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[tracker] Windows-native TileDB-SOMA #1360

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daweibushen opened this issue May 10, 2023 · 9 comments · Fixed by #1811
Closed

[tracker] Windows-native TileDB-SOMA #1360

daweibushen opened this issue May 10, 2023 · 9 comments · Fixed by #1811
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blocked enhancement New feature or request windows

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@daweibushen
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daweibushen commented May 10, 2023

Describe the bug

pip install tiledbsoma
Building wheels for collected packages: tiledbsoma
  Building wheel for tiledbsoma (pyproject.toml): started
  Building wheel for tiledbsoma (pyproject.toml): finished with status 'error'
Failed to build tiledbsoma
Note: you may need to restart the kernel to use updated packages.
  error: subprocess-exited-with-error
  
  Building wheel for tiledbsoma (pyproject.toml) did not run successfully.
  exit code: 1
  
  [5 lines of output]
  running bdist_wheel
  Checking: C:\Users\dawei bushen\AppData\Local\Temp\pip-install-725ip_cc\tiledbsoma_ce59cb0207fe481d9e0f336d8115e3fb\dist_links\dist\lib\tiledbsoma.dll exists: False
  Checking: C:\Users\dawei bushen\AppData\Local\Temp\pip-install-725ip_cc\tiledbsoma_ce59cb0207fe481d9e0f336d8115e3fb\dist_links\dist\bin\tiledbsoma.dll exists: False
  Could not find module 'tiledbsoma.dll' (or one of its dependencies). Try using the full path with constructor syntax.
  error: [WinError 2] 系统找不到指定的文件。
  [end of output]
  
  note: This error originates from a subprocess, and is likely not a problem with pip.
  ERROR: Failed building wheel for tiledbsoma
ERROR: Could not build wheels for tiledbsoma, which is required to install pyproject.toml-based projects

To Reproduce
Provide a code example and any sample input data (e.g. an H5AD) as an attachment to reproduce this behavior.

Versions (please complete the following information):
Python 3.10.9 | packaged by Anaconda, Inc. | (main, Mar 1 2023, 18:18:15) [MSC v.1916 64 bit (AMD64)]
Windows-10-10.0.19045-SP0

Additional context
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@daweibushen
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anyone help? I tried many version of tiledbsoma, but all the same error

@johnkerl johnkerl added bug Something isn't working windows labels May 10, 2023
@johnkerl
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@daweibushen thanks for reporting!

Our Windows install is indeed a work in progress, so this is not particular to your own install.

@johnkerl johnkerl added enhancement New feature or request and removed bug Something isn't working labels May 10, 2023
@daweibushen
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Thank you very much for reply,do you mean tiledbsoma will work in wondows oneday?

@johnkerl
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Yes it will! :)

@daweibushen
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looking forward

@Sirik98
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Sirik98 commented Sep 29, 2023

Hi All,

The error still persists,Please help with the work around., Trying to install tiledbsoma in windows with python.

Could not find module 'tiledbsoma.dll' (or one of its dependencies). Try using the full path with constructor syntax.
error: [WinError 2] The system cannot find the file specified
[end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for tiledbsoma
Failed to build tiledbsoma
ERROR: Could not build wheels for tiledbsoma, which is required to install pyproject.toml-based projects

@johnkerl
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@Sirik98 thank you for the feedback! I can leave this open (and should have).

Meanwhile Windows support for TileDB-SOMA is not currently available, but is on our roadmap.

@johnkerl johnkerl reopened this Sep 29, 2023
@johnkerl johnkerl changed the title [Bug] Could not find module 'tiledbsoma.dll' (or one of its dependencies). Try using the full path with constructor syntax. Windows-native TileDB-SOMA [tracking issue] Sep 29, 2023
@Koncopd
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Koncopd commented Oct 16, 2023

Works on WSL, but would be really great to have a native build for Windows.

@johnkerl johnkerl changed the title Windows-native TileDB-SOMA [tracking issue] [tracker] Windows-native TileDB-SOMA Nov 7, 2023
@johnkerl
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See also #2631

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4 participants