From 62f740452ad2a607762040e5e315360f7917a6c6 Mon Sep 17 00:00:00 2001 From: Vanessasaurus <814322+vsoch@users.noreply.github.com> Date: Fri, 5 Apr 2024 16:13:59 -0600 Subject: [PATCH] fix: ensure we install datrie (#37) Problem: newer version of python (via conda) missing datrie (the wheel fails to build) Solution: install datrie with conda This should fix #36 Signed-off-by: vsoch Co-authored-by: vsoch --- snakemake_executor_plugin_googlebatch/command.py | 1 + 1 file changed, 1 insertion(+) diff --git a/snakemake_executor_plugin_googlebatch/command.py b/snakemake_executor_plugin_googlebatch/command.py index dbe91cb..602eff2 100644 --- a/snakemake_executor_plugin_googlebatch/command.py +++ b/snakemake_executor_plugin_googlebatch/command.py @@ -44,6 +44,7 @@ bash ./miniconda.sh -b -u -p /opt/conda rm -rf ./miniconda.sh +conda install datrie --yes which python /opt/conda/bin/python --version ./install-snek.sh https://github.com/snakemake/snakemake-storage-plugin-gcs