filter()` was deprecated in dplyr 1.1.0. ## ℹ Please use one dimensional logical vectors instead. ## ℹ The deprecated feature was likely used in the tidyHeatmap package. -## Please report the issue at <https://github.com/stemangiola/tidyHeatmap>. +## Please report the issue at +## <https://github.com/stemangiola/tidyHeatmap/issues>. ## This warning is displayed once every 8 hours. ## Call `lifecycle::last_lifecycle_warnings()` to see where this warning was ## generated. @@ -772,32 +773,32 @@

Session Info## [8] base ## ## other attached packages: -## [1] patchwork_1.2.0 ggplot2_3.5.1 forcats_1.0.0 tidyHeatmap_1.10.2 +## [1] patchwork_1.3.0 ggplot2_3.5.1 forcats_1.0.0 tidyHeatmap_1.10.5 ## [5] tidyr_1.3.1 dplyr_1.1.4 ## ## loaded via a namespace (and not attached): ## [1] viridis_0.6.5 sass_0.4.9 utf8_1.2.4 ## [4] generics_0.1.3 shape_1.4.6.1 digest_0.6.37 -## [7] magrittr_2.0.3 RColorBrewer_1.1-3 evaluate_0.24.0 +## [7] magrittr_2.0.3 RColorBrewer_1.1-3 evaluate_1.0.1 ## [10] iterators_1.0.14 circlize_0.4.16 fastmap_1.2.0 -## [13] foreach_1.5.2 doParallel_1.0.17 jsonlite_1.8.8 +## [13] foreach_1.5.2 doParallel_1.0.17 jsonlite_1.8.9 ## [16] GlobalOptions_0.1.2 gridExtra_2.3 ComplexHeatmap_2.18.0 ## [19] purrr_1.0.2 fansi_1.0.6 viridisLite_0.4.2 ## [22] scales_1.3.0 codetools_0.2-20 textshaping_0.4.0 ## [25] jquerylib_0.1.4 cli_3.6.3 rlang_1.1.4 -## [28] crayon_1.5.3 munsell_0.5.1 withr_3.0.1 +## [28] crayon_1.5.3 munsell_0.5.1 withr_3.0.2 ## [31] cachem_1.1.0 yaml_2.3.10 tools_4.4.1 ## [34] parallel_4.4.1 colorspace_2.1-1 GetoptLong_1.0.5 ## [37] BiocGenerics_0.48.1 vctrs_0.6.5 R6_2.5.1 -## [40] png_0.1-8 stats4_4.4.1 matrixStats_1.3.0 -## [43] lifecycle_1.0.4 S4Vectors_0.40.2 fs_1.6.4 +## [40] png_0.1-8 stats4_4.4.1 matrixStats_1.4.1 +## [43] lifecycle_1.0.4 S4Vectors_0.40.2 fs_1.6.5 ## [46] IRanges_2.36.0 clue_0.3-65 cluster_2.1.6 -## [49] ragg_1.3.2 dendextend_1.17.1 pkgconfig_2.0.3 -## [52] desc_1.4.3 gtable_0.3.5 pkgdown_2.1.0 -## [55] pillar_1.9.0 bslib_0.8.0 glue_1.7.0 -## [58] systemfonts_1.1.0 highr_0.11 xfun_0.47 +## [49] ragg_1.3.3 dendextend_1.18.1 pkgconfig_2.0.3 +## [52] desc_1.4.3 gtable_0.3.6 pkgdown_2.1.1 +## [55] pillar_1.9.0 bslib_0.8.0 glue_1.8.0 +## [58] systemfonts_1.1.0 highr_0.11 xfun_0.48 ## [61] tibble_3.2.1 tidyselect_1.2.1 knitr_1.48 -## [64] farver_2.1.2 rjson_0.2.22 htmltools_0.5.8.1 +## [64] farver_2.1.2 rjson_0.2.23 htmltools_0.5.8.1 ## [67] labeling_0.4.3 rmarkdown_2.28 compiler_4.4.1 @@ -817,7 +818,7 @@

Session Info

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/authors.html b/authors.html index a4f8c52..ea5d4c1 100644 --- a/authors.html +++ b/authors.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -96,7 +96,7 @@

Citation

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/index.html b/index.html index daec21a..725863c 100644 --- a/index.html +++ b/index.html @@ -33,7 +33,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -748,7 +748,7 @@

Links

@@ -794,7 +794,7 @@

Dev status

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/pkgdown.yml b/pkgdown.yml index 7f032c4..2b0f2c4 100644 --- a/pkgdown.yml +++ b/pkgdown.yml @@ -1,6 +1,6 @@ pandoc: 2.7.3 -pkgdown: 2.1.0 +pkgdown: 2.1.1 pkgdown_sha: ~ articles: introduction: introduction.html -last_built: 2024-09-03T06:56Z +last_built: 2024-10-31T03:16Z diff --git a/reference/N52.html b/reference/N52.html index d649855..9300faf 100644 --- a/reference/N52.html +++ b/reference/N52.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -90,7 +90,7 @@

References

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/Rplot001.png b/reference/Rplot001.png deleted file mode 100644 index 18322f5..0000000 Binary files a/reference/Rplot001.png and /dev/null differ diff --git a/reference/Rplot002.png b/reference/Rplot002.png deleted file mode 100644 index 0543cb9..0000000 Binary files a/reference/Rplot002.png and /dev/null differ diff --git a/reference/add_annotation.html b/reference/add_annotation.html index f7f5d90..dff4014 100644 --- a/reference/add_annotation.html +++ b/reference/add_annotation.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -134,7 +134,7 @@

References

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/add_attr.html b/reference/add_attr.html index 6d0dcc6..34af769 100644 --- a/reference/add_attr.html +++ b/reference/add_attr.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -96,7 +96,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/add_bar-method.html b/reference/add_bar-method.html index e14466f..efb79ae 100644 --- a/reference/add_bar-method.html +++ b/reference/add_bar-method.html @@ -18,7 +18,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -106,9 +106,9 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -144,7 +144,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/add_class.html b/reference/add_class.html index a12ec5b..414a37f 100644 --- a/reference/add_class.html +++ b/reference/add_class.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -92,7 +92,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/add_line-method.html b/reference/add_line-method.html index 0af9f5b..7e5e796 100644 --- a/reference/add_line-method.html +++ b/reference/add_line-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -101,7 +101,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -132,7 +132,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/add_point-method.html b/reference/add_point-method.html index 11b5d4c..7f2cd60 100644 --- a/reference/add_point-method.html +++ b/reference/add_point-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -101,7 +101,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -132,7 +132,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/add_tile-method.html b/reference/add_tile-method.html index 3a3453b..a355213 100644 --- a/reference/add_tile-method.html +++ b/reference/add_tile-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -101,7 +101,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -131,7 +131,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/annot_to_list.html b/reference/annot_to_list.html index da9afef..8d76a04 100644 --- a/reference/annot_to_list.html +++ b/reference/annot_to_list.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -88,7 +88,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/annotation_bar-method-1.png b/reference/annotation_bar-method-1.png index 574fddc..9e926f9 100644 Binary files a/reference/annotation_bar-method-1.png and b/reference/annotation_bar-method-1.png differ diff --git a/reference/annotation_bar-method.html b/reference/annotation_bar-method.html index a5aa7e6..0a8df21 100644 --- a/reference/annotation_bar-method.html +++ b/reference/annotation_bar-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -101,7 +101,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -142,7 +142,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/annotation_line-method-1.png b/reference/annotation_line-method-1.png index 521cfcc..3635efd 100644 Binary files a/reference/annotation_line-method-1.png and b/reference/annotation_line-method-1.png differ diff --git a/reference/annotation_line-method.html b/reference/annotation_line-method.html index cc6ab1d..1aa0632 100644 --- a/reference/annotation_line-method.html +++ b/reference/annotation_line-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -101,7 +101,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -141,7 +141,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/annotation_point-method-1.png b/reference/annotation_point-method-1.png index 7a4dde4..3723f74 100644 Binary files a/reference/annotation_point-method-1.png and b/reference/annotation_point-method-1.png differ diff --git a/reference/annotation_point-method.html b/reference/annotation_point-method.html index 64c06ef..4779af5 100644 --- a/reference/annotation_point-method.html +++ b/reference/annotation_point-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -101,7 +101,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -141,7 +141,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/annotation_tile-method-1.png b/reference/annotation_tile-method-1.png index 8b62415..0779bfa 100644 Binary files a/reference/annotation_tile-method-1.png and b/reference/annotation_tile-method-1.png differ diff --git a/reference/annotation_tile-method-2.png b/reference/annotation_tile-method-2.png index 529958d..8078ff1 100644 Binary files a/reference/annotation_tile-method-2.png and b/reference/annotation_tile-method-2.png differ diff --git a/reference/annotation_tile-method.html b/reference/annotation_tile-method.html index 426e717..892ca5d 100644 --- a/reference/annotation_tile-method.html +++ b/reference/annotation_tile-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -101,7 +101,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -148,7 +148,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/as_ComplexHeatmap-method-1.png b/reference/as_ComplexHeatmap-method-1.png index ccf510c..b4478bb 100644 Binary files a/reference/as_ComplexHeatmap-method-1.png and b/reference/as_ComplexHeatmap-method-1.png differ diff --git a/reference/as_ComplexHeatmap-method.html b/reference/as_ComplexHeatmap-method.html index dc31276..4803e5a 100644 --- a/reference/as_ComplexHeatmap-method.html +++ b/reference/as_ComplexHeatmap-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -85,7 +85,7 @@

Value

Details

-

[Maturing]

+

maturing

References

@@ -124,7 +124,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/as_matrix.html b/reference/as_matrix.html index 78251a2..9ea074e 100644 --- a/reference/as_matrix.html +++ b/reference/as_matrix.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -96,7 +96,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/check_if_counts_is_na.html b/reference/check_if_counts_is_na.html index 0c30be2..1cfe7c7 100644 --- a/reference/check_if_counts_is_na.html +++ b/reference/check_if_counts_is_na.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -92,7 +92,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/check_if_duplicated_genes.html b/reference/check_if_duplicated_genes.html index 3b976e8..3cc8fe3 100644 --- a/reference/check_if_duplicated_genes.html +++ b/reference/check_if_duplicated_genes.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -100,7 +100,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/check_if_wrong_input.html b/reference/check_if_wrong_input.html index 5a2697d..b417ba7 100644 --- a/reference/check_if_wrong_input.html +++ b/reference/check_if_wrong_input.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -96,7 +96,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/drop_class.html b/reference/drop_class.html index 2172cfc..16c8b3c 100644 --- a/reference/drop_class.html +++ b/reference/drop_class.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -92,7 +92,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/error_if_log_transformed.html b/reference/error_if_log_transformed.html index defd568..3c78498 100644 --- a/reference/error_if_log_transformed.html +++ b/reference/error_if_log_transformed.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -92,7 +92,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/get_abundance_norm_if_exists.html b/reference/get_abundance_norm_if_exists.html index edd351c..bd5a9b9 100644 --- a/reference/get_abundance_norm_if_exists.html +++ b/reference/get_abundance_norm_if_exists.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -92,7 +92,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/get_elements.html b/reference/get_elements.html index 60cf049..229746a 100644 --- a/reference/get_elements.html +++ b/reference/get_elements.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -96,7 +96,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/get_elements_features.html b/reference/get_elements_features.html index e9692b2..21caf80 100644 --- a/reference/get_elements_features.html +++ b/reference/get_elements_features.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -100,7 +100,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/get_elements_features_abundance.html b/reference/get_elements_features_abundance.html index 39673e1..757629a 100644 --- a/reference/get_elements_features_abundance.html +++ b/reference/get_elements_features_abundance.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -110,7 +110,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/get_sample_counts.html b/reference/get_sample_counts.html index 4f757d9..b9fb97e 100644 --- a/reference/get_sample_counts.html +++ b/reference/get_sample_counts.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -96,7 +96,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/get_sample_transcript.html b/reference/get_sample_transcript.html index c195cd5..947362d 100644 --- a/reference/get_sample_transcript.html +++ b/reference/get_sample_transcript.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -96,7 +96,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/get_sample_transcript_counts.html b/reference/get_sample_transcript_counts.html index 095bd16..0dab14f 100644 --- a/reference/get_sample_transcript_counts.html +++ b/reference/get_sample_transcript_counts.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -100,7 +100,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/get_x_y_annotation_columns.html b/reference/get_x_y_annotation_columns.html index 746ba88..6656f4b 100644 --- a/reference/get_x_y_annotation_columns.html +++ b/reference/get_x_y_annotation_columns.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -100,7 +100,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/heatmap-method-1.png b/reference/heatmap-method-1.png index a975086..e858753 100644 Binary files a/reference/heatmap-method-1.png and b/reference/heatmap-method-1.png differ diff --git a/reference/heatmap-method.html b/reference/heatmap-method.html index b5fb9a4..f9e5f3d 100644 --- a/reference/heatmap-method.html +++ b/reference/heatmap-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -172,7 +172,7 @@

Value

Details

-

[Maturing]

+

maturing

This function takes a tbl as an input and creates a `ComplexHeatmap` plot. The information is stored in a `InputHeatmap` object that is updated along the pipe statement, for example adding annotation layers.

@@ -209,7 +209,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/ifelse2_pipe.html b/reference/ifelse2_pipe.html index 3af0be6..7efb44d 100644 --- a/reference/ifelse2_pipe.html +++ b/reference/ifelse2_pipe.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -108,7 +108,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/ifelse_pipe.html b/reference/ifelse_pipe.html index f67868e..f773aab 100644 --- a/reference/ifelse_pipe.html +++ b/reference/ifelse_pipe.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -100,7 +100,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/index.html b/reference/index.html index 82f5113..811cdf7 100644 --- a/reference/index.html +++ b/reference/index.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -278,7 +278,7 @@

All functions
-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/input_heatmap.html b/reference/input_heatmap.html index c2050e8..878c8c1 100644 --- a/reference/input_heatmap.html +++ b/reference/input_heatmap.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -144,7 +144,7 @@

References

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/layer_arrow_down-method-1.png b/reference/layer_arrow_down-method-1.png index 0a9e2f5..6db1a8a 100644 Binary files a/reference/layer_arrow_down-method-1.png and b/reference/layer_arrow_down-method-1.png differ diff --git a/reference/layer_arrow_down-method.html b/reference/layer_arrow_down-method.html index c2bc9d0..8e6df2c 100644 --- a/reference/layer_arrow_down-method.html +++ b/reference/layer_arrow_down-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -93,7 +93,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -133,7 +133,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/layer_arrow_up-method-1.png b/reference/layer_arrow_up-method-1.png index 49b374e..2f565b5 100644 Binary files a/reference/layer_arrow_up-method-1.png and b/reference/layer_arrow_up-method-1.png differ diff --git a/reference/layer_arrow_up-method.html b/reference/layer_arrow_up-method.html index a2c1c16..05a9d98 100644 --- a/reference/layer_arrow_up-method.html +++ b/reference/layer_arrow_up-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -93,7 +93,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -133,7 +133,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/layer_asterisk-method-1.png b/reference/layer_asterisk-method-1.png index 6261850..2c26725 100644 Binary files a/reference/layer_asterisk-method-1.png and b/reference/layer_asterisk-method-1.png differ diff --git a/reference/layer_asterisk-method.html b/reference/layer_asterisk-method.html index 77d5973..6ecd126 100644 --- a/reference/layer_asterisk-method.html +++ b/reference/layer_asterisk-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -93,7 +93,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -133,7 +133,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/layer_diamond-method-1.png b/reference/layer_diamond-method-1.png index d131a00..0ae9203 100644 Binary files a/reference/layer_diamond-method-1.png and b/reference/layer_diamond-method-1.png differ diff --git a/reference/layer_diamond-method.html b/reference/layer_diamond-method.html index fedbb88..47faf60 100644 --- a/reference/layer_diamond-method.html +++ b/reference/layer_diamond-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -93,7 +93,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -133,7 +133,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/layer_point-method-1.png b/reference/layer_point-method-1.png index 45117fa..a40af43 100644 Binary files a/reference/layer_point-method-1.png and b/reference/layer_point-method-1.png differ diff --git a/reference/layer_point-method.html b/reference/layer_point-method.html index 9ce3514..4f2c171 100644 --- a/reference/layer_point-method.html +++ b/reference/layer_point-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -93,7 +93,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -133,7 +133,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/layer_square-method-1.png b/reference/layer_square-method-1.png index 782c8ce..f6dc5cc 100644 Binary files a/reference/layer_square-method-1.png and b/reference/layer_square-method-1.png differ diff --git a/reference/layer_square-method.html b/reference/layer_square-method.html index bca96f3..233dfc8 100644 --- a/reference/layer_square-method.html +++ b/reference/layer_square-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -93,7 +93,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -133,7 +133,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/layer_star-method-1.png b/reference/layer_star-method-1.png index 1575107..5a6975b 100644 Binary files a/reference/layer_star-method-1.png and b/reference/layer_star-method-1.png differ diff --git a/reference/layer_star-method.html b/reference/layer_star-method.html index 08093fc..d66059e 100644 --- a/reference/layer_star-method.html +++ b/reference/layer_star-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -93,7 +93,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -133,7 +133,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/layer_text-method-1.png b/reference/layer_text-method-1.png index 97d39b3..411b33f 100644 Binary files a/reference/layer_text-method-1.png and b/reference/layer_text-method-1.png differ diff --git a/reference/layer_text-method-2.png b/reference/layer_text-method-2.png index bb4548a..cf33c20 100644 Binary files a/reference/layer_text-method-2.png and b/reference/layer_text-method-2.png differ diff --git a/reference/layer_text-method.html b/reference/layer_text-method.html index 93e478b..ee01bdb 100644 --- a/reference/layer_text-method.html +++ b/reference/layer_text-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -97,7 +97,7 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -148,7 +148,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/parse_formula.html b/reference/parse_formula.html index 62286c5..cb8c8dc 100644 --- a/reference/parse_formula.html +++ b/reference/parse_formula.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -88,7 +88,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/pasilla.html b/reference/pasilla.html index 7d80340..8f4e7aa 100644 --- a/reference/pasilla.html +++ b/reference/pasilla.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -90,7 +90,7 @@

References

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/prepend.html b/reference/prepend.html index 2b21701..ebdf9f7 100644 --- a/reference/prepend.html +++ b/reference/prepend.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -96,7 +96,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/quo_names.html b/reference/quo_names.html index 5143582..e0b9414 100644 --- a/reference/quo_names.html +++ b/reference/quo_names.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -88,7 +88,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/save_pdf-Heatmap-method.html b/reference/save_pdf-Heatmap-method.html index 76b8374..946dc0f 100644 --- a/reference/save_pdf-Heatmap-method.html +++ b/reference/save_pdf-Heatmap-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -107,7 +107,7 @@

Arguments

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/save_pdf-InputHeatmap-method.html b/reference/save_pdf-InputHeatmap-method.html index 8cbe274..885f41a 100644 --- a/reference/save_pdf-InputHeatmap-method.html +++ b/reference/save_pdf-InputHeatmap-method.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -107,7 +107,7 @@

Arguments

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/save_pdf-methods.html b/reference/save_pdf-methods.html index 885d04b..c0e2c40 100644 --- a/reference/save_pdf-methods.html +++ b/reference/save_pdf-methods.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -103,7 +103,7 @@

Value

Details

-

[Maturing]

+

maturing

It simply save an `Heatmap` to a PDF file use pdf() function in the back end

@@ -124,7 +124,7 @@

Examples

.value = `count normalised adjusted`, ) |> save_pdf(tempfile()) -#> tidyHeatmap says: saving 6.67 x 6.67 in image +#> tidyHeatmap says: saving 7 x 7 in image
@@ -141,7 +141,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/scale_design.html b/reference/scale_design.html index 23bc01d..4e70e6d 100644 --- a/reference/scale_design.html +++ b/reference/scale_design.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -92,7 +92,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/scale_robust.html b/reference/scale_robust.html index d69d4f7..84fd3a3 100644 --- a/reference/scale_robust.html +++ b/reference/scale_robust.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -98,7 +98,7 @@

References

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/select_closest_pairs.html b/reference/select_closest_pairs.html index e9187d8..4550916 100644 --- a/reference/select_closest_pairs.html +++ b/reference/select_closest_pairs.html @@ -17,7 +17,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -88,7 +88,7 @@

Value

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/split-methods-1.png b/reference/split-methods-1.png index b18ca8c..9f825b0 100644 Binary files a/reference/split-methods-1.png and b/reference/split-methods-1.png differ diff --git a/reference/split-methods-2.png b/reference/split-methods-2.png index a1eaf90..d2bd968 100644 Binary files a/reference/split-methods-2.png and b/reference/split-methods-2.png differ diff --git a/reference/split-methods.html b/reference/split-methods.html index 9bbeba3..7b551ee 100644 --- a/reference/split-methods.html +++ b/reference/split-methods.html @@ -18,7 +18,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -99,9 +99,9 @@

Value

Details

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

-

[Maturing]

+

maturing

It uses `ComplexHeatmap` as visualisation tool.

@@ -156,7 +156,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.

diff --git a/reference/wrap_heatmap-method.html b/reference/wrap_heatmap-method.html index da670bd..402eb23 100644 --- a/reference/wrap_heatmap-method.html +++ b/reference/wrap_heatmap-method.html @@ -23,7 +23,7 @@ tidyHeatmap - 1.10.2 + 1.10.5 @@ -157,7 +157,7 @@

Examples

-

Site built with pkgdown 2.1.0.

+

Site built with pkgdown 2.1.1.