From c2dd9f53e9f417ebbec075895d1aee26bb50efa1 Mon Sep 17 00:00:00 2001 From: ibevers Date: Mon, 16 Sep 2024 14:59:48 -0400 Subject: [PATCH] Update phenotype descriptions --- .../phenotype/adhd.json | 40 +- .../phenotype/airwaystenosis.json | 56 +- .../phenotype/als.json | 68 +- .../phenotype/alzheimers.json | 64 +- .../phenotype/benignLesion.json | 46 +- .../phenotype/bipolar.json | 14 +- .../phenotype/confounders.json | 328 ++++---- .../phenotype/customAffectScale.json | 30 +- .../phenotype/demographics.json | 110 +-- .../phenotype/depression.json | 16 +- .../phenotype/dsm5.json | 80 +- .../phenotype/dyspnea.json | 24 +- .../phenotype/eligibility.json | 68 +- .../phenotype/enrollment.json | 58 +- .../phenotype/gad7.json | 18 +- .../phenotype/laryngealCancer.json | 88 +- .../phenotype/laryngealDystonia.json | 78 +- .../phenotype/leicester.json | 42 +- .../phenotype/panas.json | 24 +- .../phenotype/parkinsons.json | 90 +- .../phenotype/participant.json | 785 +++++++++--------- .../phenotype/phq9.json | 22 +- .../phenotype/precancerousLesions.json | 78 +- .../phenotype/ptsd.json | 24 +- .../phenotype/random.json | 8 +- .../phenotype/stroop.json | 96 +-- .../phenotype/vhi10.json | 24 +- .../phenotype/vocab.json | 30 +- .../phenotype/vocalFoldParalysis.json | 51 +- .../phenotype/voicePerception.json | 6 +- .../phenotype/voiceSeverity.json | 6 +- .../phenotype/winograd.json | 625 +++++++++----- src/b2aiprep/prepare/utils.py | 48 ++ 33 files changed, 1676 insertions(+), 1469 deletions(-) diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/adhd.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/adhd.json index 0ef0d76..e1dc303 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/adhd.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/adhd.json @@ -1,62 +1,62 @@ { "adhd_session_id": { - "description": "" + "description": "Unique identifier for the ADHD session." }, "adhd_duration": { - "description": "" + "description": "Duration of ADHD-related assessments." }, "wrapping_up": { - "description": "" + "description": "Indicates if the session is nearing completion." }, "things_in_order": { - "description": "" + "description": "Indicates if the participant prefers to keep things in order." }, "remembering_appt": { - "description": "" + "description": "Reports if the participant has trouble remembering appointments." }, "avoidance": { - "description": "" + "description": "Indicates if the participant avoids reminders of stressful or traumatic events." }, "fidget": { - "description": "" + "description": "Indicates if the participant is fidgeting during the session." }, "overly_active": { - "description": "" + "description": "Indicates if the participant is overly active or restless." }, "careless": { - "description": "" + "description": "Indicates if the participant feels careless about their actions or responsibilities." }, "difficulty_attention": { - "description": "" + "description": "Indicates if the participant has difficulty paying attention." }, "difficulty_concentrating": { - "description": "" + "description": "Indicates if the participant has difficulty concentrating." }, "misplace": { - "description": "" + "description": "Indicates if the participant often misplaces things." }, "distracted": { - "description": "" + "description": "Indicates if the participant feels distracted during the session." }, "remain_seated": { - "description": "" + "description": "Indicates if the participant is able to remain seated for long periods." }, "restless": { - "description": "" + "description": "Indicates if the participant feels restless." }, "difficulty_unwinding": { - "description": "" + "description": "Indicates if the participant has difficulty unwinding or relaxing after stressful events." }, "talking_too_much": { - "description": "" + "description": "Indicates if the participant feels they are talking too much." }, "finish_other_sent": { - "description": "" + "description": "Indicates if the participant finishes others' sentences." }, "difficulty_waiting": { - "description": "" + "description": "Indicates if the participant has difficulty waiting for others." }, "interrupt_others": { - "description": "" + "description": "Indicates if the participant tends to interrupt others during conversations." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/airwaystenosis.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/airwaystenosis.json index 8619a04..7742415 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/airwaystenosis.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/airwaystenosis.json @@ -1,86 +1,86 @@ { "diagnosis_as_pft": { - "description": "" + "description": "Indicates if the participant has undergone pulmonary function testing in the past three months." }, "diagnosis_as_gsd": { - "description": "" + "description": "Indicates if the participant has airway stenosis confirmed by laryngoscopy, bronchoscopy, or CT imaging." }, "diagnosis_as_gsd_yes___bronchoscopy": { - "description": "" + "description": "Indicates if the participant’s airway stenosis was confirmed by bronchoscopy or laryngoscopy." }, "diagnosis_as_gsd_yes___ct": { - "description": "" + "description": "Indicates if the participant’s airway stenosis was confirmed by CT imaging." }, "diagnosis_as_ds": { - "description": "" + "description": "Specifies the subtype of the participant’s airway stenosis." }, "diagnosis_as_ds_bvfi_gs": { - "description": "" + "description": "Indicates if the participant has bilateral vocal fold immobility or glottic stenosis as a subtype of airway stenosis." }, "diagnosis_as_etiology": { - "description": "" + "description": "Specifies the etiology or cause of the participant’s airway stenosis." }, "diagnosis_as_etiology_auto_immune": { - "description": "" + "description": "Indicates if the participant’s airway stenosis is caused by an autoimmune or granulomatous disease." }, "diagnosis_as_ds_mcg": { - "description": "" + "description": "Indicates the degree of the participant’s stenosis based on the Myer-Cotton Grade." }, "diagnosis_as_ds_bc": { - "description": "" + "description": "Indicates the degree of the participant’s stenosis based on the Bogdasarian Classification." }, "diagnosis_as_ds_agw": { - "description": "" + "description": "Indicates the anterior glottic web classification of the participant’s airway stenosis according to Cohen." }, "diagnosis_as_ds_ac": { - "description": "" + "description": "Indicates the grade of stenosis of the participant’s supraglottic stenosis according to the Aziz Classification." }, "diagnosis_as_ds_ac_grade_4": { - "description": "" + "description": "Indicates the grade of supraglottic stenosis based on the Aziz Classification." }, "diagnosis_as_ds_ods": { - "description": "" + "description": "Indicates the overall subjective classification of the participant’s airway stenosis." }, "diagnosis_as_ds_eps": { - "description": "" + "description": "Indicates the estimated percentage of stenosis from 0 to 100." }, "diagnosis_as_treatment___no_treatment": { - "description": "" + "description": "Indicates if the participant has received no treatment for their airway stenosis." }, "diagnosis_as_treatment___surgery": { - "description": "" + "description": "Indicates if the participant has undergone surgery as treatment for their airway stenosis." }, "diagnosis_as_treatment___in_office_treatment": { - "description": "" + "description": "Indicates if the participant has undergone in-office treatment for their airway stenosis." }, "diagnosis_as_treatment_surgery___endoscopic_intervention": { - "description": "" + "description": "Indicates if the participant has undergone endoscopic intervention with laser and balloon dilation and steroid injection as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___endoscopic_excision": { - "description": "" + "description": "Indicates if the participant has undergone endoscopic laser wedge excision with balloon dilation and steroid injection as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___laryngotracheal_reconstruction": { - "description": "" + "description": "Indicates if the participant has undergone open laryngotracheal reconstruction as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___laryngotracheoplasty": { - "description": "" + "description": "Indicates if the participant has undergone laryngotracheoplasty (Maddern procedure) as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___tracheostomy": { - "description": "" + "description": "Indicates if the participant has undergone a tracheostomy as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___other": { - "description": "" + "description": "Indicates if the participant has undergone another type of surgery for airway stenosis." }, "diagnosis_as_treatment_in_office___steroid_injections_sole": { - "description": "" + "description": "Indicates if the participant has undergone awake steroid injection(s) as the sole treatment for airway stenosis." }, "diagnosis_as_treatment_in_office___steroid_injections_adjunct": { - "description": "" + "description": "Indicates if the participant has undergone awake steroid injection(s) as an adjunct treatment for airway stenosis." }, "diagnosis_as_treatment_in_office___dilation": { - "description": "" + "description": "Indicates if the participant has undergone in-office or awake dilation as treatment for airway stenosis." }, "diagnosis_as_treatment_in_office___laser": { - "description": "" + "description": "Indicates if the participant has undergone in-office or awake laser treatment for airway stenosis." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/als.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/als.json index b31e171..69c0e45 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/als.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/als.json @@ -1,104 +1,104 @@ { "diagnosis_als_gsd_category_1": { - "description": "" + "description": "Indicates the participant's ALS diagnosis under GSD category 1." }, "diagnosis_als_gsd_category_2": { - "description": "" + "description": "Indicates if the participant meets the criteria for ALS GSD Category 2." }, "diagnosis_als_gsd_category_3": { - "description": "" + "description": "Indicates the participant's ALS diagnosis under GSD category 3." }, "diagnosis_als_gsd_calculation": { - "description": "" + "description": "Calculation for the participant's ALS GSD diagnosis." }, "diagnosis_als_disease_subtype": { - "description": "" + "description": "Indicates the subtype of ALS diagnosed in the participant." }, "diagnosis_als_disease_subtype_familial": { - "description": "" + "description": "Indicates if the participant has been diagnosed with familial ALS." }, "diagnosis_als_etiology___genetic_factors": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to genetic factors." }, "diagnosis_als_etiology___environmental_factors": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to environmental factors." }, "diagnosis_als_etiology_genetic_factors___c9orf72": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to the C9orf72 genetic factor." }, "diagnosis_als_etiology_genetic_factors___sod1": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to the SOD1 genetic factor." }, "diagnosis_als_etiology_genetic_factors___other": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to other genetic factors not listed." }, "diagnosis_als_cp___upper_motor_neuron": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis includes upper motor neuron involvement." }, "diagnosis_als_cp___lower_motor_neuron": { - "description": "" + "description": "Indicates if the participant has lower motor neuron involvement as part of their ALS diagnosis." }, "diagnosis_als_cp___bulbar_symptoms": { - "description": "" + "description": "Indicates if the participant has bulbar symptoms as part of their ALS diagnosis." }, "diagnosis_als_cp___respiratory_involvement": { - "description": "" + "description": "Indicates if the participant has respiratory involvement as part of their ALS diagnosis." }, "diagnosis_als_dp": { - "description": "" + "description": "Indicates if the participant has a diagnosis of ALS with dementia." }, "diagnosis_als_na_alsfrs_r_score": { - "description": "" + "description": "The participant's score on the ALS Functional Rating Scale-Revised (ALSFRS-R)." }, "diagnosis_als_na_fvc_percentage": { - "description": "" + "description": "Indicates the participant's forced vital capacity (FVC) percentage for ALS diagnosis." }, "diagnosis_als_treatment_and_management": { - "description": "" + "description": "Indicates the treatment and management plan for the participant's ALS diagnosis." }, "diagnosis_als_treatment_and_management_yes___medications": { - "description": "" + "description": "Indicates if the participant is receiving medications as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes___supportive_care": { - "description": "" + "description": "Indicates if the participant is receiving supportive care as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_medications___riluzole": { - "description": "" + "description": "Indicates if the participant is receiving riluzole as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_medications___edaravone": { - "description": "" + "description": "Indicates if the participant is receiving edaravone as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_medications___sodium": { - "description": "" + "description": "Indicates if the participant is receiving sodium as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_medications___tofersen": { - "description": "" + "description": "Indicates if the participant is receiving Tofersen as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_medications___symptomatic_treatment": { - "description": "" + "description": "Indicates if the participant is receiving symptomatic treatment as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_medications___other": { - "description": "" + "description": "Indicates if the participant is receiving other medications as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_supportive_care___physical_therapy": { - "description": "" + "description": "Indicates if the participant has received physical therapy as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___occupational_therapy": { - "description": "" + "description": "Indicates if the participant is receiving occupational therapy as part of ALS treatment and supportive care." }, "diagnosis_als_treatment_and_management_yes_supportive_care___speech_therapy": { - "description": "" + "description": "Indicates if the participant has received speech therapy as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___respiratory_support": { - "description": "" + "description": "Indicates if the participant has received respiratory support as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___nutrition_support": { - "description": "" + "description": "Indicates if the participant has received nutrition support as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___psychotherapy": { - "description": "" + "description": "Indicates if the participant has received psychotherapy as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___other": { - "description": "" + "description": "Indicates if the participant has received other forms of supportive care for ALS." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/alzheimers.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/alzheimers.json index 4f1f7d3..e14f270 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/alzheimers.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/alzheimers.json @@ -1,98 +1,98 @@ { "diagnosis_alz_dementia_mci_causes": { - "description": "" + "description": "Indicates if other causes of cognitive or functional changes have been excluded in the participant’s diagnosis." }, "diagnosis_alz_dementia_mci_dt": { - "description": "" + "description": "Specifies the type of dementia or cognitive impairment in the participant." }, "diagnosis_alz_dementia_mci_etiology___genetic_factors": { - "description": "" + "description": "Indicates if genetic factors are suspected or known to be the etiology of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology___age_related_changes": { - "description": "" + "description": "Indicates if age-related changes are suspected or known to be the etiology of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology___other_medical_conditions": { - "description": "" + "description": "Indicates if other medical conditions, such as vascular factors or traumatic brain injury, are suspected or known to be the etiology of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology___substance_related": { - "description": "" + "description": "Indicates if substance-related factors, such as alcohol-induced cognitive impairment, are suspected or known to be the etiology of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology___other": { - "description": "" + "description": "Indicates if another etiology is suspected or known to be the cause of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology_gf___familial_alzheimers_disease": { - "description": "" + "description": "Indicates if familial Alzheimer’s disease is the genetic factor suspected or known to be the cause of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology_gf___apolipoprotein_e": { - "description": "" + "description": "Indicates if apolipoprotein E (APOE) ε4 allele is the genetic factor suspected or known to be the cause of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology_gf___other_genetic_factors": { - "description": "" + "description": "Indicates if other genetic factors are suspected or known to be the cause of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_ds___mci": { - "description": "" + "description": "Indicates if the participant’s cognitive impairment is classified as mild cognitive impairment (MCI)." }, "diagnosis_alz_dementia_mci_ds___cdr": { - "description": "" + "description": "Indicates if the participant’s cognitive impairment is classified using the Clinical Dementia Rating (CDR) staging." }, "diagnosis_alz_dementia_mci_ds_cdr": { - "description": "" + "description": "Specifies the participant’s Clinical Dementia Rating (CDR) staging." }, "diagnosis_alz_dementia_mci_ca_rudas_score": { - "description": "" + "description": "Specifies the participant’s Rowland Universal Dementia Assessment Scale (RUDAS) score." }, "diagnosis_alz_dementia_mci_ca_mmse_score": { - "description": "" + "description": "Specifies the participant’s Mini-Mental State Examination (MMSE) score." }, "diagnosis_alz_dementia_mci_ca_moca_score": { - "description": "" + "description": "Specifies the participant’s Montreal Cognitive Assessment (MoCA) score." }, "diagnosis_alz_dementia_mci_ca_adas_cog_score": { - "description": "" + "description": "Specifies the participant’s Alzheimer’s Disease Assessment Scale-Cognitive Subscale (ADAS-Cog) score." }, "diagnosis_alz_dementia_mci_ca_other": { - "description": "" + "description": "Specifies if another cognitive assessment tool was used for the participant." }, "diagnosis_alz_dementia_mci_ca_other_score": { - "description": "" + "description": "Specifies the score from another cognitive assessment tool used for the participant." }, "diagnosis_alz_dementia_mci_treatment_obtained": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for Alzheimer’s disease, cognitive impairment, or other types of dementia." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes___medications": { - "description": "" + "description": "Indicates if the participant has taken medications as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes___npi": { - "description": "" + "description": "Indicates if the participant has received non-pharmacological interventions as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_medications___cholinesterase_inhibitors": { - "description": "" + "description": "Indicates if the participant has taken cholinesterase inhibitors, such as Donepezil, as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_medications___nmda_receptor_antagonist": { - "description": "" + "description": "Indicates if the participant has taken NMDA receptor antagonist, such as Memantine, as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_medications___other": { - "description": "" + "description": "Indicates if the participant has taken other medications as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___day_program": { - "description": "" + "description": "Indicates if the participant has participated in a day program as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___cognitive_simulation_therapy": { - "description": "" + "description": "Indicates if the participant has undergone cognitive stimulation therapy as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___reality_orientation_therapy": { - "description": "" + "description": "Indicates if the participant has undergone reality orientation therapy as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___reminiscence_therapy": { - "description": "" + "description": "Indicates if the participant has undergone reminiscence therapy as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___physical_exercise_program": { - "description": "" + "description": "Indicates if the participant has participated in a physical exercise program as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___dietary_modifications": { - "description": "" + "description": "Indicates if the participant has undergone dietary modifications as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___other": { - "description": "" + "description": "Indicates if the participant has undergone other non-pharmacological interventions for Alzheimer’s disease or cognitive impairment." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/benignLesion.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/benignLesion.json index e6cbb3e..bf2962e 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/benignLesion.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/benignLesion.json @@ -1,71 +1,71 @@ { "diagnois_bl_gsd": { - "description": "" + "description": "Indicates if the participant has a benign lesion confirmed by laryngoscopy or stroboscopy." }, "diagnosis_bl_ds": { - "description": "" + "description": "Indicates the participant’s diagnosis of a benign lesion." }, "diagnosis_bl_etiology": { - "description": "" + "description": "Specifies the etiology or cause of the participant’s benign lesion." }, "diagnosis_bl_ds_ll": { - "description": "" + "description": "Indicates the location of the participant’s benign lesion." }, "diagnosis_bl_degree_os_1": { - "description": "" + "description": "Indicates the overall severity of the participant’s benign lesion." }, "diagnosis_bl_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the overall severity of the participant’s benign lesion." }, "diagnosis_bl_degree_r_1": { - "description": "" + "description": "Indicates the roughness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_b_1": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_s_1": { - "description": "" + "description": "Indicates the strain in the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_p_1": { - "description": "" + "description": "Indicates the pitch of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_l_1": { - "description": "" + "description": "Indicates the loudness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_comments": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice due to the benign lesion." }, "diagnosis_bl_treatment": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for the benign lesion." }, "diagnosis_bl_treatment_select___voice_or_speech_therapy": { - "description": "" + "description": "Indicates if the participant has undergone voice or speech therapy as treatment for the benign lesion." }, "diagnosis_bl_treatment_select___laryngeal_microsurgery": { - "description": "" + "description": "Indicates if the participant has undergone laryngeal microsurgery as treatment for the benign lesion." }, "diagnosis_bl_treatment_select___voice_rest": { - "description": "" + "description": "Indicates if the participant has undergone voice rest as treatment for the benign lesion." }, "diagnosis_bl_treatment_select___other": { - "description": "" + "description": "Indicates if the participant has undergone other treatments for the benign lesion." }, "diagnosis_bl_treatment_lm": { - "description": "" + "description": "Indicates if the participant has undergone laryngeal microsurgery for the benign lesion." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/bipolar.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/bipolar.json index 1105ff4..2083394 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/bipolar.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/bipolar.json @@ -1,23 +1,23 @@ { "diagnosis_bipolar_gsd": { - "description": "" + "description": "Specifies the participant’s diagnosis of bipolar disorder." }, "diagnosis_bipolar_gsd_interview": { - "description": "" + "description": "Indicates if a structured clinical interview was conducted for diagnosing the participant’s bipolar disorder." }, "diagnosis_bipolar_gsd_oqu": { - "description": "" + "description": "Indicates if an objective questionnaire was used in the diagnosis of the participant’s bipolar disorder." }, "diagnosis_bipolar_gsd_oquw": { - "description": "" + "description": "Specifies which objective questionnaire was used in diagnosing the participant’s bipolar disorder." }, "diagnosis_bipolar_subtype_active": { - "description": "" + "description": "Specifies the active subtype of the participant’s bipolar disorder." }, "diagnosis_bipolar_psychotic": { - "description": "" + "description": "Indicates if the participant has psychotic symptoms associated with bipolar disorder." }, "diagnosis_bipolar_severity": { - "description": "" + "description": "Indicates the severity of the participant’s bipolar disorder." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/confounders.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/confounders.json index 0b1a8b3..f04652c 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/confounders.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/confounders.json @@ -1,494 +1,494 @@ { "confounders_session_id": { - "description": "" + "description": "Unique identifier for the confounders assessment session." }, "confounders_duration": { - "description": "" + "description": "Total duration of the confounders assessment." }, "is_regular_smoker": { - "description": "" + "description": "Indicates if the participant is a regular smoker." }, "smoking_hx": { - "description": "" + "description": "Indicates the participant's smoking history." }, "age_start_smoking": { - "description": "" + "description": "Indicates the age at which the participant started smoking." }, "age_stop_smoking": { - "description": "" + "description": "Indicates the age at which the participant stopped smoking." }, "smoking_types___1": { - "description": "" + "description": "Reports if the participant has used smoking type 1." }, "smoking_types___2": { - "description": "" + "description": "Indicates if the participant smokes cigars." }, "smoking_types___3": { - "description": "" + "description": "Indicates if the participant smokes pipes." }, "smoking_types___4": { - "description": "" + "description": "Indicates if the participant uses chewing tobacco." }, "smoking_types___5": { - "description": "" + "description": "Indicates if the participant uses cigars." }, "smoking_types___6": { - "description": "" + "description": "Indicates if the participant uses snuff." }, "smoking_types___7": { - "description": "" + "description": "Reports if the participant has used smoking type 7." }, "smoking_types___8": { - "description": "" + "description": "Indicates if the participant uses other forms of tobacco, such as e-cigarettes." }, "smoking_freq": { - "description": "" + "description": "Indicates how often the participant smokes." }, "alcohol_yn": { - "description": "" + "description": "Indicates if the participant consumes alcohol." }, "alcohol_freq": { - "description": "" + "description": "Indicates how often the participant consumes alcohol." }, "alcohol_amt": { - "description": "" + "description": "Reports the amount of alcohol the participant consumed." }, "alcohol_drinks": { - "description": "" + "description": "The number of alcoholic drinks the participant typically consumes." }, "alcohol_today": { - "description": "" + "description": "Reports if the participant consumed alcohol today." }, "drinks_today_number": { - "description": "" + "description": "The number of alcoholic drinks the participant has consumed today." }, "alcohol_rehab": { - "description": "" + "description": "Indicates if the participant has undergone rehabilitation for alcohol use." }, "current_recovery_alcohol": { - "description": "" + "description": "Indicates if the participant is currently in recovery for alcohol use." }, "caffeine_intake": { - "description": "" + "description": "Reports the participant's caffeine intake." }, "caffeine_intake_today": { - "description": "" + "description": "The amount of caffeine the participant has consumed today." }, "hydration": { - "description": "" + "description": "Indicates if the participant feels hydrated." }, "hydration_today": { - "description": "" + "description": "Indicates if the participant feels adequately hydrated today." }, "dental_problems": { - "description": "" + "description": "Indicates if the participant has dental problems or issues." }, "seasonal_allergies": { - "description": "" + "description": "Indicates if the participant has any seasonal allergies." }, "seasonal_allergies_options___1": { - "description": "" + "description": "Indicates if the participant has seasonal allergies to tree pollen." }, "seasonal_allergies_options___2": { - "description": "" + "description": "Indicates if the participant has seasonal allergies to specific allergens listed under option 2." }, "seasonal_allergies_options___3": { - "description": "" + "description": "Indicates if the participant has seasonal allergies to grass pollen." }, "seasonal_allergies_options___4": { - "description": "" + "description": "Indicates if the participant has seasonal allergies to pollen or other triggers." }, "tired_measure": { - "description": "" + "description": "Indicates if the participant feels tired or fatigued." }, "height": { - "description": "" + "description": "The participant's height in centimeters or inches." }, "weight": { - "description": "" + "description": "The participant's weight in kilograms or pounds." }, "unit": { - "description": "" + "description": "The measurement unit used for the participant's responses (e.g., kilograms or pounds)." }, "symptoms___1": { - "description": "" + "description": "Indicates if the participant reports experiencing symptom 1." }, "symptoms___2": { - "description": "" + "description": "Indicates if the participant reports experiencing symptom 2." }, "symptoms___3": { - "description": "" + "description": "Indicates if the participant reports experiencing symptom 3." }, "symptoms___4": { - "description": "" + "description": "Indicates if the participant is experiencing symptom 4 as part of their health assessment." }, "symptoms___5": { - "description": "" + "description": "Indicates if the participant reports experiencing symptom 5." }, "symptoms___6": { - "description": "" + "description": "Indicates if the participant reports experiencing symptom 6." }, "symptoms___7": { - "description": "" + "description": "Indicates if the participant reports experiencing symptom 7." }, "ear_med_history___1": { - "description": "" + "description": "Indicates if the participant has a history of ear-related medical conditions." }, "ear_med_history___2": { - "description": "" + "description": "Indicates if the participant has a history of hearing loss." }, "ear_med_history___3": { - "description": "" + "description": "Indicates if the participant has a history of ear-related medical condition 3." }, "nose_med_history___1": { - "description": "" + "description": "Indicates if the participant has a history of nose-related medical condition 1." }, "throat_med_history___1": { - "description": "" + "description": "Indicates if the participant has a history of throat-related medical conditions." }, "throat_med_history___2": { - "description": "" + "description": "Indicates if the participant has a history of throat-related medical conditions." }, "throat_med_history___3": { - "description": "" + "description": "Indicates if the participant has a history of throat infections." }, "throat_med_history___4": { - "description": "" + "description": "Indicates if the participant has a history of vocal cord nodules." }, "throat_med_history___5": { - "description": "" + "description": "Indicates if the participant has a history of throat cancer." }, "throat_med_history___6": { - "description": "" + "description": "Indicates if the participant has a history of throat-related medical condition 6." }, "throat_med_history___7": { - "description": "" + "description": "Indicates if the participant has a history of laryngeal cancer." }, "throat_med_history___8": { - "description": "" + "description": "Indicates if the participant has a history of vocal cord paralysis." }, "throat_med_history___9": { - "description": "" + "description": "Indicates if the participant has a history of throat cancer." }, "throat_med_history___10": { - "description": "" + "description": "Indicates if the participant has a history of tracheostomy." }, "head_med_history___1": { - "description": "" + "description": "Indicates if the participant has a history of traumatic brain injury (TBI)." }, "head_med_history___2": { - "description": "" + "description": "Indicates if the participant has a history of brain tumors." }, "ear_surgical___1": { - "description": "" + "description": "Indicates if the participant has undergone surgery for ear infections." }, "ear_surgical___2": { - "description": "" + "description": "Indicates if the participant has undergone surgery for hearing loss." }, "nose_surgical___1": { - "description": "" + "description": "Indicates if the participant has undergone surgery for nasal polyps." }, "nose_surgical___2": { - "description": "" + "description": "Indicates if the participant has undergone surgery for nose-related conditions." }, "throat_surgical___1": { - "description": "" + "description": "Indicates if the participant has undergone throat surgery." }, "throat_surgical___2": { - "description": "" + "description": "Indicates if the participant has undergone surgery for throat polyps." }, "throat_surgical___3": { - "description": "" + "description": "Indicates if the participant has undergone surgery for throat cancer." }, "throat_surgical___4": { - "description": "" + "description": "Indicates if the participant has undergone surgery for vocal cord nodules." }, "head_surgical___1": { - "description": "" + "description": "Indicates if the participant has undergone surgery for traumatic brain injury (TBI)." }, "head_surgical___2": { - "description": "" + "description": "Indicates if the participant has undergone surgery for a head-related condition." }, "neurological_history___1": { - "description": "" + "description": "Indicates if the participant has a history of neurological disorders." }, "neurological_history___2": { - "description": "" + "description": "Indicates if the participant has a history of migraines." }, "neurological_history___3": { - "description": "" + "description": "Indicates if the participant has a history of neurological condition 3." }, "neurological_history___4": { - "description": "" + "description": "Indicates if the participant has a history of epilepsy." }, "neurological_history___5": { - "description": "" + "description": "Indicates if the participant has a history of Alzheimer's disease." }, "neurological_history___6": { - "description": "" + "description": "Indicates if the participant has a history of multiple sclerosis (MS)." }, "current_neuro_dx": { - "description": "" + "description": "Indicates the participant's current neurological diagnosis." }, "respiratory_conditions___1": { - "description": "" + "description": "Indicates if the participant has a diagnosis of bronchitis." }, "respiratory_conditions___2": { - "description": "" + "description": "Indicates if the participant has a diagnosis of asthma." }, "respiratory_conditions___3": { - "description": "" + "description": "Indicates if the participant has a diagnosis of COPD." }, "respiratory_conditions___4": { - "description": "" + "description": "Indicates if the participant has a chronic bronchitis diagnosis." }, "respiratory_conditions___5": { - "description": "" + "description": "Indicates if the participant has a diagnosis of interstitial lung disease." }, "respiratory_conditions___6": { - "description": "" + "description": "Indicates if the participant has a diagnosis of emphysema." }, "respiratory_conditions___7": { - "description": "" + "description": "Indicates if the participant has a diagnosis of sleep apnea." }, "respiratory_conditions___8": { - "description": "" + "description": "Indicates if the participant has been diagnosed with tuberculosis." }, "lung_or_metastatic___1": { - "description": "" + "description": "Indicates if the participant has a diagnosis of lung cancer." }, "lung_or_metastatic___2": { - "description": "" + "description": "Indicates if the participant has a diagnosis of metastatic lung cancer." }, "covid___past_year": { - "description": "" + "description": "Indicates if the participant has had COVID-19 in the past year." }, "covid___long": { - "description": "" + "description": "Reports if the participant has experienced long COVID symptoms." }, "covid_past": { - "description": "" + "description": "Indicates if the participant has had COVID-19 in the past." }, "cpap_conditions___1": { - "description": "" + "description": "Indicates if the participant has used CPAP therapy for obstructive sleep apnea." }, "cpap_conditions___2": { - "description": "" + "description": "Indicates if the participant has used continuous positive airway pressure (CPAP) therapy for sleep apnea." }, "resp_medical_history___1": { - "description": "" + "description": "Indicates if the participant has a history of chronic bronchitis." }, "resp_medical_history___2": { - "description": "" + "description": "Indicates if the participant has a history of asthma." }, "resp_medical_history___3": { - "description": "" + "description": "Indicates if the participant has a history of chronic obstructive pulmonary disease (COPD)." }, "resp_medical_history___4": { - "description": "" + "description": "Indicates if the participant has a history of respiratory condition 4." }, "exposed_environmental_pollution": { - "description": "" + "description": "Indicates if the participant has been exposed to environmental pollution." }, "breathe_today": { - "description": "" + "description": "Indicates if the participant is experiencing difficulty breathing today." }, "breathe_today_difficulty": { - "description": "" + "description": "Reports if the participant experienced breathing difficulty today." }, "cough_today": { - "description": "" + "description": "Indicates if the participant has coughed today." }, "cough_today_severity": { - "description": "" + "description": "Severity of the participant's cough today." }, "circulatory_conditions___1": { - "description": "" + "description": "Indicates if the participant has a diagnosis of cardiovascular disease." }, "circulatory_conditions___2": { - "description": "" + "description": "Indicates if the participant has a circulatory condition categorized as condition 2." }, "circulatory_conditions___3": { - "description": "" + "description": "Indicates if the participant has a diagnosis of heart failure." }, "circulatory_conditions___4": { - "description": "" + "description": "Indicates if the participant has a diagnosis of hypertension." }, "circulatory_conditions___5": { - "description": "" + "description": "Indicates if the participant has a diagnosis of peripheral artery disease." }, "circulatory_conditions___6": { - "description": "" + "description": "Indicates if the participant has a diagnosis of varicose veins." }, "circulatory_med_history___1": { - "description": "" + "description": "Indicates if the participant has a history of heart disease." }, "circulatory_med_history___2": { - "description": "" + "description": "Indicates if the participant has a history of hypertension." }, "circulatory_med_history___3": { - "description": "" + "description": "Indicates if the participant has a history of angina." }, "circulatory_med_history___4": { - "description": "" + "description": "Indicates if the participant has a history of arrhythmia." }, "circulatory_med_history___5": { - "description": "" + "description": "Indicates if the participant has a history of stroke." }, "ph_standing": { - "description": "" + "description": "Indicates if the participant experiences physical health difficulties while standing." }, "ph_take_care": { - "description": "" + "description": "Indicates if the participant has difficulty taking care of themselves due to physical health issues." }, "ph_learn_task": { - "description": "" + "description": "Indicates if the participant has difficulty learning new tasks due to physical health issues." }, "ph_problem_join": { - "description": "" + "description": "Indicates if the participant has problems joining social activities due to physical health." }, "ph_health_problem": { - "description": "" + "description": "Indicates if the participant has a health problem that affects their daily life." }, "ph_concentrating": { - "description": "" + "description": "Indicates if the participant has difficulty concentrating due to physical health issues." }, "ph_walking": { - "description": "" + "description": "Reports if the participant experiences physical health issues while walking." }, "ph_washing": { - "description": "" + "description": "Reports if the participant experiences physical health issues while washing." }, "ph_get_dressed": { - "description": "" + "description": "Indicates if the participant has difficulty getting dressed due to physical health issues." }, "ph_dealing_people": { - "description": "" + "description": "Indicates if the participant has difficulty dealing with people due to physical health issues." }, "ph_friendship": { - "description": "" + "description": "Indicates if the participant has difficulty maintaining friendships due to physical health issues." }, "ph_day_to_day_work": { - "description": "" + "description": "Reports if the participant's physical health affects their day-to-day work." }, "physical_health_freq": { - "description": "" + "description": "Indicates how frequently the participant experiences physical health issues." }, "phys_health_impact": { - "description": "" + "description": "Indicates if the participant's physical health impacts their daily life." }, "phys_health_limited": { - "description": "" + "description": "Indicates if the participant's physical health is limiting their daily activities." }, "medications___1": { - "description": "" + "description": "Indicates if the participant is currently taking medication 1." }, "medications___2": { - "description": "" + "description": "Indicates if the participant is taking medication 2." }, "medications___3": { - "description": "" + "description": "Indicates if the participant is taking medication 3." }, "medications___4": { - "description": "" + "description": "Indicates if the participant is taking medication 4." }, "medications___5": { - "description": "" + "description": "Indicates if the participant is taking medication 5." }, "medications___6": { - "description": "" + "description": "Indicates if the participant is taking medication 6." }, "medications___7": { - "description": "" + "description": "Indicates if the participant is taking medication 7." }, "medications___8": { - "description": "" + "description": "Indicates if the participant is taking medication 8." }, "medications___9": { - "description": "" + "description": "Indicates if the participant is taking medication 9." }, "medications___10": { - "description": "" + "description": "Indicates if the participant is taking medication 10." }, "medications___11": { - "description": "" + "description": "Indicates if the participant is currently taking medication 11." }, "medications___12": { - "description": "" + "description": "Indicates if the participant is taking medication 12." }, "medications___13": { - "description": "" + "description": "Indicates if the participant is taking medication 13." }, "medications___14": { - "description": "" + "description": "Indicates if the participant is currently taking medication 14." }, "medications___15": { - "description": "" + "description": "Indicates if the participant is taking medication 15." }, "medications___16": { - "description": "" + "description": "Indicates if the participant is taking medication 16." }, "medications___17": { - "description": "" + "description": "Indicates if the participant is using medication 17." }, "medications___18": { - "description": "" + "description": "Indicates if the participant is currently taking medication 18." }, "hormone_use___1": { - "description": "" + "description": "Indicates if the participant uses hormone treatments (e.g., oral contraceptives)." }, "hormone_use___2": { - "description": "" + "description": "Indicates if the participant uses hormone replacement therapy." }, "hormone_use___3": { - "description": "" + "description": "Indicates if the participant uses hormone therapy for menopause." }, "hormone_use___4": { - "description": "" + "description": "Indicates if the participant uses other forms of hormone therapy not listed." }, "pain_medication___1": { - "description": "" + "description": "Indicates if the participant is taking pain medication 1." }, "pain_medication___2": { - "description": "" + "description": "Indicates if the participant is taking pain medication 2." }, "pain_medication___3": { - "description": "" + "description": "Indicates if the participant is taking pain medication 3." }, "menstruate": { - "description": "" + "description": "Indicates if the participant menstruates." }, "menstruate_no": { - "description": "" + "description": "Indicates if the participant does not menstruate." }, "menstrual_cycle_status": { - "description": "" + "description": "Indicates the participant's menstrual cycle status." }, "voice_activity___1": { - "description": "" + "description": "Indicates the first type of voice activity the participant engaged in." }, "voice_activity___2": { - "description": "" + "description": "Indicates the second type of voice activity engaged in by the participant." }, "voice_activity___3": { - "description": "" + "description": "Indicates the third type of voice activity the participant engaged in." }, "voice_activity___4": { - "description": "" + "description": "Indicates the fourth type of voice activity the participant engaged in." }, "voice_activity___5": { - "description": "" + "description": "Indicates the fifth type of voice activity the participant engaged in." }, "voice_activity___6": { - "description": "" + "description": "Indicates the sixth type of voice activity the participant engaged in." }, "voice_activity___7": { - "description": "" + "description": "Indicates the seventh type of voice activity the participant engaged in." }, "hours_voice_activity": { - "description": "" + "description": "Number of hours the participant engaged in voice-related activities." }, "reading_aloud": { - "description": "" + "description": "Indicates if the participant is reading aloud." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/customAffectScale.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/customAffectScale.json index 28a6c31..630aac7 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/customAffectScale.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/customAffectScale.json @@ -1,47 +1,47 @@ { "custom_affect_scale_session_id": { - "description": "" + "description": "Unique identifier for the custom affect scale session." }, "custom_affect_scale_duration": { - "description": "" + "description": "Total duration of the custom affect scale assessment." }, "sad_or_down": { - "description": "" + "description": "Indicates if the participant feels sad or down." }, "joyful": { - "description": "" + "description": "Indicates if the participant feels joyful." }, "motivated": { - "description": "" + "description": "Assesses the level of motivation or drive the participant exhibits in performing tasks." }, "lack_of_pleasure": { - "description": "" + "description": "Indicates if the participant feels a lack of pleasure or interest in doing things." }, "tired": { - "description": "" + "description": "Indicates if the participant feels tired during the assessment." }, "energetic": { - "description": "" + "description": "Indicates if the participant feels energetic or lively." }, "agitated": { - "description": "" + "description": "Indicates if the participant feels agitated." }, "irritated": { - "description": "" + "description": "Indicates if the participant feels irritated or annoyed." }, "lonely": { - "description": "" + "description": "Indicates if the participant feels lonely." }, "concentrated": { - "description": "" + "description": "Indicates if the participant is able to concentrate." }, "relaxed": { - "description": "" + "description": "Indicates if the participant feels relaxed." }, "worried": { - "description": "" + "description": "Indicates if the participant feels worried or anxious." }, "desire_to_escape": { - "description": "" + "description": "Indicates if the participant has a desire to escape stressful situations." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/demographics.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/demographics.json index 84b8681..5ff3d22 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/demographics.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/demographics.json @@ -1,167 +1,167 @@ { "demographics_session_id": { - "description": "" + "description": "Unique identifier for the demographics session." }, "demographics_duration": { - "description": "" + "description": "Total duration of the demographics section." }, "demographics_completed_by___1": { - "description": "" + "description": "Indicates if the participant completed the demographic section on their own." }, "demographics_completed_by___2": { - "description": "" + "description": "Indicates if demographics were completed by a healthcare professional." }, "demographics_completed_by___3": { - "description": "" + "description": "Indicates if demographics were completed by a caregiver." }, "state_province": { - "description": "" + "description": "The state or province where the participant lives." }, "country": { - "description": "" + "description": "The country where the participant resides." }, "gender_identity": { - "description": "" + "description": "The participant's reported gender identity." }, "specify_gender_identity": { - "description": "" + "description": "Allows the participant to specify their gender identity." }, "sexual_orientation": { - "description": "" + "description": "Indicates the participant's sexual orientation." }, "race___1": { - "description": "" + "description": "Indicates if the participant identifies with race category 1." }, "race___2": { - "description": "" + "description": "Indicates if the participant identifies with race category 2." }, "race___3": { - "description": "" + "description": "Indicates if the participant identifies with race category 3." }, "race___4": { - "description": "" + "description": "Indicates if the participant identifies with race category 4." }, "race___5": { - "description": "" + "description": "Indicates if the participant identifies with race category 5." }, "race___6": { - "description": "" + "description": "Indicates if the participant identifies with race category 6." }, "race___7": { - "description": "" + "description": "Indicates if the participant identifies with race category 7." }, "race___8": { - "description": "" + "description": "Indicates if the participant identifies with race category 8." }, "ethnicity": { - "description": "" + "description": "Indicates the participant's ethnicity." }, "other_edu_level": { - "description": "" + "description": "Indicates if the participant has received an education level not listed in other options." }, "hearing": { - "description": "" + "description": "Indicates if the participant has hearing issues." }, "vision": { - "description": "" + "description": "Indicates if the participant has vision issues." }, "cognition": { - "description": "" + "description": "Reports on the participant's cognitive abilities or issues." }, "mobility": { - "description": "" + "description": "Indicates the participant's level of mobility or movement." }, "self_care": { - "description": "" + "description": "Indicates if the participant engages in self-care activities." }, "independent_living": { - "description": "" + "description": "Indicates if the participant is living independently." }, "employ_status___1": { - "description": "" + "description": "Indicates if the participant is employed full-time." }, "employ_status___2": { - "description": "" + "description": "Indicates if the participant is employed full-time." }, "employ_status___3": { - "description": "" + "description": "Indicates if the participant is employed part-time." }, "employ_status___4": { - "description": "" + "description": "Indicates if the participant is a student." }, "employ_status___5": { - "description": "" + "description": "Indicates if the participant is a homemaker." }, "employ_status___6": { - "description": "" + "description": "Indicates if the participant is unemployed." }, "employ_status___7": { - "description": "" + "description": "Indicates if the participant is self-employed." }, "employ_status___8": { - "description": "" + "description": "Indicates if the participant is a volunteer." }, "employ_status___9": { - "description": "" + "description": "Indicates if the participant is retired." }, "household_income_usa": { - "description": "" + "description": "The participant's household income in US dollars." }, "household_income_ca": { - "description": "" + "description": "The participant's household income in Canadian dollars." }, "marital_status___1": { - "description": "" + "description": "Indicates if the participant is married." }, "marital_status___2": { - "description": "" + "description": "Indicates if the participant is in a domestic partnership." }, "marital_status___3": { - "description": "" + "description": "Indicates if the participant is separated." }, "marital_status___4": { - "description": "" + "description": "Indicates if the participant is widowed." }, "marital_status___5": { - "description": "" + "description": "Indicates if the participant is single." }, "marital_status___6": { - "description": "" + "description": "Indicates if the participant is divorced." }, "marital_status___7": { - "description": "" + "description": "Indicates if the participant is cohabiting." }, "housing_status": { - "description": "" + "description": "Indicates the participant's current housing status." }, "household_count": { - "description": "" + "description": "The number of people living in the participant's household." }, "spouse_partner_sig_other": { - "description": "" + "description": "Indicates if the participant has a spouse, partner, or significant other." }, "children": { - "description": "" + "description": "Indicates if the participant has children." }, "parent": { - "description": "" + "description": "Indicates if the participant is a parent." }, "grandparent": { - "description": "" + "description": "Indicates if the participant is a grandparent." }, "other_live_with": { - "description": "" + "description": "Indicates if the participant lives with people not listed in other options." }, "others_household_specify": { - "description": "" + "description": "Allows the participant to specify other people living in their household." }, "transportation_yn": { - "description": "" + "description": "Indicates if the participant has access to transportation." }, "primary_transportation": { - "description": "" + "description": "Indicates the participant's primary mode of transportation." }, "q_generic_demographics_complete": { - "description": "" + "description": "Indicates if the participant has completed the generic demographics section." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/depression.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/depression.json index 8e3c7c8..cd21e82 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/depression.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/depression.json @@ -1,26 +1,26 @@ { "diagnosis_depression_gsd": { - "description": "" + "description": "Indicates the participant’s diagnosis of depression." }, "diagnosis_depression_clinical_subcategory": { - "description": "" + "description": "Specifies the subcategory of clinical depression, such as major depressive disorder, for the participant." }, "diagnosis_depression_gsd_interview": { - "description": "" + "description": "Indicates if a structured clinical interview was conducted for diagnosing the participant’s depression." }, "diagnosis_depression_gsd_oqu": { - "description": "" + "description": "Indicates if an objective questionnaire was used in the diagnosis of the participant’s depression." }, "diagnosis_depression_gsd_oquw": { - "description": "" + "description": "Specifies which objective questionnaire was used in diagnosing the participant’s depression." }, "diagnosis_bipolar_subtype_active_depression": { - "description": "" + "description": "Specifies the active subtype of depression in the participant’s bipolar disorder." }, "diagnosis_bipolar_psychotic_depression": { - "description": "" + "description": "Indicates if the participant has psychotic symptoms associated with the depressive phase of their bipolar disorder." }, "diagnosis_bipolar_severity_depression": { - "description": "" + "description": "Indicates the severity of the participant’s depressive phase of bipolar disorder." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/dsm5.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/dsm5.json index e258fbc..a7fd859 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/dsm5.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/dsm5.json @@ -1,122 +1,122 @@ { "dsm_5_session_id": { - "description": "" + "description": "Unique identifier for the DSM-5 session." }, "dsm_5_duration": { - "description": "" + "description": "Total duration of the DSM-5 assessment." }, "little_interest": { - "description": "" + "description": "Indicates if the participant has little interest or pleasure in doing things." }, "feeling_down": { - "description": "" + "description": "Indicates if the participant is feeling down or sad." }, "feeling_more_irritated": { - "description": "" + "description": "Indicates if the participant feels more irritated than usual." }, "sleeping_less": { - "description": "" + "description": "Indicates if the participant is sleeping less than usual." }, "starting_more_projects": { - "description": "" + "description": "Indicates if the participant is starting more projects than they can manage." }, "feeling_nervous": { - "description": "" + "description": "Indicates if the participant feels nervous." }, "feeling_panic": { - "description": "" + "description": "Indicates if the participant feels panic or overwhelming fear." }, "avoiding_situations": { - "description": "" + "description": "Indicates if the participant is avoiding certain situations due to stress or anxiety." }, "unexplained_aches": { - "description": "" + "description": "Indicates if the participant experiences unexplained aches or pains." }, "illness_not_taken_serious": { - "description": "" + "description": "Reports if the participant feels that their illness is not taken seriously by others." }, "self_harm": { - "description": "" + "description": "Indicates if the participant has a history of self-harm." }, "hearing_things": { - "description": "" + "description": "Indicates if the participant has experienced auditory hallucinations." }, "someone_hear_thoughts": { - "description": "" + "description": "Indicates if the participant believes that others can hear their thoughts." }, "sleep_quality": { - "description": "" + "description": "Indicates the participant's subjective assessment of their sleep quality." }, "memory_issues": { - "description": "" + "description": "Reports if the participant is experiencing memory issues." }, "unpleasant_thoughts": { - "description": "" + "description": "Reports if the participant experienced unpleasant thoughts recently." }, "repeat_acts": { - "description": "" + "description": "Indicates if the participant repeats certain actions or behaviors." }, "feeling_detached": { - "description": "" + "description": "Indicates if the participant feels detached from reality or their surroundings." }, "no_purpose": { - "description": "" + "description": "Indicates if the participant feels like they have no purpose." }, "isolated": { - "description": "" + "description": "Indicates if the participant feels isolated or alone." }, "drinking_more": { - "description": "" + "description": "Indicates if the participant is consuming more alcohol." }, "smoking_more": { - "description": "" + "description": "Indicates if the participant is smoking more than usual." }, "medication_use": { - "description": "" + "description": "Indicates the participant's use of medications during the study." }, "q1_happy": { - "description": "" + "description": "Response to question 1: 'Is the participant feeling happy?'" }, "q2_self_confident": { - "description": "" + "description": "Asks how self-confident the participant feels in general." }, "q3_sleep": { - "description": "" + "description": "Response to question 3: 'Is the participant experiencing trouble sleeping?'" }, "q4_talk": { - "description": "" + "description": "Response to question 4: 'Does the participant talk about a specific topic?'" }, "q5_active": { - "description": "" + "description": "Inquires how active or energetic the participant feels throughout the day." }, "social_phobia_1": { - "description": "" + "description": "Response to social phobia item 1, indicating the participant's level of discomfort in social situations." }, "social_phobia_2": { - "description": "" + "description": "Response to social phobia item 2, assessing the participant's level of discomfort in social situations." }, "social_phobia_3": { - "description": "" + "description": "Indicates if the participant experiences social phobia related to situation 3." }, "social_phobia_4": { - "description": "" + "description": "Indicates if the participant experiences social phobia in scenario 4." }, "social_phobia_5": { - "description": "" + "description": "Indicates if the participant experiences social phobia in scenario 5." }, "social_phobia_6": { - "description": "" + "description": "Indicates if the participant experiences social phobia in scenario 6." }, "social_phobia_7": { - "description": "" + "description": "Indicates the participant's level of social phobia based on scenario 7." }, "social_phobia_8": { - "description": "" + "description": "Indicates if the participant experiences social phobia in scenario 8." }, "social_phobia_9": { - "description": "" + "description": "Indicates if the participant experiences social phobia in scenario 9." }, "social_phobia_10": { - "description": "" + "description": "Indicates if the participant has social phobia in a specific scenario (item 10)." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/dyspnea.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/dyspnea.json index f2581fb..a0a3a4c 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/dyspnea.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/dyspnea.json @@ -1,38 +1,38 @@ { "dyspnea_index_session_id": { - "description": "" + "description": "Unique identifier for the Dyspnea Index session." }, "dyspnea_index_duration": { - "description": "" + "description": "Duration of the Dyspnea Index assessment." }, "di_air_in": { - "description": "" + "description": "Reports if the participant experiences difficulty inhaling air." }, "di_tightness_throat": { - "description": "" + "description": "Indicates if the participant experiences tightness in the throat as part of their dyspnea symptoms." }, "di_effort_breathe": { - "description": "" + "description": "Indicates if the participant experiences increased effort while breathing." }, "di_weather_changes": { - "description": "" + "description": "Indicates if the participant's breathing issues worsen with changes in the weather." }, "di_breathing_worse_stress": { - "description": "" + "description": "Indicates if the participant’s breathing gets worse when stressed." }, "di_sound_breathing_in": { - "description": "" + "description": "Indicates if the participant experiences sound while breathing in as part of their dyspnea symptoms." }, "di_strain": { - "description": "" + "description": "Indicates if the participant experiences strain when breathing." }, "di_exercise": { - "description": "" + "description": "Reports if the participant has difficulty exercising." }, "di_breathing_stresses_me": { - "description": "" + "description": "Indicates if the participant's breathing issues cause them stress." }, "di_restrict_personal_social_life": { - "description": "" + "description": "Indicates if the participant's breathing issues restrict their personal and social life." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/eligibility.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/eligibility.json index 406e44d..133b9b5 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/eligibility.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/eligibility.json @@ -1,104 +1,104 @@ { "eligible_studies___1": { - "description": "" + "description": "Indicates if the participant is eligible for study 1." }, "eligible_studies___2": { - "description": "" + "description": "Indicates if the participant is eligible for studies related to neurological and neurodegenerative disorders." }, "eligible_studies___3": { - "description": "" + "description": "Indicates if the participant is eligible for mood and psychiatric disorder studies." }, "eligible_studies___4": { - "description": "" + "description": "Indicates if the participant is eligible for respiratory disorder studies." }, "eligible_studies___5": { - "description": "" + "description": "Indicates if the participant is eligible for pediatric disorder studies." }, "is_control_participant": { - "description": "" + "description": "Indicates whether the participant is a control group participant." }, "laryng_cancer": { - "description": "" + "description": "Indicates if the participant has laryngeal cancer." }, "benign_cord_lesion": { - "description": "" + "description": "Indicates if the participant has benign lesions of the vocal cord such as nodules, polyps, or cysts." }, "rrp": { - "description": "" + "description": "Indicates if the participant has recurrent laryngeal papilloma (RRP)." }, "spas_dys": { - "description": "" + "description": "Indicates if the participant has spasmodic dysphonia or laryngeal tremor." }, "voc_fold_paralysis": { - "description": "" + "description": "Indicates if the participant has unilateral vocal fold paralysis." }, "alz_dementia_mci": { - "description": "" + "description": "Indicates if the participant has Alzheimer’s, dementia, or mild cognitive impairment." }, "als": { - "description": "" + "description": "Indicates if the participant has Amyotrophic Lateral Sclerosis (ALS)." }, "parkinsons": { - "description": "" + "description": "Indicates if the participant has Parkinson’s disease." }, "alcohol_subst_abuse": { - "description": "" + "description": "Indicates if the participant has alcohol or substance use disorder." }, "gad": { - "description": "" + "description": "Indicates if the participant has an anxiety disorder." }, "add_adhd": { - "description": "" + "description": "Indicates if the participant has Attention-Deficit/Hyperactivity Disorder (ADHD)." }, "asd": { - "description": "" + "description": "Indicates if the participant has Autism Spectrum Disorder (ASD)." }, "bipolar": { - "description": "" + "description": "Indicates if the participant has Bipolar Disorder." }, "bpd": { - "description": "" + "description": "Indicates if the participant has Borderline Personality Disorder (BPD)." }, "depression": { - "description": "" + "description": "Indicates if the participant has depression or major depressive disorder." }, "ed": { - "description": "" + "description": "Indicates if the participant has an eating disorder (ED)." }, "insomnia": { - "description": "" + "description": "Indicates if the participant has insomnia or other sleep disorders." }, "ocd": { - "description": "" + "description": "Indicates if the participant has Obsessive-Compulsive Disorder (OCD)." }, "panic": { - "description": "" + "description": "Indicates if the participant has panic disorder." }, "ptsd": { - "description": "" + "description": "Indicates if the participant has Post-Traumatic Stress Disorder (PTSD)." }, "schizophrenia": { - "description": "" + "description": "Indicates if the participant has schizophrenia." }, "soc_anx_dis": { - "description": "" + "description": "Indicates if the participant has social anxiety disorder." }, "other_psych": { - "description": "" + "description": "Indicates if the participant has other psychiatric disorders." }, "asthma": { - "description": "" + "description": "Indicates if the participant has asthma." }, "airway_stenosis": { - "description": "" + "description": "Indicates if the participant has airway stenosis, such as bilateral vocal fold paralysis or laryngeal stenosis." }, "chronic_cough": { - "description": "" + "description": "Indicates if the participant has chronic cough." }, "copd": { - "description": "" + "description": "Indicates if the participant has Chronic Obstructive Pulmonary Disease (COPD)." }, "osa": { - "description": "" + "description": "Indicates if the participant has obstructive sleep apnea (OSA)." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/enrollment.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/enrollment.json index 6157ecf..5cecd54 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/enrollment.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/enrollment.json @@ -1,89 +1,89 @@ { "ef_select_language": { - "description": "" + "description": "Indicates the participant’s selected language for the study." }, "ef_any_vision_related_req": { - "description": "" + "description": "Indicates if the participant has any vision-related requirements to assist with reading text in the study." }, "ef_vision_a11y_options___1": { - "description": "" + "description": "Indicates if the participant requires changes to the font size as part of the study’s accessibility features." }, "ef_vision_a11y_options___2": { - "description": "" + "description": "Indicates if the participant requires changes to the font color (high contrast mode) as part of the study’s accessibility features." }, "ef_vision_a11y_options___3": { - "description": "" + "description": "Indicates if the participant requires the use of a screen reader as part of the study’s accessibility features." }, "ef_vision_a11y_options___4": { - "description": "" + "description": "Indicates if the participant requires a person to read the text to them as part of the study’s accessibility features." }, "ef_any_hearing_related_req": { - "description": "" + "description": "Indicates if the participant has any hearing-related requirements to assist with listening to sound files in the study." }, "ef_hearing_a11y_options___1": { - "description": "" + "description": "Indicates if the participant requires an increase in volume as part of the study’s accessibility features." }, "ef_hearing_a11y_options___2": { - "description": "" + "description": "Indicates if the participant requires closed captions as part of the study’s accessibility features." }, "ef_hearing_a11y_options___3": { - "description": "" + "description": "Indicates if the participant prefers to use haptic feedback (vibrations) instead of audio cues as part of the study’s accessibility features." }, "ef_any_physical_challenges": { - "description": "" + "description": "Indicates if the participant has any physical challenges that may affect their ability to navigate the application using a touch screen." }, "ef_physical_a11y_options___1": { - "description": "" + "description": "Indicates if the participant requires an increase in button size as part of the study’s accessibility features." }, "ef_physical_a11y_options___2": { - "description": "" + "description": "Indicates if the participant requires the use of an alternative keyboard connected to the app." }, "ef_physical_a11y_options___3": { - "description": "" + "description": "Indicates if the participant would prefer to navigate the survey using voice commands instead of the touch screen." }, "ef_any_cognitive_challeges": { - "description": "" + "description": "Indicates if the participant has any cognitive challenges, including difficulty reading, that may require assistance in answering questions and following directions in the study." }, "ef_cognitive_a11y_options___1": { - "description": "" + "description": "Indicates if the participant prefers to have the questions read aloud using text-to-speech as part of the study’s accessibility features." }, "ef_cognitive_a11y_options___2": { - "description": "" + "description": "Indicates if the participant prefers to have a person read the text to them as part of the study’s accessibility features." }, "ef_cognitive_a11y_options___3": { - "description": "" + "description": "Indicates if the participant prefers to speak their answers instead of typing them as part of the study’s accessibility features." }, "ef_completed_by___1": { - "description": "" + "description": "Indicates if the responses in the survey were completed by the participant themselves." }, "ef_completed_by___2": { - "description": "" + "description": "Indicates if the responses in the survey were completed by an assistant." }, "ef_completed_by___3": { - "description": "" + "description": "Indicates if the responses in the survey were completed by a parent or caregiver." }, "ef_primary_language": { - "description": "" + "description": "Indicates the primary language spoken by the participant." }, "ef_primary_language_other": { - "description": "" + "description": "If the participant's primary language is not listed, this field specifies the language." }, "ef_fluent_languages___1": { - "description": "" + "description": "Indicates if the participant speaks no additional languages fluently." }, "ef_fluent_languages___2": { - "description": "" + "description": "Indicates if the participant speaks English fluently in addition to their primary language." }, "ef_fluent_languages___3": { - "description": "" + "description": "Indicates if the participant speaks French fluently in addition to their primary language." }, "ef_fluent_languages___4": { - "description": "" + "description": "Indicates if the participant speaks Spanish fluently in addition to their primary language." }, "ef_fluent_languages___5": { - "description": "" + "description": "Indicates if the participant speaks any other language fluently, and provides the details." }, "ef_fluent_language_other": { - "description": "" + "description": "If the participant speaks another language fluently that is not listed, this field specifies the language." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/gad7.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/gad7.json index f584727..d5228d9 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/gad7.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/gad7.json @@ -1,29 +1,29 @@ { "gad_7_session_id": { - "description": "" + "description": "Unique identifier for the GAD-7 session." }, "nervous_anxious": { - "description": "" + "description": "Indicates if the participant feels nervous or anxious." }, "cant_control_worry": { - "description": "" + "description": "Indicates if the participant feels that they cannot control their worry." }, "worry_too_much": { - "description": "" + "description": "Indicates if the participant feels that they worry too much." }, "trouble_relaxing": { - "description": "" + "description": "Indicates if the participant has trouble relaxing." }, "hard_to_sit_still": { - "description": "" + "description": "Indicates if the participant finds it hard to sit still." }, "easily_agitated": { - "description": "" + "description": "Indicates if the participant feels easily agitated." }, "afraid_of_things": { - "description": "" + "description": "Indicates if the participant is afraid of specific things or situations." }, "tough_to_work": { - "description": "" + "description": "Indicates if the participant finds it difficult to concentrate or work." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/laryngealCancer.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/laryngealCancer.json index 87d874e..96dce31 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/laryngealCancer.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/laryngealCancer.json @@ -1,134 +1,134 @@ { "diagnois_lc_gsd_sll": { - "description": "" + "description": "Indicates if the participant has a suspicious laryngeal lesion confirmed by laryngoscopy or stroboscopy." }, "diagnosis_lc_gsd_bpr": { - "description": "" + "description": "Indicates if the participant has laryngeal cancer confirmed by biopsy or pathology report." }, "diagnosis_lc_gsd_uots___ct_neck": { - "description": "" + "description": "Indicates if the participant has undergone a CT of the neck as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_gsd_uots___ct_chest": { - "description": "" + "description": "Indicates if the participant has undergone a CT of the chest as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_gsd_uots___mri_neck": { - "description": "" + "description": "Indicates if the participant has undergone an MRI of the neck as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_gsd_uots___pet_ct": { - "description": "" + "description": "Indicates if the participant has undergone a PET-CT as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_gsd_uots___ultrasound_neck": { - "description": "" + "description": "Indicates if the participant has undergone an ultrasound of the neck as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_ds___right_vocal_fold": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the right vocal fold." }, "diagnosis_lc_ds___left_vocal_fold": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the left vocal fold." }, "diagnosis_lc_ds___both_vocal_folds": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves both vocal folds." }, "diagnosis_lc_ds___anterior_commissure": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the anterior commissure." }, "diagnosis_lc_ds___ventricular_folds": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the ventricular folds." }, "diagnosis_lc_ds___subglottal_areas": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the subglottal areas." }, "diagnosis_lc_etiology___smoking": { - "description": "" + "description": "Indicates if smoking is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_etiology___alcohol": { - "description": "" + "description": "Indicates if alcohol use is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_etiology___family_history": { - "description": "" + "description": "Indicates if family history is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_etiology___hpv": { - "description": "" + "description": "Indicates if human papilloma virus (HPV) is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_etiology___exposure_other_harmful_substances": { - "description": "" + "description": "Indicates if exposure to other harmful substances is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_ds_t_stage": { - "description": "" + "description": "Indicates the T stage of the participant’s laryngeal cancer according to the AJCC Classification." }, "diagnosis_lc_ds_n_stage": { - "description": "" + "description": "Indicates the N stage of the participant’s laryngeal cancer according to the AJCC Classification." }, "diagnosis_lc_ds_m_stage": { - "description": "" + "description": "Indicates the M stage of the participant’s laryngeal cancer according to the AJCC Classification." }, "diagnosis_lc_degree_os_1": { - "description": "" + "description": "Indicates the overall severity of the participant’s laryngeal cancer." }, "diagnosis_lc_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the overall severity of the participant’s laryngeal cancer." }, "diagnosis_lc_degree_r_1": { - "description": "" + "description": "Indicates the roughness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_b_1": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_s_1": { - "description": "" + "description": "Indicates the strain in the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_p_1": { - "description": "" + "description": "Indicates the pitch of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_l_1": { - "description": "" + "description": "Indicates the loudness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_comments": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice due to laryngeal cancer." }, "diagnosis_as_ds_ccsr": { - "description": "" + "description": "Indicates if the participant’s cancer is causing stridor at rest." }, "diagnosis_lc_treatment": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___radiation": { - "description": "" + "description": "Indicates if the participant has undergone radiation as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___chemotherapy": { - "description": "" + "description": "Indicates if the participant has undergone chemotherapy as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___immunotherapy": { - "description": "" + "description": "Indicates if the participant has undergone immunotherapy as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___surgery": { - "description": "" + "description": "Indicates if the participant has undergone surgery as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___voice_or_speech_therapy": { - "description": "" + "description": "Indicates if the participant has undergone voice or speech therapy as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___other": { - "description": "" + "description": "Indicates if the participant has undergone other treatments for laryngeal cancer." }, "diagnosis_lc_treatment_s___endoscopic_laser": { - "description": "" + "description": "Indicates if the participant has undergone endoscopic laser surgery as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_s___partial_laryngectomy": { - "description": "" + "description": "Indicates if the participant has undergone partial laryngectomy as treatment for laryngeal cancer." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/laryngealDystonia.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/laryngealDystonia.json index f2da5e3..13ea968 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/laryngealDystonia.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/laryngealDystonia.json @@ -1,119 +1,119 @@ { "diagnosis_ld_qete___laryngologist": { - "description": "" + "description": "Indicates if the participant's laryngeal dystonia was determined by a laryngologist as part of the qualitative expert team evaluation." }, "diagnosis_ld_qete___speech_language_pathology": { - "description": "" + "description": "Indicates if the participant's laryngeal dystonia was determined by a speech-language pathologist as part of the qualitative expert team evaluation." }, "diagnosis_ld_qete___neurologist_specializing_disorders": { - "description": "" + "description": "Indicates if the participant's laryngeal dystonia was determined by a neurologist specializing in movement disorders as part of the qualitative expert team evaluation." }, "diagnosis_ld_assessment___aural_perceptual_evaluation": { - "description": "" + "description": "Indicates if the participant underwent an aural-perceptual evaluation as part of their laryngeal dystonia assessment." }, "diagnosis_ld_assessment___laryngoscopy_or_stroboscopy": { - "description": "" + "description": "Indicates if the participant underwent laryngoscopy or stroboscopy as part of their laryngeal dystonia assessment." }, "diagnosis_ld_assessment___neurological_evaluation": { - "description": "" + "description": "Indicates if the participant underwent a neurological evaluation as part of their laryngeal dystonia assessment." }, "diagnosis_ld_ds___adld": { - "description": "" + "description": "Indicates if the participant has adductor laryngeal dystonia (ADLD)." }, "diagnosis_ld_ds___abld": { - "description": "" + "description": "Indicates if the participant has abductor laryngeal dystonia (ABLD)." }, "diagnosis_ld_ds___vocal_tremor": { - "description": "" + "description": "Indicates if the participant has vocal tremor." }, "diagnosis_ld_ds___mixed_laryngeal_dystonia": { - "description": "" + "description": "Indicates if the participant has mixed laryngeal dystonia." }, "diagnosis_ld_ds___sld": { - "description": "" + "description": "Indicates if the participant has singer's laryngeal dystonia (SLD)." }, "diagnosis_ld_ds___arld": { - "description": "" + "description": "Indicates if the participant has adductor laryngeal spasms during inspiration (ARLD)." }, "diagnosis_ld_etiology": { - "description": "" + "description": "Specifies the etiology or cause of the participant’s laryngeal dystonia." }, "diagnosis_ld_etiology_cc___essential_tremor_of_the_hands": { - "description": "" + "description": "Indicates if the participant has an essential tremor of the hands." }, "diagnosis_ld_etiology_cc___essential_tremor_of_the_head": { - "description": "" + "description": "Indicates if the participant has an essential tremor of the head." }, "diagnosis_ld_etiology_cc___jaw_tremor": { - "description": "" + "description": "Indicates if the participant has a jaw tremor." }, "diagnosis_ld_etiology_cc___dystonia_of_the_head_and_neck": { - "description": "" + "description": "Indicates if the participant has dystonia of the head and neck." }, "diagnosis_ld_etiology_cc___other_type_of_dystonia": { - "description": "" + "description": "Indicates if the participant has another type of dystonia." }, "diagnosis_ld_degree_os_1": { - "description": "" + "description": "Indicates the participant's overall severity of laryngeal dystonia." }, "diagnosis_ld_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the participant's overall severity of laryngeal dystonia." }, "diagnosis_ld_degree_r_1": { - "description": "" + "description": "Indicates the roughness of the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_b_1": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_s_1": { - "description": "" + "description": "Indicates the strain in the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_p_1": { - "description": "" + "description": "Indicates the pitch of the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_l_1": { - "description": "" + "description": "Indicates the loudness of the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_comments": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_treatment": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___botox_injections": { - "description": "" + "description": "Indicates if the participant has received botox injections as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___voice_or_speech_therapy": { - "description": "" + "description": "Indicates if the participant has undergone voice or speech therapy as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___vibrotactile_stimulation": { - "description": "" + "description": "Indicates if the participant has undergone vibrotactile stimulation as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___deep_brain_stimulation": { - "description": "" + "description": "Indicates if the participant has undergone deep brain stimulation as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___mrgfus": { - "description": "" + "description": "Indicates if the participant has undergone magnetic resonance-guided focused ultrasound (MRgFUS) as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___other": { - "description": "" + "description": "Indicates if the participant has undergone other treatments for laryngeal dystonia." }, "diagnosis_ld_treatment_bi_li": { - "description": "" + "description": "Specifies when the participant received their last injection as treatment for laryngeal dystonia." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/leicester.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/leicester.json index 9611d4c..ed536fc 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/leicester.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/leicester.json @@ -1,65 +1,65 @@ { "leicester_cough_session_id": { - "description": "" + "description": "Unique identifier for the Leicester Cough Questionnaire session." }, "leicester_cough_duration": { - "description": "" + "description": "Total duration of the Leicester Cough Questionnaire (LCQ)." }, "lcq_chest_stomach_pains": { - "description": "" + "description": "Indicates if the participant experiences chest or stomach pains as part of their cough symptoms." }, "lcq_sputum_phlegm": { - "description": "" + "description": "Indicates if the participant produces sputum or phlegm as part of their cough symptoms." }, "lcq_tired": { - "description": "" + "description": "Indicates if the participant feels tired due to their cough." }, "lcq_embarrassed": { - "description": "" + "description": "Indicates if the participant feels embarrassed by their cough." }, "lcq_anxious": { - "description": "" + "description": "Indicates if the participant feels anxious due to their cough." }, "lcq_interfere_job": { - "description": "" + "description": "Indicates if the participant's cough interferes with their ability to work." }, "lcq_interfere_life": { - "description": "" + "description": "Indicates if the participant's cough interferes with their daily life." }, "lcq_exposure_paint": { - "description": "" + "description": "Indicates if the participant has been exposed to paint or chemical fumes that worsen their cough." }, "lcq_sleep": { - "description": "" + "description": "Indicates if the participant's cough affects their sleep." }, "lcq_bout": { - "description": "" + "description": "Indicates if the participant has bouts of coughing." }, "lcq_frustrated": { - "description": "" + "description": "Indicates if the participant feels frustrated as part of their cough symptoms." }, "lcq_fed_up": { - "description": "" + "description": "Indicates if the participant feels fed up due to their cough." }, "lcq_hoarse_voice": { - "description": "" + "description": "Indicates if the participant has a hoarse voice as part of their cough symptoms." }, "lcq_serious_illness": { - "description": "" + "description": "Indicates if the participant's cough interferes with their life due to a serious illness." }, "lcq_other_people": { - "description": "" + "description": "Indicates if the participant feels that their cough bothers other people." }, "lcq_interrupt_conversation": { - "description": "" + "description": "Indicates if the participant's cough interrupts conversations." }, "lcq_partner": { - "description": "" + "description": "Indicates if the participant feels that their cough affects their partner or significant other." }, "lcq_felt_in_control": { - "description": "" + "description": "Indicates if the participant feels in control of their cough." }, "lcq_energy": { - "description": "" + "description": "Indicates if the participant experiences low energy as part of their cough symptoms." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/panas.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/panas.json index ead02db..4f582d8 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/panas.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/panas.json @@ -1,38 +1,38 @@ { "panas_session_id": { - "description": "" + "description": "Unique session identifier for the PANAS (Positive and Negative Affect Schedule) questionnaire." }, "panas_duration": { - "description": "" + "description": "Duration of the Positive and Negative Affect Schedule (PANAS) questionnaire." }, "upset": { - "description": "" + "description": "Indicates if the participant feels upset." }, "hostile": { - "description": "" + "description": "Indicates if the participant feels hostile or angry." }, "alert": { - "description": "" + "description": "Indicates if the participant is alert during the session." }, "ashamed": { - "description": "" + "description": "Indicates if the participant feels ashamed." }, "inspired": { - "description": "" + "description": "Indicates if the participant feels inspired or motivated." }, "nervous": { - "description": "" + "description": "Indicates if the participant feels nervous." }, "determined": { - "description": "" + "description": "Indicates if the participant feels determined or focused." }, "attentive": { - "description": "" + "description": "Indicates if the participant appears attentive during the session." }, "afraid": { - "description": "" + "description": "Indicates if the participant feels afraid." }, "active": { - "description": "" + "description": "Indicates if the participant feels physically active or engaged." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/parkinsons.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/parkinsons.json index d79808c..b329c8b 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/parkinsons.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/parkinsons.json @@ -1,137 +1,137 @@ { "diagnosis_parkinsons_gsd_category_1___bradykinesia": { - "description": "" + "description": "Indicates if the participant has bradykinesia as part of their Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_1___tremor": { - "description": "" + "description": "Indicates if the participant has tremor as part of their Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_1___rigidity": { - "description": "" + "description": "Indicates if the participant has rigidity as part of their Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_1_calculation": { - "description": "" + "description": "Indicates if the participant meets the criteria for Category 1 Parkinsonism based on bradykinesia, tremor, or rigidity." }, "diagnosis_parkinsons_gsd_category_2___cerebellar_abnormalities": { - "description": "" + "description": "Indicates if the participant has cerebellar abnormalities as part of the exclusion criteria for Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_2___supranuclear_gaze_palsy": { - "description": "" + "description": "Indicates if the participant has supranuclear gaze palsy as part of the exclusion criteria for Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_2___bvf_ftd_ppa": { - "description": "" + "description": "Indicates if the participant has a diagnosis of behavioral variant frontotemporal dementia (bvFTD) or primary progressive aphasia (PPA) within five years of disease onset as part of the exclusion criteria for Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_2___lower_limbs": { - "description": "" + "description": "Indicates if the participant’s Parkinsonian features are restricted to the lower limbs for more than three years as part of the exclusion criteria." }, "diagnosis_parkinsons_gsd_category_2___dopamine_treatment": { - "description": "" + "description": "Indicates if the participant has been treated with dopamine or related medications." }, "diagnosis_parkinsons_gsd_category_2___absence_of_response": { - "description": "" + "description": "Indicates if the participant shows no response in category 2 of the Parkinson's GSD assessment." }, "diagnosis_parkinsons_gsd_category_2___cortical_sensory_loss": { - "description": "" + "description": "Indicates if the participant has cortical sensory loss as part of Parkinson's GSD Category 2." }, "diagnosis_parkinsons_gsd_category_2___dat_scan": { - "description": "" + "description": "Indicates if the participant has undergone a DAT scan as part of Parkinson's GSD Category 2." }, "diagnosis_parkinsons_gsd_category_2___alternative_condition": { - "description": "" + "description": "Indicates if the participant has an alternative condition related to Parkinson's disease GSD Category 2." }, "diagnosis_parkinsons_gsd_category_2_calculation": { - "description": "" + "description": "Calculation for Parkinson's GSD Category 2 diagnosis." }, "diagnosis_parkinsons_gsd_category_3___response_dopaminergic_therapy": { - "description": "" + "description": "Indicates if the participant's Parkinson's diagnosis includes response to dopaminergic therapy under GSD category 3." }, "diagnosis_parkinsons_gsd_category_3___levodopa_induced_dyskinesia": { - "description": "" + "description": "Indicates if the participant has levodopa-induced dyskinesia as part of their Parkinson's diagnosis." }, "diagnosis_parkinsons_gsd_category_3___rest_tremor": { - "description": "" + "description": "Indicates if the participant's Parkinson's diagnosis includes rest tremor under GSD category 3." }, "diagnosis_parkinsons_gsd_category_3___mibg": { - "description": "" + "description": "Indicates if the participant's Parkinson's diagnosis includes MIBG in category 3 of the GSD assessment." }, "diagnosis_parkinsons_gsd_category_3_calculation": { - "description": "" + "description": "Calculation for Parkinson's GSD Category 3 diagnosis." }, "diagnosis_parkinsons_gsd_calculation": { - "description": "" + "description": "Calculated score for Parkinson's disease diagnosis based on the GSD (Global Severity of Disease) scale." }, "diagnosis_parkinsons_disease_subtype": { - "description": "" + "description": "Indicates the subtype of Parkinson's disease diagnosed in the participant." }, "diagnosis_parkinsons_etiology": { - "description": "" + "description": "Indicates the etiology or cause of the participant's Parkinson's diagnosis." }, "diagnosis_parkinsons_ds": { - "description": "" + "description": "Indicates the diagnostic subcategory of the participant's Parkinson's disease." }, "diagnosis_parkinsons_ma___updrs": { - "description": "" + "description": "Indicates the participant's motor assessment score on the UPDRS (Unified Parkinson's Disease Rating Scale)." }, "diagnosis_parkinsons_ma___other": { - "description": "" + "description": "Indicates if the participant has other motor assessment results for Parkinson's disease." }, "diagnosis_parkinsons_ma_uprds": { - "description": "" + "description": "Indicates the participant's score on the Unified Parkinson's Disease Rating Scale (UPDRS)." }, "diagnosis_parkinsons_ma_updrs_part_i_score": { - "description": "" + "description": "Score from Part I of the MDS-UPDRS, assessing non-motor aspects of daily living." }, "diagnosis_parkinsons_ma_updrs_part_ii_score": { - "description": "" + "description": "Score from Part II of the MDS-UPDRS, assessing the participant's activities of daily living." }, "diagnosis_parkinsons_ma_updrs_part_iii_score": { - "description": "" + "description": "Score from Part III of the MDS-UPDRS, assessing motor symptoms in Parkinson's disease." }, "diagnosis_parkinsons_ma_updrs_part_iv_score": { - "description": "" + "description": "Score from Part IV of the MDS-UPDRS, assessing complications of therapy in Parkinson's disease." }, "diagnosis_parkinsons_non_motor_symptoms": { - "description": "" + "description": "Indicates if the participant has non-motor symptoms associated with Parkinson's disease." }, "diagnosis_parkinsons_non_motor_symptoms_yes": { - "description": "" + "description": "Indicates specific non-motor symptoms that the participant experiences as part of Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained": { - "description": "" + "description": "Indicates if the participant has received treatment for Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained_yes___medications": { - "description": "" + "description": "Indicates if the participant is receiving medication for Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained_yes___npi": { - "description": "" + "description": "Indicates if the participant has received non-pharmacological interventions as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___levodopa": { - "description": "" + "description": "Indicates if the participant is receiving levodopa as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___dopamine_agonists": { - "description": "" + "description": "Indicates if the participant is receiving dopamine agonists as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___mao_b": { - "description": "" + "description": "Indicates if the participant is receiving MAO-B inhibitors as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___amantadine": { - "description": "" + "description": "Indicates if the participant is receiving Amantadine for Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___other": { - "description": "" + "description": "Indicates if the participant is receiving other medications for Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___physical_therapy": { - "description": "" + "description": "Indicates if the participant has received physical therapy as a treatment for Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___occupational_therapy": { - "description": "" + "description": "Indicates if the participant is receiving occupational therapy as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___speech_therapy": { - "description": "" + "description": "Indicates if the participant has received speech therapy as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___dbs": { - "description": "" + "description": "Indicates if the participant has received deep brain stimulation (DBS) as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___other": { - "description": "" + "description": "Indicates if the participant has received non-pharmacological treatment for Parkinson's, other than those specified." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/participant.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/participant.json index f85de86..45be957 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/participant.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/participant.json @@ -1,1172 +1,1157 @@ { "record_id": { - "description": "" + "description": "Unique identifier for each participant." }, "selected_language": { - "description": "" + "description": "The language chosen by the participant for communication during the study." }, "enrollment_institution": { - "description": "" + "description": "The institution where the participant has enrolled in the study." }, "age": { - "description": "" + "description": "The age of the participant, measured in years." }, "eligible_studies___1": { - "description": "" + "description": "Indicates if the participant is eligible for study 1." }, "eligible_studies___2": { - "description": "" + "description": "Indicates if the participant is eligible for studies related to neurological and neurodegenerative disorders." }, "eligible_studies___3": { - "description": "" + "description": "Indicates if the participant is eligible for mood and psychiatric disorder studies." }, "eligible_studies___4": { - "description": "" + "description": "Indicates if the participant is eligible for respiratory disorder studies." }, "eligible_studies___5": { - "description": "" + "description": "Indicates if the participant is eligible for pediatric disorder studies." }, "is_control_participant": { - "description": "" + "description": "Indicates whether the participant is a control group participant." }, "laryng_cancer": { - "description": "" + "description": "Indicates if the participant has laryngeal cancer." }, "benign_cord_lesion": { - "description": "" + "description": "Indicates if the participant has benign lesions of the vocal cord such as nodules, polyps, or cysts." }, "rrp": { - "description": "" + "description": "Indicates if the participant has recurrent laryngeal papilloma (RRP)." }, "spas_dys": { - "description": "" + "description": "Indicates if the participant has spasmodic dysphonia or laryngeal tremor." }, "voc_fold_paralysis": { - "description": "" + "description": "Indicates if the participant has unilateral vocal fold paralysis." }, "alz_dementia_mci": { - "description": "" + "description": "Indicates if the participant has Alzheimer’s, dementia, or mild cognitive impairment." }, "als": { - "description": "" + "description": "Indicates if the participant has Amyotrophic Lateral Sclerosis (ALS)." }, "parkinsons": { - "description": "" + "description": "Indicates if the participant has Parkinson’s disease." }, "alcohol_subst_abuse": { - "description": "" + "description": "Indicates if the participant has alcohol or substance use disorder." }, "gad": { - "description": "" + "description": "Indicates if the participant has an anxiety disorder." }, "add_adhd": { - "description": "" + "description": "Indicates if the participant has Attention-Deficit/Hyperactivity Disorder (ADHD)." }, "asd": { - "description": "" + "description": "Indicates if the participant has Autism Spectrum Disorder (ASD)." }, "bipolar": { - "description": "" + "description": "Indicates if the participant has Bipolar Disorder." }, "bpd": { - "description": "" + "description": "Indicates if the participant has Borderline Personality Disorder (BPD)." }, "depression": { - "description": "" + "description": "Indicates if the participant has depression or major depressive disorder." }, "ed": { - "description": "" + "description": "Indicates if the participant has an eating disorder (ED)." }, "insomnia": { - "description": "" + "description": "Indicates if the participant has insomnia or other sleep disorders." }, "ocd": { - "description": "" + "description": "Indicates if the participant has Obsessive-Compulsive Disorder (OCD)." }, "panic": { - "description": "" + "description": "Indicates if the participant has panic disorder." }, "ptsd": { - "description": "" + "description": "Indicates if the participant has Post-Traumatic Stress Disorder (PTSD)." }, "schizophrenia": { - "description": "" + "description": "Indicates if the participant has schizophrenia." }, "soc_anx_dis": { - "description": "" + "description": "Indicates if the participant has social anxiety disorder." }, "other_psych": { - "description": "" + "description": "Indicates if the participant has other psychiatric disorders." }, "asthma": { - "description": "" + "description": "Indicates if the participant has asthma." }, "airway_stenosis": { - "description": "" + "description": "Indicates if the participant has airway stenosis, such as bilateral vocal fold paralysis or laryngeal stenosis." }, "chronic_cough": { - "description": "" + "description": "Indicates if the participant has chronic cough." }, "copd": { - "description": "" + "description": "Indicates if the participant has Chronic Obstructive Pulmonary Disease (COPD)." }, "osa": { - "description": "" + "description": "Indicates if the participant has obstructive sleep apnea (OSA)." }, "subjectparticipant_eligible_studies_complete": { - "description": "" + "description": "Indicates if the eligibility screening for participant studies is complete." }, "ef_select_language": { - "description": "" + "description": "Indicates the participant’s selected language for the study." }, "ef_any_vision_related_req": { - "description": "" + "description": "Indicates if the participant has any vision-related requirements to assist with reading text in the study." }, "ef_vision_a11y_options___1": { - "description": "" + "description": "Indicates if the participant requires changes to the font size as part of the study’s accessibility features." }, "ef_vision_a11y_options___2": { - "description": "" + "description": "Indicates if the participant requires changes to the font color (high contrast mode) as part of the study’s accessibility features." }, "ef_vision_a11y_options___3": { - "description": "" + "description": "Indicates if the participant requires the use of a screen reader as part of the study’s accessibility features." }, "ef_vision_a11y_options___4": { - "description": "" + "description": "Indicates if the participant requires a person to read the text to them as part of the study’s accessibility features." }, "ef_any_hearing_related_req": { - "description": "" + "description": "Indicates if the participant has any hearing-related requirements to assist with listening to sound files in the study." }, "ef_hearing_a11y_options___1": { - "description": "" + "description": "Indicates if the participant requires an increase in volume as part of the study’s accessibility features." }, "ef_hearing_a11y_options___2": { - "description": "" + "description": "Indicates if the participant requires closed captions as part of the study’s accessibility features." }, "ef_hearing_a11y_options___3": { - "description": "" + "description": "Indicates if the participant prefers to use haptic feedback (vibrations) instead of audio cues as part of the study’s accessibility features." }, "ef_any_physical_challenges": { - "description": "" + "description": "Indicates if the participant has any physical challenges that may affect their ability to navigate the application using a touch screen." }, "ef_physical_a11y_options___1": { - "description": "" + "description": "Indicates if the participant requires an increase in button size as part of the study’s accessibility features." }, "ef_physical_a11y_options___2": { - "description": "" + "description": "Indicates if the participant requires the use of an alternative keyboard connected to the app." }, "ef_physical_a11y_options___3": { - "description": "" + "description": "Indicates if the participant would prefer to navigate the survey using voice commands instead of the touch screen." }, "ef_any_cognitive_challeges": { - "description": "" + "description": "Indicates if the participant has any cognitive challenges, including difficulty reading, that may require assistance in answering questions and following directions in the study." }, "ef_cognitive_a11y_options___1": { - "description": "" + "description": "Indicates if the participant prefers to have the questions read aloud using text-to-speech as part of the study’s accessibility features." }, "ef_cognitive_a11y_options___2": { - "description": "" + "description": "Indicates if the participant prefers to have a person read the text to them as part of the study’s accessibility features." }, "ef_cognitive_a11y_options___3": { - "description": "" + "description": "Indicates if the participant prefers to speak their answers instead of typing them as part of the study’s accessibility features." }, "ef_completed_by___1": { - "description": "" + "description": "Indicates if the responses in the survey were completed by the participant themselves." }, "ef_completed_by___2": { - "description": "" + "description": "Indicates if the responses in the survey were completed by an assistant." }, "ef_completed_by___3": { - "description": "" + "description": "Indicates if the responses in the survey were completed by a parent or caregiver." }, "ef_primary_language": { - "description": "" + "description": "Indicates the primary language spoken by the participant." }, "ef_primary_language_other": { - "description": "" + "description": "If the participant's primary language is not listed, this field specifies the language." }, "ef_fluent_languages___1": { - "description": "" + "description": "Indicates if the participant speaks no additional languages fluently." }, "ef_fluent_languages___2": { - "description": "" + "description": "Indicates if the participant speaks English fluently in addition to their primary language." }, "ef_fluent_languages___3": { - "description": "" + "description": "Indicates if the participant speaks French fluently in addition to their primary language." }, "ef_fluent_languages___4": { - "description": "" + "description": "Indicates if the participant speaks Spanish fluently in addition to their primary language." }, "ef_fluent_languages___5": { - "description": "" + "description": "Indicates if the participant speaks any other language fluently, and provides the details." }, "ef_fluent_language_other": { - "description": "" + "description": "If the participant speaks another language fluently that is not listed, this field specifies the language." }, "diagnosis_vfp_gsd": { - "description": "" - }, - "diagnosis_vfp_ds": { - "description": "" + "description": "Indicates if the participant has vocal fold paralysis (VFP) confirmed by laryngoscopy or stroboscopy." }, "diagnosis_vfp_etiology": { - "description": "" + "description": "Specifies the etiology or cause of the participant’s vocal fold paralysis (VFP)." }, "diagnosis_vfp_iatrogenic": { - "description": "" + "description": "Indicates if the participant's vocal fold paralysis (VFP) is related to surgery or intubation." }, "diagnosis_vfp_tumor": { - "description": "" + "description": "Indicates if the participant’s vocal fold paralysis (VFP) is caused by a tumor invading the recurrent laryngeal nerve (RLN)." }, "diagnosis_vfp_dse": { - "description": "" + "description": "Specifies the degree of the participant’s glottic gap." }, "diagnosis_degree_os": { - "description": "" + "description": "Indicates the overall severity of the participant’s vocal fold paralysis (VFP)." }, "diagnosis_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the overall severity of the participant’s condition." }, "diagnosis_degree_r": { - "description": "" + "description": "Indicates the roughness of the participant’s voice." }, "diagnosis_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice." }, "diagnosis_degree_b": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice." }, "diagnosis_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice." }, "diagnosis_degree_s": { - "description": "" + "description": "Indicates the strain in the participant’s voice." }, "diagnosis_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice." }, "diagnosis_degree_p": { - "description": "" + "description": "Indicates the pitch of the participant’s voice." }, "diagnosis_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice." }, "diagnosis_degree_l": { - "description": "" + "description": "Indicates the loudness of the participant’s voice." }, "diagnosis_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice." }, "diagnosis_degree_comments": { - "description": "" - }, - "diagnosis_vfp_treatment": { - "description": "" - }, - "diagnosis_vfp_treatment_surgery": { - "description": "" - }, - "diagnosis_vfp_treatment_surgery_thyroplasty": { - "description": "" - }, - "diagnosis_vfp_treatment_surgery_vfia": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice." }, "diagnosis_ld_qete___laryngologist": { - "description": "" + "description": "Indicates if the participant's laryngeal dystonia was determined by a laryngologist as part of the qualitative expert team evaluation." }, "diagnosis_ld_qete___speech_language_pathology": { - "description": "" + "description": "Indicates if the participant's laryngeal dystonia was determined by a speech-language pathologist as part of the qualitative expert team evaluation." }, "diagnosis_ld_qete___neurologist_specializing_disorders": { - "description": "" + "description": "Indicates if the participant's laryngeal dystonia was determined by a neurologist specializing in movement disorders as part of the qualitative expert team evaluation." }, "diagnosis_ld_assessment___aural_perceptual_evaluation": { - "description": "" + "description": "Indicates if the participant underwent an aural-perceptual evaluation as part of their laryngeal dystonia assessment." }, "diagnosis_ld_assessment___laryngoscopy_or_stroboscopy": { - "description": "" + "description": "Indicates if the participant underwent laryngoscopy or stroboscopy as part of their laryngeal dystonia assessment." }, "diagnosis_ld_assessment___neurological_evaluation": { - "description": "" + "description": "Indicates if the participant underwent a neurological evaluation as part of their laryngeal dystonia assessment." }, "diagnosis_ld_ds___adld": { - "description": "" + "description": "Indicates if the participant has adductor laryngeal dystonia (ADLD)." }, "diagnosis_ld_ds___abld": { - "description": "" + "description": "Indicates if the participant has abductor laryngeal dystonia (ABLD)." }, "diagnosis_ld_ds___vocal_tremor": { - "description": "" + "description": "Indicates if the participant has vocal tremor." }, "diagnosis_ld_ds___mixed_laryngeal_dystonia": { - "description": "" + "description": "Indicates if the participant has mixed laryngeal dystonia." }, "diagnosis_ld_ds___sld": { - "description": "" + "description": "Indicates if the participant has singer's laryngeal dystonia (SLD)." }, "diagnosis_ld_ds___arld": { - "description": "" + "description": "Indicates if the participant has adductor laryngeal spasms during inspiration (ARLD)." }, "diagnosis_ld_etiology": { - "description": "" + "description": "Specifies the etiology or cause of the participant’s laryngeal dystonia." }, "diagnosis_ld_etiology_cc___essential_tremor_of_the_hands": { - "description": "" + "description": "Indicates if the participant has an essential tremor of the hands." }, "diagnosis_ld_etiology_cc___essential_tremor_of_the_head": { - "description": "" + "description": "Indicates if the participant has an essential tremor of the head." }, "diagnosis_ld_etiology_cc___jaw_tremor": { - "description": "" + "description": "Indicates if the participant has a jaw tremor." }, "diagnosis_ld_etiology_cc___dystonia_of_the_head_and_neck": { - "description": "" + "description": "Indicates if the participant has dystonia of the head and neck." }, "diagnosis_ld_etiology_cc___other_type_of_dystonia": { - "description": "" + "description": "Indicates if the participant has another type of dystonia." }, "diagnosis_ld_degree_os_1": { - "description": "" + "description": "Indicates the participant's overall severity of laryngeal dystonia." }, "diagnosis_ld_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the participant's overall severity of laryngeal dystonia." }, "diagnosis_ld_degree_r_1": { - "description": "" + "description": "Indicates the roughness of the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_b_1": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_s_1": { - "description": "" + "description": "Indicates the strain in the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_p_1": { - "description": "" + "description": "Indicates the pitch of the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_l_1": { - "description": "" + "description": "Indicates the loudness of the participant’s voice as a result of laryngeal dystonia." }, "diagnosis_ld_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_degree_comments": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice due to laryngeal dystonia." }, "diagnosis_ld_treatment": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___botox_injections": { - "description": "" + "description": "Indicates if the participant has received botox injections as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___voice_or_speech_therapy": { - "description": "" + "description": "Indicates if the participant has undergone voice or speech therapy as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___vibrotactile_stimulation": { - "description": "" + "description": "Indicates if the participant has undergone vibrotactile stimulation as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___deep_brain_stimulation": { - "description": "" + "description": "Indicates if the participant has undergone deep brain stimulation as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___mrgfus": { - "description": "" + "description": "Indicates if the participant has undergone magnetic resonance-guided focused ultrasound (MRgFUS) as a treatment for laryngeal dystonia." }, "diagnosis_ld_treatment_select___other": { - "description": "" + "description": "Indicates if the participant has undergone other treatments for laryngeal dystonia." }, "diagnosis_ld_treatment_bi_li": { - "description": "" + "description": "Specifies when the participant received their last injection as treatment for laryngeal dystonia." }, "diagnois_pl_gsd_ls": { - "description": "" + "description": "Indicates if the participant has a precancerous vocal fold lesion confirmed by laryngoscopy or stroboscopy." }, "diagnois_pl_gsd_bp": { - "description": "" + "description": "Indicates if the participant has a precancerous vocal fold lesion confirmed by biopsy or pathology." }, "diagnosis_pl_ds___keratosis": { - "description": "" + "description": "Indicates if the participant has been diagnosed with keratosis." }, "diagnosis_pl_ds___leukoplakia": { - "description": "" + "description": "Indicates if the participant has been diagnosed with leukoplakia." }, "diagnosis_pl_ds___erythroplakia": { - "description": "" + "description": "Indicates if the participant has been diagnosed with erythroplakia." }, "diagnosis_pl_ds___other": { - "description": "" + "description": "Indicates if the participant has been diagnosed with another precancerous lesion." }, "diagnosis_pl_ds_l": { - "description": "" + "description": "Indicates if the participant has leukoplakia." }, "diagnosis_pl_ds_l_wd_g": { - "description": "" + "description": "Indicates if the participant has leukoplakia with dysplasia." }, "diagnosis_pl_ds_e": { - "description": "" + "description": "Indicates if the participant has erythroplakia." }, "diagnosis_pl_ds_e_wd_g": { - "description": "" + "description": "Indicates if the participant has erythroplakia with dysplasia." }, "diagnosis_pl_etiology___past_or_present_smoking": { - "description": "" + "description": "Indicates if the participant has a history of smoking as a risk factor for their precancerous lesion." }, "diagnosis_pl_etiology___laryngopharyngeal_reflux": { - "description": "" + "description": "Indicates if the participant has laryngopharyngeal reflux as a risk factor for their precancerous lesion." }, "diagnosis_pl_etiology___other_irritants": { - "description": "" + "description": "Indicates if the participant has other irritants as risk factors for their precancerous lesion." }, "diagnosis_pl_ds_ll___right_vocal_fold": { - "description": "" + "description": "Indicates if the participant's lesion is located on the right vocal fold." }, "diagnosis_pl_ds_ll___left_vocal_fold": { - "description": "" + "description": "Indicates if the participant's lesion is located on the left vocal fold." }, "diagnosis_pl_ds_ll___both_vocal_folds": { - "description": "" + "description": "Indicates if the participant's lesion is located on both vocal folds." }, "diagnosis_pl_ds_ll___ventricular_folds": { - "description": "" + "description": "Indicates if the participant's lesion is located on the ventricular folds." }, "diagnosis_pl_ds_ll___subglottal_areas": { - "description": "" + "description": "Indicates if the participant's lesion is located in the subglottal areas." }, "diagnosis_pl_degree_os_1": { - "description": "" + "description": "Indicates the overall severity of the participant’s precancerous lesion." }, "diagnosis_pl_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the overall severity of the participant’s precancerous lesion." }, "diagnosis_pl_degree_r_1": { - "description": "" + "description": "Indicates the roughness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_b_1": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_s_1": { - "description": "" + "description": "Indicates the strain in the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_p_1": { - "description": "" + "description": "Indicates the pitch of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_l_1": { - "description": "" + "description": "Indicates the loudness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_comments": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_treatment": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___surveillance_only": { - "description": "" + "description": "Indicates if the participant is under surveillance only as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___laser_resection": { - "description": "" + "description": "Indicates if the participant has undergone laser resection as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___laser_ablation": { - "description": "" + "description": "Indicates if the participant has undergone laser ablation as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___microlaryngeal_surgery_without_laser": { - "description": "" + "description": "Indicates if the participant has undergone microlaryngeal surgery without laser as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___radiotherapy_persistent_or_recurrent_lesions": { - "description": "" + "description": "Indicates if the participant has undergone radiotherapy for persistent or recurrent lesions." }, "diagnosis_pl_treatment_select___voice_or_speech_therapy": { - "description": "" + "description": "Indicates if the participant has undergone voice or speech therapy as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___other": { - "description": "" + "description": "Indicates if the participant has undergone other treatments for their precancerous lesion." }, "diagnois_lc_gsd_sll": { - "description": "" + "description": "Indicates if the participant has a suspicious laryngeal lesion confirmed by laryngoscopy or stroboscopy." }, "diagnosis_lc_gsd_bpr": { - "description": "" + "description": "Indicates if the participant has laryngeal cancer confirmed by biopsy or pathology report." }, "diagnosis_lc_gsd_uots___ct_neck": { - "description": "" + "description": "Indicates if the participant has undergone a CT of the neck as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_gsd_uots___ct_chest": { - "description": "" + "description": "Indicates if the participant has undergone a CT of the chest as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_gsd_uots___mri_neck": { - "description": "" + "description": "Indicates if the participant has undergone an MRI of the neck as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_gsd_uots___pet_ct": { - "description": "" + "description": "Indicates if the participant has undergone a PET-CT as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_gsd_uots___ultrasound_neck": { - "description": "" + "description": "Indicates if the participant has undergone an ultrasound of the neck as part of their laryngeal cancer diagnosis." }, "diagnosis_lc_ds___right_vocal_fold": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the right vocal fold." }, "diagnosis_lc_ds___left_vocal_fold": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the left vocal fold." }, "diagnosis_lc_ds___both_vocal_folds": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves both vocal folds." }, "diagnosis_lc_ds___anterior_commissure": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the anterior commissure." }, "diagnosis_lc_ds___ventricular_folds": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the ventricular folds." }, "diagnosis_lc_ds___subglottal_areas": { - "description": "" + "description": "Indicates if the participant’s laryngeal cancer involves the subglottal areas." }, "diagnosis_lc_etiology___smoking": { - "description": "" + "description": "Indicates if smoking is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_etiology___alcohol": { - "description": "" + "description": "Indicates if alcohol use is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_etiology___family_history": { - "description": "" + "description": "Indicates if family history is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_etiology___hpv": { - "description": "" + "description": "Indicates if human papilloma virus (HPV) is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_etiology___exposure_other_harmful_substances": { - "description": "" + "description": "Indicates if exposure to other harmful substances is a risk factor for the participant’s laryngeal cancer." }, "diagnosis_lc_ds_t_stage": { - "description": "" + "description": "Indicates the T stage of the participant’s laryngeal cancer according to the AJCC Classification." }, "diagnosis_lc_ds_n_stage": { - "description": "" + "description": "Indicates the N stage of the participant’s laryngeal cancer according to the AJCC Classification." }, "diagnosis_lc_ds_m_stage": { - "description": "" + "description": "Indicates the M stage of the participant’s laryngeal cancer according to the AJCC Classification." }, "diagnosis_lc_degree_os_1": { - "description": "" + "description": "Indicates the overall severity of the participant’s laryngeal cancer." }, "diagnosis_lc_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the overall severity of the participant’s laryngeal cancer." }, "diagnosis_lc_degree_r_1": { - "description": "" + "description": "Indicates the roughness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_b_1": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_s_1": { - "description": "" + "description": "Indicates the strain in the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_p_1": { - "description": "" + "description": "Indicates the pitch of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_l_1": { - "description": "" + "description": "Indicates the loudness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice due to laryngeal cancer." }, "diagnosis_lc_degree_comments": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice due to laryngeal cancer." }, "diagnosis_as_ds_ccsr": { - "description": "" + "description": "Indicates if the participant’s cancer is causing stridor at rest." }, "diagnosis_lc_treatment": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___radiation": { - "description": "" + "description": "Indicates if the participant has undergone radiation as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___chemotherapy": { - "description": "" + "description": "Indicates if the participant has undergone chemotherapy as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___immunotherapy": { - "description": "" + "description": "Indicates if the participant has undergone immunotherapy as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___surgery": { - "description": "" + "description": "Indicates if the participant has undergone surgery as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___voice_or_speech_therapy": { - "description": "" + "description": "Indicates if the participant has undergone voice or speech therapy as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_select___other": { - "description": "" + "description": "Indicates if the participant has undergone other treatments for laryngeal cancer." }, "diagnosis_lc_treatment_s___endoscopic_laser": { - "description": "" + "description": "Indicates if the participant has undergone endoscopic laser surgery as treatment for laryngeal cancer." }, "diagnosis_lc_treatment_s___partial_laryngectomy": { - "description": "" + "description": "Indicates if the participant has undergone partial laryngectomy as treatment for laryngeal cancer." }, "diagnois_bl_gsd": { - "description": "" + "description": "Indicates if the participant has a benign lesion confirmed by laryngoscopy or stroboscopy." }, "diagnosis_bl_ds": { - "description": "" + "description": "Indicates the participant’s diagnosis of a benign lesion." }, "diagnosis_bl_etiology": { - "description": "" + "description": "Specifies the etiology or cause of the participant’s benign lesion." }, "diagnosis_bl_ds_ll": { - "description": "" + "description": "Indicates the location of the participant’s benign lesion." }, "diagnosis_bl_degree_os_1": { - "description": "" + "description": "Indicates the overall severity of the participant’s benign lesion." }, "diagnosis_bl_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the overall severity of the participant’s benign lesion." }, "diagnosis_bl_degree_r_1": { - "description": "" + "description": "Indicates the roughness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_b_1": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_s_1": { - "description": "" + "description": "Indicates the strain in the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_p_1": { - "description": "" + "description": "Indicates the pitch of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_l_1": { - "description": "" + "description": "Indicates the loudness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice due to the benign lesion." }, "diagnosis_bl_degree_comments": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice due to the benign lesion." }, "diagnosis_bl_treatment": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for the benign lesion." }, "diagnosis_bl_treatment_select___voice_or_speech_therapy": { - "description": "" + "description": "Indicates if the participant has undergone voice or speech therapy as treatment for the benign lesion." }, "diagnosis_bl_treatment_select___laryngeal_microsurgery": { - "description": "" + "description": "Indicates if the participant has undergone laryngeal microsurgery as treatment for the benign lesion." }, "diagnosis_bl_treatment_select___voice_rest": { - "description": "" + "description": "Indicates if the participant has undergone voice rest as treatment for the benign lesion." }, "diagnosis_bl_treatment_select___other": { - "description": "" + "description": "Indicates if the participant has undergone other treatments for the benign lesion." }, "diagnosis_bl_treatment_lm": { - "description": "" + "description": "Indicates if the participant has undergone laryngeal microsurgery for the benign lesion." }, "diagnosis_bipolar_gsd": { - "description": "" + "description": "Specifies the participant’s diagnosis of bipolar disorder." }, "diagnosis_bipolar_gsd_interview": { - "description": "" + "description": "Indicates if a structured clinical interview was conducted for diagnosing the participant’s bipolar disorder." }, "diagnosis_bipolar_gsd_oqu": { - "description": "" + "description": "Indicates if an objective questionnaire was used in the diagnosis of the participant’s bipolar disorder." }, "diagnosis_bipolar_gsd_oquw": { - "description": "" + "description": "Specifies which objective questionnaire was used in diagnosing the participant’s bipolar disorder." }, "diagnosis_bipolar_subtype_active": { - "description": "" + "description": "Specifies the active subtype of the participant’s bipolar disorder." }, "diagnosis_bipolar_psychotic": { - "description": "" + "description": "Indicates if the participant has psychotic symptoms associated with bipolar disorder." }, "diagnosis_bipolar_severity": { - "description": "" + "description": "Indicates the severity of the participant’s bipolar disorder." }, "diagnosis_depression_gsd": { - "description": "" + "description": "Indicates the participant’s diagnosis of depression." }, "diagnosis_depression_clinical_subcategory": { - "description": "" + "description": "Specifies the subcategory of clinical depression, such as major depressive disorder, for the participant." }, "diagnosis_depression_gsd_interview": { - "description": "" + "description": "Indicates if a structured clinical interview was conducted for diagnosing the participant’s depression." }, "diagnosis_depression_gsd_oqu": { - "description": "" + "description": "Indicates if an objective questionnaire was used in the diagnosis of the participant’s depression." }, "diagnosis_depression_gsd_oquw": { - "description": "" + "description": "Specifies which objective questionnaire was used in diagnosing the participant’s depression." }, "diagnosis_bipolar_subtype_active_depression": { - "description": "" + "description": "Specifies the active subtype of depression in the participant’s bipolar disorder." }, "diagnosis_bipolar_psychotic_depression": { - "description": "" + "description": "Indicates if the participant has psychotic symptoms associated with the depressive phase of their bipolar disorder." }, "diagnosis_bipolar_severity_depression": { - "description": "" + "description": "Indicates the severity of the participant’s depressive phase of bipolar disorder." }, "diagnosis_as_pft": { - "description": "" + "description": "Indicates if the participant has undergone pulmonary function testing in the past three months." }, "diagnosis_as_gsd": { - "description": "" + "description": "Indicates if the participant has airway stenosis confirmed by laryngoscopy, bronchoscopy, or CT imaging." }, "diagnosis_as_gsd_yes___bronchoscopy": { - "description": "" + "description": "Indicates if the participant’s airway stenosis was confirmed by bronchoscopy or laryngoscopy." }, "diagnosis_as_gsd_yes___ct": { - "description": "" + "description": "Indicates if the participant’s airway stenosis was confirmed by CT imaging." }, "diagnosis_as_ds": { - "description": "" + "description": "Specifies the subtype of the participant’s airway stenosis." }, "diagnosis_as_ds_bvfi_gs": { - "description": "" + "description": "Indicates if the participant has bilateral vocal fold immobility or glottic stenosis as a subtype of airway stenosis." }, "diagnosis_as_etiology": { - "description": "" + "description": "Specifies the etiology or cause of the participant’s airway stenosis." }, "diagnosis_as_etiology_auto_immune": { - "description": "" + "description": "Indicates if the participant’s airway stenosis is caused by an autoimmune or granulomatous disease." }, "diagnosis_as_ds_mcg": { - "description": "" + "description": "Indicates the degree of the participant’s stenosis based on the Myer-Cotton Grade." }, "diagnosis_as_ds_bc": { - "description": "" + "description": "Indicates the degree of the participant’s stenosis based on the Bogdasarian Classification." }, "diagnosis_as_ds_agw": { - "description": "" + "description": "Indicates the anterior glottic web classification of the participant’s airway stenosis according to Cohen." }, "diagnosis_as_ds_ac": { - "description": "" + "description": "Indicates the grade of stenosis of the participant’s supraglottic stenosis according to the Aziz Classification." }, "diagnosis_as_ds_ac_grade_4": { - "description": "" + "description": "Indicates the grade of supraglottic stenosis based on the Aziz Classification." }, "diagnosis_as_ds_ods": { - "description": "" + "description": "Indicates the overall subjective classification of the participant’s airway stenosis." }, "diagnosis_as_ds_eps": { - "description": "" + "description": "Indicates the estimated percentage of stenosis from 0 to 100." }, "diagnosis_as_treatment___no_treatment": { - "description": "" + "description": "Indicates if the participant has received no treatment for their airway stenosis." }, "diagnosis_as_treatment___surgery": { - "description": "" + "description": "Indicates if the participant has undergone surgery as treatment for their airway stenosis." }, "diagnosis_as_treatment___in_office_treatment": { - "description": "" + "description": "Indicates if the participant has undergone in-office treatment for their airway stenosis." }, "diagnosis_as_treatment_surgery___endoscopic_intervention": { - "description": "" + "description": "Indicates if the participant has undergone endoscopic intervention with laser and balloon dilation and steroid injection as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___endoscopic_excision": { - "description": "" + "description": "Indicates if the participant has undergone endoscopic laser wedge excision with balloon dilation and steroid injection as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___laryngotracheal_reconstruction": { - "description": "" + "description": "Indicates if the participant has undergone open laryngotracheal reconstruction as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___laryngotracheoplasty": { - "description": "" + "description": "Indicates if the participant has undergone laryngotracheoplasty (Maddern procedure) as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___tracheostomy": { - "description": "" + "description": "Indicates if the participant has undergone a tracheostomy as surgery for airway stenosis." }, "diagnosis_as_treatment_surgery___other": { - "description": "" + "description": "Indicates if the participant has undergone another type of surgery for airway stenosis." }, "diagnosis_as_treatment_in_office___steroid_injections_sole": { - "description": "" + "description": "Indicates if the participant has undergone awake steroid injection(s) as the sole treatment for airway stenosis." }, "diagnosis_as_treatment_in_office___steroid_injections_adjunct": { - "description": "" + "description": "Indicates if the participant has undergone awake steroid injection(s) as an adjunct treatment for airway stenosis." }, "diagnosis_as_treatment_in_office___dilation": { - "description": "" + "description": "Indicates if the participant has undergone in-office or awake dilation as treatment for airway stenosis." }, "diagnosis_as_treatment_in_office___laser": { - "description": "" + "description": "Indicates if the participant has undergone in-office or awake laser treatment for airway stenosis." }, "diagnosis_alz_dementia_mci_causes": { - "description": "" + "description": "Indicates if other causes of cognitive or functional changes have been excluded in the participant’s diagnosis." }, "diagnosis_alz_dementia_mci_dt": { - "description": "" + "description": "Specifies the type of dementia or cognitive impairment in the participant." }, "diagnosis_alz_dementia_mci_etiology___genetic_factors": { - "description": "" + "description": "Indicates if genetic factors are suspected or known to be the etiology of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology___age_related_changes": { - "description": "" + "description": "Indicates if age-related changes are suspected or known to be the etiology of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology___other_medical_conditions": { - "description": "" + "description": "Indicates if other medical conditions, such as vascular factors or traumatic brain injury, are suspected or known to be the etiology of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology___substance_related": { - "description": "" + "description": "Indicates if substance-related factors, such as alcohol-induced cognitive impairment, are suspected or known to be the etiology of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology___other": { - "description": "" + "description": "Indicates if another etiology is suspected or known to be the cause of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology_gf___familial_alzheimers_disease": { - "description": "" + "description": "Indicates if familial Alzheimer’s disease is the genetic factor suspected or known to be the cause of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology_gf___apolipoprotein_e": { - "description": "" + "description": "Indicates if apolipoprotein E (APOE) ε4 allele is the genetic factor suspected or known to be the cause of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_etiology_gf___other_genetic_factors": { - "description": "" + "description": "Indicates if other genetic factors are suspected or known to be the cause of the participant’s cognitive impairment or dementia." }, "diagnosis_alz_dementia_mci_ds___mci": { - "description": "" + "description": "Indicates if the participant’s cognitive impairment is classified as mild cognitive impairment (MCI)." }, "diagnosis_alz_dementia_mci_ds___cdr": { - "description": "" + "description": "Indicates if the participant’s cognitive impairment is classified using the Clinical Dementia Rating (CDR) staging." }, "diagnosis_alz_dementia_mci_ds_cdr": { - "description": "" + "description": "Specifies the participant’s Clinical Dementia Rating (CDR) staging." }, "diagnosis_alz_dementia_mci_ca_rudas_score": { - "description": "" + "description": "Specifies the participant’s Rowland Universal Dementia Assessment Scale (RUDAS) score." }, "diagnosis_alz_dementia_mci_ca_mmse_score": { - "description": "" + "description": "Specifies the participant’s Mini-Mental State Examination (MMSE) score." }, "diagnosis_alz_dementia_mci_ca_moca_score": { - "description": "" + "description": "Specifies the participant’s Montreal Cognitive Assessment (MoCA) score." }, "diagnosis_alz_dementia_mci_ca_adas_cog_score": { - "description": "" + "description": "Specifies the participant’s Alzheimer’s Disease Assessment Scale-Cognitive Subscale (ADAS-Cog) score." }, "diagnosis_alz_dementia_mci_ca_other": { - "description": "" + "description": "Specifies if another cognitive assessment tool was used for the participant." }, "diagnosis_alz_dementia_mci_ca_other_score": { - "description": "" + "description": "Specifies the score from another cognitive assessment tool used for the participant." }, "diagnosis_alz_dementia_mci_treatment_obtained": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for Alzheimer’s disease, cognitive impairment, or other types of dementia." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes___medications": { - "description": "" + "description": "Indicates if the participant has taken medications as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes___npi": { - "description": "" + "description": "Indicates if the participant has received non-pharmacological interventions as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_medications___cholinesterase_inhibitors": { - "description": "" + "description": "Indicates if the participant has taken cholinesterase inhibitors, such as Donepezil, as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_medications___nmda_receptor_antagonist": { - "description": "" + "description": "Indicates if the participant has taken NMDA receptor antagonist, such as Memantine, as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_medications___other": { - "description": "" + "description": "Indicates if the participant has taken other medications as treatment for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___day_program": { - "description": "" + "description": "Indicates if the participant has participated in a day program as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___cognitive_simulation_therapy": { - "description": "" + "description": "Indicates if the participant has undergone cognitive stimulation therapy as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___reality_orientation_therapy": { - "description": "" + "description": "Indicates if the participant has undergone reality orientation therapy as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___reminiscence_therapy": { - "description": "" + "description": "Indicates if the participant has undergone reminiscence therapy as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___physical_exercise_program": { - "description": "" + "description": "Indicates if the participant has participated in a physical exercise program as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___dietary_modifications": { - "description": "" + "description": "Indicates if the participant has undergone dietary modifications as a non-pharmacological intervention for Alzheimer’s disease or cognitive impairment." }, "diagnosis_alz_dementia_mci_treatment_obtained_yes_npi___other": { - "description": "" + "description": "Indicates if the participant has undergone other non-pharmacological interventions for Alzheimer’s disease or cognitive impairment." }, "diagnosis_parkinsons_gsd_category_1___bradykinesia": { - "description": "" + "description": "Indicates if the participant has bradykinesia as part of their Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_1___tremor": { - "description": "" + "description": "Indicates if the participant has tremor as part of their Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_1___rigidity": { - "description": "" + "description": "Indicates if the participant has rigidity as part of their Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_1_calculation": { - "description": "" + "description": "Indicates if the participant meets the criteria for Category 1 Parkinsonism based on bradykinesia, tremor, or rigidity." }, "diagnosis_parkinsons_gsd_category_2___cerebellar_abnormalities": { - "description": "" + "description": "Indicates if the participant has cerebellar abnormalities as part of the exclusion criteria for Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_2___supranuclear_gaze_palsy": { - "description": "" + "description": "Indicates if the participant has supranuclear gaze palsy as part of the exclusion criteria for Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_2___bvf_ftd_ppa": { - "description": "" + "description": "Indicates if the participant has a diagnosis of behavioral variant frontotemporal dementia (bvFTD) or primary progressive aphasia (PPA) within five years of disease onset as part of the exclusion criteria for Parkinson’s disease diagnosis." }, "diagnosis_parkinsons_gsd_category_2___lower_limbs": { - "description": "" + "description": "Indicates if the participant’s Parkinsonian features are restricted to the lower limbs for more than three years as part of the exclusion criteria." }, "diagnosis_parkinsons_gsd_category_2___dopamine_treatment": { - "description": "" + "description": "Indicates if the participant has been treated with dopamine or related medications." }, "diagnosis_parkinsons_gsd_category_2___absence_of_response": { - "description": "" + "description": "Indicates if the participant shows no response in category 2 of the Parkinson's GSD assessment." }, "diagnosis_parkinsons_gsd_category_2___cortical_sensory_loss": { - "description": "" + "description": "Indicates if the participant has cortical sensory loss as part of Parkinson's GSD Category 2." }, "diagnosis_parkinsons_gsd_category_2___dat_scan": { - "description": "" + "description": "Indicates if the participant has undergone a DAT scan as part of Parkinson's GSD Category 2." }, "diagnosis_parkinsons_gsd_category_2___alternative_condition": { - "description": "" + "description": "Indicates if the participant has an alternative condition related to Parkinson's disease GSD Category 2." }, "diagnosis_parkinsons_gsd_category_2_calculation": { - "description": "" + "description": "Calculation for Parkinson's GSD Category 2 diagnosis." }, "diagnosis_parkinsons_gsd_category_3___response_dopaminergic_therapy": { - "description": "" + "description": "Indicates if the participant's Parkinson's diagnosis includes response to dopaminergic therapy under GSD category 3." }, "diagnosis_parkinsons_gsd_category_3___levodopa_induced_dyskinesia": { - "description": "" + "description": "Indicates if the participant has levodopa-induced dyskinesia as part of their Parkinson's diagnosis." }, "diagnosis_parkinsons_gsd_category_3___rest_tremor": { - "description": "" + "description": "Indicates if the participant's Parkinson's diagnosis includes rest tremor under GSD category 3." }, "diagnosis_parkinsons_gsd_category_3___mibg": { - "description": "" + "description": "Indicates if the participant's Parkinson's diagnosis includes MIBG in category 3 of the GSD assessment." }, "diagnosis_parkinsons_gsd_category_3_calculation": { - "description": "" + "description": "Calculation for Parkinson's GSD Category 3 diagnosis." }, "diagnosis_parkinsons_gsd_calculation": { - "description": "" + "description": "Calculated score for Parkinson's disease diagnosis based on the GSD (Global Severity of Disease) scale." }, "diagnosis_parkinsons_disease_subtype": { - "description": "" + "description": "Indicates the subtype of Parkinson's disease diagnosed in the participant." }, "diagnosis_parkinsons_etiology": { - "description": "" + "description": "Indicates the etiology or cause of the participant's Parkinson's diagnosis." }, "diagnosis_parkinsons_ds": { - "description": "" + "description": "Indicates the diagnostic subcategory of the participant's Parkinson's disease." }, "diagnosis_parkinsons_ma___updrs": { - "description": "" + "description": "Indicates the participant's motor assessment score on the UPDRS (Unified Parkinson's Disease Rating Scale)." }, "diagnosis_parkinsons_ma___other": { - "description": "" + "description": "Indicates if the participant has other motor assessment results for Parkinson's disease." }, "diagnosis_parkinsons_ma_uprds": { - "description": "" + "description": "Indicates the participant's score on the Unified Parkinson's Disease Rating Scale (UPDRS)." }, "diagnosis_parkinsons_ma_updrs_part_i_score": { - "description": "" + "description": "Score from Part I of the MDS-UPDRS, assessing non-motor aspects of daily living." }, "diagnosis_parkinsons_ma_updrs_part_ii_score": { - "description": "" + "description": "Score from Part II of the MDS-UPDRS, assessing the participant's activities of daily living." }, "diagnosis_parkinsons_ma_updrs_part_iii_score": { - "description": "" + "description": "Score from Part III of the MDS-UPDRS, assessing motor symptoms in Parkinson's disease." }, "diagnosis_parkinsons_ma_updrs_part_iv_score": { - "description": "" + "description": "Score from Part IV of the MDS-UPDRS, assessing complications of therapy in Parkinson's disease." }, "diagnosis_parkinsons_non_motor_symptoms": { - "description": "" + "description": "Indicates if the participant has non-motor symptoms associated with Parkinson's disease." }, "diagnosis_parkinsons_non_motor_symptoms_yes": { - "description": "" + "description": "Indicates specific non-motor symptoms that the participant experiences as part of Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained": { - "description": "" + "description": "Indicates if the participant has received treatment for Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained_yes___medications": { - "description": "" + "description": "Indicates if the participant is receiving medication for Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained_yes___npi": { - "description": "" + "description": "Indicates if the participant has received non-pharmacological interventions as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___levodopa": { - "description": "" + "description": "Indicates if the participant is receiving levodopa as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___dopamine_agonists": { - "description": "" + "description": "Indicates if the participant is receiving dopamine agonists as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___mao_b": { - "description": "" + "description": "Indicates if the participant is receiving MAO-B inhibitors as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___amantadine": { - "description": "" + "description": "Indicates if the participant is receiving Amantadine for Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_medications___other": { - "description": "" + "description": "Indicates if the participant is receiving other medications for Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___physical_therapy": { - "description": "" + "description": "Indicates if the participant has received physical therapy as a treatment for Parkinson's disease." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___occupational_therapy": { - "description": "" + "description": "Indicates if the participant is receiving occupational therapy as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___speech_therapy": { - "description": "" + "description": "Indicates if the participant has received speech therapy as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___dbs": { - "description": "" + "description": "Indicates if the participant has received deep brain stimulation (DBS) as part of Parkinson's treatment." }, "diagnosis_parkinsons_treatment_obtained_yes_npi___other": { - "description": "" + "description": "Indicates if the participant has received non-pharmacological treatment for Parkinson's, other than those specified." }, "diagnosis_als_gsd_category_1": { - "description": "" + "description": "Indicates the participant's ALS diagnosis under GSD category 1." }, "diagnosis_als_gsd_category_2": { - "description": "" + "description": "Indicates if the participant meets the criteria for ALS GSD Category 2." }, "diagnosis_als_gsd_category_3": { - "description": "" + "description": "Indicates the participant's ALS diagnosis under GSD category 3." }, "diagnosis_als_gsd_calculation": { - "description": "" + "description": "Calculation for the participant's ALS GSD diagnosis." }, "diagnosis_als_disease_subtype": { - "description": "" + "description": "Indicates the subtype of ALS diagnosed in the participant." }, "diagnosis_als_disease_subtype_familial": { - "description": "" + "description": "Indicates if the participant has been diagnosed with familial ALS." }, "diagnosis_als_etiology___genetic_factors": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to genetic factors." }, "diagnosis_als_etiology___environmental_factors": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to environmental factors." }, "diagnosis_als_etiology_genetic_factors___c9orf72": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to the C9orf72 genetic factor." }, "diagnosis_als_etiology_genetic_factors___sod1": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to the SOD1 genetic factor." }, "diagnosis_als_etiology_genetic_factors___other": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis is linked to other genetic factors not listed." }, "diagnosis_als_cp___upper_motor_neuron": { - "description": "" + "description": "Indicates if the participant's ALS diagnosis includes upper motor neuron involvement." }, "diagnosis_als_cp___lower_motor_neuron": { - "description": "" + "description": "Indicates if the participant has lower motor neuron involvement as part of their ALS diagnosis." }, "diagnosis_als_cp___bulbar_symptoms": { - "description": "" + "description": "Indicates if the participant has bulbar symptoms as part of their ALS diagnosis." }, "diagnosis_als_cp___respiratory_involvement": { - "description": "" + "description": "Indicates if the participant has respiratory involvement as part of their ALS diagnosis." }, "diagnosis_als_dp": { - "description": "" + "description": "Indicates if the participant has a diagnosis of ALS with dementia." }, "diagnosis_als_na_alsfrs_r_score": { - "description": "" + "description": "The participant's score on the ALS Functional Rating Scale-Revised (ALSFRS-R)." }, "diagnosis_als_na_fvc_percentage": { - "description": "" + "description": "Indicates the participant's forced vital capacity (FVC) percentage for ALS diagnosis." }, "diagnosis_als_treatment_and_management": { - "description": "" + "description": "Indicates the treatment and management plan for the participant's ALS diagnosis." }, "diagnosis_als_treatment_and_management_yes___medications": { - "description": "" + "description": "Indicates if the participant is receiving medications as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes___supportive_care": { - "description": "" + "description": "Indicates if the participant is receiving supportive care as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_medications___riluzole": { - "description": "" + "description": "Indicates if the participant is receiving riluzole as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_medications___edaravone": { - "description": "" + "description": "Indicates if the participant is receiving edaravone as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_medications___sodium": { - "description": "" + "description": "Indicates if the participant is receiving sodium as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_medications___tofersen": { - "description": "" + "description": "Indicates if the participant is receiving Tofersen as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_medications___symptomatic_treatment": { - "description": "" + "description": "Indicates if the participant is receiving symptomatic treatment as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_medications___other": { - "description": "" + "description": "Indicates if the participant is receiving other medications as part of ALS treatment." }, "diagnosis_als_treatment_and_management_yes_supportive_care___physical_therapy": { - "description": "" + "description": "Indicates if the participant has received physical therapy as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___occupational_therapy": { - "description": "" + "description": "Indicates if the participant is receiving occupational therapy as part of ALS treatment and supportive care." }, "diagnosis_als_treatment_and_management_yes_supportive_care___speech_therapy": { - "description": "" + "description": "Indicates if the participant has received speech therapy as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___respiratory_support": { - "description": "" + "description": "Indicates if the participant has received respiratory support as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___nutrition_support": { - "description": "" + "description": "Indicates if the participant has received nutrition support as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___psychotherapy": { - "description": "" + "description": "Indicates if the participant has received psychotherapy as part of ALS management." }, "diagnosis_als_treatment_and_management_yes_supportive_care___other": { - "description": "" + "description": "Indicates if the participant has received other forms of supportive care for ALS." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/phq9.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/phq9.json index 7ddd039..702b0b0 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/phq9.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/phq9.json @@ -1,35 +1,35 @@ { "phq_9_session_id": { - "description": "" + "description": "Unique identifier for the PHQ-9 session." }, "no_interest": { - "description": "" + "description": "Measures if the participant experiences a lack of interest or pleasure in daily activities." }, "feeling_depressed": { - "description": "" + "description": "Indicates if the participant feels depressed or down." }, "trouble_sleeping": { - "description": "" + "description": "Indicates if the participant has trouble sleeping." }, "no_energy": { - "description": "" + "description": "Indicates if the participant has no energy or feels fatigued." }, "no_appetite": { - "description": "" + "description": "Indicates if the participant has no appetite." }, "feeling_bad_self": { - "description": "" + "description": "Indicates if the participant feels bad about themselves." }, "trouble_concentrate": { - "description": "" + "description": "Indicates if the participant has trouble concentrating." }, "move_speak_slow": { - "description": "" + "description": "Indicates if the participant moves or speaks slowly." }, "thoughts_death": { - "description": "" + "description": "Indicates if the participant has thoughts of death or dying." }, "hard_to_work": { - "description": "" + "description": "Indicates if the participant has difficulty working due to their physical or mental health." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/precancerousLesions.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/precancerousLesions.json index b00bb4e..7198383 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/precancerousLesions.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/precancerousLesions.json @@ -1,119 +1,119 @@ { "diagnois_pl_gsd_ls": { - "description": "" + "description": "Indicates if the participant has a precancerous vocal fold lesion confirmed by laryngoscopy or stroboscopy." }, "diagnois_pl_gsd_bp": { - "description": "" + "description": "Indicates if the participant has a precancerous vocal fold lesion confirmed by biopsy or pathology." }, "diagnosis_pl_ds___keratosis": { - "description": "" + "description": "Indicates if the participant has been diagnosed with keratosis." }, "diagnosis_pl_ds___leukoplakia": { - "description": "" + "description": "Indicates if the participant has been diagnosed with leukoplakia." }, "diagnosis_pl_ds___erythroplakia": { - "description": "" + "description": "Indicates if the participant has been diagnosed with erythroplakia." }, "diagnosis_pl_ds___other": { - "description": "" + "description": "Indicates if the participant has been diagnosed with another precancerous lesion." }, "diagnosis_pl_ds_l": { - "description": "" + "description": "Indicates if the participant has leukoplakia." }, "diagnosis_pl_ds_l_wd_g": { - "description": "" + "description": "Indicates if the participant has leukoplakia with dysplasia." }, "diagnosis_pl_ds_e": { - "description": "" + "description": "Indicates if the participant has erythroplakia." }, "diagnosis_pl_ds_e_wd_g": { - "description": "" + "description": "Indicates if the participant has erythroplakia with dysplasia." }, "diagnosis_pl_etiology___past_or_present_smoking": { - "description": "" + "description": "Indicates if the participant has a history of smoking as a risk factor for their precancerous lesion." }, "diagnosis_pl_etiology___laryngopharyngeal_reflux": { - "description": "" + "description": "Indicates if the participant has laryngopharyngeal reflux as a risk factor for their precancerous lesion." }, "diagnosis_pl_etiology___other_irritants": { - "description": "" + "description": "Indicates if the participant has other irritants as risk factors for their precancerous lesion." }, "diagnosis_pl_ds_ll___right_vocal_fold": { - "description": "" + "description": "Indicates if the participant's lesion is located on the right vocal fold." }, "diagnosis_pl_ds_ll___left_vocal_fold": { - "description": "" + "description": "Indicates if the participant's lesion is located on the left vocal fold." }, "diagnosis_pl_ds_ll___both_vocal_folds": { - "description": "" + "description": "Indicates if the participant's lesion is located on both vocal folds." }, "diagnosis_pl_ds_ll___ventricular_folds": { - "description": "" + "description": "Indicates if the participant's lesion is located on the ventricular folds." }, "diagnosis_pl_ds_ll___subglottal_areas": { - "description": "" + "description": "Indicates if the participant's lesion is located in the subglottal areas." }, "diagnosis_pl_degree_os_1": { - "description": "" + "description": "Indicates the overall severity of the participant’s precancerous lesion." }, "diagnosis_pl_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the overall severity of the participant’s precancerous lesion." }, "diagnosis_pl_degree_r_1": { - "description": "" + "description": "Indicates the roughness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_b_1": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_s_1": { - "description": "" + "description": "Indicates the strain in the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_p_1": { - "description": "" + "description": "Indicates the pitch of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_l_1": { - "description": "" + "description": "Indicates the loudness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_degree_comments": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice due to the precancerous lesion." }, "diagnosis_pl_treatment": { - "description": "" + "description": "Indicates if the participant has undergone any treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___surveillance_only": { - "description": "" + "description": "Indicates if the participant is under surveillance only as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___laser_resection": { - "description": "" + "description": "Indicates if the participant has undergone laser resection as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___laser_ablation": { - "description": "" + "description": "Indicates if the participant has undergone laser ablation as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___microlaryngeal_surgery_without_laser": { - "description": "" + "description": "Indicates if the participant has undergone microlaryngeal surgery without laser as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___radiotherapy_persistent_or_recurrent_lesions": { - "description": "" + "description": "Indicates if the participant has undergone radiotherapy for persistent or recurrent lesions." }, "diagnosis_pl_treatment_select___voice_or_speech_therapy": { - "description": "" + "description": "Indicates if the participant has undergone voice or speech therapy as treatment for their precancerous lesion." }, "diagnosis_pl_treatment_select___other": { - "description": "" + "description": "Indicates if the participant has undergone other treatments for their precancerous lesion." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/ptsd.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/ptsd.json index 0abc1ce..2e3919a 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/ptsd.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/ptsd.json @@ -1,38 +1,38 @@ { "ptsd_session_id": { - "description": "" + "description": "Unique identifier for the PTSD assessment session." }, "ptsd_duration": { - "description": "" + "description": "Reports the duration of post-traumatic stress disorder (PTSD) symptoms the participant is experiencing." }, "traumatic_event": { - "description": "" + "description": "Reports if the participant has experienced a traumatic event recently." }, "flashbacks": { - "description": "" + "description": "Indicates if the participant experiences flashbacks to stressful or traumatic events." }, "emotionally_upset": { - "description": "" + "description": "Indicates if the participant feels emotionally upset during the session." }, "avoiding_reminders": { - "description": "" + "description": "Indicates if the participant is avoiding reminders of traumatic events." }, "thinking_stressful_event": { - "description": "" + "description": "Reports if the participant is thinking about a stressful event during the session." }, "neg_emotional_state": { - "description": "" + "description": "Indicates if the participant is experiencing negative emotional states." }, "losing_interest": { - "description": "" + "description": "Indicates if the participant is losing interest in things they usually enjoy." }, "super_alert": { - "description": "" + "description": "Indicates if the participant is highly alert during the session." }, "feeling_jumpy": { - "description": "" + "description": "Indicates if the participant feels jumpy or anxious." }, "irritable": { - "description": "" + "description": "Indicates if the participant feels irritable or easily annoyed." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/random.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/random.json index 5acfbb9..d434ff3 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/random.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/random.json @@ -1,14 +1,14 @@ { "random_session_id": { - "description": "" + "description": "Unique identifier for a random session." }, "random_recording_acoustic_task_id": { - "description": "" + "description": "Unique identifier for a random recording acoustic task." }, "random_duration": { - "description": "" + "description": "Total duration of a randomly assigned task or session." }, "random_item_generation_category": { - "description": "" + "description": "Category assigned for random item generation in the session." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/stroop.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/stroop.json index e743dab..feb68ea 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/stroop.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/stroop.json @@ -1,146 +1,146 @@ { "stroop_session_id": { - "description": "" + "description": "Unique identifier for the Stroop session." }, "stroop_recording_acoustic_task_id": { - "description": "" + "description": "The unique identifier for the Stroop recording acoustic task." }, "stroop_duration": { - "description": "" + "description": "Total duration of the Stroop task." }, "stroop_item_stimulus_1": { - "description": "" + "description": "Stimulus presented for Stroop item 1." }, "stroop_item_color_1": { - "description": "" + "description": "Color identified by the participant for Stroop item 1." }, "stroop_item_time_1": { - "description": "" + "description": "Time taken to respond to Stroop item 1." }, "stroop_item_stimulus_2": { - "description": "" + "description": "Stimulus presented for Stroop item 2." }, "stroop_item_color_2": { - "description": "" + "description": "Color identified by the participant for Stroop item 2." }, "stroop_item_time_2": { - "description": "" + "description": "Measures the response time for Stroop task item 2." }, "stroop_item_stimulus_3": { - "description": "" + "description": "Stimulus presented for Stroop item 3." }, "stroop_item_color_3": { - "description": "" + "description": "Color identified by the participant for Stroop item 3." }, "stroop_item_time_3": { - "description": "" + "description": "Time taken by the participant to respond to Stroop item 3." }, "stroop_item_stimulus_4": { - "description": "" + "description": "Stimulus presented for Stroop item 4." }, "stroop_item_color_4": { - "description": "" + "description": "Indicates the color used in Stroop task item 4." }, "stroop_item_time_4": { - "description": "" + "description": "Time taken to respond to Stroop item 4." }, "stroop_item_stimulus_5": { - "description": "" + "description": "Stimulus presented for Stroop item 5." }, "stroop_item_color_5": { - "description": "" + "description": "Color identified by the participant for Stroop item 5." }, "stroop_item_time_5": { - "description": "" + "description": "Measures the response time for Stroop task item 5." }, "stroop_item_stimulus_6": { - "description": "" + "description": "Stimulus presented for Stroop item 6." }, "stroop_item_color_6": { - "description": "" + "description": "Color identified by the participant for Stroop item 6." }, "stroop_item_time_6": { - "description": "" + "description": "Measures the response time for Stroop task item 6." }, "stroop_item_stimulus_7": { - "description": "" + "description": "Stimulus presented for Stroop item 7." }, "stroop_item_color_7": { - "description": "" + "description": "Color identified by the participant for Stroop item 7." }, "stroop_item_time_7": { - "description": "" + "description": "Time taken to respond to Stroop item 7." }, "stroop_item_stimulus_8": { - "description": "" + "description": "Stimulus presented for Stroop item 8." }, "stroop_item_color_8": { - "description": "" + "description": "Color identified by the participant for Stroop item 8." }, "stroop_item_time_8": { - "description": "" + "description": "Time taken to respond to Stroop item 8." }, "stroop_item_stimulus_9": { - "description": "" + "description": "Stimulus presented for Stroop item 9." }, "stroop_item_color_9": { - "description": "" + "description": "Color identified by the participant for Stroop item 9." }, "stroop_item_time_9": { - "description": "" + "description": "Time taken to respond to Stroop item 9." }, "stroop_item_stimulus_10": { - "description": "" + "description": "Stimulus presented for Stroop item 10." }, "stroop_item_color_10": { - "description": "" + "description": "Color identified by the participant for Stroop item 10." }, "stroop_item_time_10": { - "description": "" + "description": "Time taken to respond to Stroop item 10." }, "stroop_item_stimulus_11": { - "description": "" + "description": "Stimulus presented for Stroop item 11." }, "stroop_item_color_11": { - "description": "" + "description": "Color identified by the participant for Stroop item 11." }, "stroop_item_time_11": { - "description": "" + "description": "Time taken to respond to Stroop item 11." }, "stroop_item_stimulus_12": { - "description": "" + "description": "Stimulus presented for Stroop item 12." }, "stroop_item_color_12": { - "description": "" + "description": "Color identified by the participant for Stroop item 12." }, "stroop_item_time_12": { - "description": "" + "description": "Time taken to respond to Stroop item 12." }, "stroop_item_stimulus_13": { - "description": "" + "description": "Stimulus presented for Stroop item 13." }, "stroop_item_color_13": { - "description": "" + "description": "Color identified by the participant for Stroop item 13." }, "stroop_item_time_13": { - "description": "" + "description": "Time taken to respond to Stroop item 13." }, "stroop_item_stimulus_14": { - "description": "" + "description": "Indicates the stimulus presented in Stroop task item 14." }, "stroop_item_color_14": { - "description": "" + "description": "Color identified by the participant for Stroop item 14." }, "stroop_item_time_14": { - "description": "" + "description": "Measures the response time for Stroop task item 14." }, "stroop_item_stimulus_15": { - "description": "" + "description": "Indicates the stimulus presented in Stroop task item 15." }, "stroop_item_color_15": { - "description": "" + "description": "Color identified by the participant for Stroop item 15." }, "stroop_item_time_15": { - "description": "" + "description": "Measures the response time for Stroop task item 15." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vhi10.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vhi10.json index 7c5e330..d2e92a1 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vhi10.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vhi10.json @@ -1,38 +1,38 @@ { "vhi_session_id": { - "description": "" + "description": "The unique identifier for the Voice Handicap Index session." }, "vhi_duration": { - "description": "" + "description": "Duration of the Voice Handicap Index session." }, "voice_difficult_hear": { - "description": "" + "description": "Indicates if the participant's voice is difficult to hear." }, "tough_to_understand": { - "description": "" + "description": "Indicates if the participant feels that their voice is tough to understand." }, "voice_restrict_social": { - "description": "" + "description": "Indicates if the participant's voice issues restrict their social activities." }, "left_out_convo": { - "description": "" + "description": "Reports if the participant felt left out of a conversation recently." }, "voice_lose_income": { - "description": "" + "description": "Indicates if the participant's voice issues have led to a loss of income." }, "strain_voice": { - "description": "" + "description": "Reports if the participant has experienced voice strain." }, "voice_clarity": { - "description": "" + "description": "Indicates if the participant’s voice is clear during the session." }, "voice_upsetting": { - "description": "" + "description": "Indicates if the participant finds their voice issues upsetting." }, "voice_handicapped": { - "description": "" + "description": "Indicates if the participant feels handicapped by their voice." }, "ask_whats_wrong_voice": { - "description": "" + "description": "Indicates if the participant asked what was wrong with their voice during the assessment." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vocab.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vocab.json index fbe7121..5748d62 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vocab.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vocab.json @@ -1,47 +1,47 @@ { "vocabulary_session_id": { - "description": "" + "description": "Unique session identifier for the vocabulary task." }, "vocabulary_recording_acoustic_task_id": { - "description": "" + "description": "The unique identifier for the vocabulary recording acoustic task." }, "vocabulary_duration": { - "description": "" + "description": "Duration of the vocabulary assessment." }, "vocabulary_item_word_1": { - "description": "" + "description": "Response for vocabulary word item 1." }, "vocabulary_item_difficulty_1": { - "description": "" + "description": "Indicates the participant's reported difficulty level for vocabulary item 1." }, "vocabulary_item_word_2": { - "description": "" + "description": "Response for vocabulary word item 2." }, "vocabulary_item_difficulty_2": { - "description": "" + "description": "Indicates the participant's reported difficulty level for vocabulary item 2." }, "vocabulary_item_word_3": { - "description": "" + "description": "Response for vocabulary word item 3." }, "vocabulary_item_difficulty_3": { - "description": "" + "description": "Indicates the participant's reported difficulty level for vocabulary item 3." }, "vocabulary_item_word_4": { - "description": "" + "description": "Response for vocabulary word item 4." }, "vocabulary_item_difficulty_4": { - "description": "" + "description": "Indicates the participant's reported difficulty level for vocabulary item 4." }, "vocabulary_item_word_5": { - "description": "" + "description": "Response for vocabulary word item 5." }, "vocabulary_item_difficulty_5": { - "description": "" + "description": "Indicates the participant's reported difficulty level for vocabulary item 5." }, "vocabulary_item_word_6": { - "description": "" + "description": "Response for vocabulary word item 6." }, "vocabulary_item_difficulty_6": { - "description": "" + "description": "Indicates the difficulty level reported by the participant for vocabulary item 6." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vocalFoldParalysis.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vocalFoldParalysis.json index cce34c5..6734af9 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vocalFoldParalysis.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/vocalFoldParalysis.json @@ -1,71 +1,56 @@ { "diagnosis_vfp_gsd": { - "description": "" - }, - "diagnosis_vfp_ds": { - "description": "" + "description": "Indicates if the participant has vocal fold paralysis (VFP) confirmed by laryngoscopy or stroboscopy." }, "diagnosis_vfp_etiology": { - "description": "" + "description": "Specifies the etiology or cause of the participant’s vocal fold paralysis (VFP)." }, "diagnosis_vfp_iatrogenic": { - "description": "" + "description": "Indicates if the participant's vocal fold paralysis (VFP) is related to surgery or intubation." }, "diagnosis_vfp_tumor": { - "description": "" + "description": "Indicates if the participant’s vocal fold paralysis (VFP) is caused by a tumor invading the recurrent laryngeal nerve (RLN)." }, "diagnosis_vfp_dse": { - "description": "" + "description": "Specifies the degree of the participant’s glottic gap." }, "diagnosis_degree_os": { - "description": "" + "description": "Indicates the overall severity of the participant’s vocal fold paralysis (VFP)." }, "diagnosis_degree_os_2": { - "description": "" + "description": "Indicates an alternative measure of the overall severity of the participant’s condition." }, "diagnosis_degree_r": { - "description": "" + "description": "Indicates the roughness of the participant’s voice." }, "diagnosis_degree_r_2": { - "description": "" + "description": "Indicates an alternative measure of the roughness of the participant’s voice." }, "diagnosis_degree_b": { - "description": "" + "description": "Indicates the breathiness of the participant’s voice." }, "diagnosis_degree_b_2": { - "description": "" + "description": "Indicates an alternative measure of the breathiness of the participant’s voice." }, "diagnosis_degree_s": { - "description": "" + "description": "Indicates the strain in the participant’s voice." }, "diagnosis_degree_s_2": { - "description": "" + "description": "Indicates an alternative measure of the strain in the participant’s voice." }, "diagnosis_degree_p": { - "description": "" + "description": "Indicates the pitch of the participant’s voice." }, "diagnosis_degree_p_2": { - "description": "" + "description": "Indicates an alternative measure of the pitch of the participant’s voice." }, "diagnosis_degree_l": { - "description": "" + "description": "Indicates the loudness of the participant’s voice." }, "diagnosis_degree_l_2": { - "description": "" + "description": "Indicates an alternative measure of the loudness of the participant’s voice." }, "diagnosis_degree_comments": { - "description": "" - }, - "diagnosis_vfp_treatment": { - "description": "" - }, - "diagnosis_vfp_treatment_surgery": { - "description": "" - }, - "diagnosis_vfp_treatment_surgery_thyroplasty": { - "description": "" - }, - "diagnosis_vfp_treatment_surgery_vfia": { - "description": "" + "description": "Provides additional comments about the resonance of the participant’s voice." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/voicePerception.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/voicePerception.json index 9aaf2ec..65e1d28 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/voicePerception.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/voicePerception.json @@ -1,11 +1,11 @@ { "voice_perception_session_id": { - "description": "" + "description": "Unique identifier for the voice perception session." }, "voice_perception_duration": { - "description": "" + "description": "Total duration of the voice perception assessment." }, "voice_quality_perception": { - "description": "" + "description": "Indicates the participant's perception of their voice quality." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/voiceSeverity.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/voiceSeverity.json index ac8dc9a..e2aa013 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/voiceSeverity.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/voiceSeverity.json @@ -1,11 +1,11 @@ { "voice_severity_session_id": { - "description": "" + "description": "Unique identifier for the voice severity session." }, "voice_severity_duration": { - "description": "" + "description": "Duration of the assessment for the severity of the participant's voice issues." }, "describe_the_severity_of_a": { - "description": "" + "description": "Asks the participant to describe the severity of a specific condition or symptom." } } diff --git a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/winograd.json b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/winograd.json index 843836d..51968af 100644 --- a/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/winograd.json +++ b/src/b2aiprep/prepare/resources/b2ai-data-bids-like-template/phenotype/winograd.json @@ -1,656 +1,845 @@ { "winograd_session_id": { - "description": "" + "description": "Unique identifier for the Winograd schema session." }, "winograd_duration": { - "description": "" + "description": "Total duration of the Winograd schema task." }, "winograd_score": { - "description": "" + "description": "The score for the Winograd schema challenge for the participant." }, "winograd_number_questions": { - "description": "" + "description": "The total number of Winograd questions presented to the participant." }, "winograd_questions_asked": { - "description": "" + "description": "The total number of Winograd questions asked during the session." }, "winograd_q_1": { - "description": "" + "description": "Response to Winograd question 1: 'Can the participant interpret social dynamics based on context?'" }, "winograd_q_2": { - "description": "" + "description": "Response to Winograd question 2: 'Can the participant interpret the outcome of an ambiguous scenario?'" }, "winograd_q_3": { - "description": "" + "description": "Response to Winograd question 3: 'Can the participant infer the intentions of others based on contextual clues?'" }, "winograd_q_4": { - "description": "" + "description": "Response to Winograd question 4: 'Can the participant resolve ambiguity in a situation involving social dynamics?'" }, "winograd_q_5": { - "description": "" + "description": "Response to Winograd question 5: 'Can the participant make inferences about an agent's actions based on context?'" }, "winograd_q_6": { - "description": "" + "description": "Response to Winograd question 6: 'Can the participant reason about an everyday scenario involving multiple agents?'" }, "winograd_q_7": { - "description": "" + "description": "Response to Winograd question 7: 'Can the participant make logical inferences about everyday situations?'" }, "winograd_q_8": { - "description": "" + "description": "Response to Winograd question 8: 'Can the participant infer the correct outcome in a scenario involving social dynamics?'" }, "winograd_q_9": { - "description": "" + "description": "Response to Winograd question 9: 'Does the participant understand cause and effect relationships in social interactions?'" }, "winograd_q_10": { - "description": "" + "description": "Response to Winograd question 10: 'Can the participant infer the correct outcome in a scenario involving social dynamics?'" }, "winograd_q_11": { - "description": "" + "description": "Response to Winograd question 11: 'Can the participant infer the correct outcome based on reasoning?'" }, "winograd_q_12": { - "description": "" + "description": "Response to Winograd question 12: 'Can the participant infer the intentions of others based on context?'" }, "winograd_q_13": { - "description": "" + "description": "Response to Winograd question 13: 'Can the participant reason about the effects of actions in a social scenario?'" }, "winograd_q_14": { - "description": "" + "description": "Response to Winograd question 14: 'Can the participant resolve ambiguity in a scenario involving multiple agents?'" }, "winograd_q_15": { - "description": "" + "description": "Response to Winograd question 15: 'Can the participant reason through cause and effect in a social scenario?'" }, "winograd_q_16": { - "description": "" + "description": "Response to Winograd question 16: 'Can the participant make logical inferences about cause and effect in a scenario?'" }, "winograd_q_17": { - "description": "" + "description": "Response to Winograd question 17: 'Can the participant infer the correct outcome in a scenario involving multiple agents?'" }, "winograd_q_18": { - "description": "" + "description": "Response to Winograd question 18: 'Can the participant use common sense reasoning to infer the outcome of a situation?'" }, "winograd_q_19": { - "description": "" + "description": "Response to Winograd question 19: 'Does the participant demonstrate the ability to understand cause and effect in a scenario?'" }, "winograd_q_20": { - "description": "" + "description": "Response to Winograd question 20: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" }, "winograd_q_21": { - "description": "" + "description": "Response to Winograd question 21: 'Can the participant reason through the effects of actions in a social scenario?'" }, "winograd_q_22": { - "description": "" + "description": "Response to Winograd question 22: 'Can the participant infer the correct outcome in a scenario involving multiple agents?'" }, "winograd_q_23": { - "description": "" + "description": "Response to Winograd question 23: 'Can the participant reason about the intentions of others based on contextual clues?'" }, "winograd_q_24": { - "description": "" + "description": "Response to Winograd question 24: 'Can the participant reason about the consequences of actions in an ambiguous situation?'" }, "winograd_q_25": { - "description": "" + "description": "Response to Winograd question 25: 'Does the participant demonstrate an understanding of cause and effect in social situations?'" }, "winograd_q_26": { - "description": "" + "description": "Response to Winograd question 26: 'Can the participant make inferences about social behaviors?'" }, "winograd_q_27": { - "description": "" + "description": "Response to Winograd question 27: 'Can the participant make logical inferences about the actions of others in a scenario?'" }, "winograd_q_28": { - "description": "" + "description": "Response to Winograd question 28: 'Can the participant reason logically about cause and effect?'" }, "winograd_q_29": { - "description": "" + "description": "Response to Winograd question 29: 'Does the participant demonstrate common-sense reasoning in a social scenario?'" }, "winograd_q_30": { - "description": "" + "description": "Response to Winograd question 30: 'Can the participant make logical deductions about social interactions?'" }, "winograd_q_31": { - "description": "" + "description": "Response to Winograd question 31: 'Does the participant understand logical cause and effect relationships?'" }, "winograd_q_32": { - "description": "" + "description": "Response to Winograd question 32: 'Can the participant recognize the logical outcomes of actions in social contexts?'" }, "winograd_q_33": { - "description": "" + "description": "Response to Winograd question 33: 'Can the participant infer the intentions of others based on contextual clues?'" }, "winograd_q_34": { - "description": "" + "description": "Response to Winograd question 34: 'Can the participant infer the correct outcome in a scenario involving multiple agents?'" }, "winograd_q_35": { - "description": "" + "description": "Response to Winograd question 35: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" }, "winograd_q_36": { - "description": "" + "description": "Response to Winograd question 36: 'Does the participant demonstrate common-sense reasoning in a scenario involving multiple agents?'" }, "winograd_q_37": { - "description": "" + "description": "Response to Winograd question 37: 'Does the participant demonstrate common-sense reasoning in resolving ambiguity in a social situation?'" }, "winograd_q_38": { - "description": "" + "description": "Response to Winograd question 38: 'Can the participant make logical inferences about the intentions of others in a scenario?'" }, "winograd_q_39": { - "description": "" + "description": "Response to Winograd question 39: 'Can the participant identify logical outcomes in a given situation?'" }, "winograd_q_40": { - "description": "" + "description": "Response to Winograd question 40: 'Can the participant make logical inferences about the actions of others in a social situation?'" }, "winograd_q_41": { - "description": "" + "description": "Response to Winograd question 41: 'Can the participant reason through ambiguity in a social situation?'" }, "winograd_q_42": { - "description": "" + "description": "Response to Winograd question 42: 'Can the participant infer the intentions of others based on contextual clues?'" }, "winograd_q_43": { - "description": "" + "description": "Response to Winograd question 43: 'Can the participant resolve ambiguous references in a text?'" }, "winograd_q_44": { - "description": "" + "description": "Response to Winograd question 44: 'Can the participant resolve ambiguity in an interpersonal situation?'" }, "winograd_q_45": { - "description": "" + "description": "Response to Winograd question 45: 'Does the participant understand abstract social concepts?'" }, "winograd_q_46": { - "description": "" + "description": "Response to Winograd question 46: 'Can the participant reason through ambiguity in a scenario involving multiple agents?'" }, "winograd_q_47": { - "description": "" + "description": "Response to Winograd question 47: 'Can the participant infer the correct outcome in a scenario involving social dynamics?'" }, "winograd_q_48": { - "description": "" + "description": "Response to Winograd question 48: 'Can the participant infer the correct outcome in a social situation involving multiple agents?'" }, "winograd_q_49": { - "description": "" + "description": "Response to Winograd question 49: 'Does the participant demonstrate an understanding of cause and effect in social interactions?'" }, "winograd_q_50": { - "description": "" + "description": "Response to Winograd question 50: 'Can the participant make logical inferences about the actions of others in a hypothetical scenario?'" }, "winograd_q_51": { - "description": "" + "description": "Response to Winograd question 51: 'Can the participant reason about the consequences of an action in a hypothetical situation?'" }, "winograd_q_52": { - "description": "" + "description": "Response to Winograd question 52: 'Can the participant make logical inferences about the actions of others in a social situation?'" }, "winograd_q_53": { - "description": "" + "description": "Response to Winograd question 53: 'Can the participant infer an action based on contextual cues?'" }, "winograd_q_54": { - "description": "" + "description": "Response to Winograd question 54: 'Does the participant demonstrate the ability to understand cause and effect in a hypothetical situation?'" }, "winograd_q_55": { - "description": "" + "description": "Response to Winograd question 55: 'Does the participant demonstrate an understanding of cause and effect in a hypothetical situation?'" }, "winograd_q_56": { - "description": "" + "description": "Response to Winograd question 56: 'Does the participant demonstrate common-sense reasoning in interpreting social dynamics?'" }, "winograd_q_57": { - "description": "" + "description": "Response to Winograd question 57: 'Can the participant make inferences based on actions in a social situation?'" }, "winograd_q_58": { - "description": "" + "description": "Response to Winograd question 58: 'Can the participant make logical inferences about the intentions of others in a social situation?'" }, "winograd_q_59": { - "description": "" + "description": "Response to Winograd question 59: 'Can the participant interpret the actions of others based on context?'" }, "winograd_q_60": { - "description": "" + "description": "Response to Winograd question 60: 'Can the participant resolve ambiguity in a scenario involving social interactions?'" }, "winograd_q_61": { - "description": "" + "description": "Response to Winograd question 61: 'Can the participant reason logically about consequences in social interactions?'" }, "winograd_q_62": { - "description": "" + "description": "Response to Winograd question 62: 'Can the participant infer the intentions of others based on contextual clues?'" }, "winograd_q_63": { - "description": "" + "description": "Response to Winograd question 63: 'Can the participant make logical deductions about cause and effect?'" }, "winograd_q_64": { - "description": "" + "description": "Response to Winograd question 64: 'Can the participant make logical inferences about the actions of others in a social scenario?'" }, "winograd_q_65": { - "description": "" + "description": "Response to Winograd question 65: 'Can the participant reason through social interactions in a hypothetical situation?'" }, "winograd_q_66": { - "description": "" + "description": "Response to Winograd question 66: 'Can the participant infer the correct outcome in a scenario involving multiple agents?'" }, "winograd_q_67": { - "description": "" + "description": "Response to Winograd question 67: 'Can the participant reason about the intentions of others based on the given context?'" }, "winograd_q_68": { - "description": "" + "description": "Response to Winograd question 68: 'Can the participant infer the correct outcome in a social situation involving multiple agents?'" }, "winograd_q_69": { - "description": "" + "description": "Response to Winograd question 69: 'Can the participant apply common sense reasoning to solve practical problems?'" }, "winograd_q_70": { - "description": "" + "description": "Response to Winograd question 70: 'Can the participant infer the intentions of others based on the given context?'" }, "winograd_q_71": { - "description": "" + "description": "Response to Winograd question 71: 'Can the participant infer the correct outcome in a situation involving social dynamics?'" }, "winograd_q_72": { - "description": "" + "description": "Response to Winograd question 72: 'Can the participant infer the correct outcome in an ambiguous scenario?'" }, "winograd_q_73": { - "description": "" + "description": "Response to Winograd question 73: 'Can the participant understand the intentions of others based on context?'" }, "winograd_q_74": { - "description": "" + "description": "Response to Winograd question 74: 'Does the participant demonstrate logical reasoning in the given scenario?'" }, "winograd_q_75": { - "description": "" + "description": "Response to Winograd question 75: 'Can the participant reason about cause and effect in complex scenarios?'" }, "winograd_q_76": { - "description": "" + "description": "Response to Winograd question 76: 'Can the participant infer the intentions of others based on the given context?'" }, "winograd_q_77": { - "description": "" + "description": "Response to Winograd question 77: 'Can the participant resolve ambiguity in a social scenario involving multiple agents?'" }, "winograd_q_78": { - "description": "" + "description": "Response to Winograd question 78: 'Can the participant infer the intentions of others in a hypothetical situation?'" }, "winograd_q_79": { - "description": "" + "description": "Response to Winograd question 79: 'Can the participant make logical inferences about the actions of others?'" }, "winograd_q_80": { - "description": "" + "description": "Response to Winograd question 80: 'Can the participant make logical inferences about the intentions of others in a social scenario?'" }, "winograd_q_81": { - "description": "" + "description": "Response to Winograd question 81: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" }, "winograd_q_82": { - "description": "" + "description": "Response to Winograd question 82: 'Can the participant reason about the effects of actions in a hypothetical scenario?'" }, "winograd_q_83": { - "description": "" + "description": "Response to Winograd question 83: 'Can the participant make logical inferences about the effects of actions in a hypothetical situation?'" }, "winograd_q_84": { - "description": "" + "description": "Response to Winograd question 84: 'Can the participant interpret the actions of others in a hypothetical scenario?'" }, "winograd_q_85": { - "description": "" + "description": "Response to Winograd question 85: 'Can the participant understand logical outcomes in everyday scenarios?'" }, "winograd_q_86": { - "description": "" + "description": "Response to Winograd question 86: 'Can the participant interpret actions of agents in an everyday situation?'" }, "winograd_q_87": { - "description": "" + "description": "Response to Winograd question 87: 'Can the participant reason about the relationships between agents in a hypothetical situation?'" }, "winograd_q_88": { - "description": "" + "description": "Response to Winograd question 88: 'Can the participant reason through ambiguity in a scenario involving social dynamics?'" }, "winograd_q_89": { - "description": "" + "description": "Response to Winograd question 89: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" }, "winograd_q_90": { - "description": "" + "description": "Response to Winograd question 90: 'Can the participant resolve ambiguity in a scenario involving multiple agents?'" }, "winograd_q_91": { - "description": "" + "description": "Response to Winograd question 91: 'Can the participant reason through social interactions in a hypothetical scenario?'" }, "winograd_q_92": { - "description": "" + "description": "Response to Winograd question 92: 'Can the participant infer logical outcomes in social scenarios?'" }, "winograd_q_93": { - "description": "" + "description": "Response to Winograd question 93: 'Can the participant reason through the effects of actions in a scenario involving social interactions?'" }, "winograd_q_94": { - "description": "" + "description": "Response to Winograd question 94: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" }, "winograd_q_95": { - "description": "" + "description": "Response to Winograd question 95: 'Can the participant predict outcomes in a hypothetical scenario?'" }, "winograd_q_96": { - "description": "" + "description": "Response to Winograd question 96: 'Can the participant make logical conclusions based on context?'" }, "winograd_q_97": { - "description": "" + "description": "Response to Winograd question 97: 'Can the participant understand the implications of an agent's action?'" }, "winograd_q_98": { - "description": "" + "description": "Response to Winograd question 98: 'Does the participant demonstrate understanding of social dynamics in a scenario?'" }, "winograd_q_99": { - "description": "" + "description": "Response to Winograd question 99: 'Does the participant demonstrate common-sense reasoning in interpreting social situations?'" }, "winograd_q_100": { - "description": "" + "description": "Response to Winograd question 100: 'Can the participant resolve ambiguity in a situation involving social dynamics?'" }, "winograd_q_101": { - "description": "" + "description": "Response to Winograd question 101: 'Can the participant reason about the consequences of an agent's actions in a hypothetical situation?'" }, "winograd_q_102": { - "description": "" + "description": "Response to Winograd question 102: 'Does the participant demonstrate the ability to make logical inferences in a social situation?'" }, "winograd_q_103": { - "description": "" + "description": "Response to Winograd question 103: 'Can the participant interpret the actions of an agent in context?'" }, "winograd_q_104": { - "description": "" + "description": "Response to Winograd question 104: 'Can the participant resolve ambiguity in a situation involving multiple agents?'" }, "winograd_q_105": { - "description": "" + "description": "Response to Winograd question 105: 'Can the participant resolve ambiguity in a complex situation involving multiple agents?'" }, "winograd_q_106": { - "description": "" + "description": "Response to Winograd question 106: 'Can the participant make logical inferences about the actions of others?'" }, "winograd_q_107": { - "description": "" + "description": "Response to Winograd question 107: 'Can the participant interpret the actions of others in a complex social situation?'" }, "winograd_q_108": { - "description": "" + "description": "Response to Winograd question 108: 'Does the participant demonstrate common-sense reasoning in interpreting social situations?'" }, "winograd_q_109": { - "description": "" + "description": "Response to Winograd question 109: 'Can the participant apply common sense reasoning to solve a given problem?'" }, "winograd_q_110": { - "description": "" + "description": "Response to Winograd question 110: 'Does the participant demonstrate an understanding of cause and effect in a social situation?'" }, "winograd_q_111": { - "description": "" + "description": "Response to Winograd question 111: 'Does the participant demonstrate an understanding of social dynamics in a scenario involving multiple agents?'" }, "winograd_q_112": { - "description": "" + "description": "Response to Winograd question 112: 'Can the participant predict the effects of an action in a scenario?'" }, "winograd_q_113": { - "description": "" + "description": "Response to Winograd question 113: 'Can the participant use common sense reasoning to solve problems in social situations?'" }, "winograd_q_114": { - "description": "" + "description": "Response to Winograd question 114: 'Can the participant resolve ambiguity in a social scenario involving multiple agents?'" }, "winograd_q_115": { - "description": "" + "description": "Response to Winograd question 115: 'Can the participant reason about the relationship between two agents based on context?'" }, "winograd_q_116": { - "description": "" + "description": "Response to Winograd question 116: 'Can the participant infer the correct outcome in a situation involving social dynamics?'" }, "winograd_q_117": { - "description": "" + "description": "Response to Winograd question 117: 'Can the participant reason logically in social situations?'" }, "winograd_q_118": { - "description": "" + "description": "Response to Winograd question 118: 'Can the participant make logical inferences in social interactions?'" }, "winograd_q_119": { - "description": "" + "description": "Response to Winograd question 119: 'Can the participant resolve ambiguity in a social situation involving multiple agents?'" }, "winograd_q_120": { - "description": "" + "description": "Response to Winograd question 120: 'Can the participant reason through a common sense problem involving multiple agents?'" }, "winograd_q_121": { - "description": "" + "description": "Response to Winograd question 121: 'Can the participant resolve ambiguity in a scenario involving social interactions?'" }, "winograd_q_122": { - "description": "" + "description": "Response to Winograd question 122: 'Does the participant understand the implications of an action?'" }, "winograd_q_123": { - "description": "" + "description": "Response to Winograd question 123: 'Can the participant resolve ambiguity in a situation involving social dynamics?'" }, "winograd_q_124": { - "description": "" + "description": "Response to Winograd question 124: 'Can the participant resolve ambiguity in a social situation involving multiple agents?'" }, "winograd_q_125": { - "description": "" + "description": "Response to Winograd question 125: 'Can the participant infer the correct outcome in a scenario involving multiple agents?'" }, "winograd_q_126": { - "description": "" + "description": "Response to Winograd question 126: 'Can the participant resolve ambiguity in a hypothetical situation?'" }, "winograd_q_127": { - "description": "" + "description": "Response to Winograd question 127: 'Can the participant reason through ambiguity in a situation involving social interactions?'" }, "winograd_q_128": { - "description": "" + "description": "Response to Winograd question 128: 'Can the participant make commonsense inferences in hypothetical scenarios?'" }, "winograd_q_129": { - "description": "" + "description": "Response to Winograd question 129: 'Can the participant resolve ambiguity in a scenario involving social interactions?'" }, "winograd_q_130": { - "description": "" + "description": "Response to Winograd question 130: 'Can the participant reason through ambiguity in a scenario involving social dynamics?'" }, "winograd_q_131": { - "description": "" + "description": "Response to Winograd question 131: 'Can the participant reason about the consequences of their actions?'" }, "winograd_q_132": { - "description": "" + "description": "Response to Winograd question 132: 'Can the participant resolve an ambiguity in a scenario involving multiple agents?'" }, "winograd_q_133": { - "description": "" + "description": "Response to Winograd question 133: 'Can the participant resolve ambiguity in a situation involving social interactions?'" }, "winograd_q_134": { - "description": "" + "description": "Response to Winograd question 134: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" }, "winograd_q_135": { - "description": "" + "description": "Response to Winograd question 135: 'Can the participant reason through ambiguity in a situation involving multiple agents?'" }, "winograd_q_136": { - "description": "" + "description": "Response to Winograd question 136: 'Can the participant infer the correct outcome in a social situation involving multiple agents?'" }, "winograd_q_137": { - "description": "" + "description": "Response to Winograd question 137: 'Can the participant reason about social dynamics in a hypothetical scenario?'" }, "winograd_q_138": { - "description": "" + "description": "Response to Winograd question 138: 'Can the participant make logical inferences about the actions of others in a scenario?'" }, "winograd_q_139": { - "description": "" + "description": "Response to Winograd question 139: 'Can the participant infer the motivations of others in a complex social interaction?'" }, "winograd_q_140": { - "description": "" + "description": "Response to Winograd question 140: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" }, "winograd_q_141": { - "description": "" + "description": "Response to Winograd question 141: 'Can the participant infer the intentions of others based on contextual clues?'" }, "winograd_q_142": { - "description": "" + "description": "Response to Winograd question 142: 'Can the participant infer the correct referent in an ambiguous sentence?'" }, "winograd_q_143": { - "description": "" + "description": "Response to Winograd question 143: 'Can the participant make logical inferences about the actions of others based on context?'" }, "winograd_q_144": { - "description": "" + "description": "Response to Winograd question 144: 'Does the participant demonstrate understanding of cause and effect in ambiguous situations?'" }, "winograd_q_145": { - "description": "" + "description": "Response to Winograd question 145: 'Does the participant demonstrate common-sense reasoning in a scenario involving multiple agents?'" }, "winograd_q_146": { - "description": "" + "description": "Response to Winograd question 146: 'Can the participant resolve ambiguity in a hypothetical scenario?'" }, "winograd_q_147": { - "description": "" + "description": "Response to Winograd question 147: 'Can the participant interpret the actions of others in a complex social situation?'" }, "winograd_q_148": { - "description": "" + "description": "Response to Winograd question 148: 'Does the participant demonstrate an understanding of cause and effect in a social scenario?'" }, "winograd_q_149": { - "description": "" + "description": "Response to Winograd question 149: 'Can the participant interpret the intentions of others in a scenario?'" }, "winograd_q_150": { - "description": "" + "description": "Response to Winograd question 150: 'Can the participant make logical inferences about the actions of others?'" }, "winograd_q_151": { - "description": "" + "description": "Response to Winograd question 151: 'Does the participant reason about outcomes in hypothetical situations involving social interactions?'" }, "winograd_q_152": { - "description": "" + "description": "Response to Winograd question 152: 'Does the participant understand how actions lead to specific outcomes in a given scenario?'" }, "winograd_q_153": { - "description": "" + "description": "Response to Winograd question 153: 'Can the participant interpret an action based on its context?'" }, "winograd_q_154": { - "description": "" + "description": "Response to Winograd question 154: 'Does the participant demonstrate an understanding of cause and effect in social situations?'" }, "winograd_q_155": { - "description": "" + "description": "Response to Winograd question 155: 'Can the participant reason through ambiguity in a scenario involving social dynamics?'" }, "winograd_q_156": { - "description": "" + "description": "Response to Winograd question 156: 'Can the participant predict the outcomes of interpersonal dynamics in a hypothetical scenario?'" }, "winograd_q_157": { - "description": "" + "description": "Response to Winograd question 157: 'Can the participant resolve ambiguity in a scenario involving multiple agents?'" }, "winograd_q_158": { - "description": "" + "description": "Response to Winograd question 158: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" }, "winograd_q_159": { - "description": "" + "description": "Response to Winograd question 159: 'Can the participant reason about the effects of actions in a social situation?'" }, "winograd_q_160": { - "description": "" + "description": "Response to Winograd question 160: 'Does the participant understand relationships between agents in a scenario?'" }, "winograd_q_161": { - "description": "" + "description": "Response to Winograd question 161: 'Does the participant demonstrate common-sense reasoning in interpreting social situations?'" }, "winograd_q_162": { - "description": "" + "description": "Response to Winograd question 162: 'Does the participant demonstrate common-sense reasoning in interpreting social situations?'" }, "winograd_q_163": { - "description": "" + "description": "Response to Winograd question 163: 'Can the participant resolve ambiguity in a scenario involving multiple agents?'" }, "winograd_q_164": { - "description": "" + "description": "Response to Winograd question 164: 'Does the participant understand the intentions of others based on contextual clues?'" }, "winograd_q_165": { - "description": "" + "description": "Response to Winograd question 165: 'Can the participant make logical inferences about the actions of others in a social situation?'" }, "winograd_q_166": { - "description": "" + "description": "Response to Winograd question 166: 'Can the participant make inferences about actions of agents in hypothetical scenarios?'" }, "winograd_q_167": { - "description": "" + "description": "Response to Winograd question 167: 'Can the participant reason about the intentions of others in a scenario involving social interactions?'" }, "winograd_q_168": { - "description": "" + "description": "Response to Winograd question 168: 'Can the participant resolve ambiguity in a scenario involving social interactions?'" }, "winograd_q_169": { - "description": "" + "description": "Response to Winograd question 169: 'Does the participant understand consequences in social interactions?'" }, "winograd_q_170": { - "description": "" + "description": "Response to Winograd question 170: 'Can the participant reason about the consequences of actions in a social situation?'" }, "winograd_q_171": { - "description": "" + "description": "Response to Winograd question 171: 'Does the participant demonstrate common-sense reasoning in resolving social conflicts?'" }, "winograd_q_172": { - "description": "" + "description": "Response to Winograd question 172: 'Can the participant reason about the consequences of actions in a social scenario?'" }, "winograd_q_173": { - "description": "" + "description": "Response to Winograd question 173: 'Can the participant interpret the actions of others in a hypothetical situation?'" }, "winograd_q_174": { - "description": "" + "description": "Response to Winograd question 174: 'Can the participant make logical inferences about the consequences of actions in a scenario?'" }, "winograd_q_175": { - "description": "" + "description": "Response to Winograd question 175: 'Can the participant make logical inferences about the effects of actions in a social context?'" }, "winograd_q_176": { - "description": "" + "description": "Response to Winograd question 176: 'Can the participant infer the correct outcome in a scenario involving social dynamics?'" }, "winograd_q_177": { - "description": "" + "description": "Response to Winograd question 177: 'Can the participant reason about agents and their actions in a complex situation?'" }, "winograd_q_178": { - "description": "" + "description": "Response to Winograd question 178: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" }, "winograd_q_179": { - "description": "" + "description": "Response to Winograd question 179: 'Can the participant resolve ambiguity in a social scenario?'" }, "winograd_q_180": { - "description": "" + "description": "Response to Winograd question 180: 'Can the participant infer the correct outcome in a situation involving social dynamics?'" }, "winograd_q_181": { - "description": "" + "description": "Response to Winograd question 181: 'Does the participant demonstrate common-sense reasoning in interpreting a scenario involving multiple agents?'" }, "winograd_q_182": { - "description": "" + "description": "Response to Winograd question 182: 'Can the participant make inferences based on social expectations?'" }, "winograd_q_183": { - "description": "" + "description": "Response to Winograd question 183: 'Can the participant reason through cause and effect in a complex situation?'" }, "winograd_q_184": { - "description": "" + "description": "Response to Winograd question 184: 'Can the participant make logical inferences based on the actions of others?'" }, "winograd_q_185": { - "description": "" + "description": "Response to Winograd question 185: 'Does the participant demonstrate an understanding of cause-and-effect in a social scenario?'" }, "winograd_q_186": { - "description": "" + "description": "Response to Winograd question 186: 'Can the participant make logical inferences about the effects of actions in a social scenario?'" }, "winograd_q_187": { - "description": "" + "description": "Response to Winograd question 187: 'Can the participant reason through ambiguity in a scenario involving multiple agents?'" }, "winograd_q_188": { - "description": "" + "description": "Response to Winograd question 188: 'Can the participant make inferences about interpersonal dynamics in a hypothetical situation?'" }, "winograd_q_189": { - "description": "" + "description": "Response to Winograd question 189: 'Can the participant resolve ambiguity in a scenario involving multiple agents?'" }, "winograd_q_190": { - "description": "" + "description": "Response to Winograd question 190: 'Does the participant demonstrate common-sense reasoning in resolving social ambiguity?'" }, "winograd_q_191": { - "description": "" + "description": "Response to Winograd question 191: 'Can the participant reason through ambiguity in a social scenario?'" }, "winograd_q_192": { - "description": "" + "description": "Response to Winograd question 192: 'Does the participant understand ambiguous relationships between agents in a situation?'" }, "winograd_q_193": { - "description": "" + "description": "Response to Winograd question 193: 'Can the participant reason through cause-and-effect relationships in a social scenario?'" }, "winograd_q_194": { - "description": "" + "description": "Response to Winograd question 194: 'Can the participant resolve ambiguity in a scenario involving multiple agents?'" }, "winograd_q_195": { - "description": "" + "description": "Response to Winograd question 195: 'Does the participant demonstrate common-sense reasoning in interpreting social situations?'" }, "winograd_q_196": { - "description": "" + "description": "Response to Winograd question 196: 'Can the participant reason about the outcomes of hypothetical situations?'" }, "winograd_q_197": { - "description": "" + "description": "Response to Winograd question 197: 'Can the participant make logical inferences about the consequences of actions in a social scenario?'" }, "winograd_q_198": { - "description": "" + "description": "Response to Winograd question 198: 'Can the participant resolve ambiguity in a scenario involving multiple agents?'" }, "winograd_q_199": { - "description": "" + "description": "Response to Winograd question 199: 'Can the participant resolve ambiguity in a situation involving social dynamics?'" }, "winograd_q_200": { - "description": "" + "description": "Response to Winograd question 200: 'Can the participant infer the correct outcome in a scenario involving multiple agents?'" }, "winograd_q_201": { - "description": "" + "description": "Response to Winograd question 201: 'Can the participant resolve ambiguity in a scenario involving multiple agents?'" }, "winograd_q_202": { - "description": "" + "description": "Response to Winograd question 202: 'Can the participant infer logical consequences in a social context?'" }, "winograd_q_203": { - "description": "" + "description": "Response to Winograd question 203: 'Does the participant demonstrate an understanding of social dynamics in a hypothetical situation?'" }, "winograd_q_204": { - "description": "" + "description": "Response to Winograd question 204: 'Can the participant make logical inferences about the intentions of others?'" }, "winograd_q_205": { - "description": "" + "description": "Response to Winograd question 205: 'Can the participant reason through complex social dynamics in a scenario?'" }, "winograd_q_206": { - "description": "" + "description": "Response to Winograd question 206: 'Can the participant interpret the actions of others in a given context?'" }, "winograd_q_207": { - "description": "" + "description": "Response to Winograd question 207: 'Does the participant demonstrate common-sense reasoning in a social scenario?'" }, "winograd_q_208": { - "description": "" + "description": "Response to Winograd question 208: 'Can the participant predict the outcomes of actions in a complex social scenario?'" }, "winograd_q_209": { - "description": "" + "description": "Response to Winograd question 209: 'Can the participant reason about the actions of others based on contextual clues?'" }, "winograd_q_210": { - "description": "" + "description": "Response to Winograd question 210: 'Can the participant predict logical outcomes in a given situation?'" }, "winograd_q_211": { - "description": "" + "description": "Response to Winograd question 211: 'Does the participant show common-sense reasoning in interpreting a scenario?'" }, "winograd_q_212": { - "description": "" + "description": "Response to Winograd question 212: 'Does the participant understand logical relationships in a given social scenario?'" }, "winograd_q_213": { - "description": "" + "description": "Response to Winograd question 213: 'Can the participant make logical inferences about the actions of others in a social scenario?'" + }, + "winograd_q_214": { + "description": "Response to Winograd question 214: 'Can the participant reason through the effects of actions in a hypothetical situation?'" + }, + "winograd_q_215": { + "description": "Response to Winograd question 215: 'Can the participant predict the outcomes of actions in a complex social situation?'" + }, + "winograd_q_216": { + "description": "Response to Winograd question 216: 'Can the participant reason through cause and effect in a social context?'" + }, + "winograd_q_217": { + "description": "Response to Winograd question 217: 'Does the participant show evidence of common sense reasoning about everyday situations?'" + }, + "winograd_q_218": { + "description": "Response to Winograd question 218: 'Does the participant demonstrate common-sense reasoning in interpreting a social situation?'" + }, + "winograd_q_219": { + "description": "Response to Winograd question 219: 'Does the participant demonstrate an understanding of logical relationships in social scenarios?'" + }, + "winograd_q_220": { + "description": "Response to Winograd question 220: 'Can the participant resolve ambiguity in a situation involving social interactions?'" + }, + "winograd_q_221": { + "description": "Response to Winograd question 221: 'Can the participant reason about the effects of actions in a social context?'" + }, + "winograd_q_222": { + "description": "Response to Winograd question 222: 'Can the participant make logical inferences in a complex social situation?'" + }, + "winograd_q_223": { + "description": "Response to Winograd question 223: 'Can the participant reason about the actions of others based on contextual clues?'" + }, + "winograd_q_224": { + "description": "Response to Winograd question 224: 'Can the participant correctly infer actions based on a given context?'" + }, + "winograd_q_225": { + "description": "Response to Winograd question 225: 'Can the participant make logical inferences about the actions of others in a scenario?'" + }, + "winograd_q_226": { + "description": "Response to Winograd question 226: 'Can the participant resolve ambiguity in a scenario involving social interactions?'" + }, + "winograd_q_227": { + "description": "Response to Winograd question 227: 'Can the participant infer the effects of actions in a social situation?'" + }, + "winograd_q_228": { + "description": "Response to Winograd question 228: 'Does the participant demonstrate common-sense reasoning in interpreting a social scenario?'" + }, + "winograd_q_229": { + "description": "Response to Winograd question 229: 'Can the participant resolve ambiguity in a scenario involving social interactions?'" + }, + "winograd_q_230": { + "description": "Response to Winograd question 230: 'Can the participant make logical inferences based on common sense reasoning?'" + }, + "winograd_q_231": { + "description": "Response to Winograd question 231: 'Does the participant demonstrate an understanding of social dynamics in a scenario involving multiple agents?'" + }, + "winograd_q_232": { + "description": "Response to Winograd question 232: 'Does the participant demonstrate common-sense reasoning in resolving ambiguity in a social situation?'" + }, + "winograd_q_233": { + "description": "Response to Winograd question 233: 'Can the participant reason about the intentions of others based on the given context?'" + }, + "winograd_q_234": { + "description": "Response to Winograd question 234: 'Does the participant demonstrate common-sense reasoning in resolving ambiguous social situations?'" + }, + "winograd_q_235": { + "description": "Response to Winograd question 235: 'Does the participant understand cause and effect relationships in the given scenario?'" + }, + "winograd_q_236": { + "description": "Response to Winograd question 236: 'Can the participant understand the effects of an action based on context?'" + }, + "winograd_q_237": { + "description": "Response to Winograd question 237: 'Can the participant interpret the actions of others based on the given context?'" + }, + "winograd_q_238": { + "description": "Response to Winograd question 238: 'Can the participant predict outcomes in social situations?'" + }, + "winograd_q_239": { + "description": "Response to Winograd question 239: 'Can the participant reason about the consequences of actions in a social scenario?'" + }, + "winograd_q_240": { + "description": "Response to Winograd question 240: 'Does the participant demonstrate an understanding of cause and effect in social interactions?'" + }, + "winograd_q_241": { + "description": "Response to Winograd question 241: 'Can the participant resolve ambiguity in a scenario involving multiple agents?'" + }, + "winograd_q_242": { + "description": "Response to Winograd question 242: 'Can the participant reason about the actions of others based on contextual clues?'" + }, + "winograd_q_243": { + "description": "Response to Winograd question 243: 'Does the participant reason about the effects of actions in ambiguous situations?'" + }, + "winograd_q_244": { + "description": "Response to Winograd question 244: 'Does the participant understand the social dynamics in a scenario involving ambiguity?'" + }, + "winograd_q_245": { + "description": "Response to Winograd question 245: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" + }, + "winograd_q_246": { + "description": "Response to Winograd question 246: 'Can the participant infer the correct outcome in a scenario involving social dynamics?'" + }, + "winograd_q_247": { + "description": "Response to Winograd question 247: 'Can the participant resolve ambiguity in a scenario involving social dynamics?'" + }, + "winograd_q_248": { + "description": "Response to Winograd question 248: 'Can the participant resolve ambiguity in a situation involving social interactions?'" + }, + "winograd_q_249": { + "description": "Response to Winograd question 249: 'Can the participant resolve ambiguity in a scenario involving social interactions?'" + }, + "winograd_q_250": { + "description": "Response to Winograd question 250: 'Does the participant make logical inferences about the actions of others?'" + }, + "winograd_q_251": { + "description": "Response to Winograd question 251: 'Does the participant demonstrate common sense reasoning in social contexts?'" + }, + "winograd_q_252": { + "description": "Response to Winograd question 252: 'Can the participant grasp consequences of a hypothetical action?'" + }, + "winograd_q_253": { + "description": "Response to Winograd question 253: 'Does the participant understand the effects of an action in a complex scenario?'" + }, + "winograd_q_254": { + "description": "Response to Winograd question 254: 'Can the participant reason through ambiguity in a scenario involving social interactions?'" + }, + "winograd_q_255": { + "description": "Response to Winograd question 255: 'Does the participant demonstrate an understanding of social expectations in various contexts?'" + }, + "winograd_q_256": { + "description": "Response to Winograd question 256: 'Does the participant understand the effects of actions in a hypothetical scenario?'" + }, + "winograd_q_257": { + "description": "Response to Winograd question 257: 'Does the participant understand complex cause-and-effect relationships?'" + }, + "winograd_q_258": { + "description": "Response to Winograd question 258: 'Can the participant reason about the intentions of others based on context?'" + }, + "winograd_q_259": { + "description": "Response to Winograd question 259: 'Can the participant understand cause and effect in everyday situations?'" + }, + "winograd_q_260": { + "description": "Response to Winograd question 260: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" + }, + "winograd_q_261": { + "description": "Response to Winograd question 261: 'Can the participant make logical inferences about the actions of others in a social scenario?'" + }, + "winograd_q_262": { + "description": "Response to Winograd question 262: 'Can the participant infer social expectations from actions?'" + }, + "winograd_q_263": { + "description": "Response to Winograd question 263: 'Does the participant understand social norms and expectations in the given scenario?'" + }, + "winograd_q_264": { + "description": "Response to Winograd question 264: 'Can the participant reason about the actions of others based on contextual clues?'" + }, + "winograd_q_265": { + "description": "Response to Winograd question 265: 'Can the participant understand cause and effect relationships in social settings?'" + }, + "winograd_q_266": { + "description": "Response to Winograd question 266: 'Does the participant demonstrate common-sense reasoning in a social situation?'" + }, + "winograd_q_267": { + "description": "Response to Winograd question 267: 'Does the participant demonstrate an understanding of cause-and-effect in social interactions?'" + }, + "winograd_q_268": { + "description": "Response to Winograd question 268: 'Can the participant reason about the consequences of actions in a social scenario?'" + }, + "winograd_q_269": { + "description": "Response to Winograd question 269: 'Can the participant resolve ambiguity in a scenario involving social dynamics?'" + }, + "winograd_q_270": { + "description": "Response to Winograd question 270: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" + }, + "winograd_q_271": { + "description": "Response to Winograd question 271: 'Can the participant demonstrate logical reasoning about everyday events?'" + }, + "winograd_q_272": { + "description": "Response to Winograd question 272: 'Can the participant infer the correct outcome in a scenario involving social dynamics?'" + }, + "winograd_q_273": { + "description": "Response to Winograd question 273: 'Can the participant infer the correct outcome in a scenario involving social interactions?'" + }, + "winograd_q_274": { + "description": "Response to Winograd question 274: 'Does the participant reason logically in a given social situation?'" + }, + "winograd_q_275": { + "description": "Response to Winograd question 275: 'Does the participant interpret the consequences of a hypothetical action?'" + }, + "winograd_q_276": { + "description": "Response to Winograd question 276: 'Can the participant reason through social interactions in a scenario involving multiple agents?'" } } diff --git a/src/b2aiprep/prepare/utils.py b/src/b2aiprep/prepare/utils.py index 9e68de1..afe8eaf 100644 --- a/src/b2aiprep/prepare/utils.py +++ b/src/b2aiprep/prepare/utils.py @@ -292,3 +292,51 @@ def sort_json_by_another_and_save( json.dump(sorted_json, output_file, indent=4) print(f"Sorted JSON saved to {output_file_path}") + + +def save_json(data: Dict[str, any], file_path: str) -> None: + """Helper function to save a dictionary as a JSON file with correct character rendering.""" + with open(file_path, "w", encoding="utf-8") as f: + json.dump(data, f, indent=4, ensure_ascii=False) + + +def update_jsons_in_directory(directory: str, reference_file: str) -> None: + """Function to load all JSON files in a directory, replace their values + with values from a reference JSON file based on matching keys, and remove + those entries from the reference JSON at the end, excluding .json.""" + + # Load reference JSON + reference_json = open_json_as_dict(reference_file) + + # Track the keys that have been updated + updated_keys: List[str] = [] + + # Iterate over all files in the directory + for file_name in os.listdir(directory): + # Exclude .json + if file_name.endswith(".json") and file_name != ".json": + file_path = os.path.join(directory, file_name) + + # Load the current JSON file as a dict + json_data = open_json_as_dict(file_path) + + # Replace values in the json_data with the ones from reference_json for matching keys + updated_json = {} + for key in json_data.keys(): + if key in reference_json: + updated_json[key] = reference_json[key] # Use the value from reference JSON + updated_keys.append(key) # Track the key to be removed later + else: + raise KeyError(f"Key '{key}' in {file_name} not found in reference JSON.") + + # Save the updated JSON file + save_json(updated_json, file_path) + print(f"Updated: {file_name}") + + # Remove all updated keys from the reference JSON + for key in updated_keys: + reference_json.pop(key, None) + + # Save the modified reference JSON back to its original file + save_json(reference_json, reference_file) + print(f"Updated reference JSON saved back to {reference_file}")