.gitignore

# OSX stuff
*.DS_Store

# Archivers
**/*.tar.gz
# -------------------------- Python -------------------------- #

# Jupyter Notebook checkpoints
*-checkpoint.ipynb

# Byte-compiled / optimized / DLL files
__pycache__/
*.py[cod]
*$py.class

# Temp
*~

# C extensions
*.so

# Distribution / packaging
.Python
env/
build/
develop-eggs/
dist/
downloads/
eggs/
.eggs/
lib/
lib64/
parts/
sdist/
var/
*.egg-info/
.installed.cfg
*.egg
# Numpy files
#*.npy

# Dump files
*.pkl

# Images
*.png
!*adenine_logo.png
!icon.png


# PyInstaller
#  Usually these files are written by a python script from a template
#  before PyInstaller builds the exe, so as to inject date/other infos into it.
*.manifest
*.spec

# Installer logs
pip-log.txt
pip-delete-this-directory.txt

# Unit test / coverage reports
htmlcov/
.tox/
.coverage
.coverage.*
.cache
nosetests.xml
coverage.xml
*,cover

# Translations
*.mo
*.pot

# Django stuff:
*.log

# Sphinx documentation
docs/_build/

# PyBuilder
target/

# -------------------------- TeX -------------------------- #

*.aux
*.glo
*.idx
*.log
*.toc
*.ist
*.acn
*.acr
*.alg
*.bbl
*.blg
*.dvi
*.glg
*.gls
*.ilg
*.ind
*.lof
*.lot
*.maf
*.mtc
*.mtc1
*.out
*.synctex.gz 

# -------------------------- results -------------------------- #
**/results/**/*

# --- LaTeX --- #
## Core latex/pdflatex auxiliary files:
*.aux
*.lof
*.log
*.lot
**.fls
*.out
*.toc
*.fmt
*.fot
*.cb
*.cb2

## Intermediate documents:
*.dvi
*-converted-to.*
# these rules might exclude image files for figures etc.
# *.ps
# *.eps
#*.pdf


## Bibliography auxiliary files (bibtex/biblatex/biber):
*.bbl
*.bcf
*.blg
*-blx.aux
*-blx.bib
*.brf
*.run.xml

## Build tool auxiliary files:
*.fdb_latexmk
.synctex
.synctex.gz
.synctex.gz(busy)
*.pdfsync

## Auxiliary and intermediate files from other packages:
# algorithms
*.alg
*.loa

# achemso
acs-*.bib

# amsthm
*.thm

# beamer
*.nav
*.snm
*.vrb

# cprotect
*.cpt

# fixme
*.lox

#(r)(e)ledmac/(r)(e)ledpar
*.end
*.?end
*.[1-9]
*.[1-9][0-9]
*.[1-9][0-9][0-9]
*.[1-9]R
*.[1-9][0-9]R
*.[1-9][0-9][0-9]R
*.eledsec[1-9]
*.eledsec[1-9]R
*.eledsec[1-9][0-9]
*.eledsec[1-9][0-9]R
*.eledsec[1-9][0-9][0-9]
*.eledsec[1-9][0-9][0-9]R

# glossaries
*.acn
*.acr
*.glg
*.glo
*.gls
*.glsdefs

# gnuplottex
*-gnuplottex-*

# hyperref
*.brf

# knitr
*-concordance.tex
# TODO Comment the next line if you want to keep your tikz graphics files
*.tikz
*-tikzDictionary

# listings
*.lol

# makeidx
*.idx
*.ilg
*.ind
*.ist

# minitoc
*.maf
*.mlf
*.mlt
*.mtc
*.mtc[0-9]
*.mtc[1-9][0-9]

# minted
_minted*
*.pyg

# morewrites
*.mw

# mylatexformat
*.fmt

# nomencl
*.nlo

# sagetex
*.sagetex.sage
*.sagetex.py
*.sagetex.scmd

# sympy
*.sout
*.sympy
sympy-plots-for-*.tex/

# pdfcomment
*.upa
*.upb

# pythontex
*.pytxcode
pythontex-files-*/

# thmtools
*.loe

# TikZ & PGF
*.dpth
*.md5
*.auxlock

# todonotes
*.tdo

# xindy
*.xdy

# xypic precompiled matrices
*.xyc

# endfloat
*.ttt
*.fff

# Latexian
TSWLatexianTemp*

## Editors:
# WinEdt
*.bak
*.sav

# Texpad
.texpadtmp

# Kile
*.backup

# KBibTeX
*~[0-9]*