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Susan Vanderplas
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Write my own versionless requirements assembly code in py-deps, ensure py-system-pkgs is read only.
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-101
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+217
-101
lines changed

‎py-deps

+37-1
Original file line numberDiff line numberDiff line change
@@ -1,10 +1,46 @@
11
#!/bin/bash
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set_union () {
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sort $1 $2 | uniq
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}
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set_intersection () {
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sort $1 $2 | uniq -d
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}
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set_difference () {
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sort $1 $2 $2 | uniq -u
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}
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set_symmetric_difference() {
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sort $1 $2 | uniq -u
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}
217

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FindRequirements() {
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grep -r "from .* import .*" --include "*.qmd" . | awk '{ match( $0, /:from ([A-z0-9]*).?.*? import .*$/, arr) ; if(arr[1] != "") print arr[1] } ' | sort | uniq > py-imports
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grep -r "import .* as .*" --include "*.qmd" . | awk '{ match( $0, /:import ([A-z0-9]*).?.*? as .*$/, arr) ; if(arr[1] != "") print arr[1] } ' | sort | uniq >> py-imports
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grep -r "import .*" --include "*.qmd" . | awk '{ match( $0, /:import ([A-z0-9]*).*$/, arr) ; if(arr[1] != "") print arr[1] } ' | sort | uniq >> py-imports
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# deduplicate
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cat requirements.txt >> py-imports
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cat py-imports | sort | uniq > py-imports-clean
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# replace PIL with pillow... ugh python sucks
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sed -i -e 's/^PIL$/pillow/g' py-imports-clean
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# replace sklearn with scikit-learn
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sed -i -e 's/^sklearn$/scikit-learn/g' py-imports-clean
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set_difference py-imports-clean py-system-pkgs > py-imports-install
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rm py-imports py-imports-clean
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mv py-imports-install requirements.txt
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}
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SetRequirements() {
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# Update dependencies required by the book
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# pipdeptree -r -f --warn silence | grep -E '^[a-zA-Z0-9\-]+' > requirements.txt
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pip3 freeze > requirements.txt
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pip-chill --no-version > requirements.txt
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FindRequirements
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echo "Requirements file updated successfully!"
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}
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‎py-system-pkgs

+159
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,159 @@
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string
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re
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difflib
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textwrap
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unicodedata
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stringprep
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readline
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rlcompleter
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struct
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codecs
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datetime
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zoneinfo
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calendar
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collections
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heapq
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bisect
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array
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weakref
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types
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copy
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pprint
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reprlib
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enum
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graphlib
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numbers
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math
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cmath
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decimal
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fractions
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random
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statistics
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itertools
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functools
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operator
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pathlib
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os
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fileinput
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stat
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filecmp
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tempfile
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glob
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fnmatch
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linecache
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shutil
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pickle
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copyreg
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shelve
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marshal
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dbm
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sqlite3
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zlib
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gzip
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bz2
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lzma
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zipfile
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tarfile
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csv
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configparser
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tomllib
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netrc
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plist
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hashlib
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hmac
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secrets
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io
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time
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argparse
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getopt
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logging
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getpass
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curses
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platform
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errno
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ctypes
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threading
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multiprocessing
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concurrent
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subprocess
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sched
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queue
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contextvars
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asyncio
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socket
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ssl
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select
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selectors
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signal
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mmap
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email
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json
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mailbox
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mimetypes
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base64
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binascii
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quopri
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html
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urllib
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wsgiref
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webbrowser
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ftplib
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poplib
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imaplib
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smtplib
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uuid
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socketserver
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xmlrpc
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ipaddress
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wave
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colorsys
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gettext
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locale
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turtle
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cmd
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shlex
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tkinter
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typing
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pydoc
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doctest
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unittest
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test
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bdb
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faulthandler
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pdb
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timeit
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trace
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tracemalloc
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ensurepip
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venv
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zipapp
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sys
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sysconfig
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builtins
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warnings
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dataclasses
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contextlib
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abc
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atexit
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traceback
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gc
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inspect
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site
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code
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codeop
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zipimport
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pkgutil
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modulefinder
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runpy
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importlib
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ast
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symtable
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token
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keyword
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tokenize
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tabnanny
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pyclbr
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compileall
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dis
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pickletools

‎requirements.txt

+21-100
Original file line numberDiff line numberDiff line change
@@ -1,100 +1,21 @@
1-
annotated-types==0.7.0
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anyio==4.4.0
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asttokens==2.4.1
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attrs==24.2.0
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beartype==0.18.5
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beautifulsoup4==4.12.3
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bs4==0.0.2
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certifi==2024.8.30
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charset-normalizer==3.3.2
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click==8.1.7
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colorama==0.4.6
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comm==0.2.2
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contourpy==1.3.0
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cycler==0.12.1
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DateTime==5.5
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debugpy==1.8.5
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decorator==5.1.1
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distro==1.9.0
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executing==2.1.0
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fonttools==4.53.1
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griffe==1.3.1
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h11==0.14.0
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httpcore==1.0.5
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httpx==0.27.2
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idna==3.10
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importlib_metadata==8.5.0
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importlib_resources==6.4.5
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ipykernel==6.29.5
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ipython==8.27.0
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jedi==0.19.1
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jiter==0.5.0
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jsonschema==4.23.0
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jsonschema-specifications==2023.12.1
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jupyter_client==8.6.3
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jupyter_core==5.7.2
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kiwisolver==1.4.7
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markdown-it-py==3.0.0
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matplotlib==3.9.2
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matplotlib-inline==0.1.7
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mdurl==0.1.2
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mizani==0.12.2
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nest-asyncio==1.6.0
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numpy==2.1.1
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openai==1.45.1
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packaging==24.1
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palmerpenguins==0.1.4
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pandas==2.2.2
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parso==0.8.4
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pathlib==1.0.1
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patsy==0.5.6
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pexpect==4.9.0
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pillow==10.4.0
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pipdeptree==2.23.3
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platformdirs==4.3.3
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plotly==5.24.1
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plotnine==0.13.6
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plum-dispatch==2.5.2
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polars==1.7.1
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prompt_toolkit==3.0.47
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psutil==6.0.0
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ptyprocess==0.7.0
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pure_eval==0.2.3
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pyarrow==17.0.0
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pydantic==2.9.1
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pydantic_core==2.23.4
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Pygments==2.18.0
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pyparsing==3.1.4
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pyreadr==0.5.2
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python-dateutil==2.9.0.post0
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python-dotenv==1.0.1
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pytz==2024.2
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PyYAML==6.0.2
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pyzmq==26.2.0
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quartodoc==0.7.6
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referencing==0.35.1
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requests==2.32.3
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rich==13.8.1
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rpds-py==0.20.0
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scipy==1.14.1
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seaborn==0.13.2
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six==1.16.0
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skimpy==0.0.15
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sniffio==1.3.1
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soupsieve==2.6
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sphobjinv==2.3.1.1
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stack-data==0.6.3
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statsmodels==0.14.3
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tabulate==0.9.0
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tenacity==9.0.0
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tornado==6.4.1
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tqdm==4.66.5
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traitlets==5.14.3
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typeguard==4.3.0
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typing_extensions==4.12.2
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tzdata==2024.1
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urllib3==2.2.3
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watchdog==5.0.2
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wcwidth==0.2.13
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zipp==3.20.2
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zope.interface==7.0.3
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astropy
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babel
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bs4
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gspread
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IPython
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matplotlib
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numpy
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nycflights13
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palmerpenguins
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pandas
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pandas_access
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pillow
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plotly
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plotnine
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polars
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pyreadr
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requests
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seaborn
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skimpy
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statsmodels
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tabulate

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