diff --git a/examples/output/CentralMPAs/substrate.json b/examples/output/CentralMPAs/substrate.json deleted file mode 100644 index 44f77d4..0000000 --- a/examples/output/CentralMPAs/substrate.json +++ /dev/null @@ -1,12721 +0,0 @@ -{ - "metrics": [ - { - "geographyId": "central_br", - "metricId": "substrate", - "classId": "1", - "sketchId": "35260", - "groupId": "band-0", - "value": 1045045, - "extra": { - "sketchName": "CentralMPAs", - "isCollection": true - } - }, - { - "geographyId": "central_br", - "metricId": "substrate", - "classId": "1", - "sketchId": "35261", - "groupId": "band-0", - "value": 4393, - "extra": { - "sketchName": "Natural Bridges SMR - existing (46, 69)" - } - }, - { - "geographyId": "central_br", - "metricId": "substrate", - "classId": "1", - "sketchId": "35262", - "groupId": "band-0", - "value": 11083, - "extra": { - "sketchName": "Carmel Pinnacles SMR - existing, no change (52, 79)" - } - }, - { - "geographyId": "central_br", - "metricId": "substrate", - "classId": "1", - 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"type": "FeatureCollection", - "features": [ - { - "id": 29483, - "bbox": [ - -121.962715, - 36.209553, - -121.7673, - 36.305416 - ], - "type": "Feature", - "properties": { - "4768": "mpa-test", - "4769": "SMCANT", - "8340": "SMR", - "id": "29483", - "ccr": null, - "fid": null, - "name": "mpa-test", - "type": "SMCANT", - "AddMPA": null, - "Method": null, - "Tribal": null, - "postId": null, - "userId": "531", - "DFG_URL": null, - "contact": null, - "OBJECTID": null, - "Petition": null, - "userSlug": "Abby", - "Bioregion": null, - "createdAt": "2024-05-28T20:04:12.993219+00:00", - "updatedAt": "2024-06-03T18:29:40.726829+00:00", - "AffectedMP": null, - "Change_Cat": null, - "Descriptio": null, - "Organizati": null, - "PetitionLi": null, - "Study_Regi": null, - "TakeChange": null, - "collectionId": "29482", - "isCollection": false, - "sharedInForum": false, - "sketchClassId": "492", - "userAttributes": [ - { - "label": "Description", - "value": null, - "exportId": "Descriptio", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 4770, - "alternateLanguages": {} - }, - { - "label": "CCR", - "value": null, - "exportId": "ccr", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8317, - "alternateLanguages": {} - }, - { - "label": "Study Region", - "value": null, - "exportId": "Study_Regi", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8318, - "alternateLanguages": {} - }, - { - "label": "Current Designation (type)", - "value": "SMCANT", - "exportId": "type", - "fieldType": "ComboBox", - "valueLabel": "State Marine Conervation Area (No-Take)", - "formElementId": 4769, - "alternateLanguages": {} - }, - { - "label": "DFG URL", - "value": null, - "exportId": "DFG_URL", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8319, - "alternateLanguages": {} - }, - { - "label": "Add or Remove MPA", - "value": null, - "exportId": "AddMPA", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8320, - "alternateLanguages": {} - }, - { - "label": "Affected MPA", - "value": null, - "exportId": "AffectedMP", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8321, - "alternateLanguages": {} - }, - { - "label": "Bioregion", - "value": null, - "exportId": "Bioregion", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8322, - "alternateLanguages": {} - }, - { - "label": "Change Category", - "value": null, - "exportId": "Change_Cat", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8323, - "alternateLanguages": {} - }, - { - "label": "Method", - "value": null, - "exportId": "Method", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 8324, - "alternateLanguages": {} - }, - { - "label": "Orginization", - "value": null, - "exportId": "Organizati", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8325, - "alternateLanguages": {} - }, - { - "label": "Take Change", - "value": null, - "exportId": "TakeChange", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 8326, - "alternateLanguages": {} - }, - { - "label": "Tribal?", - "value": null, - "exportId": "Tribal", - "fieldType": "YesNo", - "valueLabel": null, - "formElementId": 8328, - "alternateLanguages": {} - }, - { - "label": "Petition", - "value": null, - "exportId": "Petition", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8329, - "alternateLanguages": {} - }, - { - "label": "Petition Link (URL)", - "value": null, - "exportId": "PetitionLi", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8331, - "alternateLanguages": {} - }, - { - "label": "FID", - "value": null, - "exportId": "fid", - "fieldType": "Number", - "valueLabel": null, - "formElementId": 8337, - "alternateLanguages": {} - }, - { - "label": "Contact", - "value": null, - "exportId": "contact", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8338, - "alternateLanguages": {} - }, - { - "label": "Proposed Designation (type)", - "value": "SMR", - "exportId": "proposed_designation", - "fieldType": "ComboBox", - "valueLabel": "State Marine Reserve", - "formElementId": 8340, - "alternateLanguages": {} - }, - { - "label": "Object ID", - "value": null, - "exportId": "OBJECTID", - "fieldType": "Number", - "valueLabel": null, - "formElementId": 8341, - "alternateLanguages": {} - } - ], - "proposed_designation": "SMR" - }, - "geometry": null - }, - { - "id": 29484, - "bbox": [ - -120.58906, - 34.3916, - -120.31646, - 34.53999 - ], - "type": "Feature", - "properties": { - "4768": "split", - "4769": "SMCANT", - "8340": "Special", - "id": "29484", - "ccr": null, - "fid": null, - "name": "split", - "type": "SMCANT", - "AddMPA": null, - "Method": null, - "Tribal": null, - "postId": null, - "userId": "531", - "DFG_URL": null, - "contact": null, - "OBJECTID": null, - "Petition": null, - "userSlug": "Abby", - "Bioregion": null, - "createdAt": "2024-05-28T20:04:49.549506+00:00", - "updatedAt": "2024-06-03T18:29:57.768727+00:00", - "AffectedMP": null, - "Change_Cat": null, - "Descriptio": null, - "Organizati": null, - "PetitionLi": null, - "Study_Regi": null, - "TakeChange": null, - "collectionId": "29482", - "isCollection": false, - "sharedInForum": false, - "sketchClassId": "492", - "userAttributes": [ - { - "label": "Description", - "value": null, - "exportId": "Descriptio", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 4770, - "alternateLanguages": {} - }, - { - "label": "CCR", - "value": null, - "exportId": "ccr", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8317, - "alternateLanguages": {} - }, - { - "label": "Study Region", - "value": null, - "exportId": "Study_Regi", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8318, - "alternateLanguages": {} - }, - { - "label": "Current Designation (type)", - "value": "SMCANT", - "exportId": "type", - "fieldType": "ComboBox", - "valueLabel": "Federal Marine Conservation Area", - "formElementId": 4769, - "alternateLanguages": {} - }, - { - "label": "DFG URL", - "value": null, - "exportId": "DFG_URL", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8319, - "alternateLanguages": {} - }, - { - "label": "Add or Remove MPA", - "value": null, - "exportId": "AddMPA", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8320, - "alternateLanguages": {} - }, - { - "label": "Affected MPA", - "value": null, - "exportId": "AffectedMP", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8321, - "alternateLanguages": {} - }, - { - "label": "Bioregion", - "value": null, - "exportId": "Bioregion", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8322, - "alternateLanguages": {} - }, - { - "label": "Change Category", - "value": null, - "exportId": "Change_Cat", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8323, - "alternateLanguages": {} - }, - { - "label": "Method", - "value": null, - "exportId": "Method", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 8324, - "alternateLanguages": {} - }, - { - "label": "Orginization", - "value": null, - "exportId": "Organizati", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8325, - "alternateLanguages": {} - }, - { - "label": "Take Change", - "value": null, - "exportId": "TakeChange", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 8326, - "alternateLanguages": {} - }, - { - "label": "Tribal?", - "value": null, - "exportId": "Tribal", - "fieldType": "YesNo", - "valueLabel": null, - "formElementId": 8328, - "alternateLanguages": {} - }, - { - "label": "Petition", - "value": null, - "exportId": "Petition", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8329, - "alternateLanguages": {} - }, - { - "label": "Petition Link (URL)", - "value": null, - "exportId": "PetitionLi", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8331, - "alternateLanguages": {} - }, - { - "label": "FID", - "value": null, - "exportId": "fid", - "fieldType": "Number", - "valueLabel": null, - "formElementId": 8337, - "alternateLanguages": {} - }, - { - "label": "Contact", - "value": null, - "exportId": "contact", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8338, - "alternateLanguages": {} - }, - { - "label": "Proposed Designation (type)", - "value": "Special", - "exportId": "proposed_designation", - "fieldType": "ComboBox", - "valueLabel": "Special Closure", - "formElementId": 8340, - "alternateLanguages": {} - }, - { - "label": "Object ID", - "value": null, - "exportId": "OBJECTID", - "fieldType": "Number", - "valueLabel": null, - "formElementId": 8341, - "alternateLanguages": {} - } - ], - "proposed_designation": "Special" - }, - "geometry": null - }, - { - "id": 29481, - "bbox": [ - -119.488525, - 33.952343, - -119.29513, - 34.068176 - ], - "type": "Feature", - "properties": { - "4768": "anacapa", - "4769": "SMCANT", - "8337": 2, - "8340": "SMCANT", - "id": "29481", - "ccr": null, - "fid": 2, - "name": "anacapa", - "type": "SMCANT", - "AddMPA": null, - "Method": null, - "Tribal": null, - "postId": null, - "userId": "531", - "DFG_URL": null, - "contact": null, - "OBJECTID": null, - "Petition": null, - "userSlug": "Abby", - "Bioregion": null, - "createdAt": "2024-05-28T20:03:43.811482+00:00", - "updatedAt": "2024-06-03T18:29:22.893998+00:00", - "AffectedMP": null, - "Change_Cat": null, - "Descriptio": null, - "Organizati": null, - "PetitionLi": null, - "Study_Regi": null, - "TakeChange": null, - "collectionId": "29482", - "isCollection": false, - "sharedInForum": false, - "sketchClassId": "492", - "userAttributes": [ - { - "label": "Description", - "value": null, - "exportId": "Descriptio", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 4770, - "alternateLanguages": {} - }, - { - "label": "CCR", - "value": null, - "exportId": "ccr", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8317, - "alternateLanguages": {} - }, - { - "label": "Study Region", - "value": null, - "exportId": "Study_Regi", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8318, - "alternateLanguages": {} - }, - { - "label": "Current Designation (type)", - "value": "SMCANT", - "exportId": "type", - "fieldType": "ComboBox", - "valueLabel": "Federal Marine Conservation Area", - "formElementId": 4769, - "alternateLanguages": {} - }, - { - "label": "DFG URL", - "value": null, - "exportId": "DFG_URL", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8319, - "alternateLanguages": {} - }, - { - "label": "Add or Remove MPA", - "value": null, - "exportId": "AddMPA", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8320, - "alternateLanguages": {} - }, - { - "label": "Affected MPA", - "value": null, - "exportId": "AffectedMP", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8321, - "alternateLanguages": {} - }, - { - "label": "Bioregion", - "value": null, - "exportId": "Bioregion", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8322, - "alternateLanguages": {} - }, - { - "label": "Change Category", - "value": null, - "exportId": "Change_Cat", - "fieldType": "ComboBox", - "valueLabel": null, - "formElementId": 8323, - "alternateLanguages": {} - }, - { - "label": "Method", - "value": null, - "exportId": "Method", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 8324, - "alternateLanguages": {} - }, - { - "label": "Orginization", - "value": null, - "exportId": "Organizati", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8325, - "alternateLanguages": {} - }, - { - "label": "Take Change", - "value": null, - "exportId": "TakeChange", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 8326, - "alternateLanguages": {} - }, - { - "label": "Tribal?", - "value": null, - "exportId": "Tribal", - "fieldType": "YesNo", - "valueLabel": null, - "formElementId": 8328, - "alternateLanguages": {} - }, - { - "label": "Petition", - "value": null, - "exportId": "Petition", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8329, - "alternateLanguages": {} - }, - { - "label": "Petition Link (URL)", - "value": null, - "exportId": "PetitionLi", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8331, - "alternateLanguages": {} - }, - { - "label": "FID", - "value": 2, - "exportId": "fid", - "fieldType": "Number", - "valueLabel": null, - "formElementId": 8337, - "alternateLanguages": {} - }, - { - "label": "Contact", - "value": null, - "exportId": "contact", - "fieldType": "ShortText", - "valueLabel": null, - "formElementId": 8338, - "alternateLanguages": {} - }, - { - "label": "Proposed Designation (type)", - "value": "SMCANT", - "exportId": "proposed_designation", - "fieldType": "ComboBox", - "valueLabel": "Federal Marine Conservation Area", - "formElementId": 8340, - "alternateLanguages": {} - }, - { - "label": "Object ID", - "value": null, - "exportId": "OBJECTID", - "fieldType": "Number", - "valueLabel": null, - "formElementId": 8341, - "alternateLanguages": {} - } - ], - "proposed_designation": "SMCANT" - }, - "geometry": null - } - ], - "properties": { - "4771": "network", - "id": "29482", - "name": "network", - "postId": null, - "userId": "531", - "userSlug": "Abby", - "createdAt": "2024-05-28T20:04:07.4329+00:00", - "updatedAt": "2024-06-03T18:29:57.768727+00:00", - "description": null, - "collectionId": null, - "isCollection": true, - "sharedInForum": false, - "sketchClassId": "493", - "userAttributes": [ - { - "label": "Description", - "value": null, - "exportId": "description", - "fieldType": "TextArea", - "valueLabel": null, - "formElementId": 8330, - "alternateLanguages": {} - } - ] - } - } -} \ No newline at end of file diff --git a/project/datasources.json b/project/datasources.json index fab4334..bc7d2e0 100644 --- a/project/datasources.json +++ b/project/datasources.json @@ -379,18 +379,6 @@ "lastUpdated": "2024-06-28T18:37:50.902Z", "src": "data/src/California MPAs 2024/Data_Received/NOAA_NCEI/CAbathyClipped.tif" }, - { - "datasourceId": "substrate", - "geo_type": "raster", - "formats": ["tif"], - "precalc": true, - "measurementType": "categorical", - "band": 1, - "noDataValue": -9999, - "created": "2024-07-22T18:55:43.392Z", - "lastUpdated": "2024-08-13T18:08:51.607Z", - "src": "data/src/California MPAs 2024/Data_Received/CDFW/unzipped/substrate/substrate_clipped.tif" - }, { "datasourceId": "kelpPersist", "geo_type": "raster", diff --git a/project/geoprocessing.json b/project/geoprocessing.json index 0fbae65..3ca1b1f 100644 --- a/project/geoprocessing.json +++ b/project/geoprocessing.json @@ -34,8 +34,6 @@ "src/functions/shoretypesWorker.ts", "src/functions/estuaries.ts", "src/functions/estuariesWorker.ts", - "src/functions/substrate.ts", - "src/functions/substrateWorker.ts", "src/functions/habitat.ts", "src/functions/habitatWorker.ts", "src/functions/eelgrass.ts", diff --git a/project/metrics.json b/project/metrics.json index 8e23853..3db78f5 100644 --- a/project/metrics.json +++ b/project/metrics.json @@ -163,26 +163,6 @@ } ] }, - { - "metricId": "substrate", - "type": "areaOverlap", - "datasourceId": "substrate", - "classes": [ - { - "classId": "1", - "classKey": "1", - "display": "Hard Substrate", - "datasourceId": "", - "layerId": "1FA9RLpao" - }, - { - "classId": "2", - "classKey": "2", - "display": "Soft Substrate", - "layerId": "1FA9RLpao" - } - ] - }, { "metricId": "eelgrass", "type": "areaOverlap", diff --git a/project/precalc.json b/project/precalc.json index cb1e5ba..a007865 100644 --- a/project/precalc.json +++ b/project/precalc.json @@ -543,22 +543,6 @@ "groupId": "band-0", "value": 1850384 }, - { - "geographyId": "central_br", - "metricId": "valid", - "classId": "substrate-1", - "sketchId": null, - "groupId": "band-0", - "value": 4001318 - }, - { - "geographyId": "central_br", - "metricId": "valid", - "classId": "substrate-2", - "sketchId": null, - "groupId": "band-0", - "value": 29868495 - }, { "geographyId": "central_sr", "metricId": "area", @@ -1103,22 +1087,6 @@ "groupId": "band-0", "value": 1683508 }, - { - "geographyId": "central_sr", - "metricId": "valid", - "classId": "substrate-1", - "sketchId": null, - "groupId": "band-0", - "value": 3432966 - }, - { - "geographyId": "central_sr", - "metricId": "valid", - "classId": "substrate-2", - "sketchId": null, - "groupId": "band-0", - "value": 26062915 - }, { "geographyId": "north_br", "metricId": "area", @@ -1663,22 +1631,6 @@ "groupId": "band-0", "value": 2602701 }, - { - "geographyId": "north_br", - "metricId": "valid", - "classId": "substrate-1", - "sketchId": null, - "groupId": "band-0", - "value": 4549060 - }, - { - "geographyId": "north_br", - "metricId": "valid", - "classId": "substrate-2", - "sketchId": null, - "groupId": "band-0", - "value": 35987400 - }, { "geographyId": "north_sr", "metricId": "area", @@ -2223,22 +2175,6 @@ "groupId": "band-0", "value": 1461810 }, - { - "geographyId": "north_sr", - "metricId": "valid", - "classId": "substrate-1", - "sketchId": null, - "groupId": "band-0", - "value": 2538392 - }, - { - "geographyId": "north_sr", - "metricId": "valid", - "classId": "substrate-2", - "sketchId": null, - "groupId": "band-0", - "value": 22806226 - }, { "geographyId": "northcentral_sr", "metricId": "area", @@ -2783,22 +2719,6 @@ "groupId": "band-0", "value": 1307800 }, - { - "geographyId": "northcentral_sr", - "metricId": "valid", - "classId": "substrate-1", - "sketchId": null, - "groupId": "band-0", - "value": 2579020 - }, - { - "geographyId": "northcentral_sr", - "metricId": "valid", - "classId": "substrate-2", - "sketchId": null, - "groupId": "band-0", - "value": 16986712 - }, { "geographyId": "south_br", "metricId": "area", @@ -3343,22 +3263,6 @@ "groupId": "band-0", "value": 2325491 }, - { - "geographyId": "south_br", - "metricId": "valid", - "classId": "substrate-1", - "sketchId": null, - "groupId": "band-0", - "value": 3849749 - }, - { - "geographyId": "south_br", - "metricId": "valid", - "classId": "substrate-2", - "sketchId": null, - "groupId": "band-0", - "value": 45261701 - }, { "geographyId": "south_sr", "metricId": "area", @@ -3903,22 +3807,6 @@ "groupId": "band-0", "value": 2325486 }, - { - "geographyId": "south_sr", - "metricId": "valid", - "classId": "substrate-1", - "sketchId": null, - "groupId": "band-0", - "value": 3849749 - }, - { - "geographyId": "south_sr", - "metricId": "valid", - "classId": "substrate-2", - "sketchId": null, - "groupId": "band-0", - "value": 45261701 - }, { "geographyId": "world", "metricId": "area", @@ -4462,21 +4350,5 @@ "sketchId": null, "groupId": "band-0", "value": 6778576 - }, - { - "geographyId": "world", - "metricId": "valid", - "classId": "substrate-1", - "sketchId": null, - "groupId": "band-0", - "value": 12400127 - }, - { - "geographyId": "world", - "metricId": "valid", - "classId": "substrate-2", - "sketchId": null, - "groupId": "19045282", - "value": 111117596 } ] diff --git a/src/components/Substrate.example-stories.ts b/src/components/Substrate.example-stories.ts deleted file mode 100644 index 8907b30..0000000 --- a/src/components/Substrate.example-stories.ts +++ /dev/null @@ -1,9 +0,0 @@ -import { defineGpStories } from "@seasketch/geoprocessing/storybook"; - -// Register to generate stories for each example sketch and its gp function smoke test output -export const storyConfig = defineGpStories({ - componentName: "Substrate", - /** Relative path to React component from this config file */ - componentPath: "./Substrate.tsx", - title: "Project/Components/Substrate", -}); diff --git a/src/components/Substrate.tsx b/src/components/Substrate.tsx deleted file mode 100644 index 89e4377..0000000 --- a/src/components/Substrate.tsx +++ /dev/null @@ -1,309 +0,0 @@ -import React from "react"; -import { Trans, useTranslation } from "react-i18next"; -import { - ClassTable, - Collapse, - ReportError, - ResultsCard, - useSketchProperties, -} from "@seasketch/geoprocessing/client-ui"; -import { - GeogProp, - Metric, - ReportResult, - metricsWithSketchId, - roundDecimal, - squareMeterToMile, - toPercentMetric, -} from "@seasketch/geoprocessing/client-core"; -import project from "../../project/projectClient.js"; -import { GeographyTable } from "../util/GeographyTable.js"; -import { genSketchTable } from "../util/genSketchTable.js"; -const Number = new Intl.NumberFormat("en", { style: "decimal" }); - -/** - * Substrate component - * - * @param props - geographyId - * @returns A react component which displays an overlap report - */ -export const Substrate: React.FunctionComponent = () => { - const { t } = useTranslation(); - const [{ isCollection }] = useSketchProperties(); - const geographies = project.geographies; - - // Metrics - const metricGroup = project.getMetricGroup("substrate", t); - - // Labels - const titleLabel = t("Substrate"); - const mapLabel = t("Map"); - const withinLabel = t("Within Plan"); - const percWithinLabel = t("% Within Plan"); - const unitsLabel = t("mi²"); - - return ( - - {(data: ReportResult) => { - const percMetricIdName = `${metricGroup.metricId}Perc`; - - let valueMetrics: Metric[] = []; - let precalcMetrics: Metric[] = []; - let percMetrics: Metric[] = []; - - geographies.forEach((g) => { - const vMetrics = metricsWithSketchId( - data.metrics.filter( - (m) => - m.metricId === metricGroup.metricId && - m.geographyId === g.geographyId, - ), - [data.sketch.properties.id], - ); - valueMetrics = valueMetrics.concat(vMetrics); - - const preMetrics = project.getPrecalcMetrics( - metricGroup, - "valid", - g.geographyId, - ); - precalcMetrics = precalcMetrics.concat(preMetrics); - - percMetrics = percMetrics.concat( - toPercentMetric(vMetrics, preMetrics, { - metricIdOverride: percMetricIdName, - }), - ); - }); - - const metrics = [...valueMetrics, ...percMetrics]; - - const objectives = (() => { - const objectives = project.getMetricGroupObjectives(metricGroup, t); - if (!objectives.length) return undefined; - else return objectives; - })(); - - return ( - -

- - This report summarizes this plan's overlap with substrate within - California's territorial sea. - -

- - m.geographyId === "world")} - metricGroup={metricGroup} - objective={objectives} - columnConfig={[ - { - columnLabel: " ", - type: "class", - width: 30, - }, - { - columnLabel: withinLabel, - type: "metricValue", - metricId: metricGroup.metricId, - valueFormatter: (val: string | number) => - Number.format( - roundDecimal( - squareMeterToMile( - typeof val === "string" - ? parseInt(val) * - 9.709749513740293381 * - 9.709749513740293381 - : val * 9.709749513740293381 * 9.709749513740293381, - ), - 2, - { keepSmallValues: true }, - ), - ), - valueLabel: unitsLabel, - chartOptions: { - showTitle: true, - }, - width: 20, - }, - { - columnLabel: percWithinLabel, - type: "metricChart", - metricId: percMetricIdName, - valueFormatter: "percent", - chartOptions: { - showTitle: true, - }, - width: 40, - }, - { - columnLabel: mapLabel, - type: "layerToggle", - width: 9.709749513740293381, - }, - ]} - /> - - - {metricGroup.classes.map((curClass) => ( - - m.geographyId?.endsWith("_sr") && - m.classId === curClass.classId, - )} - metricGroup={metricGroup} - geographies={geographies.filter((g) => - g.geographyId.endsWith("_sr"), - )} - objective={objectives} - columnConfig={[ - { - columnLabel: t(curClass.display), - type: "class", - width: 30, - }, - { - columnLabel: withinLabel, - type: "metricValue", - metricId: metricGroup.metricId, - valueFormatter: (val: string | number) => - Number.format( - roundDecimal( - squareMeterToMile( - typeof val === "string" - ? parseInt(val) * - 9.709749513740293381 * - 9.709749513740293381 - : val * - 9.709749513740293381 * - 9.709749513740293381, - ), - 2, - { keepSmallValues: true }, - ), - ), - valueLabel: unitsLabel, - chartOptions: { - showTitle: true, - }, - width: 20, - }, - { - columnLabel: percWithinLabel, - type: "metricChart", - metricId: percMetricIdName, - valueFormatter: "percent", - chartOptions: { - showTitle: true, - }, - width: 40, - }, - ]} - /> - ))} - - - - {metricGroup.classes.map((curClass) => ( - - m.geographyId?.endsWith("_br") && - m.classId === curClass.classId, - )} - metricGroup={metricGroup} - geographies={geographies.filter((g) => - g.geographyId.endsWith("_br"), - )} - objective={objectives} - columnConfig={[ - { - columnLabel: t(curClass.display), - type: "class", - width: 30, - }, - { - columnLabel: withinLabel, - type: "metricValue", - metricId: metricGroup.metricId, - valueFormatter: (val: string | number) => - Number.format( - roundDecimal( - squareMeterToMile( - typeof val === "string" - ? parseInt(val) * - 9.709749513740293381 * - 9.709749513740293381 - : val * - 9.709749513740293381 * - 9.709749513740293381, - ), - 2, - { keepSmallValues: true }, - ), - ), - valueLabel: unitsLabel, - chartOptions: { - showTitle: true, - }, - width: 20, - }, - { - columnLabel: percWithinLabel, - type: "metricChart", - metricId: percMetricIdName, - valueFormatter: "percent", - chartOptions: { - showTitle: true, - }, - width: 40, - }, - ]} - /> - ))} - - - {isCollection && ( - - {genSketchTable( - { - ...data, - metrics: data.metrics.filter( - (m) => m.geographyId === "world", - ), - }, - precalcMetrics.filter((m) => m.geographyId === "world"), - metricGroup, - t, - { - valueFormatter: (val) => - val * 9.709749513740293381 * 9.709749513740293381, - replicate: true, - }, - )} - - )} - - - -

🗺️ Source Data: CDFW

-

- 📈 Report: This report calculates the total area of each - habitat class within the selected MPA(s). This value is - divided by the total area of each habitat class to obtain the - % contained within the selected MPA(s). If the selected area - includes multiple areas that overlap, the overlap is only - counted once. -

- - - - ); - }} - - ); -}; diff --git a/src/functions/substrate.ts b/src/functions/substrate.ts deleted file mode 100644 index bbcef56..0000000 --- a/src/functions/substrate.ts +++ /dev/null @@ -1,93 +0,0 @@ -import { - Sketch, - SketchCollection, - Polygon, - MultiPolygon, - GeoprocessingHandler, - DefaultExtraParams, - runLambdaWorker, - parseLambdaResponse, -} from "@seasketch/geoprocessing"; -import project from "../../project/projectClient.js"; -import { - GeoprocessingRequestModel, - Metric, - ReportResult, - isMetricArray, - rekeyMetrics, - sortMetrics, - toNullSketch, -} from "@seasketch/geoprocessing/client-core"; -import { substrateWorker } from "./substrateWorker.js"; -import { genWorldMetrics } from "../util/genWorldMetrics.js"; - -/** - * substrate: A geoprocessing function that calculates overlap metrics - * @param sketch - A sketch or collection of sketches - * @param extraParams - * @returns Calculated metrics and a null sketch - */ -export async function substrate( - sketch: - | Sketch - | SketchCollection, - extraParams: DefaultExtraParams = {}, - request?: GeoprocessingRequestModel, -): Promise { - const metricGroup = project.getMetricGroup("substrate"); - const geographies = project.geographies.filter( - (g) => g.geographyId !== "world", - ); - - const metrics = ( - await Promise.all( - geographies.map(async (geography) => { - const parameters = { - ...extraParams, - geography: geography, - metricGroup, - }; - - return process.env.NODE_ENV === "test" - ? substrateWorker(sketch, parameters) - : runLambdaWorker( - sketch, - project.package.name, - "substrateWorker", - project.geoprocessing.region, - parameters, - request!, - ); - }), - ) - ).reduce( - (metrics, result) => - metrics.concat( - isMetricArray(result) - ? result - : (parseLambdaResponse(result) as Metric[]), - ), - [], - ); - - return { - metrics: sortMetrics( - rekeyMetrics([ - ...metrics, - ...genWorldMetrics(sketch, metrics, metricGroup), - ]), - ), - sketch: toNullSketch(sketch, true), - }; -} - -export default new GeoprocessingHandler(substrate, { - title: "substrate", - description: "substrate overlap", - timeout: 500, // seconds - memory: 1024, // megabytes - executionMode: "async", - // Specify any Sketch Class form attributes that are required - requiresProperties: [], - workers: ["substrateWorker"], -}); diff --git a/src/functions/substrateSmoke.test.ts b/src/functions/substrateSmoke.test.ts deleted file mode 100644 index b3e0020..0000000 --- a/src/functions/substrateSmoke.test.ts +++ /dev/null @@ -1,24 +0,0 @@ -/** - * @jest-environment node - * @group smoke - */ -import { - getExamplePolygonSketchAll, - writeResultOutput, -} from "@seasketch/geoprocessing/scripts/testing"; -import { describe, test, expect } from "vitest"; -import { substrate } from "./substrate.js"; - -describe("Basic smoke tests", () => { - test("handler function is present", () => { - expect(typeof substrate).toBe("function"); - }); - test("substrate - tests run against all examples", async () => { - const examples = await getExamplePolygonSketchAll(); - for (const example of examples) { - const result = await substrate(example); - expect(result).toBeTruthy(); - writeResultOutput(result, "substrate", example.properties.name); - } - }, 180000); -}); diff --git a/src/functions/substrateWorker.ts b/src/functions/substrateWorker.ts deleted file mode 100644 index 770ddb0..0000000 --- a/src/functions/substrateWorker.ts +++ /dev/null @@ -1,87 +0,0 @@ -import { - Sketch, - SketchCollection, - Polygon, - MultiPolygon, - GeoprocessingHandler, - splitSketchAntimeridian, - rasterMetrics, -} from "@seasketch/geoprocessing"; -import project from "../../project/projectClient.js"; -import { - Geography, - Metric, - MetricGroup, - isRasterDatasource, -} from "@seasketch/geoprocessing/client-core"; -import { clipToGeography } from "../util/clipToGeography.js"; -import { loadCog } from "@seasketch/geoprocessing/dataproviders"; -import { bbox } from "@turf/turf"; - -/** - * substrate: A geoprocessing function that calculates overlap metrics - * @param sketch - A sketch or collection of sketches - * @param extraParams - * @returns Calculated metrics and a null sketch - */ -export async function substrateWorker( - sketch: - | Sketch - | SketchCollection, - extraParams: { - geography: Geography; - metricGroup: MetricGroup; - }, -) { - const geography = extraParams.geography; - const metricGroup = extraParams.metricGroup; - - // Support sketches crossing antimeridian - const splitSketch = splitSketchAntimeridian(sketch); - - if (!metricGroup.datasourceId) - throw new Error(`Expected datasourceId for ${metricGroup.metricId}`); - - // Clip sketch to geography - const clippedSketch = await clipToGeography(splitSketch, geography); - - // Get bounding box of sketch remainder - const sketchBox = clippedSketch.bbox || bbox(clippedSketch); - - const ds = project.getDatasourceById(metricGroup.datasourceId); - if (!isRasterDatasource(ds)) - throw new Error(`Expected raster datasource for ${ds.datasourceId}`); - - const url = project.getDatasourceUrl(ds); - - // Start raster load and move on in loop while awaiting finish - const raster = await loadCog(url); - - // Start analysis when raster load finishes - const overlapResult = await rasterMetrics(raster, { - metricId: metricGroup.metricId, - feature: clippedSketch, - ...(ds.measurementType === "quantitative" && { stats: ["area"] }), - ...(ds.measurementType === "categorical" && { - categorical: true, - categoryMetricValues: metricGroup.classes.map((c) => c.classId), - }), - }); - - return overlapResult.map( - (metrics): Metric => ({ - ...metrics, - geographyId: geography.geographyId, - }), - ); -} - -export default new GeoprocessingHandler(substrateWorker, { - title: "substrateWorker", - description: "", - timeout: 500, // seconds - memory: 4096, // megabytes - executionMode: "sync", - // Specify any Sketch Class form attributes that are required - requiresProperties: [], -});