Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Support value filters in NDArray read operations #148

Open
atolopko-czi opened this issue Mar 3, 2023 · 0 comments
Open

Support value filters in NDArray read operations #148

atolopko-czi opened this issue Mar 3, 2023 · 0 comments

Comments

@atolopko-czi
Copy link
Member

Created issue as follow-up to a removed "TODO" in the abstract spec, per single-cell-data/TileDB-SOMA#834 (comment).

Value filter support in NDArray has been proposed:

  • Is there a use case to motivate it?
  • This effectively requires that all read() return batches be sparse, as the value filter will remove values.
  • Where the requested batch_format is dense (i.e., the user wants a tensor back), this would require that we also provide coordinates and/or a mask in addition to the tensor (values). Or disallow that combination: if you specify a value filter, you can only ask for a sparse-capable batch_format.
@johnkerl johnkerl changed the title Support value filters in NDArray read operations Support value filters in NDArray read operations Mar 15, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant