- Review of methods and introduction to the Grinn R package (predecessor to Metabobox)
- see Metabolomics Notes
- github repo
- has a Name-ID converter
- Example data and analysis details
- Correlation Network
- "3Omics generates inter-omic correlation network to display the relationship or common patterns in data over time or experimental conditions for all transcripts, proteins and metabolites. Where users may only have two of the three -omics data-sets, 3Omics supplements the missing transcript, protein or metabolite information by searching iHOP"
- Coexpression Profile
- Phenotype Analysis
- Pathway Analysis
- GO Enrichment Analysis