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Create a BGZIP index (BGZF) on the fly #17

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nh13 opened this issue Jun 22, 2022 · 2 comments
Open

Create a BGZIP index (BGZF) on the fly #17

nh13 opened this issue Jun 22, 2022 · 2 comments
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enhancement New feature or request

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@nh13
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nh13 commented Jun 22, 2022

See: http://www.htslib.org/doc/bgzip.html. This should not be too hard if you keep the uncompressed and compressed byte offset of each block you are processing. Right now, I have to use bgzip to create the index.
@sstadick
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I do really want this and just haven't gotten around to it / needed it myself yet.

@sstadick sstadick added the enhancement New feature or request label Jun 23, 2022
@nh13
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nh13 commented Jun 23, 2022

Maybe I’ll make a PR

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@nh13 @sstadick