diff --git a/smithy-model/src/main/java/software/amazon/smithy/model/loader/LoaderTraitMap.java b/smithy-model/src/main/java/software/amazon/smithy/model/loader/LoaderTraitMap.java
index 1e15e276c92..639cebc889f 100644
--- a/smithy-model/src/main/java/software/amazon/smithy/model/loader/LoaderTraitMap.java
+++ b/smithy-model/src/main/java/software/amazon/smithy/model/loader/LoaderTraitMap.java
@@ -21,9 +21,11 @@
 
 import java.util.Collections;
 import java.util.HashMap;
+import java.util.HashSet;
 import java.util.LinkedHashMap;
 import java.util.List;
 import java.util.Map;
+import java.util.Set;
 import java.util.logging.Logger;
 import software.amazon.smithy.model.SourceException;
 import software.amazon.smithy.model.SourceLocation;
@@ -47,6 +49,7 @@ final class LoaderTraitMap {
     private final List<ValidationEvent> events;
     private final boolean allowUnknownTraits;
     private final Map<ShapeId, Map<ShapeId, Trait>> unclaimed = new HashMap<>();
+    private final Set<ShapeId> claimed = new HashSet<>();
 
     LoaderTraitMap(TraitFactory traitFactory, List<ValidationEvent> events, boolean allowUnknownTraits) {
         this.traitFactory = traitFactory;
@@ -147,12 +150,19 @@ private void applyTraitsToShape(AbstractShapeBuilder<?, ?> shape, Trait trait) {
     // Traits can be applied to synthesized members inherited from mixins. Applying these traits is deferred until
     // the point in which mixin members are synthesized into shapes.
     Map<ShapeId, Trait> claimTraitsForShape(ShapeId id) {
-        return unclaimed.containsKey(id) ? unclaimed.remove(id) : Collections.emptyMap();
+        if (!unclaimed.containsKey(id)) {
+            return Collections.emptyMap();
+        }
+        claimed.add(id);
+        return unclaimed.get(id);
     }
 
     // Emit events if any traits were applied to shapes that weren't found in the model.
     void emitUnclaimedTraits() {
         for (Map.Entry<ShapeId, Map<ShapeId, Trait>> entry : unclaimed.entrySet()) {
+            if (claimed.contains(entry.getKey())) {
+                continue;
+            }
             for (Map.Entry<ShapeId, Trait> traitEntry : entry.getValue().entrySet()) {
                 events.add(ValidationEvent.builder()
                         .id(Validator.MODEL_ERROR)
diff --git a/smithy-model/src/test/java/software/amazon/smithy/model/loader/ModelAssemblerTest.java b/smithy-model/src/test/java/software/amazon/smithy/model/loader/ModelAssemblerTest.java
index 6f3950fc00c..890f4e7f053 100644
--- a/smithy-model/src/test/java/software/amazon/smithy/model/loader/ModelAssemblerTest.java
+++ b/smithy-model/src/test/java/software/amazon/smithy/model/loader/ModelAssemblerTest.java
@@ -1341,4 +1341,31 @@ public void exceptionsThrownWhenCreatingTraitsDontCrashSmithy() {
         assertThat(result.getValidationEvents(Severity.ERROR).get(0).getMessage(),
                    equalTo("Error creating trait `smithy.foo#baz`: Oops!"));
     }
+
+    @Test
+    public void resolvesDuplicateTraitApplicationsToDuplicateMixedInMembers() throws Exception {
+        String model = IoUtils.readUtf8File(Paths.get(getClass().getResource("mixins/apply-to-mixed-member.json").toURI()));
+        // Should be able to de-conflict the apply statements when the same model is loaded multiple times.
+        // See https://github.com/smithy-lang/smithy/issues/2004
+        Model.assembler()
+                .addUnparsedModel("test.json", model)
+                .addUnparsedModel("test2.json", model)
+                .addUnparsedModel("test3.json", model)
+                .assemble()
+                .unwrap();
+    }
+
+    @Test
+    public void resolvesDuplicateTraitApplicationsToSameMixedInMember() throws Exception {
+        String modelToApplyTo = IoUtils.readUtf8File(Paths.get(getClass().getResource("mixins/mixed-member.smithy").toURI()));
+        String modelWithApply = IoUtils.readUtf8File(Paths.get(getClass().getResource("mixins/member-apply-other-namespace.smithy").toURI()));
+        // Should be able to load when you have multiple identical apply statements to the same mixed in member.
+        // See https://github.com/smithy-lang/smithy/issues/2004
+        Model.assembler()
+                .addUnparsedModel("mixed-member.smithy", modelToApplyTo)
+                .addUnparsedModel("member-apply-1.smithy", modelWithApply)
+                .addUnparsedModel("member-apply-2.smithy", modelWithApply)
+                .assemble()
+                .unwrap();
+    }
 }
diff --git a/smithy-model/src/test/resources/software/amazon/smithy/model/loader/mixins/apply-to-mixed-member.json b/smithy-model/src/test/resources/software/amazon/smithy/model/loader/mixins/apply-to-mixed-member.json
new file mode 100644
index 00000000000..544456e8be3
--- /dev/null
+++ b/smithy-model/src/test/resources/software/amazon/smithy/model/loader/mixins/apply-to-mixed-member.json
@@ -0,0 +1,34 @@
+{
+    "smithy": "2.0",
+    "shapes": {
+        "com.example#Common": {
+            "type": "structure",
+            "members": {
+                "description": {
+                    "target": "smithy.api#String",
+                    "traits": {
+                        "smithy.api#required": {}
+                    }
+                }
+            },
+            "traits": {
+                "smithy.api#mixin": {}
+            }
+        },
+        "com.example#Thing": {
+            "type": "structure",
+            "mixins": [
+                {
+                    "target": "com.example#Common"
+                }
+            ],
+            "members": {}
+        },
+        "com.example#Thing$description": {
+            "type": "apply",
+            "traits": {
+                "smithy.api#default": "test"
+            }
+        }
+    }
+}
diff --git a/smithy-model/src/test/resources/software/amazon/smithy/model/loader/mixins/member-apply-other-namespace.smithy b/smithy-model/src/test/resources/software/amazon/smithy/model/loader/mixins/member-apply-other-namespace.smithy
new file mode 100644
index 00000000000..faad3a6ecc6
--- /dev/null
+++ b/smithy-model/src/test/resources/software/amazon/smithy/model/loader/mixins/member-apply-other-namespace.smithy
@@ -0,0 +1,7 @@
+$version: "2.0"
+
+namespace com.example.other
+
+use com.example#Thing
+
+apply Thing$description @default("test")
diff --git a/smithy-model/src/test/resources/software/amazon/smithy/model/loader/mixins/mixed-member.smithy b/smithy-model/src/test/resources/software/amazon/smithy/model/loader/mixins/mixed-member.smithy
new file mode 100644
index 00000000000..864ee0b064f
--- /dev/null
+++ b/smithy-model/src/test/resources/software/amazon/smithy/model/loader/mixins/mixed-member.smithy
@@ -0,0 +1,11 @@
+$version: "2.0"
+
+namespace com.example
+
+@mixin
+structure Common {
+    @required
+    description: String
+}
+
+structure Thing with [Common] {}