title | authors | authorLinks | affiliations | translators | translatorLinks | date | dataset | abstract | ||||||||||||||||||
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新型冠状病毒(COVID-19)传播情况的基因组学分析:状况报告 2020-03-27. |
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Fred Hutch, Seattle, USA; Biozentrum, Basel, Switzerland; CZI, CA, USA |
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2020 March 27 |
这份报告使用了公开共享的2019新型冠状病毒(COVID-19)基因组数据来追踪疫情的传播,此报告将每周更新。 |
# 报告摘要
我们分析了1495个公开共享的COVID-19基因组。通过将这些病毒基因组相互比较,我们可以描述COVID-19是如何在世界各地迁移和在社区中传播的。在本周的更新中,我们发现:
**欧洲**
* 我们继续看到欧洲各地的样本大量混杂在一起,意味着病毒在过去的3-5周中仍在跨境传播。随着疫情控制措施慢慢生效,我们可能会看到病例越来越多地根据所在国家聚类在一起。
**北美洲**
* 美国境内的传播情况很复杂:在美国的两端采集到的样本的亲缘关系仍然很近。
* 华盛顿州至少经历了两起独立的输入事件(第一起可能来自中国,第二起可能来自欧洲),这两起事件引发了两个不同的传播链。
* 证据表明,美国多个州内很可能已存在社区传播,其中加利福尼亚州的证据最为明显。
**中美洲和南美洲**
* 我们这周得到了来自南美洲的新序列,但是该地区的样本仍然稀缺。除了已有数据所表征的疫情之外,这个地区可能有更广泛的疫情存在,但我们不能确定。
**亚洲**
* 我们发现了近期有从伊朗输出的病例的证据。
**非洲**
* 系统发生树表明,在过去的11天或更长时间里,刚果民主共和国的金沙萨市内很有可能发生了社区传播。
* 我们这周得到了来自非洲的新序列,但是该地区的样本仍然稀缺。除了已有数据所表征的疫情之外,可能有广泛得多的疫情存在。
**大洋洲**
* 遗传数据表明,澳大利亚的新南威尔士州内存在社区传播。
我们准备了一些值得一读的材料,让您了解COVID-19(2019冠状病毒病)及其致病病毒SARS-CoV-2(严重急性呼吸综合征冠状病毒2型)。这些资料将使您更容易理解我们在本报告中提供的数据。
如果您不熟悉系统发生树,我们建议先阅读如何解读系统发生树,并在阅读后再回到此页。
## Nextstrain的资料
[如何解读系统发生树](https://nextstrain.org/narratives/trees-background/zh).
[冠状病毒的背景知识(英文)](https://nextstrain.org/help/coronavirus/human-CoV).
[近期COVID-19疫情的背景(英文)](https://nextstrain.org/help/coronavirus/SARS-CoV-2).
[常见问题(英文)](https://nextstrain.org/help/coronavirus/FAQ).
[常见误区](https://nextstrain.org/narratives/ncov/sit-rep/zh/2020-03-13?n=11).
## 外部资料
[WHO的状况报告(英文)](https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports).
[美国CDC的资料(英文)](https://www.cdc.gov/coronavirus/2019-ncov/index.html).
[纽约时报对COVID-19的报道(英文)](https://www.nytimes.com/news-event/coronavirus).
[数据中的世界(Our World in Data)(英文)](https://ourworldindata.org/coronavirus).
[向科学家提问&常见问题解答(英文)](https://covid19.fas.org/l/en).
我们目前有来自6大洲48个国家的病毒样本序列。这是一项令人难以置信的壮举--在病毒大流行期间对一种未知的大型RNA病毒进行测序是很困难的,只有通过世界各地的科学家和医生令人难以置信的工作和及时共享数据才有可能。
虽然这些数据使我们能够推断出这场疫情的许多有用的特征并实时跟踪其传播,但需要强调的是,我们的结论受到现有数据的限制。
比如,地图上显示来自南半球的序列很少。这既不是因为COVID-19没有在这些地区传播,也不是因为理解这些病例不重要,而仅仅是因为我们没有从这些地区获得足够的数据。地图上每个圆圈的大小表示的是该区域当前有多少数据可用,而不是疫情的真实严重程度。
这里,我们显示过去三周内在欧洲采集到的样本,用颜色表示样本所采集自的国家。
可以注意到,虽然有一些来自于同一国家的序列聚成小簇,但是也有来自不同国家的样本大量地混杂在一起。
这意味着在过去的3-5周内,病毒仍持续跨境传播。
随着最近限制跨境旅行的防疫措施的推行,病毒序列按照地理位置聚类的现象可能会变得更明显。
我们得到了大量来自冰岛的新序列。 通过将样本按照(已知的)旅行史着色,我们可以看到很多病例是近期旅行所致。我们正在努力分析这些新数据,将在下周报告我们的发现。
即使只看美国境内,病毒的传播情况也是高度复杂的。
举例来说,康涅狄格州的最近的样本(图中的已选样本)中,既有华盛顿州的样本(图中的虚化样本)的祖先型,也有与华盛顿州样本混杂排列的。
虽然我们需要更多的数据来得出确凿的结论,但这暗示着即使是美国国内相距甚远的两个地方,近期也发生了病毒的传播。
这凸显出美国国内的传播情况比现有数据所能代表的要复杂得多。
更多的数据可以帮助我们理解,在美国各州高度差异化的应对策略之下,这场深度连接着美国各地的疫情将会如何发展。
在华盛顿州的病例中,我们看到至少两起本地的疫情传播(序列聚成至少两簇)。
然而,这两簇序列有着不同的起源:第一簇与中国的样本亲缘关系最近,第二簇与欧洲的样本最近。这些输入事件也有可能是间接的,经由位于其他地区的未被抽样到的病例传播。
我们在美国的其他地区也看到类似的情况。
这里,我们看到加州北部的索兰诺郡的几个样本,它们采集于不同的日期,但序列的亲缘关系很近。
虽然加州的现有数据还太有限,不足以让我们得出有力的结论,但是这些证据初步表明索兰诺郡内存在本地传播。
在树的其他地方可以看到,来自圣克拉拉郡的样本之间也存在类似的关系。
根据树上的相对位置,可以看出这两个郡的聚集病例可能来自于不同的输入事件。
我们目前还没有很多来自南美洲的基因组序列数据。在现有的数据中,大部分是来自旅行者。这里,样本的颜色代表了病例的已知旅行史。
虽然在与旅行无关的病例中也开始出现一些有可能有意义的现象,但我们目前还没有足够的证据来得出任何结论。
现在测序量正在提高中,我们会在形势明朗后再来报告。
我们目前没有伊朗本土的病毒基因组序列,
但我们有许多有伊朗旅行史的样本序列。
大多数有伊朗旅行史的样本序列聚集到了一起,这暗示了很多伊朗病例是由单次的输入事件所导致的爆发。
在树的根部,我们发现一条新的来自巴基斯坦的序列,该序列来自一位有伊朗旅行史的女性。
值得注意的是,这条序列是其他已知伊朗序列的外类群,但是从时间上来看,这一条与其他的样本是在差不多的时候被取样的。
这个现象可以由多种不同的假说来解释。如果后期获取得更多数据,我们将进一步更新我们的分析。
来自刚果民主共和国的金沙萨市的新序列表明了该地有多起独立的输入传染事件。
其中一些在数日之内采集到的样本聚成了一个紧密相关的本地基因簇。
这反映出当地的本地传播至少从3月15日起就开始了(3月15日是属于这个本地传播链中的样本最早被采集到的日期),还可能更早。
INRB(刚果国立生物医学研究所)对早期样本的出色的测序工作,使得我们能够在这里看到在许多其他地方未被察觉到的社区传播。
澳大利亚的新序列显示了新南威尔士州本地传播的证据。 这些证据表明,病毒很有可能至少从二月底开始就在当地形成传播。
- 保持严格的社交距离,风险人群尤其要这样做。
- 请记住,即使你不属于高风险人群,你周围的许多人也可能属于高危人群;遵循以上做法可以保护他人。
- 仔细洗手,要像“刚切完辣椒但是要换隐形眼镜”时一样洗手。
- 生病时留在家里,特别当你身体状况不佳时;准备一些额外的补给,以备自我隔离。
- 如果你是雇主,请尽可能地鼓励员工在家办公。
- 推广免费检测。
- 推行减少社交接触的措施。
- 资助和建立有效广泛的病例追踪体系。
- 在经济上支持受到上述措施影响的人。
## 总结
#### 接下来的几周内,我们将会观察欧洲疫情,看新的防疫决策是否能够阻碍跨境传播。
<br><br>
#### 我们也会监控南美的疫情,如果获得更多序列,我们就能找出是否已存在更多本地传播的迹象。
<br><br>
#### 美国的疫情应该是一个非常复杂的传播体系,既有国际输入的病例,也发现了在极远的地区之间的传播。在华盛顿州和加利福尼亚州,我们发现了多重本地传播链的证据。
<br><br>
#### 我们发现澳大利亚新南威尔士州存在本地传播。
<br><br>
#### 刚果民主共和国的金莎萨市也存在本地传播。目前我们还没有足够数据判断在非洲其他地区,病毒是否已经在当地传播开来。
我们要感谢参与此次疫情的所有科学家所做的令人惊叹和及时的工作,特别是那些在中国工作的科学家。 只有通过基因组数据和元数据的快速共享,才有可能进行这样的分析。
我们也感谢GISAID提供了上传和共享这些数据的平台。
非常感谢以下单位机构和实验室慷慨分享:
* Andersen Lab, The Scripps Research Institute
* Arizona Department of Health Services
* Auckland Hospital
* BCCDC Public Health Laboratory
* Bamrasnaradura Hospital
* Beijing Institute of Microbiology and Epidemiology
* Bundeswehr Institute of Microbiology
* CH Jean de Navarre Laboratoire de Biologie
* CHRU Pontchaillou - Laboratoire de Virologie
* CHU Gabriel Montpied
* CNR Virus des Infections Respiratoires - France SUD
* COMPLEJO ASISTENCIAL UNIVERSITARIO DE BURGOS
* CR&WISCO GENERAL HOSPITAL
* California Department of Health
* California Department of Public Health
* Center of Medical Microbiology, Virology, and Hospital Hygiene, University of Duesseldorf
* Centers for Disease Control, R.O.C. (Taiwan)
* Centre Hositalier Universitaire de Rouen Laboratoire de Virologie
* Centre Hospitalier Compiegne Laboratoire de Biologie
* Centre Hospitalier Regional Universitaire de Nantes Laboratoire de Virologie
* Centre Hospitalier Rene Dubois Laboratoire de Microbiologie - Bat A
* Centre Hospitalier de Bourg en Bresse
* Centre Hospitalier de Macon
* Centre Hospitalier de Valence
* Centre for Human and Zoonotic Virology (CHAZVY), College of Medicine University of Lagos/Lagos University Teaching Hospital (LUTH), part of the Laboratory Network of the Nigeria Centre for Disease Control (NCDC)
* Centre for Infectious Diseases and Microbiology - Public Health
* Centre for Infectious Diseases and Microbiology Laboratory Services
* Centre for Infectious Diseases and Microbiology Public Health
* Centre for Infectious Diseases and Microbiology- Public Health
* Centro Hospital do Porto, E.P.E. - H. Geral de Santo Antonio
* Centro Hospitalar e Universitario de Sao Joao, Porto
* Charite Universitatsmedizin Berlin, Institute of Virology; Institut fur Mikrobiologie der Bundeswehr, Munich
* Chiu Laboratory, University of California, San Francisco
* Clinica Alemana de Santiago, Chile
* Clinica Santa Maria, Santiago, Chile
* Clinical Microbiology Lab
* Connecticut State Department of Public Health
* Dasman Diabetes Institute
* Dasman Diabetes Institute and Virology Laboratory Ministry of Health
* Department of Clinical Microbiology
* Department of Clinical Pathology, Pamela Youde Nethersole Eastern Hospital
* Department of Infectious Diseases, Istituto Superiore di Sanita, Roma , Italy
* Department of Infectious Diseases, Istituto Superiore di Sanita, Rome, Italy
* Department of Infectious and Tropical Diseases, Bichat Claude Bernard Hospital, Paris
* Department of Internal Medicine, Triemli Hospital
* Department of Laboratory Medicine, National Taiwan University Hospital
* Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China
* Department of Microbiology, Institute for Viral Diseases, College of Medicine, Korea University
* Department of Pathology, Princess Margaret Hospital
* Department of Pathology, Toshima Hospital
* Department of Pathology, United Christian Hospital
* Department of Virology III, National Institute of Infectious Diseases
* Department of Virology and Immunology, University of Helsinki and Helsinki University Hospital, Huslab Finland
* Department of Virus and Microbiological Special diagnostics, Statens Serum Institut, Copenhagen, Denmark.
* Department of microbiology laboratory,Anhui Provincial Center for Disease Control and Prevention
* Dept. of Pathology, National Institute of Infectious Diseases
* Dept. of Virology III, National Institute of Infectious Diseases
* Dienst Gezondheid & Jeugd Zuid-Holland Zuid
* Division of Infectious Diseases, Department of Internal Medicine, Korea University College of Medicine
* Division of Infectious Diseases, University Hospital Zurich
* Division of Viral Diseases, Center for Laboratory Control of Infectious Diseases, Korea Centers for Diseases Control and Prevention
* Dunedin Hospital
* Dutch COVID-19 response team
* ErasmusMC
* FUNDACION JIMENEZ DIAZ
* Foundation Elisabeth-Tweesteden Ziekenhuis
* Foundation Pamm
* Fujian Center for Disease Control and Prevention
* General Hospital of Central Theater Command of People's Liberation Army of China
* Gorgas Memorial Institute for Health Studies
* Guangdong Provincial Center for Diseases Control and Prevention; Guangdong Provincial Public Health
* Guangdong Provincial Center for Diseases Control and Prevention; Guangdong Provinical Public Health
* Guangdong Provincial Center for Diseases Control and Prevention;Guangdong Provincial Institute of Public Health
* Guangdong Provincial Institution of Public Health, Guangdong Provinical Center for Disease Control and Prevention
* HOSPITAL SANTA MARIA NAI
* HUS Diagnostiikkakeskus, Hallinto
* Hangzhou Center for Disease Control and Prevention
* Hangzhou Center for Disease and Control Microbiology Lab
* Harborview Medical Center
* Hong Kong Department of Health
* Hopital Instruction des Armees - BEGIN
* Hopital Robert Debre Laboratoire de Virologie
* Hopital franco britannique - Service des Urgences
* Hopitaux universitaires de Geneve Laboratoire de Virologie
* Hospital Israelita Albert Einstein
* Hospital Sao Joaquim Beneficencia Portuguesa
* Hospital de Talca, Chile
* IL Department of Public Health Chicago Laboratory
* INMI Lazzaro Spallanzani IRCCS
* Indian Council of Medical Research - National Institute of Virology
* Indian Council of Medical Research-National Institute of Virology
* Institut Medico legal- Hop R. Poincare
* Institut des Agents Infectieux (IAI) Hospices Civils de Lyon
* Institut des Agents Infectieux (IAI), Hospices Civils de Lyon
* Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College
* Institute of Viral Disease Control and Prevention, China CDC
* Instituto Nacional de Enfermedades Respiratorias
* Japanese Quarantine Stations
* Jiangxi province Center for Disease Control and Prevention
* Jingzhou Center for Disease Control and Prevention
* KU Leuven, Clincal and Epidemiological Virology
* KU Leuven, Clinical and Epidemiological Virology
* Klinik Hirslanden Zurich
* Korea Centers for Disease Control & Prevention (KCDC) Center for Laboratory Control of Infectious Diseases Division of Viral Diseases
* LABM GH nord Essonne
* LACEN RJ - Laboratorio Central de Saude Publica Noel Nutels
* LACEN/ES - Laboratorio Central de Saude Publica do Espirito Santo
* Laboiratorio Fleury
* Laboratoire National de Sante
* Laboratoire de Virologie Institut de Virologie - INSERM U 1109 Hopitaux Universitaires de Strasbourg
* Laboratoire de Virologie, HUG
* Laboratorio Central de Saude Publica Professor Goncalo Moniz LACEN/BA
* Laboratorio de Ecologia de Doencas Transmissiveis na Amazonia, Instituto Leonidas e Maria Deane - Fiocruz Amazonia
* Laboratorio de Referencia Nacional de Virus Respiratorio. Instituto Nacional de Salud. Peru
* Laboratorio de Referencia Nacional de Virus Respiratorios. Instituto Nacional de Salud Peru
* Laboratorio di Microbiologia e Virologia, Universita Vita-Salute San Raffaele, Milano
* Laboratory Medicine
* Laboratory of Molecular Virology International Center for Genetic Engineering and Biotechnology (ICGEB)
* Laboratory of Molecular Virology International Center fro Genetic Engineering and Biotechnology (ICGEB)
* Laboratory of Molecular Virology, Pontificia Universidad Catolica de Chile
* Lapland Central Hospital
* MHC Brabant Zuidoost
* MHC Drente
* MHC Flevoland
* MHC Gooi & Vechtstreek
* MHC Haaglanden
* MHC Hart voor Brabant
* MHC Kennemerland
* MHC Rotterdam-Rijnmond
* MHC Utrecht
* MHC West-Brabant
* MSHS Clinical Microbiology Laboratories
* Massachusetts Department of Public Health
* Minnesota Department of Health, Public Health Laboratory
* Monash Medical Centre
* NHC Key laboratory of Enteric Pathogenic Microbiology, Institute of Pathogenic Microbiology
* NRL for Influenza, Centrum Epidemiology and Microbiology of National Institute of Public Health, Czech Republic
* NYU Langone Health
* National Centre for Infectious Diseases
* National Influenza Center - Instituto Adolfo Lutz
* National Influenza Center - National Institute of Hygiene and Epidemiology (NIHE)
* National Influenza Center, National Institute of Hygiene and Epidemiology (NIHE)
* National Influenza Centre, National Public Health Laboratory, Kathmandu, Nepal
* National Institute for Communicable Diseases of the National Health Laboratory Service
* National Institute for Viral Disease Control and Prevention, China CDC
* National Public Health Laboratory
* National Public Health Laboratory, National Centre for Infectious Diseases
* National Public Health Surveillance Laboratory, Vilnius, Lithuania
* Pathology Queensland
* Prince of Wales Hospital
* Providence Regional Medical Center
* Public Health Laboratory
* Public Health Laboratory, Saudi CDC
* Public Health Ontario Laboratory
* R. G. Lugar Center for Public Health Research, National Center for Disease Control and Public Health (NCDC) of Georgia.
* RIVM
* Regional Virus Laboratory, Belfast
* Respiratory Virus Unit, Microbiology Services Colindale, Public Health England
* Rockhampton Base Hospital
* Saitama Medical University
* Saitama Medical University Hospital
* Santa Clara County Public Health Department
* Seattle Flu Study
* Second Hospital of Anhui Medical University
* Serology, Virology and OTDS Laboratories (SAViD), NSW Health Pathology Randwick
* Servicio Microbiologia, Hospital Clinico Universitario, Valencia
* Servicio Microbiologia. Hospital Clinico Universitario. Valencia.
* Servicio de Microbiologia. Consorcio Hospital General Universitario de Valencia
* Shandong Provincial Center for Disease Control and Prevention
* Shanghai Public Health Clinical Center, Shanghai Medical College, Fudan University
* Shenzhen Key Laboratory of Pathogen and Immunity, National Clinical Research Center for Infectious Disease, Shenzhen Third People's Hospital
* Shenzhen Third People's Hospital
* Singapore General Hospital
* Singapore General Hospital, Molecular Laboratory, Division of Pathology
* Sorbonne Universite, Inserm et Assistance Publique-Hopitaux de Paris (Pitie Salpetriere)
* South China Agricultural University
* State Health Office Baden-Wuerttemberg
* State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China 310003
* State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China. 310003
* State Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, the First Affiliated Hospital of Guangzhou Medical University
* Sullivan Nicolaides Pathology
* Tai Lung Veterinary Laboratory, Agriculture, Fisheries and Conservation Department
* Taiwan Centers for Disease Control
* Texas Department of State Health Services
* The Central Hospital Of Wuhan
* The National Institute of Public Health Center for Epidemiology and Microbiology
* The University of Hong Kong - Shenzhen Hospital
* Tianmen Center for Disease Control and Prevention
* UCD National Virus Reference Laboratory
* UW Virology Lab
* Union Hospital of Tongji Medical College, Huazhong University of Science and Technology
* University of Wisconsin-Madison AIDS Vaccine Research Laboratories
* University of Wisconsin-Madison AIDS Vaccine Research Laboratory
* Unknown
* Utah Public Health Laboratory
* Valley Medical Center
* Victorian Infectious Diseases Reference Laboratory (VIDRL)
* Viral Respiratory Lab, National Institute for Biomedical Research (INRB)
* ViroGenetics - BSL3 Laboratory of Virology; Human Genome Variation Research Group & Genomics Centre MCB; Bioinformatics Research Group Department of Virology
* Virological Research Group, Szentagothai Research Centre
* Virological Research Group, Szentagothai Research Centre, University of Pecs
* Virology Department, Royal Infirmary of Edinburgh, NHS Lothian
* Virology Department, Sheffield Teaching Hospitals NHS Foundation Trust
* Virology Unit, Institut Pasteur du Cambodge.
* Virology laboratory Ministry of Health Kuwait sequenced at Dasman Diabetes Institute
* WA State Department of Health
* WHO National Influenza Centre Russian Federation
* Wales Specialist Virology Centre
* Washington State Department of Health
* Washington State Public Health Lab
* Weifang Center for Disease Control and Prevention
* Wellington Hospital
* West of Scotland Specialist Virology Centre, NHSGGC
* Wisconsin Department of Health Services
* Wuhan Fourth Hospital
* Wuhan Institute of Virology, Chinese Academy of Sciences
* Wuhan Jinyintan Hospital
* Wuhan Lung Hospital
* Yale Clinical Virology Laboratory
* Yongchuan District Center for Disease Control and Prevention
* Zhejiang Provincial Center for Disease Control and Prevention
* Zhongxian Center for Disease Control and Prevention
所有数据已被共享至GISAID数据库。 我们感谢各位科学家的慷慨分享。
在右边,我们列出了每个实验室共享的序列。
感谢下列实验室里科学家们慷慨分享SARS-CoV-2的基因组:
* Andersen Lab, The Scripps Research Institute
* USA/CA-MG0987/2020
* USA/CA-PC101P/2020
* Arizona Department of Health Services
* USA/AZ1/2020
* Auckland Hospital
* NewZealand/01/2020
* NewZealand/20VR0189/2020
* NewZealand/20VR019/2020
* NewZealand/20VR0206/2020
* BCCDC Public Health Laboratory
* Canada/BC_02421/2020
* Canada/BC_13297/2020
* Canada/BC_17397/2020
* Canada/BC_25211/2020
* Canada/BC_35720/2020
* Canada/BC_37_0-2/2020
* Canada/BC_40860/2020
* Canada/BC_41851/2020
* Canada/BC_64686/2020
* Canada/BC_65034/2020
* Canada/BC_66353/2020
* Canada/BC_69243/2020
* Canada/BC_78548/2020
* Canada/BC_83109/2020
* Canada/BC_83163/2020
* Bamrasnaradura Hospital
* Nonthaburi/61/2020
* Nonthaburi/74/2020
* Beijing Institute of Microbiology and Epidemiology
* pangolin/Guangdong/P2S/2019
* pangolin/Guangxi/P1E/2017
* pangolin/Guangxi/P2V/2017
* pangolin/Guangxi/P3B/2017
* pangolin/Guangxi/P4L/2017
* pangolin/Guangxi/P5E/2017
* pangolin/Guangxi/P5L/2017
* Bundeswehr Institute of Microbiology
* Germany/BavPat2/2020
* Germany/BavPat3/2020
* CH Jean de Navarre Laboratoire de Biologie
* France/HF2196/2020
* CHRU Pontchaillou - Laboratoire de Virologie
* France/B2330/2020
* France/B2334/2020
* France/B2335/2020
* France/B2336/2020
* France/B2337/2020
* France/B2340/2020
* France/B2343/2020
* France/B2344/2020
* France/B2346/2020
* France/B2348/2020
* France/B2349/2020
* France/B2351/2020
* CHU Gabriel Montpied
* France/Clermont-Ferrand_650/2020
* France/Clermont-Ferrand_651/2020
* CNR Virus des Infections Respiratoires - France SUD
* France/Pollionay_1733/2020
* France/RA739/2020
* France/Valence_425/2020
* COMPLEJO ASISTENCIAL UNIVERSITARIO DE BURGOS
* Spain/CastillayLeon201437/2020
* CR&WISCO GENERAL HOSPITAL
* Wuhan/HBCDC-HB-05/2020
* California Department of Health
* USA/CA3/2020
* USA/CA4/2020
* USA/CA5/2020
* California Department of Public Health
* USA/CA-CDPH-UC1/2020
* USA/CA-CDPH-UC18/2020
* USA/CA-CDPH-UC19/2020
* USA/CA-CDPH-UC2/2020
* USA/CA-CDPH-UC20/2020
* USA/CA-CDPH-UC21/2020
* USA/CA-CDPH-UC22/2020
* USA/CA-CDPH-UC23/2020
* USA/CA-CDPH-UC24/2020
* USA/CA-CDPH-UC25/2020
* USA/CA-CDPH-UC3/2020
* USA/CA-CDPH-UC4/2020
* USA/CA-CDPH-UC5/2020
* USA/CA-CDPH-UC6/2020
* USA/CA-CDPH-UC7/2020
* USA/CA-CDPH-UC8/2020
* USA/CA-CDPH-UC9/2020
* USA/CA1/2020
* USA/CA2/2020
* USA/CA6/2020
* USA/CA7/2020
* USA/CA8/2020
* USA/CA9/2020
* USA/UC-CDPH-UC11/2020
* Center of Medical Microbiology, Virology, and Hospital Hygiene, University of Duesseldorf
* Germany/NRW-01/2020
* Germany/NRW-011/2020
* Germany/NRW-02-1/2020
* Germany/NRW-03/2020
* Germany/NRW-04/2020
* Germany/NRW-05/2020
* Germany/NRW-06/2020
* Germany/NRW-07/2020
* Germany/NRW-08/2020
* Germany/NRW-09/2020
* Germany/NRW-10/2020
* Centers for Disease Control, R.O.C. (Taiwan)
* Taiwan/2/2020
* Centre Hositalier Universitaire de Rouen Laboratoire de Virologie
* France/N1620/2020
* France/N2223/2020
* Centre Hospitalier Compiegne Laboratoire de Biologie
* France/HF1795/2020
* France/HF1805/2020
* France/HF1870/2020
* France/HF1871/2020
* France/HF1986/2020
* France/HF1988/2020
* France/HF1989/2020
* France/HF1993/2020
* France/HF1995/2020
* France/HF2151/2020
* France/HF2174/2020
* France/HF2234/2020
* France/HF2237/2020
* France/HF2239/2020
* Centre Hospitalier Regional Universitaire de Nantes Laboratoire de Virologie
* France/PL1643/2020
* Centre Hospitalier Rene Dubois Laboratoire de Microbiologie - Bat A
* France/IDF1980/2020
* Centre Hospitalier de Bourg en Bresse
* France/Bourg-en-Bresse_06678/2020
* France/Bourg-en-Bresse_06813/2020
* Centre Hospitalier de Macon
* France/Macon_06756/2020
* Centre Hospitalier de Valence
* France/Valence_532/2020
* Centre for Human and Zoonotic Virology (CHAZVY), College of Medicine University of Lagos/Lagos University Teaching Hospital (LUTH), part of the Laboratory Network of the Nigeria Centre for Disease Control (NCDC)
* Nigeria/Lagos01/2020
* Centre for Infectious Diseases and Microbiology - Public Health
* Australia/NSW10/2020
* Australia/NSW12/2020
* Australia/NSW13/2020
* Australia/NSW14/2020
* Centre for Infectious Diseases and Microbiology Laboratory Services
* Australia/NSW01/2020
* Australia/NSW02/2020
* Australia/NSW04/2020
* Australia/NSW05/2020
* Australia/NSW06/2020
* Australia/NSW07/2020
* Australia/NSW08/2020
* Australia/NSW09/2020
* Centre for Infectious Diseases and Microbiology Public Health
* Australia/NSW15/2020
* Australia/NSW18/2020
* Australia/NSW19/2020
* Australia/NSW21/2020
* Australia/NSW24/2020
* Australia/NSW25/2020
* Australia/NSW26/2020
* Australia/NSW27/2020
* Australia/NSW28/2020
* Australia/NSW31/2020
* Australia/NSW35/2020
* Australia/NSW36/2020
* Australia/NSW37/2020
* Australia/NSW38/2020
* Australia/NSW39/2020
* Australia/NSW40/2020
* Australia/NSW41/2020
* Australia/NSW44/2020
* Australia/NSW45/2020
* Australia/NSW47/2020
* Australia/NSW48/2020
* Australia/NSW50/2020
* Australia/NSW52/2020
* Australia/NSW53/2020
* Australia/NSW54/2020
* Australia/NSW56/2020
* Australia/NSW57/2020
* Australia/NSW58/2020
* Australia/NSW61/2020
* Australia/NSW62/2020
* Centre for Infectious Diseases and Microbiology- Public Health
* Australia/NSW11/2020
* Centro Hospital do Porto, E.P.E. - H. Geral de Santo Antonio
* Portugal/CV62/2020
* Centro Hospitalar e Universitario de Sao Joao, Porto
* Portugal/CV63/2020
* Charite Universitatsmedizin Berlin, Institute of Virology; Institut fur Mikrobiologie der Bundeswehr, Munich
* Germany/BavPat1/2020
* Chiu Laboratory, University of California, San Francisco
* USA/CA-CDPH-UC12/2020
* USA/CA-CDPH-UC26/2020
* USA/CA-CDPH-UC27/2020
* USA/CA-CDPH-UC28/2020
* Clinica Alemana de Santiago, Chile
* Chile/Santiago-1/2020
* Clinica Santa Maria, Santiago, Chile
* Chile/Santiago-2/2020
* Clinical Microbiology Lab
* SaudiArabia/KAIMRC-Alghoribi/2020
* Connecticut State Department of Public Health
* USA/CT-Yale-001/2020
* USA/CT-Yale-002/2020
* USA/CT-Yale-003/2020
* USA/CT-Yale-005/2020
* Dasman Diabetes Institute
* Kuwait/KU17/2020
* Kuwait/KU18/2020
* Dasman Diabetes Institute and Virology Laboratory Ministry of Health
* Kuwait/KU09/2020
* Department of Clinical Microbiology
* Belgium/ULG-2971/2020
* Belgium/ULG-3000/2020
* Belgium/ULG-3162/2020
* Belgium/ULG-3163/2020
* Belgium/ULG-3662/2020
* Belgium/ULG-3665/2020
* Belgium/ULG-3683/2020
* Belgium/ULG-3843/2020
* Belgium/ULG-4163/2020
* Belgium/ULG-6216/2020
* Belgium/ULG-6457/2020
* Belgium/ULG-6503/2020
* Belgium/ULG-6638/2020
* Belgium/ULG-6670/2020
* Belgium/ULG-6754/2020
* Belgium/ULG-6939/2020
* Belgium/ULG-6942/2020
* Belgium/ULG-6948/2020
* Belgium/ULG-6950/2020
* Belgium/ULG-6972/2020
* Belgium/ULG-7019/2020
* Department of Clinical Pathology, Pamela Youde Nethersole Eastern Hospital
* HongKong/Case23_26012020/2020
* HongKong/Case27_30012020/2020
* HongKong/Case29_01022020/2020
* HongKong/Case30_29012020/2020
* HongKong/Case31_28012020/2020
* HongKong/Case32_04022020/2020
* HongKong/Case33_02022020/2020
* HongKong/Case34_30012020/2020
* HongKong/Case35_04022020/2020
* Department of Infectious Diseases, Istituto Superiore di Sanita, Roma , Italy
* Italy/CDG1/2020
* Department of Infectious Diseases, Istituto Superiore di Sanita, Rome, Italy
* Italy/SPL1/2020
* Department of Infectious and Tropical Diseases, Bichat Claude Bernard Hospital, Paris
* France/IDF0372-isl/2020
* France/IDF0372/2020
* France/IDF0373/2020
* France/IDF0386-islP1/2020
* France/IDF0386-islP3/2020
* France/IDF0515-isl/2020
* France/IDF0515/2020
* France/IDF0571/2020
* Department of Internal Medicine, Triemli Hospital
* Switzerland/1000477102/2020
* Switzerland/1000477377/2020
* Department of Laboratory Medicine, National Taiwan University Hospital
* Taiwan/NTU01/2020
* Taiwan/NTU02/2020
* Taiwan/NTU03/2020
* Department of Microbiology, Faculty of Medicine, The Chinese University of Hong Kong, Hong Kong SAR, China
* HongKong/CUHK1/2020
* HongKong/CUHK2/2020
* Department of Microbiology, Institute for Viral Diseases, College of Medicine, Korea University
* SouthKorea/KUMC01/2020
* SouthKorea/KUMC02/2020
* SouthKorea/KUMC04/2020
* SouthKorea/KUMC06/2020
* Department of Pathology, Princess Margaret Hospital
* HongKong/Case12_22012020/2020
* HongKong/Case1_21012020/2020
* HongKong/Case2_18012020/2020
* HongKong/Case6_21012020/2020
* Department of Pathology, Toshima Hospital
* Japan/TK/20-31-3/2020
* Department of Pathology, United Christian Hospital
* HongKong/Case17_22012020/2020
* HongKong/Case19_04022020/2020
* HongKong/Case20_30012020/2020
* HongKong/Case28_30012020/2020
* Department of Virology III, National Institute of Infectious Diseases
* Japan/AI/I-004/2020
* Department of Virology and Immunology, University of Helsinki and Helsinki University Hospital, Huslab Finland
* Finland/FIN-114/2020
* Finland/FIN-266/2020
* Finland/FIN-274/2020
* Finland/FIN-313/2020
* Finland/FIN-318/2020
* Finland/FIN-455/2020
* Finland/FIN-508/2020
* Finland/FIN01032020/2020
* Finland/FIN03032020A/2020
* Finland/FIN03032020B/2020
* Finland/FIN03032020C/2020
* Department of Virus and Microbiological Special diagnostics, Statens Serum Institut, Copenhagen, Denmark.
* Denmark/SSI-01/2020
* Denmark/SSI-02/2020
* Denmark/SSI-03/2020
* Denmark/SSI-04/2020
* Denmark/SSI-05/2020
* Denmark/SSI-09/2020
* Denmark/SSI-101/2020
* Denmark/SSI-102/2020
* Denmark/SSI-104/2020
* Department of microbiology laboratory,Anhui Provincial Center for Disease Control and Prevention
* Anhui/SZ005/2020
* Dept. of Pathology, National Institute of Infectious Diseases
* Japan/NA-20-05-1/2020
* Japan/OS-20-07-1/2020
* Dept. of Virology III, National Institute of Infectious Diseases
* Japan/KY-V-029/2020
* Japan/TY-WK-012/2020
* Japan/TY-WK-501/2020
* Japan/TY-WK-521/2020
* Dienst Gezondheid & Jeugd Zuid-Holland Zuid
* Netherlands/Hardinxveld_Giessendam_1364806/2020
* Division of Infectious Diseases, Department of Internal Medicine, Korea University College of Medicine
* SouthKorea/KUMC03/2020
* SouthKorea/KUMC05/2020
* Division of Infectious Diseases, University Hospital Zurich
* Switzerland/1000477796/2020
* Switzerland/1000477797/2020
* Switzerland/1000477806/2020
* Division of Viral Diseases, Center for Laboratory Control of Infectious Diseases, Korea Centers for Diseases Control and Prevention
* SouthKorea/KCDC05/2020
* SouthKorea/KCDC06/2020
* SouthKorea/KCDC07/2020
* SouthKorea/KCDC12/2020
* SouthKorea/KCDC24/2020
* Dunedin Hospital
* NewZealand/CoV001/2020
* NewZealand/CoV002/2020
* Dutch COVID-19 response team
* Netherlands/Flevoland_1/2020
* Netherlands/Gelderland_1/2020
* Netherlands/Gelderland_2/2020
* Netherlands/Gelderland_3/2020
* Netherlands/Limburg_2/2020
* Netherlands/Limburg_3/2020
* Netherlands/Limburg_4/2020
* Netherlands/Limburg_5/2020
* Netherlands/Limburg_6/2020
* Netherlands/Limburg_7/2020
* Netherlands/NA_1/2020
* Netherlands/NA_10/2020
* Netherlands/NA_11/2020
* Netherlands/NA_12/2020
* Netherlands/NA_13/2020
* Netherlands/NA_14/2020
* Netherlands/NA_15/2020
* Netherlands/NA_16/2020
* Netherlands/NA_17/2020
* Netherlands/NA_18/2020
* Netherlands/NA_19/2020
* Netherlands/NA_2/2020
* Netherlands/NA_20/2020
* Netherlands/NA_21/2020
* Netherlands/NA_22/2020
* Netherlands/NA_23/2020
* Netherlands/NA_24/2020
* Netherlands/NA_25/2020
* Netherlands/NA_26/2020
* Netherlands/NA_27/2020
* Netherlands/NA_28/2020
* Netherlands/NA_29/2020
* Netherlands/NA_30/2020
* Netherlands/NA_31/2020
* Netherlands/NA_32/2020
* Netherlands/NA_33/2020
* Netherlands/NA_34/2020
* Netherlands/NA_35/2020
* Netherlands/NA_4/2020
* Netherlands/NA_5/2020
* Netherlands/NA_6/2020
* Netherlands/NA_7/2020
* Netherlands/NA_8/2020
* Netherlands/NA_9/2020
* Netherlands/NoordBrabant_1/2020
* Netherlands/NoordBrabant_10/2020
* Netherlands/NoordBrabant_11/2020
* Netherlands/NoordBrabant_12/2020
* Netherlands/NoordBrabant_13/2020
* Netherlands/NoordBrabant_14/2020
* Netherlands/NoordBrabant_15/2020
* Netherlands/NoordBrabant_16/2020
* Netherlands/NoordBrabant_17/2020
* Netherlands/NoordBrabant_18/2020
* Netherlands/NoordBrabant_19/2020
* Netherlands/NoordBrabant_2/2020
* Netherlands/NoordBrabant_20/2020
* Netherlands/NoordBrabant_21/2020
* Netherlands/NoordBrabant_22/2020
* Netherlands/NoordBrabant_23/2020
* Netherlands/NoordBrabant_24/2020
* Netherlands/NoordBrabant_25/2020
* Netherlands/NoordBrabant_26/2020
* Netherlands/NoordBrabant_27/2020
* Netherlands/NoordBrabant_28/2020
* Netherlands/NoordBrabant_29/2020
* Netherlands/NoordBrabant_3/2020
* Netherlands/NoordBrabant_30/2020
* Netherlands/NoordBrabant_31/2020
* Netherlands/NoordBrabant_32/2020
* Netherlands/NoordBrabant_33/2020
* Netherlands/NoordBrabant_34/2020
* Netherlands/NoordBrabant_35/2020
* Netherlands/NoordBrabant_36/2020
* Netherlands/NoordBrabant_37/2020
* Netherlands/NoordBrabant_38/2020
* Netherlands/NoordBrabant_39/2020
* Netherlands/NoordBrabant_4/2020
* Netherlands/NoordBrabant_41/2020
* Netherlands/NoordBrabant_42/2020
* Netherlands/NoordBrabant_44/2020
* Netherlands/NoordBrabant_45/2020
* Netherlands/NoordBrabant_46/2020
* Netherlands/NoordBrabant_47/2020
* Netherlands/NoordBrabant_48/2020
* Netherlands/NoordBrabant_49/2020
* Netherlands/NoordBrabant_5/2020
* Netherlands/NoordBrabant_51/2020
* Netherlands/NoordBrabant_52/2020
* Netherlands/NoordBrabant_53/2020
* Netherlands/NoordBrabant_54/2020
* Netherlands/NoordBrabant_55/2020
* Netherlands/NoordBrabant_56/2020
* Netherlands/NoordBrabant_57/2020
* Netherlands/NoordBrabant_58/2020
* Netherlands/NoordBrabant_59/2020
* Netherlands/NoordBrabant_6/2020
* Netherlands/NoordBrabant_60/2020
* Netherlands/NoordBrabant_61/2020
* Netherlands/NoordBrabant_62/2020
* Netherlands/NoordBrabant_63/2020
* Netherlands/NoordBrabant_64/2020
* Netherlands/NoordBrabant_65/2020
* Netherlands/NoordBrabant_66/2020
* Netherlands/NoordBrabant_67/2020
* Netherlands/NoordBrabant_68/2020
* Netherlands/NoordHolland_1/2020
* Netherlands/NoordHolland_2/2020
* Netherlands/NoordHolland_3/2020
* Netherlands/Overijssel_1/2020
* Netherlands/Overijssel_2/2020
* Netherlands/Utrecht_1/2020
* Netherlands/Utrecht_10/2020
* Netherlands/Utrecht_11/2020
* Netherlands/Utrecht_12/2020
* Netherlands/Utrecht_13/2020
* Netherlands/Utrecht_14/2020
* Netherlands/Utrecht_15/2020
* Netherlands/Utrecht_16/2020
* Netherlands/Utrecht_17/2020
* Netherlands/Utrecht_18/2020
* Netherlands/Utrecht_19/2020
* Netherlands/Utrecht_2/2020
* Netherlands/Utrecht_3/2020
* Netherlands/Utrecht_4/2020
* Netherlands/Utrecht_5/2020
* Netherlands/Utrecht_6/2020
* Netherlands/Utrecht_7/2020
* Netherlands/Utrecht_8/2020
* Netherlands/ZuidHolland_1/2020
* Netherlands/ZuidHolland_10/2020
* Netherlands/ZuidHolland_11/2020
* Netherlands/ZuidHolland_13/2020
* Netherlands/ZuidHolland_14/2020
* Netherlands/ZuidHolland_15/2020
* Netherlands/ZuidHolland_16/2020
* Netherlands/ZuidHolland_17/2020
* Netherlands/ZuidHolland_18/2020
* Netherlands/ZuidHolland_19/2020
* Netherlands/ZuidHolland_2/2020
* Netherlands/ZuidHolland_20/2020
* Netherlands/ZuidHolland_21/2020
* Netherlands/ZuidHolland_22/2020
* Netherlands/ZuidHolland_23/2020
* Netherlands/ZuidHolland_24/2020
* Netherlands/ZuidHolland_25/2020
* Netherlands/ZuidHolland_26/2020
* Netherlands/ZuidHolland_27/2020
* Netherlands/ZuidHolland_28/2020
* Netherlands/ZuidHolland_29/2020
* Netherlands/ZuidHolland_30/2020
* Netherlands/ZuidHolland_31/2020
* Netherlands/ZuidHolland_5/2020
* Netherlands/ZuidHolland_6/2020
* Netherlands/ZuidHolland_7/2020
* Netherlands/ZuidHolland_8/2020
* Netherlands/ZuidHolland_9/2020
* ErasmusMC
* Netherlands/Nieuwendijk_1363582/2020
* Netherlands/Rotterdam_1363790/2020
* FUNDACION JIMENEZ DIAZ
* Spain/Madrid201442/2020
* Foundation Elisabeth-Tweesteden Ziekenhuis
* Netherlands/Tilburg_1363354/2020
* Netherlands/Tilburg_1364286/2020
* Foundation Pamm
* Netherlands/Berlicum_1363564/2020
* Fujian Center for Disease Control and Prevention
* Fujian/13/2020
* Fujian/8/2020
* General Hospital of Central Theater Command of People's Liberation Army of China
* Wuhan/WH01/2019
* Wuhan/WH02/2019
* Wuhan/WH03/2020
* Wuhan/WH04/2020
* Gorgas Memorial Institute for Health Studies
* Panama/328677/2020
* Guangdong Provincial Center for Diseases Control and Prevention; Guangdong Provincial Public Health
* Foshan/20SF207/2020
* Foshan/20SF210/2020
* Foshan/20SF211/2020
* Guangdong/20SF012/2020
* Guangdong/20SF013/2020
* Guangdong/20SF014/2020
* Guangdong/20SF025/2020
* Guangdong/20SF028/2020
* Guangdong/20SF040/2020
* Guangdong Provincial Center for Diseases Control and Prevention; Guangdong Provinical Public Health
* Guangdong/20SF174/2020
* Guangzhou/20SF206/2020
* Guangdong Provincial Center for Diseases Control and Prevention;Guangdong Provincial Institute of Public Health
* Guangdong/20SF201/2020
* Guangdong Provincial Institution of Public Health, Guangdong Provinical Center for Disease Control and Prevention
* Guangdong/2020XN4239-P0034/2020
* Guangdong/2020XN4243-P0035/2020
* Guangdong/2020XN4273-P0036/2020
* Guangdong/2020XN4276-P0037/2020
* Guangdong/2020XN4291-P0038/2020
* Guangdong/2020XN4373-P0039/2020
* Guangdong/2020XN4433-P0040/2020
* Guangdong/2020XN4448-P0002/2020
* Guangdong/2020XN4459-P0041/2020
* Guangdong/2020XN4475-P0042/2020
* Guangdong/DG-S2-P0054/2020
* Guangdong/DG-S41-P0056/2020
* Guangdong/DG-S6-P0055/2020
* Guangdong/DG-S9-P0045/2020
* Guangdong/FS-S29-P0051/2020
* Guangdong/FS-S30-P0052/2020
* Guangdong/FS-S34-P0015/2020
* Guangdong/FS-S42-P0046/2020
* Guangdong/FS-S48-P0047/2020
* Guangdong/FS-S50-P0053/2020
* Guangdong/GD2020012-P0022/2020
* Guangdong/GD2020016-P0011/2020
* Guangdong/GD2020080-P0010/2020
* Guangdong/GD2020085-P0043/2020
* Guangdong/GD2020086-P0021/2020
* Guangdong/GD2020087-P0008/2020
* Guangdong/GD2020115-P0009/2020
* Guangdong/GD2020134-P0031/2020
* Guangdong/GD2020139-P0007/2020
* Guangdong/GD2020227-P0029/2020
* Guangdong/GD2020233-P0027/2020
* Guangdong/GD2020234-P0023/2020
* Guangdong/GD2020241-P0013/2020
* Guangdong/GD2020246-P0028/2020
* Guangdong/GD2020258-P0018/2020
* Guangdong/GDFS2020052-P0025/2020
* Guangdong/GDFS2020054-P0005/2020
* Guangdong/GDFS2020056-P0044/2020
* Guangdong/GDFS2020127-P0026/2020
* Guangdong/GDSZ202004-P0004/2020
* Guangdong/GDSZ202008-P0020/2020
* Guangdong/GDSZ202009-P0032/2020
* Guangdong/GDSZ202013-P0014/2020
* Guangdong/GDSZ202015-P0019/2020
* Guangdong/GZ-S6-P0050/2020
* Guangdong/JM-S1-P0062/2020
* Guangdong/MM-S1-P0048/2020
* Guangdong/SZ-N128-P0057/2020
* Guangdong/SZ-N59-P0049/2020
* Guangdong/ZH-N22-P0059/2020
* Guangdong/ZH-S33-P0058/2020
* Guangdong/ZQ-S2-P0061/2020
* Guangdong/ZS-S6-P0060/2020
* HOSPITAL SANTA MARIA NAI
* Spain/Galicia201663/2020
* HUS Diagnostiikkakeskus, Hallinto
* Finland/FIN-25/2020
* Hangzhou Center for Disease Control and Prevention
* Hangzhou/HZCDC0001/2020
* Hangzhou Center for Disease and Control Microbiology Lab
* Hangzhou/HZ-1/2020
* Harborview Medical Center
* USA/WA3-UW1/2020
* USA/WA9-UW6/2020
* Hong Kong Department of Health
* HongKong/VB20024950/2020
* HongKong/VB20026565/2020
* HongKong/VM20001061/2020
* HongKong/case42_VM20002493/2020
* HongKong/case48_VM20002507/2020
* HongKong/case49_VM20002508/2020
* HongKong/case52_VM20002582/2020
* HongKong/case78_VM20002849/2020
* HongKong/case85_VM20002868/2020
* HongKong/case90_VM20002907/2020
* Hopital Instruction des Armees - BEGIN
* France/IDF2075/2020
* Hopital Robert Debre Laboratoire de Virologie
* France/GE1973/2020
* France/GE1977/2020
* Hopital franco britannique - Service des Urgences
* France/IDF2284/2020
* Hopitaux universitaires de Geneve Laboratoire de Virologie
* Switzerland/AG7120/2020
* Switzerland/BE2536/2020
* Switzerland/BE6651/2020
* Switzerland/BS0914/2020
* Switzerland/GE0199/2020
* Switzerland/GE06207/2020
* Switzerland/GE1402/2020
* Switzerland/GE1422/2020
* Switzerland/GE4135/2020
* Switzerland/GE4984/2020
* Switzerland/GE6679/2020
* Switzerland/GE8102/2020
* Switzerland/GR2988/2020
* Switzerland/GR3043/2020
* Switzerland/SZ1417/2020
* Switzerland/TI2045/2020
* Switzerland/VD0503/2020
* Hospital Israelita Albert Einstein
* Brazil/SPBR-01/2020
* Brazil/SPBR-02/2020
* Brazil/SPBR-03/2020
* Brazil/SPBR-11/2020
* Brazil/SPBR-12/2020
* Hospital Sao Joaquim Beneficencia Portuguesa
* Brazil/SPBR-04/2020
* Brazil/SPBR-05/2020
* Brazil/SPBR-06/2020
* Hospital de Talca, Chile
* Chile/Talca-1/2020
* Chile/Talca-2/2020
* IL Department of Public Health Chicago Laboratory
* USA/IL1/2020
* USA/IL2/2020
* INMI Lazzaro Spallanzani IRCCS
* Italy/INMI1-cs/2020
* Italy/INMI1-isl/2020
* Indian Council of Medical Research - National Institute of Virology
* India/1-27/2020
* Indian Council of Medical Research-National Institute of Virology
* India/1-31/2020
* Institut Medico legal- Hop R. Poincare
* France/IDF2256/2020
* Institut des Agents Infectieux (IAI) Hospices Civils de Lyon
* France/Lyon_06464/2020
* France/Lyon_06487/2020
* France/Lyon_06531/2020
* France/Lyon_0693/2020
* France/Lyon_487/2020
* France/Lyon_508/2020
* France/Lyon_683/2020
* Institut des Agents Infectieux (IAI), Hospices Civils de Lyon
* France/Lyon_06042/2020
* France/Lyon_06056/2020
* France/Lyon_06573/2020
* France/Lyon_06625/2020
* France/Lyon_0668/2020
* France/Lyon_06820/2020
* Institute of Pathogen Biology, Chinese Academy of Medical Sciences & Peking Union Medical College
* Wuhan/IPBCAMS-WH-01/2019
* Wuhan/IPBCAMS-WH-02/2019
* Wuhan/IPBCAMS-WH-03/2019
* Wuhan/IPBCAMS-WH-04/2019
* Wuhan/IPBCAMS-WH-05/2020
* Institute of Viral Disease Control and Prevention, China CDC
* Wuhan/IVDC-HB-envF13-20/2020
* Wuhan/IVDC-HB-envF13-21/2020
* Wuhan/IVDC-HB-envF13/2020
* Wuhan/IVDC-HB-envF54/2020
* Instituto Nacional de Enfermedades Respiratorias
* Mexico/CDMX-InDRE_01/2020
* Japanese Quarantine Stations
* Japan/DP0005/2020
* Japan/DP0027/2020
* Japan/DP0037/2020
* Japan/DP0058/2020
* Japan/DP0059/2020
* Japan/DP0065/2020
* Japan/DP0077/2020
* Japan/DP0078/2020
* Japan/DP0104/2020
* Japan/DP0107/2020
* Japan/DP0121/2020
* Japan/DP0133/2020
* Japan/DP0134/2020
* Japan/DP0152/2020
* Japan/DP0158/2020
* Japan/DP0184/2020
* Japan/DP0190/2020
* Japan/DP0191/2020
* Japan/DP0196/2020
* Japan/DP0200/2020
* Japan/DP0236/2020
* Japan/DP0274/2020
* Japan/DP0278/2020
* Japan/DP0286/2020
* Japan/DP0287/2020
* Japan/DP0289/2020
* Japan/DP0290/2020
* Japan/DP0294/2020
* Japan/DP0311/2020
* Japan/DP0319/2020
* Japan/DP0328/2020
* Japan/DP0344/2020
* Japan/DP0346/2020
* Japan/DP0357/2020
* Japan/DP0361/2020
* Japan/DP0438/2020
* Japan/DP0457/2020
* Japan/DP0462/2020
* Japan/DP0464/2020
* Japan/DP0476/2020
* Japan/DP0481/2020
* Japan/DP0482/2020
* Japan/DP0543/2020
* Japan/DP0544/2020
* Japan/DP0568/2020
* Japan/DP0588/2020
* Japan/DP0644/2020
* Japan/DP0645/2020
* Japan/DP0654/2020
* Japan/DP0687/2020
* Japan/DP0690/2020
* Japan/DP0697/2020
* Japan/DP0699/2020
* Japan/DP0700/2020
* Japan/DP0703/2020
* Japan/DP0724/2020
* Japan/DP0743/2020
* Japan/DP0752/2020
* Japan/DP0763/2020
* Japan/DP0764/2020
* Japan/DP0765/2020
* Japan/DP0779/2020
* Japan/DP0785/2020
* Japan/DP0786/2020
* Japan/DP0802/2020
* Japan/DP0803/2020
* Japan/DP0804/2020
* Japan/DP0827/2020
* Japan/DP0880/2020
* Japan/DP0890/2020
* Jiangxi province Center for Disease Control and Prevention
* NanChang/JX216/2020
* Jingzhou Center for Disease Control and Prevention
* Jingzhou/HBCDC-HB-01/2020
* KU Leuven, Clincal and Epidemiological Virology
* Belgium/BM-03012/2020
* KU Leuven, Clinical and Epidemiological Virology
* Belgium/BA-02291/2020
* Belgium/BC-03016/2020
* Belgium/DB-03023/2020
* Belgium/DBA-03032/2020
* Belgium/DBD-03024/2020
* Belgium/DHWM-03041/2020
* Belgium/FR-03029/2020
* Belgium/GHB-03021/2020
* Belgium/GMH-03022/2020
* Belgium/KA-03042/2020
* Belgium/MMJ-03034/2020
* Belgium/MTR-03021/2020
* Belgium/MTR-03026/2020
* Belgium/QKJ-03015/2020
* Belgium/RT-03035/2020
* Belgium/SH-03014/2020
* Belgium/SN-03031/2020
* Belgium/SQ-03043/2020
* Belgium/UMF-03025/2020
* Belgium/VAG-03013/2020
* Belgium/VBK-03061/2020
* Belgium/VI-03027/2020
* Belgium/VLM-03011/2020
* Klinik Hirslanden Zurich
* Switzerland/1000477757/2020
* Korea Centers for Disease Control & Prevention (KCDC) Center for Laboratory Control of Infectious Diseases Division of Viral Diseases
* SouthKorea/KCDC03/2020
* LABM GH nord Essonne
* France/IDF2278/2020
* France/IDF2279/2020
* LACEN RJ - Laboratorio Central de Saude Publica Noel Nutels
* Brazil/RJ-314/2020
* LACEN/ES - Laboratorio Central de Saude Publica do Espirito Santo
* Brazil/ES-225/2020
* Laboiratorio Fleury
* Brazil/SPBR-08/2020
* Laboratoire National de Sante
* Luxembourg/Lux1/2020
* Laboratoire de Virologie Institut de Virologie - INSERM U 1109 Hopitaux Universitaires de Strasbourg
* France/GE1583/2020
* Laboratoire de Virologie, HUG
* Switzerland/AG0361/2020
* Switzerland/BL0902/2020
* Switzerland/GE3121/2020
* Switzerland/GE3895/2020
* Switzerland/GE5373/2020
* Switzerland/GE9586/2020
* Switzerland/TI9486/2020
* Switzerland/VD5615/2020
* Laboratorio Central de Saude Publica Professor Goncalo Moniz LACEN/BA
* Brazil/BA-312/2020
* Laboratorio de Ecologia de Doencas Transmissiveis na Amazonia, Instituto Leonidas e Maria Deane - Fiocruz Amazonia
* Brazil/AMBR-02/2020
* Laboratorio de Referencia Nacional de Virus Respiratorio. Instituto Nacional de Salud. Peru
* Peru/010/2020
* Laboratorio de Referencia Nacional de Virus Respiratorios. Instituto Nacional de Salud Peru
* Peru/01/2020
* Laboratorio di Microbiologia e Virologia, Universita Vita-Salute San Raffaele, Milano
* Italy/UniSR1/2020
* Laboratory Medicine
* Taiwan/CGMH-CGU-01/2020
* Taiwan/CGMH-CGU-03/2020
* Taiwan/CGMH-CGU-04/2020
* Taiwan/CGMH-CGU-05/2020
* Laboratory of Molecular Virology International Center for Genetic Engineering and Biotechnology (ICGEB)
* Italy/FVG-ICGEB_S5/2020
* Italy/FVG-ICGEB_S8/2020
* Italy/FVG-ICGEB_S9/2020
* Laboratory of Molecular Virology International Center fro Genetic Engineering and Biotechnology (ICGEB)
* Italy/FVG-ICGEB_S1/2020
* Laboratory of Molecular Virology, Pontificia Universidad Catolica de Chile
* Chile/Santiago_op2d1/2020
* Chile/Santiago_op3d1/2020
* Chile/Santiago_op4d1/2020
* Lapland Central Hospital
* Finland/1/2020
* MHC Brabant Zuidoost
* Netherlands/Eindhoven_1363782/2020
* MHC Drente
* Netherlands/Dalen_1363624/2020
* MHC Flevoland
* Netherlands/Zeewolde_1365080/2020
* MHC Gooi & Vechtstreek
* Netherlands/Blaricum_1364780/2020
* Netherlands/Naarden_1364774/2020
* MHC Haaglanden
* Netherlands/Nootdorp_1364222/2020
* MHC Hart voor Brabant
* Netherlands/Oisterwijk_1364072/2020
* MHC Kennemerland
* Netherlands/Haarlem_1363688/2020
* MHC Rotterdam-Rijnmond
* Netherlands/Rotterdam_1364040/2020
* MHC Utrecht
* Netherlands/Utrecht_1363564/2020
* Netherlands/Utrecht_1363628/2020
* Netherlands/Utrecht_1364066/2020
* MHC West-Brabant
* Netherlands/Andel_1365066/2020
* Netherlands/Helmond_1363548/2020
* MSHS Clinical Microbiology Laboratories
* USA/NY1-PV08001/2020
* USA/NY2-PV08100/2020
* Massachusetts Department of Public Health
* USA/MA1/2020
* Minnesota Department of Health, Public Health Laboratory
* USA/MN1-MDH1/2020
* USA/MN2-MDH2/2020
* USA/MN25-MDH25/2020
* USA/MN26-MDH26/2020
* USA/MN29-MDH29/2020
* USA/MN3-MDH3/2020
* USA/MN30-MDH30/2020
* USA/MN4-MDH4/2020
* USA/MN5-MDH5/2020
* Monash Medical Centre
* Australia/VIC01/2020
* NHC Key laboratory of Enteric Pathogenic Microbiology, Institute of Pathogenic Microbiology
* Jiangsu/JS01/2020
* Jiangsu/JS02/2020
* Jiangsu/JS03/2020
* NRL for Influenza, Centrum Epidemiology and Microbiology of National Institute of Public Health, Czech Republic
* CzechRepublic/ChVir1630/2020
* CzechRepublic/ChVir1912/2020
* NYU Langone Health
* USA/NY-NYUMC1/2020
* USA/NY-NYUMC2/2020
* USA/NY-NYUMC3/2020
* USA/NY-NYUMC4/2020
* National Centre for Infectious Diseases
* Singapore/12/2020
* Singapore/13/2020
* Singapore/14/2020
* Singapore/3/2020
* Singapore/4/2020
* National Influenza Center - Instituto Adolfo Lutz
* Brazil/SPBR-07/2020
* Brazil/SPBR-09/2020
* Brazil/SPBR-10/2020
* Brazil/SPBR-13/2020
* Brazil/SPBR-14/2020
* National Influenza Center - National Institute of Hygiene and Epidemiology (NIHE)
* Vietnam/VR03-38142/2020
* National Influenza Center, National Institute of Hygiene and Epidemiology (NIHE)
* Vietnam/38142/2020
* Vietnam/39607/2020
* Vietnam/CM295/2020
* Vietnam/CM296/2020
* Vietnam/CM99/2020
* National Influenza Centre, National Public Health Laboratory, Kathmandu, Nepal
* Nepal/61/2020
* National Institute for Communicable Diseases of the National Health Laboratory Service
* SouthAfrica/R03006-20/2020
* National Institute for Viral Disease Control and Prevention, China CDC
* Beijing/IVDC-BJ-005/2020
* Chongqing/IVDC-CQ-001/2020
* Henan/IVDC-HeN-002/2020
* Jiangsu/IVDC-JS-001/2020
* Jiangxi/IVDC-JX-002/2020
* Shandong/IVDC-SD-001/2020
* Shanghai/IVDC-SH-001/2020
* Sichuan/IVDC-SC-001/2020
* Wuhan/IVDC-HB-01/2019
* Wuhan/IVDC-HB-04/2020
* Wuhan/IVDC-HB-05/2019
* Yunnan/IVDC-YN-003/2020
* National Public Health Laboratory
* Malaysia/MKAK-CL-2020-5045/2020
* Malaysia/MKAK-CL-2020-5047/2020
* Malaysia/MKAK-CL-2020-5049/2020
* Malaysia/MKAK-CL-2020-5096/2020
* Malaysia/MKAK-CL-2020-6430/2020
* Malaysia/MKAK-CL-2020-7554/2020
* Singapore/11/2020
* National Public Health Laboratory, National Centre for Infectious Diseases
* Singapore/10/2020
* Singapore/7/2020
* Singapore/8/2020
* Singapore/9/2020
* National Public Health Surveillance Laboratory, Vilnius, Lithuania
* Lithuania/ChVir1632/2020
* Pathology Queensland
* Australia/QLD01/2020
* Australia/QLD02/2020
* Australia/QLD03/2020
* Australia/QLD04/2020
* Australia/QLD09/2020
* Australia/QLDID919/2020
* Prince of Wales Hospital
* HongKong/case2_VB20017970/2020
* Providence Regional Medical Center
* USA/WA1/2020
* Public Health Laboratory
* SaudiArabia/SCDC-3321/2020
* Public Health Laboratory, Saudi CDC
* SaudiArabia/SCDC-3324/2020
* Public Health Ontario Laboratory
* Canada/ON-PHL2445/2020
* Canada/ON-VIDO-01/2020
* R. G. Lugar Center for Public Health Research, National Center for Disease Control and Public Health (NCDC) of Georgia.
* Georgia/Tb-273/2020
* Georgia/Tb-390/2020
* Georgia/Tb-468/2020
* Georgia/Tb-477/2020
* Georgia/Tb-537/2020
* Georgia/Tb-54/2020
* Georgia/Tb-673/2020
* Georgia/Tb-712/2020
* Georgia/Tb-82/2020
* Georgia/Tb/2020
* RIVM
* Netherlands/Delft_1363424/2020
* Netherlands/Diemen_1363454/2020
* Netherlands/Loon_op_zand_1363512/2020
* Netherlands/Oss_1363500/2020
* NetherlandsL/Houten_1363498/2020
* Regional Virus Laboratory, Belfast
* NorthernIreland/HSCNI01/2020
* Respiratory Virus Unit, Microbiology Services Colindale, Public Health England
* England/01/2020
* England/02/2020
* England/09c/2020
* England/200641094/2020
* England/200690245/2020
* England/200690300/2020
* England/200690306/2020
* England/200690756/2020
* England/200940527/2020
* England/200960041/2020
* England/200960515/2020
* England/200981386/2020
* England/200990002/2020
* England/200990006/2020
* England/20099038206/2020
* England/200990660/2020
* England/200990723/2020
* England/200990724/2020
* England/200990725/2020
* England/20099079106/2020
* England/20099107406/2020
* England/200991076/2020
* England/201000003/2020
* England/20100001406/2020
* England/20100004706/2020
* England/20100004806/2020
* England/20100005406/2020
* England/20100022706/2020
* England/20100023206/2020
* England/20100024006/2020
* England/20100077906/2020
* England/20100121006/2020
* England/20100121007/2020
* England/20100122106/2020
* England/20100122107/2020
* England/20102000106/2020
* England/20102000206/2020
* England/20102000306/2020
* England/20102000506/2020
* England/20102000906/2020
* England/20102068502/2020
* England/20102068506/2020
* England/20102073303/2020
* England/20102087902/2020
* England/20102088002/2020
* England/20102098802/2020
* England/20102112102/2020
* England/20102115303/2020
* England/20104002606/2020
* England/20104002902/2020
* England/20104003002/2020
* England/20104004402/2020
* England/20104004502/2020
* England/20104004802/2020
* England/20104004902/2020
* England/20104007503/2020
* England/201040081/2020
* England/20104008402/2020
* England/20104008502/2020
* England/20104008702/2020
* England/20104008802/2020
* England/20104008902/2020
* England/20104009002/2020
* England/20104009102/2020
* England/20104013703/2020
* England/201040141/2020
* England/20104015302/2020
* England/20104023103/2020
* England/20104035803/2020
* England/20106003303/2020
* England/20106004803/2020
* England/20106004902/2020
* England/20106005103/2020
* England/20106005303/2020
* England/20106005403/2020
* England/20106087206/2020
* England/20106145903/2020
* England/20108003202/2020
* England/20108003302/2020
* England/20108004602/2020
* England/20108004702/2020
* England/20108004803/2020
* England/20108006003/2020
* England/20108006603/2020
* England/20108006802/2020
* England/20108007002/2020
* England/20108007302/2020
* England/20108007402/2020
* England/20108034006/2020
* England/20108125106/2020
* England/20109035906/2020
* England/20109038906/2020
* England/20109039306/2020
* England/20109050106/2020
* England/20109050306/2020
* England/20109050406/2020
* England/20109050506/2020
* England/20109050606/2020
* England/20109050706/2020
* England/20109050806/2020
* England/20109051806/2020
* England/20109051906/2020
* England/20109052006/2020
* England/20109052106/2020
* England/20109052206/2020
* England/20109052306/2020
* England/20109052506/2020
* England/20109053106/2020
* England/20109053406/2020
* England/20109053606/2020
* England/20109054806/2020
* England/20109056406/2020
* England/20109056906/2020
* England/20109058906/2020
* England/20109060106/2020
* England/20109093606/2020
* England/20109093706/2020
* England/20109093806/2020
* England/20109093906/2020
* England/20109094006/2020
* England/20109094106/2020
* England/20109094206/2020
* England/20109094506/2020
* England/20109097506/2020
* England/20109097906/2020
* England/20109098806/2020
* England/20109098906/2020
* England/20109099006/2020
* England/20109099106/2020
* England/20109099206/2020
* England/20110000106/2020
* England/20110000606/2020
* England/20110000706/2020
* England/20110000806/2020
* England/20110000906/2020
* England/20110003506/2020
* England/20110005006/2020
* England/20110015106/2020
* England/20110023706/2020
* England/20110042006/2020
* England/20110042106/2020
* England/20110043706/2020
* England/20110058706/2020
* England/20110059306/2020
* England/20110097506/2020
* England/20112112106/2020
* England/20118044606/2020
* Rockhampton Base Hospital
* Australia/QLDID920/2020
* Saitama Medical University
* Japan/SMU-0311S3/2020
* Saitama Medical University Hospital
* Japan/SMU-0311S2/2020
* Santa Clara County Public Health Department
* USA/CA-SCCPHD-UC13/2020
* USA/CA-SCCPHD-UC14/2020
* USA/CA-SCCPHD-UC15/2020
* USA/CA-SCCPHD-UC16/2020
* USA/CA-SCCPHD-UC17/2020
* Seattle Flu Study
* USA/WA-S10/2020
* USA/WA-S11/2020
* USA/WA-S110/2020
* USA/WA-S111/2020
* USA/WA-S112/2020
* USA/WA-S2/2020
* USA/WA-S3/2020
* USA/WA-S4/2020
* USA/WA-S5/2020
* USA/WA-S6/2020
* USA/WA-S7/2020
* USA/WA-S8/2020
* USA/WA-S9/2020
* Second Hospital of Anhui Medical University
* Hefei/2/2020
* Serology, Virology and OTDS Laboratories (SAViD), NSW Health Pathology Randwick
* Australia/NSW03/2020
* Servicio Microbiologia, Hospital Clinico Universitario, Valencia
* Spain/Valencia3/2020
* Servicio Microbiologia. Hospital Clinico Universitario. Valencia.
* Spain/Valencia1/2020
* Spain/Valencia2/2020
* Servicio de Microbiologia. Consorcio Hospital General Universitario de Valencia
* Spain/Valencia10/2020
* Spain/Valencia4/2020
* Spain/Valencia5/2020
* Spain/Valencia6/2020
* Spain/Valencia7/2020
* Spain/Valencia8/2020
* Spain/Valencia9/2020
* Shandong Provincial Center for Disease Control and Prevention
* Shandong/LY001/2020
* Shandong/LY002/2020
* Shandong/LY003/2020
* Shandong/LY004/2020
* Shandong/LY005/2020
* Shandong/LY006/2020
* Shandong/LY007/2020
* Shandong/LY008/2020
* Shanghai Public Health Clinical Center, Shanghai Medical College, Fudan University
* Shanghai/SH0002/2020
* Shanghai/SH0003/2020
* Shanghai/SH0004/2020
* Shanghai/SH0005/2020
* Shanghai/SH0007/2020
* Shanghai/SH0008/2020
* Shanghai/SH0009/2020
* Shanghai/SH0010/2020
* Shanghai/SH0011/2020
* Shanghai/SH0012/2020
* Shanghai/SH0013/2020
* Shanghai/SH0014/2020
* Shanghai/SH0017/2020
* Shanghai/SH0020/2020
* Shanghai/SH0021/2020
* Shanghai/SH0022/2020
* Shanghai/SH0023/2020
* Shanghai/SH0024/2020
* Shanghai/SH0025/2020
* Shanghai/SH0026/2020
* Shanghai/SH0027/2020
* Shanghai/SH0028/2020
* Shanghai/SH0029/2020
* Shanghai/SH0030/2020
* Shanghai/SH0031/2020
* Shanghai/SH0032/2020
* Shanghai/SH0033/2020
* Shanghai/SH0034/2020
* Shanghai/SH0035/2020
* Shanghai/SH0036/2020
* Shanghai/SH0037/2020
* Shanghai/SH0038/2020
* Shanghai/SH0039/2020
* Shanghai/SH0040/2020
* Shanghai/SH0041/2020
* Shanghai/SH0042/2020
* Shanghai/SH0043/2020
* Shanghai/SH0044/2020
* Shanghai/SH0045/2020
* Shanghai/SH0047/2020
* Shanghai/SH0048/2020
* Shanghai/SH0049/2020
* Shanghai/SH0050/2020
* Shanghai/SH0051/2020
* Shanghai/SH0052/2020
* Shanghai/SH0053/2020
* Shanghai/SH0054/2020
* Shanghai/SH0055/2020
* Shanghai/SH0056/2020
* Shanghai/SH0058/2020
* Shanghai/SH0059/2020
* Shanghai/SH0060/2020
* Shanghai/SH0065/2020
* Shanghai/SH0066/2020
* Shanghai/SH0067/2020
* Shanghai/SH0068/2020
* Shanghai/SH0069/2020
* Shanghai/SH0070/2020
* Shanghai/SH0071/2020
* Shanghai/SH0072/2020
* Shanghai/SH0073/2020
* Shanghai/SH0074/2020
* Shanghai/SH0075/2020
* Shanghai/SH0076/2020
* Shanghai/SH0077/2020
* Shanghai/SH0079/2020
* Shanghai/SH0080/2020
* Shanghai/SH0081/2020
* Shanghai/SH0083/2020
* Shanghai/SH0085/2020
* Shanghai/SH0086/2020
* Shanghai/SH0088/2020
* Shanghai/SH0091/2020
* Shanghai/SH0093/2020
* Shanghai/SH0094/2020
* Shanghai/SH0098/2020
* Shanghai/SH0100/2020
* Shanghai/SH0101/2020
* Shanghai/SH0102/2020
* Shanghai/SH0104/2020
* Shanghai/SH0106/2020
* Shanghai/SH0107/2020
* Shanghai/SH0109/2020
* Shanghai/SH0110/2020
* Shanghai/SH0112/2020
* Shanghai/SH0114/2020
* Shanghai/SH0115/2020
* Shanghai/SH0117/2020
* Shanghai/SH0119/2020
* Shanghai/SH0121/2020
* Shanghai/SH0125/2020
* Shanghai/SH0126/2020
* Shanghai/SH0127/2020
* Shanghai/SH0128/2020
* Shenzhen Key Laboratory of Pathogen and Immunity, National Clinical Research Center for Infectious Disease, Shenzhen Third People's Hospital
* Shenzhen/SZTH-002/2020
* Shenzhen/SZTH-003/2020
* Shenzhen/SZTH-004/2020
* Shenzhen Third People's Hospital
* Shenzhen/SZTH-001/2020
* Singapore General Hospital
* Singapore/1/2020
* Singapore/2/2020
* Singapore General Hospital, Molecular Laboratory, Division of Pathology
* Singapore/5/2020
* Singapore/6/2020
* Sorbonne Universite, Inserm et Assistance Publique-Hopitaux de Paris (Pitie Salpetriere)
* France/IDF0626/2020
* South China Agricultural University
* pangolin/Guangdong/1/2019
* State Health Office Baden-Wuerttemberg
* Germany/Baden-Wuerttemberg-1/2020
* State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China 310003
* Hangzhou/ZJU-03/2020
* Hangzhou/ZJU-04/2020
* Hangzhou/ZJU-06/2020
* Hangzhou/ZJU-07/2020
* Hangzhou/ZJU-08/2020
* Hangzhou/ZJU-09/2020
* State Key Laboratory for Diagnosis and Treatment of Infectious Diseases, National Clinical Research Center for Infectious Diseases, First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou, China. 310003
* Hangzhou/ZJU-01/2020
* Hangzhou/ZJU-02/2020
* Hangzhou/ZJU-05/2020
* State Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, the First Affiliated Hospital of Guangzhou Medical University
* Guangzhou/GZMU0014/2020
* Guangzhou/GZMU0016/2020
* Guangzhou/GZMU0030/2020
* Guangzhou/GZMU0031/2020
* Guangzhou/GZMU0042/2020
* Guangzhou/GZMU0044/2020
* Guangzhou/GZMU0047/2020
* Guangzhou/GZMU0048/2020
* Sullivan Nicolaides Pathology
* Australia/QLDID921/2020
* Tai Lung Veterinary Laboratory, Agriculture, Fisheries and Conservation Department
* canine/HongKong/20-02756/2020
* Taiwan Centers for Disease Control
* Taiwan/3/2020
* Taiwan/4/2020
* Texas Department of State Health Services
* USA/TX1/2020
* The Central Hospital Of Wuhan
* Wuhan/HBCDC-HB-02/2020
* The National Institute of Public Health Center for Epidemiology and Microbiology
* CzechRepublic/951/2020
* The University of Hong Kong - Shenzhen Hospital
* Shenzhen/HKU-SZ-002/2020
* Shenzhen/HKU-SZ-005/2020
* Tianmen Center for Disease Control and Prevention
* Tianmen/HBCDC-HB-07/2020
* UCD National Virus Reference Laboratory
* Ireland/COR-20134/2020
* Ireland/Cork2/2020
* Ireland/Dublin-19072/2020
* Ireland/Limerick-19933/2020
* Ireland/Limerick-19934/2020
* Ireland/Limerick-19935/2020
* UW Virology Lab
* USA/WA-UW100/2020
* USA/WA-UW101/2020
* USA/WA-UW102/2020
* USA/WA-UW103/2020
* USA/WA-UW104/2020
* USA/WA-UW105/2020
* USA/WA-UW106/2020
* USA/WA-UW107/2020
* USA/WA-UW108/2020
* USA/WA-UW109/2020
* USA/WA-UW110/2020
* USA/WA-UW111/2020
* USA/WA-UW112/2020
* USA/WA-UW113/2020
* USA/WA-UW114/2020
* USA/WA-UW115/2020
* USA/WA-UW116/2020
* USA/WA-UW117/2020
* USA/WA-UW118/2020
* USA/WA-UW119/2020
* USA/WA-UW120/2020
* USA/WA-UW121/2020
* USA/WA-UW122/2020
* USA/WA-UW123/2020
* USA/WA-UW124/2020
* USA/WA-UW125/2020
* USA/WA-UW126/2020
* USA/WA-UW127/2020
* USA/WA-UW128/2020
* USA/WA-UW129/2020
* USA/WA-UW130/2020
* USA/WA-UW131/2020
* USA/WA-UW132/2020
* USA/WA-UW133/2020
* USA/WA-UW134/2020
* USA/WA-UW135/2020
* USA/WA-UW136/2020
* USA/WA-UW137/2020
* USA/WA-UW138/2020
* USA/WA-UW139/2020
* USA/WA-UW140/2020
* USA/WA-UW141/2020
* USA/WA-UW142/2020
* USA/WA-UW143/2020
* USA/WA-UW144/2020
* USA/WA-UW145/2020
* USA/WA-UW146/2020
* USA/WA-UW147/2020
* USA/WA-UW148/2020
* USA/WA-UW149/2020
* USA/WA-UW15/2020
* USA/WA-UW150/2020
* USA/WA-UW151/2020
* USA/WA-UW152/2020
* USA/WA-UW153/2020
* USA/WA-UW154/2020
* USA/WA-UW155/2020
* USA/WA-UW156/2020
* USA/WA-UW157/2020
* USA/WA-UW158/2020
* USA/WA-UW159/2020
* USA/WA-UW16/2020
* USA/WA-UW160/2020
* USA/WA-UW161/2020
* USA/WA-UW162/2020
* USA/WA-UW163/2020
* USA/WA-UW164/2020
* USA/WA-UW165/2020
* USA/WA-UW166/2020
* USA/WA-UW167/2020
* USA/WA-UW168/2020
* USA/WA-UW169/2020
* USA/WA-UW17/2020
* USA/WA-UW170/2020
* USA/WA-UW171/2020
* USA/WA-UW172/2020
* USA/WA-UW173/2020
* USA/WA-UW174/2020
* USA/WA-UW175/2020
* USA/WA-UW176/2020
* USA/WA-UW177/2020
* USA/WA-UW178/2020
* USA/WA-UW179/2020
* USA/WA-UW18/2020
* USA/WA-UW180/2020
* USA/WA-UW181/2020
* USA/WA-UW182/2020
* USA/WA-UW183/2020
* USA/WA-UW184/2020
* USA/WA-UW185/2020
* USA/WA-UW186/2020
* USA/WA-UW187/2020
* USA/WA-UW188/2020
* USA/WA-UW189/2020
* USA/WA-UW19/2020
* USA/WA-UW190/2020
* USA/WA-UW191/2020
* USA/WA-UW192/2020
* USA/WA-UW193/2020
* USA/WA-UW194/2020
* USA/WA-UW195/2020
* USA/WA-UW196/2020
* USA/WA-UW197/2020
* USA/WA-UW198/2020
* USA/WA-UW199/2020
* USA/WA-UW20/2020
* USA/WA-UW200/2020
* USA/WA-UW201/2020
* USA/WA-UW202/2020
* USA/WA-UW203/2020
* USA/WA-UW204/2020
* USA/WA-UW205/2020
* USA/WA-UW206/2020
* USA/WA-UW207/2020
* USA/WA-UW208/2020
* USA/WA-UW209/2020
* USA/WA-UW21/2020
* USA/WA-UW210/2020
* USA/WA-UW211/2020
* USA/WA-UW212/2020
* USA/WA-UW213/2020
* USA/WA-UW214/2020
* USA/WA-UW215/2020
* USA/WA-UW216/2020
* USA/WA-UW217/2020
* USA/WA-UW218/2020
* USA/WA-UW219/2020
* USA/WA-UW22/2020
* USA/WA-UW220/2020
* USA/WA-UW221/2020
* USA/WA-UW222/2020
* USA/WA-UW223/2020
* USA/WA-UW224/2020
* USA/WA-UW225/2020
* USA/WA-UW226/2020
* USA/WA-UW227/2020
* USA/WA-UW228/2020
* USA/WA-UW229/2020
* USA/WA-UW23/2020
* USA/WA-UW230/2020
* USA/WA-UW231/2020
* USA/WA-UW232/2020
* USA/WA-UW233/2020
* USA/WA-UW24/2020
* USA/WA-UW25/2020
* USA/WA-UW26/2020
* USA/WA-UW27/2020
* USA/WA-UW28/2020
* USA/WA-UW29/2020
* USA/WA-UW30/2020
* USA/WA-UW31/2020
* USA/WA-UW32/2020
* USA/WA-UW33/2020
* USA/WA-UW34/2020
* USA/WA-UW35/2020
* USA/WA-UW36/2020
* USA/WA-UW37/2020
* USA/WA-UW38/2020
* USA/WA-UW39/2020
* USA/WA-UW40/2020
* USA/WA-UW41/2020
* USA/WA-UW42/2020
* USA/WA-UW43/2020
* USA/WA-UW44/2020
* USA/WA-UW45/2020
* USA/WA-UW46/2020
* USA/WA-UW47/2020
* USA/WA-UW48/2020
* USA/WA-UW49/2020
* USA/WA-UW50/2020
* USA/WA-UW51/2020
* USA/WA-UW52/2020
* USA/WA-UW53/2020
* USA/WA-UW54/2020
* USA/WA-UW55/2020
* USA/WA-UW56/2020
* USA/WA-UW57/2020
* USA/WA-UW58/2020
* USA/WA-UW59/2020
* USA/WA-UW60/2020
* USA/WA-UW61/2020
* USA/WA-UW62/2020
* USA/WA-UW63/2020
* USA/WA-UW64/2020
* USA/WA-UW65/2020
* USA/WA-UW66/2020
* USA/WA-UW67/2020
* USA/WA-UW68/2020
* USA/WA-UW69/2020
* USA/WA-UW70/2020
* USA/WA-UW71/2020
* USA/WA-UW72/2020
* USA/WA-UW73/2020
* USA/WA-UW74/2020
* USA/WA-UW75/2020
* USA/WA-UW76/2020
* USA/WA-UW77/2020
* USA/WA-UW78/2020
* USA/WA-UW79/2020
* USA/WA-UW80/2020
* USA/WA-UW81/2020
* USA/WA-UW82/2020
* USA/WA-UW83/2020
* USA/WA-UW84/2020
* USA/WA-UW85/2020
* USA/WA-UW86/2020
* USA/WA-UW87/2020
* USA/WA-UW88/2020
* USA/WA-UW89/2020
* USA/WA-UW90/2020
* USA/WA-UW91/2020
* USA/WA-UW92/2020
* USA/WA-UW93/2020
* USA/WA-UW94/2020
* USA/WA-UW95/2020
* USA/WA-UW96/2020
* USA/WA-UW97/2020
* USA/WA-UW98/2020
* USA/WA-UW99/2020
* USA/WA11-UW7/2020
* USA/WA12-UW8/2020
* USA/WA13-UW9/2020
* USA/WA14-UW10/2020
* USA/WA15-UW11/2020
* USA/WA16-UW12/2020
* USA/WA17-UW13/2020
* USA/WA18-UW14/2020
* Union Hospital of Tongji Medical College, Huazhong University of Science and Technology
* Wuhan/HBCDC-HB-03/2020
* Wuhan/HBCDC-HB-04/2020
* University of Wisconsin-Madison AIDS Vaccine Research Laboratories
* USA/WI-03/2020
* USA/WI-05/2020
* USA/WI-06/2020
* USA/WI-07/2020
* USA/WI-08/2020
* USA/WI-09/2020
* USA/WI-10/2020
* USA/WI4/2020
* University of Wisconsin-Madison AIDS Vaccine Research Laboratory
* USA/WI-02/2020
* Unknown
* France/BFC2094/2020
* Netherlands/Coevorden_1363618/2020
* Utah Public Health Laboratory
* USA/UPHL-01/2020
* USA/UPHL-03/2020
* USA/UPHL-04/2020
* USA/UPHL-05/2020
* USA/UPHL-06/2020
* USA/UT-00008/2020
* USA/UT-00009/2020
* USA/UT-00020/2020
* Valley Medical Center
* USA/WA8-UW5/2020
* Victorian Infectious Diseases Reference Laboratory (VIDRL)
* Australia/VIC02/2020
* Australia/VIC03/2020
* Australia/VIC04/2020
* Australia/VIC05/2020
* Australia/VIC06/2020
* Australia/VIC07/2020
* Australia/VIC08/2020
* Australia/VIC09/2020
* Australia/VIC10/2020
* Australia/VIC11/2020
* Australia/VIC12/2020
* Viral Respiratory Lab, National Institute for Biomedical Research (INRB)
* Congo/KN-0017/2020
* Congo/KN-0038/2020
* Congo/KN-0043/2020
* Congo/KN-0051/2020
* Congo/KN-0054/2020
* Congo/KN-0058/2020
* Congo/KN-0059/2020
* Congo/KN-0060/2020
* Congo/KN-0070/2020
* Congo/KN-0072/2020
* Congo/KN-13/2020
* ViroGenetics - BSL3 Laboratory of Virology; Human Genome Variation Research Group & Genomics Centre MCB; Bioinformatics Research Group Department of Virology
* Poland/PL_P1/2020
* Virological Research Group, Szentagothai Research Centre
* Hungary/49/2020
* Virological Research Group, Szentagothai Research Centre, University of Pecs
* Hungary/mbl1/2020
* Virology Department, Royal Infirmary of Edinburgh, NHS Lothian
* Scotland/EDB003/2020
* Scotland/EDB004/2020
* Scotland/EDB005/2020
* Scotland/EDB006/2020
* Scotland/EDB007/2020
* Scotland/EDB008/2020
* Scotland/EDB009/2020
* Scotland/EDB011/2020
* Scotland/EDB012/2020
* Scotland/EDB013/2020
* Virology Department, Sheffield Teaching Hospitals NHS Foundation Trust
* England/SHEF-BFCB1/2020
* England/SHEF-BFCC0/2020
* England/SHEF-BFCDF/2020
* England/SHEF-BFCEE/2020
* England/SHEF-BFCFD/2020
* England/SHEF-BFD09/2020
* England/SHEF-BFD18/2020
* England/SHEF-BFD27/2020
* England/SHEF-BFD36/2020
* England/SHEF-BFD45/2020
* England/SHEF-BFD54/2020
* England/Sheff01/2020
* England/Sheff02/2020
* Virology Unit, Institut Pasteur du Cambodge.
* Cambodia/0012/2020
* Virology laboratory Ministry of Health Kuwait sequenced at Dasman Diabetes Institute
* Kuwait/KU12/2020
* WA State Department of Health
* USA/WA1-A12/2020
* WHO National Influenza Centre Russian Federation
* Russia/StPetersburg-3524/2020
* Wales Specialist Virology Centre
* Wales/PHW03/2020
* Wales/PHW04/2020
* Wales/PHW05/2020
* Wales/PHW06/2020
* Wales/PHW07/2020
* Wales/PHW09/2020
* Wales/PHW1/2020
* Wales/PHW10/2020
* Wales/PHW12/2020
* Wales/PHW13/2020
* Wales/PHW17/2020
* Wales/PHW18/2020
* Wales/PHW2/2020
* Wales/PHW21/2020
* Wales/PHW25/2020
* Wales/PHW26/2020
* Wales/PHW27/2020
* Wales/PHW28/2020
* Wales/PHW29/2020
* Wales/PHW32/2020
* Wales/PHW33/2020
* Wales/PHW35/2020
* Wales/PHW37/2020
* Wales/PHW38/2020
* Washington State Department of Health
* USA/WA-S100/2020
* USA/WA-S101/2020
* USA/WA-S102/2020
* USA/WA-S103/2020
* USA/WA-S104/2020
* USA/WA-S105/2020
* USA/WA-S106/2020
* USA/WA-S107/2020
* USA/WA-S108/2020
* USA/WA-S109/2020
* USA/WA-S113/2020
* USA/WA-S114/2020
* USA/WA-S115/2020
* USA/WA-S116/2020
* USA/WA-S117/2020
* USA/WA-S118/2020
* USA/WA-S119/2020
* USA/WA-S12/2020
* USA/WA-S120/2020
* USA/WA-S121/2020
* USA/WA-S122/2020
* USA/WA-S13/2020
* USA/WA-S14/2020
* USA/WA-S15/2020
* USA/WA-S16/2020
* USA/WA-S17/2020
* USA/WA-S18/2020
* USA/WA-S19/2020
* USA/WA-S20/2020
* USA/WA-S21/2020
* USA/WA-S22/2020
* USA/WA-S23/2020
* USA/WA-S24/2020
* USA/WA-S25/2020
* USA/WA-S26/2020
* USA/WA-S27/2020
* USA/WA-S28/2020
* USA/WA-S29/2020
* USA/WA-S30/2020
* USA/WA-S31/2020
* USA/WA-S32/2020
* USA/WA-S33/2020
* USA/WA-S34/2020
* USA/WA-S35/2020
* USA/WA-S36/2020
* USA/WA-S37/2020
* USA/WA-S38/2020
* USA/WA-S39/2020
* USA/WA-S40/2020
* USA/WA-S41/2020
* USA/WA-S42/2020
* USA/WA-S43/2020
* USA/WA-S44/2020
* USA/WA-S45/2020
* USA/WA-S46/2020
* USA/WA-S47/2020
* USA/WA-S48/2020
* USA/WA-S49/2020
* USA/WA-S50/2020
* USA/WA-S51/2020
* USA/WA-S52/2020
* USA/WA-S53/2020
* USA/WA-S54/2020
* USA/WA-S55/2020
* USA/WA-S56/2020
* USA/WA-S57/2020
* USA/WA-S58/2020
* USA/WA-S59/2020
* USA/WA-S60/2020
* USA/WA-S61/2020
* USA/WA-S62/2020
* USA/WA-S63/2020
* USA/WA-S64/2020
* USA/WA-S65/2020
* USA/WA-S66/2020
* USA/WA-S67/2020
* USA/WA-S68/2020
* USA/WA-S69/2020
* USA/WA-S70/2020
* USA/WA-S71/2020
* USA/WA-S72/2020
* USA/WA-S73/2020
* USA/WA-S74/2020
* USA/WA-S75/2020
* USA/WA-S76/2020
* USA/WA-S77/2020
* USA/WA-S78/2020
* USA/WA-S79/2020
* USA/WA-S80/2020
* USA/WA-S81/2020
* USA/WA-S82/2020
* USA/WA-S83/2020
* USA/WA-S84/2020
* USA/WA-S85/2020
* USA/WA-S86/2020
* USA/WA-S87/2020
* USA/WA-S88/2020
* USA/WA-S89/2020
* USA/WA-S90/2020
* USA/WA-S91/2020
* USA/WA-S92/2020
* USA/WA-S93/2020
* USA/WA-S94/2020
* USA/WA-S95/2020
* USA/WA-S96/2020
* USA/WA-S97/2020
* USA/WA-S98/2020
* USA/WA-S99/2020
* USA/WA1-F6/2020
* USA/WA2/2020
* Washington State Public Health Lab
* USA/WA4-UW2/2020
* USA/WA6-UW3/2020
* USA/WA7-UW4/2020
* Weifang Center for Disease Control and Prevention
* China/WF0001/2020
* China/WF0002/2020
* China/WF0003/2020
* China/WF0004/2020
* China/WF0006/2020
* China/WF0009/2020
* China/WF0012/2020
* China/WF0014/2020
* China/WF0015/2020
* China/WF0016/2020
* China/WF0017/2020
* China/WF0018/2020
* China/WF0019/2020
* China/WF0020/2020
* China/WF0021/2020
* China/WF0023/2020
* China/WF0024/2020
* China/WF0026/2020
* China/WF0028/2020
* China/WF0029/2020
* Wellington Hospital
* NewZealand/20VR0275/2020
* NewZealand/20VR0276/2020
* West of Scotland Specialist Virology Centre, NHSGGC
* Scotland/CVR01/2020
* Scotland/CVR02/2020
* Scotland/CVR03/2020
* Scotland/CVR04/2020
* Scotland/CVR05/2020
* Scotland/CVR06/2020
* Scotland/CVR07/2020
* Scotland/CVR10/2020
* Wisconsin Department of Health Services
* USA/WI1/2020
* Wuhan Fourth Hospital
* Wuhan/WH05/2020
* Wuhan Institute of Virology, Chinese Academy of Sciences
* bat/Yunnan/RaTG13/2013
* Wuhan Jinyintan Hospital
* Wuhan/HBCDC-HB-01/2019
* Wuhan/HBCDC-HB-02/2019
* Wuhan/HBCDC-HB-03/2019
* Wuhan/HBCDC-HB-04/2019
* Wuhan/WIV02/2019
* Wuhan/WIV04/2019
* Wuhan/WIV05/2019
* Wuhan/WIV06/2019
* Wuhan/WIV07/2019
* Wuhan Lung Hospital
* Wuhan/HBCDC-HB-06/2020
* Yale Clinical Virology Laboratory
* USA/CT-Yale-006/2020
* USA/CT-Yale-007/2020
* USA/CT-Yale-008/2020
* USA/CT-Yale-009/2020
* USA/CT-Yale-010/2020
* Yongchuan District Center for Disease Control and Prevention
* Chongqing/YC01/2020
* Zhejiang Provincial Center for Disease Control and Prevention
* Zhejiang/WZ-01/2020
* Zhejiang/WZ-02/2020
* Zhongxian Center for Disease Control and Prevention
* Chongqing/ZX01/2020