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hi. I recently executed this pipeline for my job.
But after I ran this pipeline and removed the output of the fastqc, I can't reproduce the output of fastqc (qc/fastqc/A-1.html for example).
After some experiment, I find this is because only first line is recognized as "inputs" by snakemake.
So I fixed under the lines from
hi. I recently executed this pipeline for my job.
But after I ran this pipeline and removed the output of the fastqc, I can't reproduce the output of fastqc (qc/fastqc/A-1.html for example).
After some experiment, I find this is because only first line is recognized as "inputs" by snakemake.
So I fixed under the lines from
dna-seq-gatk-variant-calling/rules/qc.smk
Lines 24 to 27 in 6bde762
to
I can get the expected results.
Is this bug of expand module? Please explain what is happend.
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